ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart36d07 |
|---|---|
| Clone Library Name | barley_pub |
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6| Length = 251 Score = 231 bits (589), Expect = 1e-60 Identities = 113/145 (77%), Positives = 120/145 (82%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MK NIANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEF+GY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLTPGRVRLLLHRGT CF CIVS DLSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 NDLPGLTD EKPRM+GPKRASKI+K Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRK 145
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1| Length = 250 Score = 231 bits (588), Expect = 1e-60 Identities = 112/145 (77%), Positives = 120/145 (82%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MK N+ANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEF+GY+FKI GGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLTPGRVRLLLHRGT CF CIVS DLSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 NDLPGLTDTEKPRM+GPKRASKI+K Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRK 145
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2| Length = 249 Score = 228 bits (580), Expect = 1e-59 Identities = 110/145 (75%), Positives = 120/145 (82%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MK N+ANPTTGCQKK+EIDDDQKLR +DKR+SQEV GD LGEEF+GY+FKIMGGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLTPGRVRLLLHRGT CF CIVS DLSV+NLVIVKKG Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 +DLPGLTDTEKPRM+GPKRASKI+K Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRK 145
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 172 bits (436), Expect = 5e-43 Identities = 86/145 (59%), Positives = 106/145 (73%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT PR GPKRAS+I+K Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRK 143
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 172 bits (436), Expect = 5e-43 Identities = 86/145 (59%), Positives = 106/145 (73%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT PR GPKRAS+I+K Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRK 143
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 172 bits (436), Expect = 5e-43 Identities = 86/145 (59%), Positives = 106/145 (73%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT PR GPKRAS+I+K Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRK 143
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 169 bits (427), Expect = 6e-42 Identities = 84/145 (57%), Positives = 105/145 (72%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++ +R Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT PR GPKRAS+I+K Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRK 143
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 167 bits (423), Expect = 2e-41 Identities = 82/145 (56%), Positives = 106/145 (73%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVI++KG+ Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTD+ PR GPKRAS+I+K Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRK 143
>RS6_XENLA (P39017) 40S ribosomal protein S6| Length = 249 Score = 166 bits (419), Expect = 5e-41 Identities = 82/145 (56%), Positives = 105/145 (72%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E++D++KLR Y+KR++ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIV+KG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTD PR GPKRAS+I+K Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRK 143
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6| Length = 249 Score = 166 bits (419), Expect = 5e-41 Identities = 83/145 (57%), Positives = 105/145 (72%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CI +LSV+NLVI+KKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTD+ PR GPKRASKI+K Sbjct: 119 KDIPGLTDSTVPRRLGPKRASKIRK 143
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6| Length = 247 Score = 164 bits (415), Expect = 1e-40 Identities = 83/145 (57%), Positives = 103/145 (71%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P TGCQK +E+DD++KLR YDKRIS E+ D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT RVRLLL + SC+ CIV +LSV++LVI+KKG+ Sbjct: 61 FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTD PR GPKRASKI+K Sbjct: 119 QDIPGLTDKTIPRRLGPKRASKIRK 143
>RS6_BRAFL (O01727) 40S ribosomal protein S6| Length = 244 Score = 164 bits (414), Expect = 2e-40 Identities = 80/145 (55%), Positives = 105/145 (72%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MK+NI+ P TGCQK +E+DD++KLR Y+KR+S ++ + LG+E++GY+ +I GG DKQG Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVI+KKG+ Sbjct: 61 FPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT PR GPKRA +I+K Sbjct: 119 QDIPGLTDTTIPRRLGPKRAGRIRK 143
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6| Length = 346 Score = 161 bits (407), Expect = 1e-39 Identities = 81/145 (55%), Positives = 100/145 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E++GY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT RVRLLL +G SC+ CIV Q+LS + L++VKKG+ Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT PR GPKRAS I+K Sbjct: 119 KDIPGLTDTTVPRRLGPKRASNIRK 143
>RS6_DROME (P29327) 40S ribosomal protein S6| Length = 248 Score = 157 bits (398), Expect = 1e-38 Identities = 80/145 (55%), Positives = 101/145 (69%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLN++ P TGCQK E+ D+ KLR Y+KR+ Q V D+LG+E++GY +I GG DKQG Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT GRVRLLL +G SC+ CIV ++SV+ LV++KKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT PR GPKRASKI+K Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRK 143
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6| Length = 349 Score = 157 bits (397), Expect = 2e-38 Identities = 80/145 (55%), Positives = 99/145 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E++GY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT RVRLLL +G SC+ CIV Q+LS + L++VKKG+ Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTDT R GPKRAS I+K Sbjct: 119 KDIPGLTDTTVLRRLGPKRASNIRK 143
>RS6_MANSE (Q94624) 40S ribosomal protein S6| Length = 253 Score = 154 bits (390), Expect = 1e-37 Identities = 78/145 (53%), Positives = 100/145 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV DLLG+E++GY+ ++ GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT RVRLL+ +G SC+ CIV +LSV+ LVIV+KG+ Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 ++PGLTD PR GPKRASKI+K Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRK 143
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6| Length = 236 Score = 154 bits (389), Expect = 2e-37 Identities = 77/145 (53%), Positives = 102/145 (70%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P G QK ++I+D+ KLR Y+KR+ QEV GD +G+EF+GYIF+I GG DKQG Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGV+ P RV+LLL +G SC+ CIV+QDL+V+ L +VK+G Sbjct: 61 FPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGD 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 +D+ GLTDT P+ GPKRA+ I+K Sbjct: 119 SDIEGLTDTTTPKRLGPKRANNIRK 143
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B| Length = 239 Score = 154 bits (388), Expect = 2e-37 Identities = 80/145 (55%), Positives = 97/145 (66%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPM QGVL P RVRLLL G C+ CIV QDL+V+ L IVK+G+ Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTD P+ GPKRASKI++ Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRR 143
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A| Length = 239 Score = 153 bits (387), Expect = 3e-37 Identities = 79/145 (54%), Positives = 97/145 (66%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPM QGVL P RVRLLL G C+ CIV QDL+V+ L I+K+G+ Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIIKQGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+PGLTD P+ GPKRASKI++ Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRR 143
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6| Length = 236 Score = 152 bits (385), Expect = 4e-37 Identities = 78/145 (53%), Positives = 99/145 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNIA P G QK VE+DD+ ++R YDKRI QE+ G+ +G+EF+GY FKI GG DKQG Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVL P RV+LLL +G SC+ IV DL+V++LVIVKKG+ Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 +L G+TD P+ GPKRA+ I+K Sbjct: 119 QELEGVTDATVPKRLGPKRANHIRK 143
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6| Length = 253 Score = 152 bits (385), Expect = 4e-37 Identities = 78/145 (53%), Positives = 99/145 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVLT RVRLL+ +G SC+ CIV +LSV+ LVIV+KG+ Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 ++PGLTD PR GPKRASKI+K Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRK 143
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6| Length = 246 Score = 152 bits (383), Expect = 8e-37 Identities = 77/145 (53%), Positives = 101/145 (69%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 M+LN A P TG QK E+D+++KLR ++KR+SQEV D LG+E++GY+ +I GG DKQG Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQG+LT GRVRLLL +G SC+ CIV ++S ++LVIVKKG Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKKGD 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 ++ GLTD+ PR GPKRASKI+K Sbjct: 119 GEIEGLTDSVLPRKLGPKRASKIRK 143
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)| Length = 236 Score = 150 bits (379), Expect = 2e-36 Identities = 77/145 (53%), Positives = 98/145 (67%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P G QK EIDD+ ++R +DKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVL P R++LLL + SC+ IV DL+V+ LVIVKKG+ Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 +L GLTDT P+ GPKRA+ I+K Sbjct: 119 QELEGLTDTTVPKRLGPKRANNIRK 143
>RS6_YARLI (Q6C169) 40S ribosomal protein S6| Length = 242 Score = 150 bits (378), Expect = 3e-36 Identities = 76/145 (52%), Positives = 98/145 (67%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNIA P G QK ++I+D+ ++R Y+KR+ QEV D LG+EF+GY+ KI GG DKQG Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGV+ P RVRLLL + +SC+ CIVS DLSV+++VIVK+G Sbjct: 61 FPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGD 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 D+ GLT PR GPKRA+ I+K Sbjct: 119 ADIEGLTTETVPRRLGPKRANNIRK 143
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)| Length = 235 Score = 149 bits (376), Expect = 5e-36 Identities = 77/145 (53%), Positives = 99/145 (68%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P G QK VEIDD+ ++R YDKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVL P RV+LL+ +GTSC+ IV DL+V+ LVIVKKG Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGD 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 ++ G+T+ P+ GPKRA+ I+K Sbjct: 119 QEIEGVTNETVPKRLGPKRANNIRK 143
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6| Length = 236 Score = 148 bits (374), Expect = 8e-36 Identities = 73/145 (50%), Positives = 98/145 (67%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P G QK +E+DD+ ++R YDKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVL P RV+LL+ +GTSC+ IV DL+V+ L+I KKG Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGD 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 ++ G+T+ P+ GPKRA+ I+K Sbjct: 119 QEIEGITNESVPKRLGPKRANNIRK 143
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6| Length = 236 Score = 145 bits (367), Expect = 5e-35 Identities = 74/145 (51%), Positives = 98/145 (67%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 MKLNI+ P G QK +EIDD+ ++R YDKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60 Query: 286 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 FPMKQGVL P RV+LLL +G SC+ IV DL+V+ L+I KKG+ Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGE 118 Query: 466 NDLPGLTDTEKPRMKGPKRASKIKK 540 ++ G+T+ P+ GPKRA+ I+K Sbjct: 119 QEIEGITNDTVPKRLGPKRANNIRK 143
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)| Length = 199 Score = 141 bits (355), Expect = 1e-33 Identities = 67/97 (69%), Positives = 75/97 (77%) Frame = +1 Query: 241 EGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVS 420 +GY+FKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGT CF CIVS Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60 Query: 421 QDLSVINLVIVKKGKNDLPGLTDTEKPRMKGPKRASK 531 DLSV+NLVIVKKG+NDLPGLTDTEKPRM+GP+ + Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQR 97
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6| Length = 249 Score = 121 bits (303), Expect = 1e-27 Identities = 65/146 (44%), Positives = 84/146 (57%), Gaps = 1/146 (0%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 282 MKLNIA P G K+ EI D+ R L D R+ EV G + G EF+GYIF++ GG DK Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 283 GFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 GFPM GVL RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 463 KNDLPGLTDTEKPRMKGPKRASKIKK 540 + G+TDT PR GPKRASKI+K Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRK 146
>RS6_LEIIN (O44012) 40S ribosomal protein S6| Length = 249 Score = 118 bits (296), Expect = 9e-27 Identities = 64/146 (43%), Positives = 83/146 (56%), Gaps = 1/146 (0%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 282 M LNIA P G K+ EI D+ R L D R+ EV G + G EF+GYIF++ GG DK Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 283 GFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 GFPM GVL RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 463 KNDLPGLTDTEKPRMKGPKRASKIKK 540 + G+TDT PR GPKRASKI+K Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRK 146
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6| Length = 203 Score = 83.6 bits (205), Expect = 3e-16 Identities = 49/129 (37%), Positives = 74/129 (57%) Frame = +1 Query: 154 EIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVRLL 333 EI+ ++R LYDK+I + G +LGEEFEG I +I GG D QGFPM G LT RVR L Sbjct: 3 EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPL 61 Query: 334 LHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMKG 513 L +G + + IVS+++ V+NL+I++ G+ ++ GLT+ Sbjct: 62 LSKGDAGYRCRRKGVRRRKSVRGS--IVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119 Query: 514 PKRASKIKK 540 P++ K++K Sbjct: 120 PRKEKKLRK 128
>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e| Length = 125 Score = 56.6 bits (135), Expect = 4e-08 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%) Frame = +1 Query: 103 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 255 T KL I++P TG K++EI + L KRI ++ + +L G+EF E Sbjct: 3 TFKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVKM 61 Query: 256 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 345 +I GG DK GFPM+ + P RVR+LL +G Sbjct: 62 EIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e| Length = 125 Score = 55.8 bits (133), Expect = 7e-08 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 9/90 (10%) Frame = +1 Query: 103 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFEGYI-F 255 T KL I+NP G K+VEI + + L +RI +E+ + ++ GEE Sbjct: 3 TFKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAKL 61 Query: 256 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 345 KI GG DK GFPM+ V P RV++LL RG Sbjct: 62 KITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e| Length = 125 Score = 54.7 bits (130), Expect = 2e-07 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%) Frame = +1 Query: 103 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 255 T KL I++P +G K+VEI + L KRI ++ + +L G+EF E Sbjct: 3 TFKLVISDPKSGIAKQVEITGAET-EKLIGKRIGDQIPAKELNINLNELFGKEFPEDVKL 61 Query: 256 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 345 +I GG DK GFPM+ + P RVR+LL +G Sbjct: 62 EIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 52.0 bits (123), Expect = 1e-06 Identities = 39/118 (33%), Positives = 56/118 (47%) Frame = +1 Query: 109 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 288 K+ +A+P +VE+ + L KRI + G+++G GY KI GG DK GF Sbjct: 5 KVVVADPEKARSYQVEVKGEDA-EKLIGKRIGDVIDGEIVG--LPGYKLKITGGTDKDGF 61 Query: 289 PMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 PM+ + P RVRLLL G F +S+D+ +N VIV+ G Sbjct: 62 PMRPDIHGPVRVRLLL-SGPPGFRPERKGERRRKTVRGNT--ISEDIVQVNTVIVEYG 116
>RS6E_PYRHO (O58349) 30S ribosomal protein S6e| Length = 125 Score = 50.1 bits (118), Expect = 4e-06 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 9/90 (10%) Frame = +1 Query: 103 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 255 T KL I++P +G K++EI L K+I ++ + L G++F E Sbjct: 3 TFKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVKM 61 Query: 256 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 345 +I GG DK GFPM+ + P RVR+LL +G Sbjct: 62 EIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_METTH (O26360) 30S ribosomal protein S6e| Length = 126 Score = 50.1 bits (118), Expect = 4e-06 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 8/125 (6%) Frame = +1 Query: 148 KVEIDDDQKLRNL-YDKRISQEVVGDLLGEEFEG-------YIFKIMGGCDKQGFPMKQG 303 KV I D +K + D S+ ++G +G+EF+G Y KI GG DK GFPMK+ Sbjct: 4 KVVISDKEKSVQMEVDPSESRGLIGLTIGDEFDGSIIGLSGYKLKITGGSDKNGFPMKKT 63 Query: 304 VLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDLPGL 483 V R+R L+ G +S D+ IN V+++KG+ L L Sbjct: 64 VPGARRIRSLVSGGVG---YKPRRDGERRRKTFRGNTISDDIVQINTVVIEKGEKPLEEL 120 Query: 484 TDTEK 498 ++ Sbjct: 121 LGADE 125
>RS6E_METJA (P54067) 30S ribosomal protein S6e| Length = 131 Score = 47.0 bits (110), Expect = 3e-05 Identities = 36/131 (27%), Positives = 58/131 (44%) Frame = +1 Query: 103 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 282 T K +A+P TG ++E D+ L K+I + G ++G EGY +I GG D Sbjct: 3 TAKFVVADPKTGRCYQIEADNTP----LVGKKIGEVFDGKIIG--LEGYKLQIRGGTDSS 56 Query: 283 GFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 462 GFPM+ + +VR+LL ++ D+ IN+ +V+ G Sbjct: 57 GFPMRPDIHGSRKVRVLLSAPPG---FKPKRKGERRRKTVRGNTIAPDIVQINVKVVEYG 113 Query: 463 KNDLPGLTDTE 495 + +P L E Sbjct: 114 EKSIPELLGLE 124
>RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e| Length = 127 Score = 45.1 bits (105), Expect = 1e-04 Identities = 36/119 (30%), Positives = 52/119 (43%) Frame = +1 Query: 118 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 297 IA+ TG K EID + + L +RI E+ G E GY KI GG GFPMK Sbjct: 6 IADKNTGKTYKKEIDQNV-IGLLTGRRIGDEIDGSFF--EMPGYKLKITGGSANNGFPMK 62 Query: 298 QGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDL 474 + + G+ R+L+ + IV D+S +N++I + G L Sbjct: 63 KDLPIAGKKRILI----TYTHGRKGKNGIRKRVTLRGNIVGSDISQLNMIITQYGPQPL 117
>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e| Length = 124 Score = 43.1 bits (100), Expect = 5e-04 Identities = 35/127 (27%), Positives = 56/127 (44%) Frame = +1 Query: 118 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 297 IA+P TG K EI + ++ +L ++I E+ G + GY + GG GFPM+ Sbjct: 4 IADPKTGKTYKKEIPAE-RMGSLVGRKIGDEIDGVFF--DLVGYKLVVTGGSSIDGFPMR 60 Query: 298 QGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDLP 477 + T G+ ++L+ S I+ D+S INL IV+ G L Sbjct: 61 SDLQTQGKKQILV----SYKKGYRGKNGIRKRITVRGSIIGSDISQINLKIVQYGPTPLE 116 Query: 478 GLTDTEK 498 D ++ Sbjct: 117 EKKDDQQ 123
>RS6E_ARCFU (O29739) 30S ribosomal protein S6e| Length = 129 Score = 41.6 bits (96), Expect = 0.001 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Frame = +1 Query: 118 IANPTTG--CQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFP 291 I++P TG QK VE L K+I + G ++ + Y KI GG D+ GFP Sbjct: 7 ISDPKTGRAYQKVVE---GANANRLIGKQIGDVISGTIVDLPPD-YELKITGGTDRDGFP 62 Query: 292 MKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 465 M+ + R RLLL G ++S+D+ IN V+VK GK Sbjct: 63 MRPDLPGTARRRLLLSGGVG---FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHGK 117
>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e| Length = 136 Score = 40.4 bits (93), Expect = 0.003 Identities = 27/79 (34%), Positives = 39/79 (49%) Frame = +1 Query: 109 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 288 K+ +++P G +++I D + L K I V G + G GY +I GGCD GF Sbjct: 5 KVVVSDPKEGRAYQIDIKDAEA-NALIGKAIGDVVDGAIFG--LAGYKVQITGGCDGSGF 61 Query: 289 PMKQGVLTPGRVRLLLHRG 345 MK + P R R+L G Sbjct: 62 VMKPDLPGPRRQRILTATG 80
>RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e| Length = 126 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/67 (34%), Positives = 38/67 (56%) Frame = +1 Query: 106 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 285 +K+ +++P +G ++E + Q L Y K+I + G +G +GY KI GG D G Sbjct: 7 VKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIG--LDGYELKITGGSDIAG 61 Query: 286 FPMKQGV 306 FPM++ V Sbjct: 62 FPMRKEV 68
>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e| Length = 136 Score = 38.9 bits (89), Expect = 0.009 Identities = 26/79 (32%), Positives = 38/79 (48%) Frame = +1 Query: 109 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 288 K+ +++P +++I D + L K I V G + G GY +I GGCD GF Sbjct: 5 KVVVSDPKEARAYQIDIKDAEA-NALIGKSIGDVVDGSIFG--LAGYKVQITGGCDGSGF 61 Query: 289 PMKQGVLTPGRVRLLLHRG 345 MK + P R R+L G Sbjct: 62 VMKPDLPGPRRQRILTATG 80
>RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e| Length = 131 Score = 36.6 bits (83), Expect = 0.047 Identities = 24/81 (29%), Positives = 39/81 (48%) Frame = +1 Query: 103 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 282 T ++ +A+P +G + E+D Q + I V G +G +GY +I GG D Sbjct: 3 TFQVAVADPESGRTYQFEVDG-QDANRFIGREIGAAVDGGAVG--LDGYTVEITGGSDDA 59 Query: 283 GFPMKQGVLTPGRVRLLLHRG 345 G PM++ V + +LL G Sbjct: 60 GRPMREDVDGSDLMEVLLEGG 80
>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e| Length = 245 Score = 34.3 bits (77), Expect = 0.23 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = +1 Query: 148 KVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVR 327 ++ + DD ++ L I G L+G G FKI GG D G PM GV GR + Sbjct: 136 QIAVPDDVHVK-LAGLEIGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYK 192 Query: 328 LLL 336 +LL Sbjct: 193 VLL 195
>RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)| Length = 128 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +1 Query: 118 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 297 +++P G ++++D Q + + EV G +G +GY ++ GG D G PM+ Sbjct: 7 VSDPEDGHTYQIDVDG-QDANRFIGRELGDEVDGGAVG--LDGYSLELTGGSDTSGRPMR 63 Query: 298 QGV 306 V Sbjct: 64 PDV 66
>APSA_EMENI (Q00083) Anucleate primary sterigmata protein A| Length = 1676 Score = 31.6 bits (70), Expect = 1.5 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 10/83 (12%) Frame = -3 Query: 537 LDLGSPFGSLHPGLL---SVSQAWQIILALLDNHQVDNR*ILADNATTNRLPPA------ 385 L LG+ G+ P S +QA Q +L + Q+D +L D A+ L P Sbjct: 1175 LPLGAISGNAAPRRARSGSSNQADQGAQTILSSKQIDQ--LLIDRASVRPLSPPDSDKLN 1232 Query: 384 -LTNTPAMSTKARCAPVKQKANA 319 ++N+P + KAR PV Q +NA Sbjct: 1233 EMSNSPFATPKARSRPVPQASNA 1255
>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e| Length = 213 Score = 31.2 bits (69), Expect = 2.0 Identities = 27/98 (27%), Positives = 41/98 (41%) Frame = +1 Query: 163 DDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR 342 D KL N+ +I + ++ G + KI GG D GFPM+ V G R LL Sbjct: 122 DQSKLSNIIGAKIGDVIELNVSGIPLK---VKITGGSDNSGFPMRYDV-PGGAKRKLLLS 177 Query: 343 GTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 456 G F +++QD+ IN +I++ Sbjct: 178 GPPGFYPEEDGMRRKKTVRGN--MITQDIVQINTIIIR 213
>POMA_VIBAL (O06873) Chemotaxis protein pomA| Length = 253 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Frame = +2 Query: 311 LLGAFAFCFTGAHLA-----FVDMAGVLVSAGGSLFVVAL 415 L+G FAF L FVD+ +L+ GGS+FVV + Sbjct: 9 LIGGFAFVIMAMVLGGSIGMFVDVTSILIVVGGSIFVVLM 48
>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e| Length = 214 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Frame = +1 Query: 190 DKRISQEVVGDLLGEEFEG-------YIFKIMGGCDKQGFPMKQGVLTPGRVRLLL 336 D+ + +VG +G+ FE KI GG D GFPM+ V+ + ++LL Sbjct: 122 DQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSGFPMRFDVIGAAKRKILL 177
>Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c| Length = 163 Score = 29.6 bits (65), Expect = 5.7 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +1 Query: 145 KKVEIDDDQKLRNLYDKRISQEVVGDLLGEE 237 +KV D +QK+R+ YD +S V+G+L+ +E Sbjct: 85 EKVVNDIEQKIRSDYDSEVSSVVIGNLVMDE 115
>PTGA_BACHD (Q9KCQ4) Glucose-specific phosphotransferase enzyme IIA component| (EC 2.7.1.-) (PTS system glucose-specific EIIA component) (EIIA-Glc) (EIII-Glc) Length = 173 Score = 29.3 bits (64), Expect = 7.5 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +1 Query: 175 LRNLYDKRISQEVVGDLLG-EEFEGYIFKIMGGCDKQGFPMKQ--GVLTPGRVRLLLHRG 345 + ++ D +Q+++GD + +G++ + G Q FP K G+ TPG LL+H G Sbjct: 35 IEDVPDPTFAQKMMGDGFAIDPRDGHVVAPVAGEIVQVFPTKHAVGIKTPGGAELLIHIG 94
>GPX42_MOUSE (Q91XR9) Phospholipid hydroperoxide glutathione peroxidase, nuclear| (EC 1.11.1.12) (GPX-4) Length = 253 Score = 28.9 bits (63), Expect = 9.7 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = -1 Query: 389 RRSPTRLPCPRKQDVPL*SRRRTRPGVSTPC---FIGKPCLSQPP 264 R+SP + P PR++ RRR RP P F P L +PP Sbjct: 29 RQSPRKRPGPRRRKARARRRRRARPRRMEPIPEPFNPGPLLQEPP 73
>POLG_HCVIN (Q913D4) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3010 Score = 28.9 bits (63), Expect = 9.7 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 524 ALLGPFILGFSVSVRPGRSFLPFLTITKLITDRSWLTMQPRTDFLRRSPTRLPC 363 A G I G VS R GR L L +TD+ W + P T + +++ L C Sbjct: 990 AACGDIINGLPVSARRGREVL--LGPADALTDKGWRLLAPITAYAQQTRGLLGC 1041
>POLG_HCVH9 (Q81754) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3010 Score = 28.9 bits (63), Expect = 9.7 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 524 ALLGPFILGFSVSVRPGRSFLPFLTITKLITDRSWLTMQPRTDFLRRSPTRLPC 363 A G I G VS R GR L L +TD+ W + P T + +++ L C Sbjct: 990 AACGDIINGLPVSARRGREVL--LGPADALTDKGWRLLAPITAYAQQTRGLLGC 1041 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,424,678 Number of Sequences: 219361 Number of extensions: 1295413 Number of successful extensions: 3977 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 3812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3940 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
