Clone Name | bart36d07 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 436 bits (220), Expect = e-119 Identities = 409/472 (86%) Strand = Plus / Plus Query: 71 gctcgcggcccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaacccca 130 |||||| ||||||||||| |||| || | ||||||||||| |||||||||||||| | Sbjct: 57 gctcgccgcccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccga 116 Query: 131 ccacggggtgccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatg 190 |||| ||||||||||||||| | |||||||||||||||||||||||||| ||| || Sbjct: 117 ccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttg 176 Query: 191 acaagagaatctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctata 250 ||||||| ||||| |||||||| ||| ||| |||||| ||||||||| |||||||| Sbjct: 177 acaagaggatctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatg 236 Query: 251 tcttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaa 310 |||||||||||||||| || || || |||||||| ||||| |||||||| |||||||| | Sbjct: 237 tcttcaagatcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctca 296 Query: 311 ctcctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggca 370 || |||| || || |||||||| ||||||||||||||| ||||||| ||||| |||||| Sbjct: 297 ctgctggacgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggca 356 Query: 371 ggcgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctat 430 |||||| |||||||||| ||||||||||||| ||||||||||| |||||||| || |||| Sbjct: 357 ggcgtgatggtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctat 416 Query: 431 ctgttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgaca 490 ||||||| ||||||||||||||||||||||| ||||||| ||||| ||||| ||||||| Sbjct: 417 ctgttattaacttggtgattgtcaagaagggtgagaatgacctgcctggccttactgaca 476 Query: 491 ctgagaagcccaggatgaagggacccaaaagggcttccaagatcaagaagct 542 |||||||||||||||||| ||||||||| ||||| |||||||||| |||||| Sbjct: 477 ctgagaagcccaggatgaggggacccaagagggcctccaagatcaggaagct 528
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full insert sequence Length = 1078 Score = 436 bits (220), Expect = e-119 Identities = 409/472 (86%) Strand = Plus / Plus Query: 71 gctcgcggcccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaacccca 130 |||||| ||||||||||| |||| || | ||||||||||| |||||||||||||| | Sbjct: 58 gctcgccgcccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccga 117 Query: 131 ccacggggtgccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatg 190 |||| ||||||||||||||| | |||||||||||||||||||||||||| ||| || Sbjct: 118 ccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttg 177 Query: 191 acaagagaatctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctata 250 ||||||| ||||| |||||||| ||| ||| |||||| ||||||||| |||||||| Sbjct: 178 acaagaggatctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatg 237 Query: 251 tcttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaa 310 |||||||||||||||| || || || |||||||| ||||| |||||||| |||||||| | Sbjct: 238 tcttcaagatcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctca 297 Query: 311 ctcctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggca 370 || |||| || || |||||||| ||||||||||||||| ||||||| ||||| |||||| Sbjct: 298 ctgctggacgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggca 357 Query: 371 ggcgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctat 430 |||||| |||||||||| ||||||||||||| ||||||||||| |||||||| || |||| Sbjct: 358 ggcgtgatggtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctat 417 Query: 431 ctgttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgaca 490 ||||||| ||||||||||||||||||||||| ||||||| ||||| ||||| ||||||| Sbjct: 418 ctgttattaacttggtgattgtcaagaagggtgagaatgacctgcctggccttactgaca 477 Query: 491 ctgagaagcccaggatgaagggacccaaaagggcttccaagatcaagaagct 542 |||||||||||||||||| ||||||||| ||||| |||||||||| |||||| Sbjct: 478 ctgagaagcccaggatgaggggacccaagagggcctccaagatcaggaagct 529
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds Length = 1039 Score = 369 bits (186), Expect = 6e-99 Identities = 372/434 (85%) Strand = Plus / Plus Query: 102 caccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcga 161 |||||||||||| |||||||||||||| |||| |||||||| |||||| |||| ||||| Sbjct: 66 caccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcga 125 Query: 162 tgacgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtga 221 |||||||||||||||||| | |||||||| || || ||||||||||| |||||| Sbjct: 126 tgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtga 185 Query: 222 tcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagca 281 | |||||||||||| ||| |||| ||| ||||||||||||||||||| || || ||||| Sbjct: 186 tgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagca 245 Query: 282 gggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacag 341 ||||||||||||||||||||||| | ||| |||| || ||||| |||||||| || || Sbjct: 246 aggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatag 305 Query: 342 gggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgt 401 ||| || | ||||| ||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 306 ggggactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgt 365 Query: 402 tcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaaggg 461 ||||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 366 ccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaaggg 425 Query: 462 caagaatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaag 521 ||||||||||||| || |||||||||||||||||||| ||||||| ||| ||||| || Sbjct: 426 tgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 485 Query: 522 ggcttccaagatca 535 ||| |||||||||| Sbjct: 486 ggcctccaagatca 499
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 355 bits (179), Expect = 1e-94 Identities = 374/439 (85%) Strand = Plus / Plus Query: 104 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 163 |||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||||||| Sbjct: 40 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 99 Query: 164 acgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatc 223 ||||||||||||| || ||||||||||||| ||||||||||| || ||||||| Sbjct: 100 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 159 Query: 224 ttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagg 283 ||| || || |||||| |||||||| | |||||||||||||| ||||| || ||||| | Sbjct: 160 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 219 Query: 284 gcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggg 343 | ||||| |||||||| || ||||| ||| |||| || || |||||||| || ||||||| Sbjct: 220 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 279 Query: 344 gcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttc 403 | || | ||||| |||||| |||||||||||| |||||||||| | |||||||| || | Sbjct: 280 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 339 Query: 404 gtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggca 463 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 340 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtg 399 Query: 464 agaatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaaggg 523 | ||||| || || ||| ||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 400 ataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 459 Query: 524 cttccaagatcaagaagct 542 | || ||||||| |||||| Sbjct: 460 catctaagatcaggaagct 478
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full insert sequence Length = 1018 Score = 355 bits (179), Expect = 1e-94 Identities = 374/439 (85%) Strand = Plus / Plus Query: 104 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 163 |||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||||||| Sbjct: 38 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 97 Query: 164 acgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatc 223 ||||||||||||| || ||||||||||||| ||||||||||| || ||||||| Sbjct: 98 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 157 Query: 224 ttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagg 283 ||| || || |||||| |||||||| | |||||||||||||| ||||| || ||||| | Sbjct: 158 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 217 Query: 284 gcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggg 343 | ||||| |||||||| || ||||| ||| |||| || || |||||||| || ||||||| Sbjct: 218 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 277 Query: 344 gcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttc 403 | || | ||||| |||||| |||||||||||| |||||||||| | |||||||| || | Sbjct: 278 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 337 Query: 404 gtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggca 463 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 338 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtg 397 Query: 464 agaatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaaggg 523 | ||||| || || ||| ||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 398 ataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 457 Query: 524 cttccaagatcaagaagct 542 | || ||||||| |||||| Sbjct: 458 catctaagatcaggaagct 476
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full insert sequence Length = 990 Score = 355 bits (179), Expect = 1e-94 Identities = 374/439 (85%) Strand = Plus / Plus Query: 104 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 163 |||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||||||| Sbjct: 37 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 96 Query: 164 acgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatc 223 ||||||||||||| || ||||||||||||| ||||||||||| || ||||||| Sbjct: 97 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 156 Query: 224 ttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagg 283 ||| || || |||||| |||||||| | |||||||||||||| ||||| || ||||| | Sbjct: 157 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 216 Query: 284 gcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggg 343 | ||||| |||||||| || ||||| ||| |||| || || |||||||| || ||||||| Sbjct: 217 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 276 Query: 344 gcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttc 403 | || | ||||| |||||| |||||||||||| |||||||||| | |||||||| || | Sbjct: 277 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 336 Query: 404 gtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggca 463 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 337 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtg 396 Query: 464 agaatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaaggg 523 | ||||| || || ||| ||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 397 ataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 456 Query: 524 cttccaagatcaagaagct 542 | || ||||||| |||||| Sbjct: 457 catctaagatcaggaagct 475
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds Length = 1023 Score = 347 bits (175), Expect = 2e-92 Identities = 391/463 (84%) Strand = Plus / Plus Query: 80 ccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaaccccaccacggggt 139 ||||||||| |||| ||||| |||||||||||| |||||||||||||| | || |||| Sbjct: 43 ccgcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgtctaccgggt 102 Query: 140 gccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatgacaagagaa 199 ||||||||||| |||| ||||||||||||||||| || || | |||||||| || | Sbjct: 103 gccagaagaagctggaaatcgatgacgaccagaaactacgtgccttttatgaccgaagga 162 Query: 200 tctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctatatcttcaaga 259 ||||||||||||| ||||||| |||||||||||| || |||| ||| ||||||||| Sbjct: 163 tctcccaggaggtcagtggtgatgctctgggtgaggagtttaagggttatgtcttcaaga 222 Query: 260 tcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaactcctgggc 319 |||||||||| || || || || ||||||||||||||||||||||| || ||| |||| | Sbjct: 223 tcatgggtggatgtgacaaacaaggcttcccaatgaagcaaggagttctgacttctggtc 282 Query: 320 gcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcaggcgtgttg 379 | || ||||||||||| ||||| ||||| | ||||| || || ||||||||||| || Sbjct: 283 gtgtccgccttctgctccacagaggcactccctgcttccgcggttatggcaggcgtaatg 342 Query: 380 gtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatctgttatca 439 |||||||| ||||||||||||| |||||||| ||||| |||||||| ||||||||||||| Sbjct: 343 gtgagcgcaggaggaagtctgtccgtggttgtattgtgagccaagacctatctgttatca 402 Query: 440 acttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacactgagaagc 499 ||||||| ||||| |||||||| |||| |||||||| || | |||||||||||||||| Sbjct: 403 acttggtaattgttaagaagggtgagaacgatctgcctggtttaactgacactgagaagc 462 Query: 500 ccaggatgaagggacccaaaagggcttccaagatcaagaagct 542 | ||||||| ||| ||||||||||| |||||||||| |||||| Sbjct: 463 caaggatgaggggtcccaaaagggcctccaagatcaggaagct 505
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence Length = 1198 Score = 347 bits (175), Expect = 2e-92 Identities = 391/463 (84%) Strand = Plus / Plus Query: 80 ccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaaccccaccacggggt 139 ||||||||| |||| ||||| |||||||||||| |||||||||||||| | || |||| Sbjct: 171 ccgcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgtctaccgggt 230 Query: 140 gccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatgacaagagaa 199 ||||||||||| |||| ||||||||||||||||| || || | |||||||| || | Sbjct: 231 gccagaagaagctggaaatcgatgacgaccagaaactacgtgccttttatgaccgaagga 290 Query: 200 tctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctatatcttcaaga 259 ||||||||||||| ||||||| |||||||||||| || |||| ||| ||||||||| Sbjct: 291 tctcccaggaggtcagtggtgatgctctgggtgaggagtttaagggttatgtcttcaaga 350 Query: 260 tcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaactcctgggc 319 |||||||||| || || || || ||||||||||||||||||||||| || ||| |||| | Sbjct: 351 tcatgggtggatgtgacaaacaaggcttcccaatgaagcaaggagttctgacttctggtc 410 Query: 320 gcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcaggcgtgttg 379 | || ||||||||||| ||||| ||||| | ||||| || || ||||||||||| || Sbjct: 411 gtgtccgccttctgctccacagaggcactccctgcttccgcggttatggcaggcgtaatg 470 Query: 380 gtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatctgttatca 439 |||||||| ||||||||||||| |||||||| ||||| |||||||| ||||||||||||| Sbjct: 471 gtgagcgcaggaggaagtctgtccgtggttgtattgtgagccaagacctatctgttatca 530 Query: 440 acttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacactgagaagc 499 ||||||| ||||| |||||||| |||| |||||||| || | |||||||||||||||| Sbjct: 531 acttggtaattgttaagaagggtgagaacgatctgcctggtttaactgacactgagaagc 590 Query: 500 ccaggatgaagggacccaaaagggcttccaagatcaagaagct 542 | ||||||| ||| ||||||||||| |||||||||| |||||| Sbjct: 591 caaggatgaggggtcccaaaagggcctccaagatcaggaagct 633
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 238 bits (120), Expect = 2e-59 Identities = 180/200 (90%) Strand = Plus / Plus Query: 343 ggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgtt 402 |||||| ||||||| ||||| |||||||||||| |||||||||| ||||||||||||| Sbjct: 25670871 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 25670930 Query: 403 cgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggc 462 ||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 25670931 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 25670990 Query: 463 aagaatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagg 522 ||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||| ||| Sbjct: 25670991 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 25671050 Query: 523 gcttccaagatcaagaagct 542 || |||||||||| |||||| Sbjct: 25671051 gcctccaagatcaggaagct 25671070 Score = 103 bits (52), Expect = 6e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 |||||||| |||||||| |||||||||||||||| || || || |||||||| ||||| | Sbjct: 25670681 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 25670740 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 344 ||||||| |||||||| ||| |||| || || |||||||| ||||||||||| Sbjct: 25670741 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 25670792 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 110 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 169 |||| |||||||||||||| ||||| ||||||||||||||| | |||||||||||||||| Sbjct: 25669518 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 25669577 Query: 170 agaagctg 177 |||||||| Sbjct: 25669578 agaagctg 25669585
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 238 bits (120), Expect = 2e-59 Identities = 180/200 (90%) Strand = Plus / Plus Query: 343 ggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgtt 402 |||||| ||||||| ||||| |||||||||||| |||||||||| ||||||||||||| Sbjct: 124844 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 124903 Query: 403 cgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggc 462 ||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 124904 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 124963 Query: 463 aagaatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagg 522 ||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||| ||| Sbjct: 124964 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 125023 Query: 523 gcttccaagatcaagaagct 542 || |||||||||| |||||| Sbjct: 125024 gcctccaagatcaggaagct 125043 Score = 103 bits (52), Expect = 6e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 |||||||| |||||||| |||||||||||||||| || || || |||||||| ||||| | Sbjct: 124654 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 124713 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 344 ||||||| |||||||| ||| |||| || || |||||||| ||||||||||| Sbjct: 124714 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 124765 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 110 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 169 |||| |||||||||||||| ||||| ||||||||||||||| | |||||||||||||||| Sbjct: 123491 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 123550 Query: 170 agaagctg 177 |||||||| Sbjct: 123551 agaagctg 123558
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 212 bits (107), Expect = 9e-52 Identities = 170/191 (89%) Strand = Plus / Minus Query: 352 tgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgc 411 ||||| |||||| |||||||||||| |||||||||| | |||||||| || ||||||||| Sbjct: 15461353 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15461294 Query: 412 attgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaagaatgat 471 ||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||| Sbjct: 15461293 attgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgac 15461234 Query: 472 ctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagggcttccaag 531 || || ||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||| Sbjct: 15461233 cttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatctaag 15461174 Query: 532 atcaagaagct 542 |||| |||||| Sbjct: 15461173 atcaggaagct 15461163 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 110 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 169 |||| |||||||| ||||| ||||| ||||||||||||||| | |||||||||||||||| Sbjct: 15462534 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15462475 Query: 170 agaagctg 177 |||||||| Sbjct: 15462474 agaagctg 15462467 Score = 79.8 bits (40), Expect = 9e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 |||||||| |||||||| | |||||||||||||| ||||| || ||||| || ||||| | Sbjct: 15461567 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15461508 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 344 ||||||| || ||||| ||| |||| || || |||||||| || |||||||| Sbjct: 15461507 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15461456 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 tttatgacaagagaatctcccagga 209 ||||||||||||| ||||||||||| Sbjct: 15461701 tttatgacaagaggatctcccagga 15461677
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 212 bits (107), Expect = 9e-52 Identities = 170/191 (89%) Strand = Plus / Plus Query: 352 tgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgc 411 ||||| |||||| |||||||||||| |||||||||| | |||||||| || ||||||||| Sbjct: 40173 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 40232 Query: 412 attgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaagaatgat 471 ||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||| Sbjct: 40233 attgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgac 40292 Query: 472 ctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagggcttccaag 531 || || ||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||| Sbjct: 40293 cttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatctaag 40352 Query: 532 atcaagaagct 542 |||| |||||| Sbjct: 40353 atcaggaagct 40363 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 110 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 169 |||| |||||||| ||||| ||||| ||||||||||||||| | |||||||||||||||| Sbjct: 38992 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 39051 Query: 170 agaagctg 177 |||||||| Sbjct: 39052 agaagctg 39059 Score = 79.8 bits (40), Expect = 9e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 |||||||| |||||||| | |||||||||||||| ||||| || ||||| || ||||| | Sbjct: 39959 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 40018 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 344 ||||||| || ||||| ||| |||| || || |||||||| || |||||||| Sbjct: 40019 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 40070 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 tttatgacaagagaatctcccagga 209 ||||||||||||| ||||||||||| Sbjct: 39825 tttatgacaagaggatctcccagga 39849
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 212 bits (107), Expect = 9e-52 Identities = 170/191 (89%) Strand = Plus / Minus Query: 352 tgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgc 411 ||||| |||||| |||||||||||| |||||||||| | |||||||| || ||||||||| Sbjct: 15455887 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15455828 Query: 412 attgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaagaatgat 471 ||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||| Sbjct: 15455827 attgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgac 15455768 Query: 472 ctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagggcttccaag 531 || || ||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||| Sbjct: 15455767 cttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatctaag 15455708 Query: 532 atcaagaagct 542 |||| |||||| Sbjct: 15455707 atcaggaagct 15455697 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 110 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 169 |||| |||||||| ||||| ||||| ||||||||||||||| | |||||||||||||||| Sbjct: 15457068 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15457009 Query: 170 agaagctg 177 |||||||| Sbjct: 15457008 agaagctg 15457001 Score = 79.8 bits (40), Expect = 9e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 |||||||| |||||||| | |||||||||||||| ||||| || ||||| || ||||| | Sbjct: 15456101 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15456042 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 344 ||||||| || ||||| ||| |||| || || |||||||| || |||||||| Sbjct: 15456041 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15455990 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 tttatgacaagagaatctcccagga 209 ||||||||||||| ||||||||||| Sbjct: 15456235 tttatgacaagaggatctcccagga 15456211
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete cds Length = 1032 Score = 208 bits (105), Expect = 1e-50 Identities = 354/437 (81%) Strand = Plus / Plus Query: 106 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 165 |||||||| ||||| |||||||| || || ||||||||||||||| | ||||||||||| Sbjct: 52 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 111 Query: 166 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 225 |||||||| || ||| | ||||||||||| |||||||||||||| || ||| | Sbjct: 112 gaccagaaactccgagctttctatgacaagaggatctcccaggaggttagcggagatgct 171 Query: 226 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 285 |||| ||||| ||| |||| || | |||||||| ||||| || || || ||||| || Sbjct: 172 ttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaaggt 231 Query: 286 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 345 |||||||||||||| |||||| ||||||| || || ||||| ||||||||| |||| ||| Sbjct: 232 ttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgctttacagaggc 291 Query: 346 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 405 || ||||||| ||||| ||||| |||||| ||||||||| | ||||||||||| ||| Sbjct: 292 actccttgcttccgtggtcatggtaggcgtaatggtgagcgaagaaggaagtctgtccgt 351 Query: 406 ggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaag 465 || ||||| ||||| | || || || ||| | || ||||| ||||| |||||||| || Sbjct: 352 ggatgcatcgtcagtcctgacctttcagttctgaatttggttattgtgaagaagggtgag 411 Query: 466 aatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagggct 525 ||||||||||| || ||||| |||||||| || || ||||||| || |||||||||||| Sbjct: 412 aatgatctgcccggactgacagacactgaaaaacctaggatgagaggtcccaaaagggct 471 Query: 526 tccaagatcaagaagct 542 |||||||| | |||||| Sbjct: 472 tccaagattaggaagct 488
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence Length = 1065 Score = 190 bits (96), Expect = 3e-45 Identities = 345/428 (80%) Strand = Plus / Plus Query: 106 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 165 |||||||| ||||| |||||||| || || ||||||||||||||| | ||||||||||| Sbjct: 72 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 131 Query: 166 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 225 |||||||| || ||| | | ||||||||| |||||||||||||| || ||| | Sbjct: 132 gaccagaaactccgagctttctttgacaagaggatctcccaggaggttagcggagatgct 191 Query: 226 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 285 |||| ||||| ||| |||| || | |||||||| ||||| || || || ||||| || Sbjct: 192 ttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaaggt 251 Query: 286 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 345 |||||||||||||| |||||| ||||||| || || ||||| |||||||||||||| ||| Sbjct: 252 ttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgcttcacagaggc 311 Query: 346 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 405 || ||||||| ||||| |||| |||||| |||||| | || ||||||||||| ||| Sbjct: 312 actccttgcttccgtggttatggtaggcgtaatggtgaaagacgaaggaagtctgtccgt 371 Query: 406 ggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaag 465 || ||||||||||| | || || || ||| | || ||||| ||||| |||||||| || Sbjct: 372 ggatgcattgtcagtcctgacctttcagttctgaatttggttattgtgaagaagggagag 431 Query: 466 aatgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagggct 525 |||||||| || || ||||| |||||||| || || || |||| ||||||||||||||| Sbjct: 432 aatgatcttcctggactgacagacactgaaaaacctagaatgagaggacccaaaagggct 491 Query: 526 tccaagat 533 |||||||| Sbjct: 492 tccaagat 499
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence Length = 1067 Score = 184 bits (93), Expect = 2e-43 Identities = 255/309 (82%) Strand = Plus / Plus Query: 227 tgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggct 286 |||||||||| ||| |||| || | |||||||| ||||| || || || ||||| || | Sbjct: 185 tgggtgaggagttcaagggttacgttttcaagataatgggaggatgtgacaagcaagggt 244 Query: 287 tcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggca 346 |||| ||||| || |||||| |||||||||| || ||||||||| |||| ||||| || | Sbjct: 245 tccctatgaaacagggagtgttaactcctggccgtgttcgccttttgctccacagaggta 304 Query: 347 catcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtg 406 | ||||||| ||||| |||| ||||| ||| |||||| | ||||||||||| |||| Sbjct: 305 ctccttgcttccgtggttatggtaggcgaaatggagagcgcagaaggaagtctgtccgtg 364 Query: 407 gttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaaga 466 | ||||||||||||| ||||| |||||| | ||| |||| ||||| |||||||| ||| Sbjct: 365 gatgcattgtcagccctgatctttctgttttgaacctggttattgttaagaagggggaga 424 Query: 467 atgatctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagggctt 526 |||||||||| || ||||| |||||||| ||||| ||||||| |||||||||||||||| Sbjct: 425 atgatctgcctggactgaccgacactgaaaagccaaggatgagaggacccaaaagggctt 484 Query: 527 ccaagatca 535 ||||||||| Sbjct: 485 ccaagatca 493 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 106 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 165 |||||||| ||||| ||||| |||||||| ||||||||||| ||| | || |||||||| Sbjct: 64 atgaagttcaacattgcgaatcccaccactgggtgccagaaaaagcttgaaatcgatgat 123 Query: 166 gaccagaa 173 || ||||| Sbjct: 124 gatcagaa 131
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA Length = 1056 Score = 172 bits (87), Expect = 8e-40 Identities = 234/283 (82%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||| ||||| || || || ||||| || |||||||||||||| |||||| ||||| Sbjct: 195 ttcaagataatgggaggatgtgacaagcaagggttcccaatgaagcagggagtgttaact 254 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 ||||| || ||||||||| |||| |||| || || ||||||| ||||| ||||| ||| Sbjct: 255 cctggccgtgttcgccttttgctctacagaggtactccttgcttccgtggtcatggtagg 314 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 || ||| |||||| | ||||||||||| ||||| ||||||||||||| ||||| ||| Sbjct: 315 cgaaatggagagcgcagaaggaagtctgtccgtggatgcattgtcagccctgatctttct 374 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | ||| |||| ||||| || ||||| ||||||||||||| || || || ||||| Sbjct: 375 gttttgaacctggttattgttaaaaagggggagaatgatctgcctggactcaccgacacc 434 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatca 535 || ||||| ||||||| ||||||||||||||||||||||||| Sbjct: 435 gaaaagccaaggatgagaggacccaaaagggcttccaagatca 477
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds Length = 1020 Score = 165 bits (83), Expect = 2e-37 Identities = 323/403 (80%) Strand = Plus / Plus Query: 106 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 165 |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| ||| Sbjct: 63 atgaagttcaacatcgcgaatcccaccactggatgccagaagaagctcgagatcgacgac 122 Query: 166 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 225 || | ||| |||||| ||| |||||||| ||||| |||||||| | || ||| Sbjct: 123 gatctgaaactgcgagcattttgggacaagaggatctcacaggaggtcatcggagatgca 182 Query: 226 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 285 || ||||||||||| |||||||| ||||||| || | || || || || || || || Sbjct: 183 ctcggtgaggaatttaagggctatgtcttcaaaattaccggaggttgtgacaaacaagga 242 Query: 286 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 345 || ||||||||||| |||||||| |||||||| || ||| | ||| ||||||||||||| Sbjct: 243 tttccaatgaagcagggagtgctgactcctggtcgtgttagacttttgcttcacagggga 302 Query: 346 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 405 || ||||||| |||||| |||| |||||| ||| ||||| |||| |||||||||||| Sbjct: 303 actccttgcttccgtggatatggaaggcgtaatggagagcgtaggagaaagtctgttcgt 362 Query: 406 ggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaag 465 || ||||||||||||| ||| || |||||| | |||||| | ||||| ||||| || || Sbjct: 363 gggtgcattgtcagcccagacctctctgttttgaacttgataattgtgaagaaaggtgag 422 Query: 466 aatgatctgccaggcctgactgacactgagaagcccaggatga 508 |||||| | ||||| ||||||| ||||||||| ||||||| Sbjct: 423 aatgatttaccaggattgactgatgttgagaagccaaggatga 465
>dbj|D78497.1| Brassica rapa mRNA for putative ribosomal protein, partial cds Length = 426 Score = 155 bits (78), Expect = 2e-34 Identities = 231/282 (81%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 ||||||||||||||||| || || ||||| || ||||| |||||||| ||||| ||||| Sbjct: 97 ttcaagatcatgggtgggtgtgacaagcaaggtttccctatgaagcagggagttttaact 156 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 ||||| || ||||||||| |||||||| | || || |||||||| | |||||||| ||| Sbjct: 157 cctggccgtgttcgccttttgcttcaccgaggaactccttgctttagaggacatgggagg 216 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | ||| ||| | | || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 217 aggactggagagaggagaagaaagtctgttcgtggttgcattgtcagccaagatctctct 276 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| ||||| | || |||||||||||||| |||| ||||| || || || || || || Sbjct: 277 gttctcaaccttgtcattgtcaagaagggtgagaaggatcttcccgggcttaccgatacc 336 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatc 534 |||||||| ||||||| |||||| || || || ||||||||| Sbjct: 337 gagaagccaaggatgaggggacctaagagagcgtccaagatc 378
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome AT4G31700 (RPS6) mRNA, complete cds Length = 993 Score = 107 bits (54), Expect = 4e-20 Identities = 225/282 (79%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 159 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 218 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 || || || ||||||||| |||||||| | || || ||||||| | |||||||| ||| Sbjct: 219 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 278 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | ||||||| | | || ||||||||||||||||||||||| |||| ||||| ||| Sbjct: 279 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 338 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | ||| | || ||||| |||||||| |||| ||||| || || || || || ||| Sbjct: 339 gttctgaaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatact 398 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatc 534 |||||||| || |||| ||||| || || || ||||||||| Sbjct: 399 gagaagccaagaatgagaggaccaaagagagcctccaagatc 440
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 962 Score = 107 bits (54), Expect = 4e-20 Identities = 225/282 (79%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 161 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 220 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 || || || ||||||||| |||||||| | || || ||||||| | |||||||| ||| Sbjct: 221 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 280 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | ||||||| | | || ||||||||||||||||||||||| |||| ||||| ||| Sbjct: 281 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 340 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | ||| | || ||||| |||||||| |||| ||||| || || || || || ||| Sbjct: 341 gttctgaaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatact 400 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatc 534 |||||||| || |||| ||||| || || || ||||||||| Sbjct: 401 gagaagccaagaatgagaggaccaaagagagcctccaagatc 442
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 784 Score = 107 bits (54), Expect = 4e-20 Identities = 225/282 (79%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 148 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 207 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 || || || ||||||||| |||||||| | || || ||||||| | |||||||| ||| Sbjct: 208 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 267 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | ||||||| | | || ||||||||||||||||||||||| |||| ||||| ||| Sbjct: 268 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 327 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | ||| | || ||||| |||||||| |||| ||||| || || || || || ||| Sbjct: 328 gttctgaaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatact 387 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatc 534 |||||||| || |||| ||||| || || || ||||||||| Sbjct: 388 gagaagccaagaatgagaggaccaaagagagcctccaagatc 429
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 989 Score = 107 bits (54), Expect = 4e-20 Identities = 225/282 (79%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 155 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 214 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 || || || ||||||||| |||||||| | || || ||||||| | |||||||| ||| Sbjct: 215 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 274 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | ||||||| | | || ||||||||||||||||||||||| |||| ||||| ||| Sbjct: 275 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 334 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | ||| | || ||||| |||||||| |||| ||||| || || || || || ||| Sbjct: 335 gttctgaaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatact 394 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatc 534 |||||||| || |||| ||||| || || || ||||||||| Sbjct: 395 gagaagccaagaatgagaggaccaaagagagcctccaagatc 436
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 107 bits (54), Expect = 4e-20 Identities = 225/282 (79%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 144 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 203 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 || || || ||||||||| |||||||| | || || ||||||| | |||||||| ||| Sbjct: 204 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 263 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | ||||||| | | || ||||||||||||||||||||||| |||| ||||| ||| Sbjct: 264 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 323 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | ||| | || ||||| |||||||| |||| ||||| || || || || || ||| Sbjct: 324 gttctgaaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatact 383 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatc 534 |||||||| || |||| ||||| || || || ||||||||| Sbjct: 384 gagaagccaagaatgagaggaccaaagagagcctccaagatc 425
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 107 bits (54), Expect = 4e-20 Identities = 147/178 (82%) Strand = Plus / Plus Query: 350 cttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggtt 409 ||||||| |||||| |||| |||||| ||| |||||| |||| |||||||| ||||| | Sbjct: 18675 cttgcttccgtggatatggaaggcgtaatggagagcgcaggagaaagtctgtacgtggat 18734 Query: 410 gcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaagaatg 469 |||||||||||| || || |||||| | |||||||||||||| |||||||| | |||| Sbjct: 18735 gcattgtcagccctgacctctctgttctgaacttggtgattgtgaagaagggtgacaatg 18794 Query: 470 atctgccaggcctgactgacactgagaagcccaggatgaagggacccaaaagggcttc 527 || | || ||| ||||||| ||||||||| ||||||| ||| ||||| |||||||| Sbjct: 18795 atttacctggcttgactgatgttgagaagccaaggatgaggggtcccaagagggcttc 18852 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 110 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 169 |||| ||||||||||| || ||||| ||||||||||||||| | || |||||||| |||| Sbjct: 17770 agttcaacatcgcgaatccaaccactgggtgccagaagaagctcgaaatcgatgatgacc 17829 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 |||| ||| |||||||| ||||||| |||| || || ||||| ||||| || || |||| Sbjct: 18063 aggagttcaagggctatgtcttcaaaatcactggagggtgcgacaagcaaggttttccaa 18122 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgcct 329 ||||||| || ||| | || ||||| || |||||||| Sbjct: 18123 tgaagcagggtgtgttgacccctggccgtgttcgcct 18159
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds Length = 980 Score = 99.6 bits (50), Expect = 9e-18 Identities = 120/141 (85%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 ||||||||||||||||||||||||||||||||||| |||||| | ||| | || |||||| Sbjct: 349 aagtctgttcgtggttgcattgtcagccaagatctctctgttcttaaccttgtcattgtc 408 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| |||| ||||| || || || || ||||| || ||||| |||||| |||| Sbjct: 409 aagaagggtgagaaggatcttcccgggcttaccgacaccga-aagcc--ggatgagggga 465 Query: 514 cccaaaagggcttccaagatc 534 ||||| || |||||||||||| Sbjct: 466 cccaagagagcttccaagatc 486 Score = 91.7 bits (46), Expect = 2e-15 Identities = 187/234 (79%) Strand = Plus / Plus Query: 106 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 165 |||||||| ||| |||| ||||| ||||| || |||||||||||| | |||||||| || Sbjct: 61 atgaagtttaacgtcgcaaacccaaccactggttgccagaagaagctcgagatcgacgat 120 Query: 166 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 225 |||||||| || || ||||||| |||||| |||| || || || ||| ||| | Sbjct: 121 gaccagaaactccgtgcgttttatgataagagactctctcaagaagtcagtggagatgct 180 Query: 226 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 285 |||| ||||| ||| |||| || || |||||||||||||| || || || ||||| ||| Sbjct: 181 ttgggcgaggagttcaagggatacattttcaagatcatgggagggtgtgacaagcaaggc 240 Query: 286 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 |||||||||||||| ||||| ||||||| || || ||||||||| |||||||| Sbjct: 241 ttcccaatgaagcagggagttttaactccaggccgtgttcgccttttgcttcac 294
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds Length = 945 Score = 97.6 bits (49), Expect = 4e-17 Identities = 169/209 (80%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 151 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 210 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 || || || ||||||||| |||||||| | || || ||||||| | |||||||| ||| Sbjct: 211 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 270 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | ||||||| | | || ||||||||||||||||||||||| |||| ||||| ||| Sbjct: 271 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 330 Query: 433 gttatcaacttggtgattgtcaagaaggg 461 ||| | ||| | || ||||| |||||||| Sbjct: 331 gttctgaaccttgtcattgtgaagaaggg 359
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Minus Query: 391 aggaagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgatt 450 ||||||||||||||||| ||||||||||||| ||| || |||||| | |||||||| ||| Sbjct: 135710 aggaagtctgttcgtgggtgcattgtcagcccagacctctctgttctgaacttggttatt 135651 Query: 451 gtcaagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaag 510 || |||||||| | |||||| ||||||| ||||||| ||| |||||||| |||| | Sbjct: 135650 gtgaagaagggtgaaaatgatttgccaggtttgactgatgttgaaaagcccagaatgagg 135591 Query: 511 ggacccaaaagggcttccaa 530 || || || ||||||||||| Sbjct: 135590 ggtcctaagagggcttccaa 135571 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Minus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 ||||||| |||| ||| ||||||| |||| ||||| || || || || ||||| |||| Sbjct: 136820 aggaatttaagggatatgtcttcaaaatcactggtggatgtgacaaacaaggctttccaa 136761 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgcct 329 ||||||| || ||| |||| ||||| || |||||||| Sbjct: 136760 tgaagcagggtgtgttaacccctggtcgtgttcgcct 136724
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete sequence Length = 96221 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 391 aggaagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgatt 450 ||||||||||||||||| ||||||||||||| ||| || |||||| | |||||||| ||| Sbjct: 93843 aggaagtctgttcgtgggtgcattgtcagcccagacctctctgttctgaacttggttatt 93902 Query: 451 gtcaagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaag 510 || |||||||| | |||||| ||||||| ||||||| ||| |||||||| |||| | Sbjct: 93903 gtgaagaagggtgaaaatgatttgccaggtttgactgatgttgaaaagcccagaatgagg 93962 Query: 511 ggacccaaaagggcttccaa 530 || || || ||||||||||| Sbjct: 93963 ggtcctaagagggcttccaa 93982 Score = 42.1 bits (21), Expect = 1.9 Identities = 78/97 (80%) Strand = Plus / Plus Query: 233 aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 292 ||||||| |||| ||| ||||||| |||| ||||| || || || || ||||| |||| Sbjct: 92733 aggaatttaagggatatgtcttcaaaatcactggtggatgtgacaaacaaggctttccaa 92792 Query: 293 tgaagcaaggagtgctaactcctgggcgcgttcgcct 329 ||||||| || ||| |||| ||||| || |||||||| Sbjct: 92793 tgaagcagggtgtgttaacccctggtcgtgttcgcct 92829
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 91.7 bits (46), Expect = 2e-15 Identities = 224/282 (79%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||||||| || ||||| ||||| |||||||| ||||| || ||||| || || Sbjct: 89824 ttcaagatcatgggaggatgcgacaagcaaggcttcccgatgaaacagggagttctcacc 89765 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 ||||| || || || || |||||||| | ||||| ||||||| | ||||| || ||| Sbjct: 89764 cctggtcgtgtccgtctcttgcttcaccgaggcactccttgcttcagaggacacggaagg 89705 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | || ||| | |||| |||||||| || |||||||||||||||||||| || ||| Sbjct: 89704 aggaccggagagaggaggagaaagtctgtccgcggttgcattgtcagccaagacctctct 89645 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | |||||||| |||||||||||||| |||| ||||| || || || || || || Sbjct: 89644 gttcttaacttggttattgtcaagaaggg-tagaaggatcttcccgggcttaccgatacc 89586 Query: 493 gagaagcccaggatgaagggacccaaaagggcttccaagatc 534 |||||||| ||||||| |||||| || || ||||| |||||| Sbjct: 89585 gagaagccgaggatgaggggacctaagagagcttctaagatc 89544 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 110 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 169 |||| ||| ||||||| || ||||| || |||||||||||| | |||||||||||||||| Sbjct: 90228 agttcaacgtcgcgaatccgaccactggatgccagaagaagctcgagatcgatgacgacc 90169 Query: 170 agaagctg 177 | |||||| Sbjct: 90168 aaaagctg 90161
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene) Length = 959 Score = 89.7 bits (45), Expect = 9e-15 Identities = 258/329 (78%) Strand = Plus / Plus Query: 106 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 165 |||||||| || ||||| || |||||||| ||||||||||| ||| | ||||| || ||| Sbjct: 26 atgaagttcaatatcgccaatcccaccactgggtgccagaaaaagctcgagattgacgac 85 Query: 166 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 225 ||||||||||| || ||||||| ||| | || || || || || ||||||| | Sbjct: 86 gaccagaagctccgtgcattttatgataagcgtatttcacaagaagtcagtggtgatgct 145 Query: 226 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 285 || || ||||| ||| |||| ||| | ||||| |||||||| || || || |||||||| Sbjct: 146 cttggcgaggagttcaagggatatgttttcaaaatcatgggaggttgtgacaagcagggt 205 Query: 286 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 345 || || |||||||| |||||||| |||||||| ||||| ||||| |||| ||||| || Sbjct: 206 tttcccatgaagcagggagtgctgactcctggtcgcgtccgcctattgctgcacagagga 265 Query: 346 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 405 ||| ||||||| ||||| |||| ||||| || ||||| | ||||||||||| ||| Sbjct: 266 acaccttgcttccgtggttatggaaggcgcaacggagagcgaagaaggaagtctgtgcgt 325 Query: 406 ggttgcattgtcagccaagatctatctgt 434 || |||||||| |||| ||||| ||||| Sbjct: 326 gggtgcattgttagccctgatctctctgt 354
>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6 Length = 804 Score = 79.8 bits (40), Expect = 9e-12 Identities = 202/256 (78%) Strand = Plus / Minus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||| ||||| || || || |||||||| || ||||||||||| ||||| ||||| Sbjct: 790 ttcaagattatgggaggatgtgacaagcaggggtttccaatgaagcagggagttttaact 731 Query: 313 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 372 || || || ||||||||| |||| || | ||||| |||| || || || |||| ||| Sbjct: 730 ccaggccgtgttcgccttttgctgtaccgcggcactccttgtttccgggggtatggtagg 671 Query: 373 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 432 | |||||||||| | || |||||||| ||||| ||||||||||||| ||||| ||| Sbjct: 670 agaaatggtgagcgcagaagaaagtctgtccgtggatgcattgtcagccctgatctttct 611 Query: 433 gttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacact 492 ||| | || |||| || || || ||||| ||||||||||||| || ||||| |||||| Sbjct: 610 gttctgaatctggttatcgtgaaaaagggtgagaatgatctgcctggactgacagacact 551 Query: 493 gagaagcccaggatga 508 || || || ||||||| Sbjct: 550 gaaaaaccaaggatga 535
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial Length = 920 Score = 79.8 bits (40), Expect = 9e-12 Identities = 184/232 (79%) Strand = Plus / Plus Query: 227 tgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggct 286 |||| |||||||| | |||||| | |||||||||| ||||| || || || || || | Sbjct: 12 tgggcgaggaatttaaaggctatgttttcaagatcactggtgggtgtgacaaacaaggat 71 Query: 287 tcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggca 346 ||||||||||||| |||||||| || ||||| || ||||| || ||||||| || || | Sbjct: 72 tcccaatgaagcagggagtgctgacacctggtcgtgttcgactcttgcttcatagaggaa 131 Query: 347 catcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtg 406 | |||| || |||||| |||| ||||| ||| ||||| | || ||||||||||||| Sbjct: 132 ctccttgtttccgtggatatggaaggcgcaatggagagcgtagaagaaagtctgttcgtg 191 Query: 407 gttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaa 458 | ||||||||||||| || || |||||| | |||||||| ||||| ||||| Sbjct: 192 gatgcattgtcagccctgacctctctgttttgaacttggtaattgtgaagaa 243
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 104 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 163 |||||||| | ||||| || |||||||||||||| ||||||||||| | ||||| |||| Sbjct: 61 ccatgaagctcaacattgcctaccccaccacggggcgccagaagaagctcgagattgatg 120 Query: 164 acgaccagaagctgcg 179 |||||||||||||||| Sbjct: 121 acgaccagaagctgcg 136 Score = 40.1 bits (20), Expect = 7.3 Identities = 65/80 (81%) Strand = Plus / Plus Query: 229 ggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttc 288 ||||| || ||| ||||||| |||||||||||||||| || || |||||||| ||| Sbjct: 186 ggtgacgagttcaagggctacgtcttcaagatcatgggaggacaggacaagcagggtttc 245 Query: 289 ccaatgaagcaaggagtgct 308 || |||||||| || ||||| Sbjct: 246 cccatgaagcagggtgtgct 265
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 113058 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 112999 Query: 313 cctgggcgcgttcgccttctgcttcac 339 || || || ||||||||| |||||||| Sbjct: 112998 ccaggccgtgttcgccttttgcttcac 112972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 ||||||||||||||||||||||| |||| ||||| |||||| | ||| | || ||||| Sbjct: 112808 aagtctgttcgtggttgcattgtgagccctgatctctctgttctgaaccttgtcattgtg 112749 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| |||| ||||| || || || || || ||||||||||| || |||| ||| Sbjct: 112748 aagaagggtgagaacgatcttcctgggcttaccgatactgagaagccaagaatgagagga 112689 Query: 514 cccaaaagggcttccaagatc 534 || || || || ||||||||| Sbjct: 112688 ccaaagagagcctccaagatc 112668
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||| |||||| ||||||||||| || |||||||||||||| ||||| | ||| Sbjct: 40213 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 40272 Query: 313 cctgggcgcgttcgccttctgcttcac 339 || || || ||||||||| |||||||| Sbjct: 40273 ccaggccgtgttcgccttttgcttcac 40299 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 ||||||||||||||||||||||| |||| ||||| |||||| | ||| | || ||||| Sbjct: 40463 aagtctgttcgtggttgcattgtgagccctgatctctctgttctgaaccttgtcattgtg 40522 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| |||| ||||| || || || || || ||||||||||| || |||| ||| Sbjct: 40523 aagaagggtgagaacgatcttcctgggcttaccgatactgagaagccaagaatgagagga 40582 Query: 514 cccaaaagggcttccaagatc 534 || || || || ||||||||| Sbjct: 40583 ccaaagagagcctccaagatc 40603
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome AT5G10360 (EMB3010) mRNA, complete cds Length = 1095 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || || ||||| || |||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 374 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 433 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 434 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 493 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 494 cccaagagggcatcaaagatc 514
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 750 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || || ||||| || |||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 289 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 348 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 349 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 408 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 409 cccaagagggcatcaaagatc 429
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || || ||||| || |||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 374 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 433 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 434 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 493 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 494 cccaagagggcatcaaagatc 514
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || || ||||| || |||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 374 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 433 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 434 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 493 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 494 cccaagagggcatcaaagatc 514
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || || ||||| || |||||| Sbjct: 195 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 254 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 255 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 302 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 357 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 416 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 417 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 476 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 477 cccaagagggcatcaaagatc 497
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || || ||||| || |||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 252 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 355 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 414 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 415 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 474 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 475 cccaagagggcatcaaagatc 495
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6 Length = 957 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || || ||||| || |||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 289 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 348 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 349 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 408 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 409 cccaagagggcatcaaagatc 429
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 253 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 312 |||||||||||||| || || || ||||| || ||||||||||| |||||||| || ||| Sbjct: 105341 ttcaagatcatgggaggatgtgacaagcaaggtttcccaatgaaacaaggagttctcact 105400 Query: 313 cctgggcgcgttcgccttctgcttcac 339 || ||||| || || ||| |||||||| Sbjct: 105401 ccagggcgtgtccgtcttttgcttcac 105427 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 105579 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 105638 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 105639 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 105698 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 105699 cccaagagggcatcaaagatc 105719
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 58.0 bits (29), Expect = 3e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 355 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 414 Query: 454 aagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaaggga 513 |||||||| | |||||| || || || || |||||||||||||| || |||| || Sbjct: 415 aagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagaggt 474 Query: 514 cccaaaagggcttccaagatc 534 ||||| ||||| || |||||| Sbjct: 475 cccaagagggcatcaaagatc 495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 232 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 291 ||||||||| |||| || | |||||||||||||| || || | ||||| || |||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgttacaagcaaggtttccca 252 Query: 292 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 339 ||||| |||||||| || ||||| ||||| || || ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 689 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtc 453 |||||||| |||||||||||||| |||| || || |||||| | |||||||| ||||| Sbjct: 35 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattgtg 94 Query: 454 aagaaggg 461 |||||||| Sbjct: 95 aagaaggg 102
>gb|BC061628.1| Xenopus tropicalis 40S ribosomal protein S6, mRNA (cDNA clone MGC:76307 IMAGE:5379757), complete cds Length = 846 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 274 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 333 |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| |||||| Sbjct: 199 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 258
>gb|BC082345.1| Xenopus tropicalis 40S ribosomal protein S6, mRNA (cDNA clone MGC:79740 IMAGE:6983051), complete cds Length = 835 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 274 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 333 |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| |||||| Sbjct: 192 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 251
>ref|NM_203821.1| Xenopus tropicalis 40S ribosomal protein S6 (MGC76307), mRNA Length = 846 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 274 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 333 |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| |||||| Sbjct: 199 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 258
>emb|CR760876.2| Xenopus tropicalis finished cDNA, clone TTpA006h06 Length = 824 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 274 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 333 |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| |||||| Sbjct: 186 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 245
>gb|AY521658.1| Pseudopleuronectes americanus 40S ribosomal protein S6 (RPS6) mRNA, partial cds Length = 550 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgct 335 |||||||||||||| |||||||| || ||||| || | ||| ||||| ||||| ||||| Sbjct: 97 aagcagggcttccccatgaagcagggtgtgctgacccatggtcgcgtgcgcctgctgct 155
>ref|NM_061034.3| Caenorhabditis elegans Ribosomal Protein, Small subunit family member (rps-6) (rps-6) mRNA, complete cds Length = 806 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaagga 303 |||||||| |||||||||||||||||| Sbjct: 191 aagcagggattcccaatgaagcaagga 217
>gb|AY130373.1| Petromyzon marinus ribosomal protein S6-like mRNA, partial sequence Length = 691 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 437 tcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgactgacac 491 |||| |||||||| |||||||||||| |||| || | ||||||||||| ||||| Sbjct: 300 tcaatttggtgatcgtcaagaagggcgagaaggacatcccaggcctgaccgacac 354 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaaggagtgct 308 |||||||||||||| |||||||| || ||||| Sbjct: 146 aagcagggcttccccatgaagcagggcgtgct 177
>gb|AF429980.1| Spodoptera frugiperda ribosomal protein S6 mRNA, complete cds Length = 842 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgt 416 ||||||||||||||||||||||| Sbjct: 301 aagtctgttcgtggttgcattgt 323 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaaggagt 305 |||||||||||||| |||||||| ||||| Sbjct: 190 aagcagggcttccccatgaagcagggagt 218
>emb|AL132902.4|CEY71A12B Caenorhabditis elegans YAC Y71A12B, complete sequence Length = 137184 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaagga 303 |||||||| |||||||||||||||||| Sbjct: 83964 aagcagggattcccaatgaagcaagga 83990
>ref|XM_447041.1| Candida glabrata CBS138, CAGL0H05643g partial mRNA Length = 711 Score = 44.1 bits (22), Expect = 0.47 Identities = 61/74 (82%) Strand = Plus / Plus Query: 229 ggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttc 288 ||||| |||||| |||| || | ||||||||||| ||||| ||| ||||| || ||| Sbjct: 124 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 183 Query: 289 ccaatgaagcaagg 302 |||||||||||||| Sbjct: 184 ccaatgaagcaagg 197
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 44.1 bits (22), Expect = 0.47 Identities = 61/74 (82%) Strand = Plus / Plus Query: 229 ggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttc 288 ||||| |||||| |||| || | ||||||||||| ||||| ||| ||||| || ||| Sbjct: 560268 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 560327 Query: 289 ccaatgaagcaagg 302 |||||||||||||| Sbjct: 560328 ccaatgaagcaagg 560341
>gb|AF402814.1| Ictalurus punctatus 40S ribosomal protein S6 mRNA, complete cds Length = 819 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 gataagcagggcttcccaatgaagca 299 ||||||||||||||||| |||||||| Sbjct: 193 gataagcagggcttccccatgaagca 218
>dbj|AK108193.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C04, full insert sequence Length = 993 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 242 agggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaatgaagca 299 ||||||| |||||||||||| || ||| ||| |||||||||||||| |||||||| Sbjct: 187 agggctacgtcttcaagatcaccggcggcaacgacaagcagggcttccccatgaagca 244
>gb|AC146455.3| Pan troglodytes BAC clone CH251-460B7 from Y, complete sequence Length = 211439 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 481 ctgactgacactgagaagcccaggatgaaggga 513 ||||| ||| |||||| |||||||||||||||| Sbjct: 151197 ctgacagaccctgagaggcccaggatgaaggga 151165 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 ctgagaagcccaggatgaagg 511 ||||||||||||||||||||| Sbjct: 15983 ctgagaagcccaggatgaagg 15963
>gb|BC041281.1| Xenopus laevis ribosomal protein S6, mRNA (cDNA clone MGC:53553 IMAGE:4681484), complete cds Length = 840 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 333 ||||| ||||| || ||||| || ||||||||||||| ||| || ||||| |||||| Sbjct: 202 aagcaaggctttcccatgaaacagggagtgctaactcatggtcgtgttcgtcttctg 258
>gb|AC142350.1| Pan troglodytes BAC clone RP43-12B4 from Y, complete sequence Length = 168803 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 481 ctgactgacactgagaagcccaggatgaaggga 513 ||||| ||| |||||| |||||||||||||||| Sbjct: 161576 ctgacagaccctgagaggcccaggatgaaggga 161608
>emb|AL445208.11| Human DNA sequence from clone RP11-104N3 on chromosome 6, complete sequence Length = 60742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 aggaggtagttggtgatcttc 226 ||||||||||||||||||||| Sbjct: 14137 aggaggtagttggtgatcttc 14157
>emb|AL353193.7| Human DNA sequence from clone RP11-137F15 on chromosome 20 Contains a pseudogene similar to a TCEAL1 (transcription elongation factor A (SII)-like 1, the 5' part of the ATRN gene for attractin with dipeptidylpeptidase IV activity and a CpG island, complete sequence Length = 51371 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaag 297 ||||||||||||||||||||| Sbjct: 27357 aagcagggcttcccaatgaag 27377
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 481 ctgactgacactgagaagcccaggatgaaggga 513 ||||| ||| |||||| |||||||||||||||| Sbjct: 7643369 ctgacagaccctgagaggcccaggatgaaggga 7643337 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 ctgagaagcccaggatgaagg 511 ||||||||||||||||||||| Sbjct: 7508155 ctgagaagcccaggatgaagg 7508135
>gb|AC147659.5| Pan troglodytes BAC clone CH251-425E12 from chromosome y, complete sequence Length = 168988 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 ctgagaagcccaggatgaagg 511 ||||||||||||||||||||| Sbjct: 87302 ctgagaagcccaggatgaagg 87282
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 ctcgccccaaaccctagcgct 24 ||||||||||||||||||||| Sbjct: 41486372 ctcgccccaaaccctagcgct 41486352
>gb|AC155886.2| Medicago truncatula chromosome 7 BAC clone mth2-173o24, complete sequence Length = 119696 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 caacttcaccatgaagttgaa 116 ||||||||||||||||||||| Sbjct: 77325 caacttcaccatgaagttgaa 77305
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 ctcgccccaaaccctagcgct 24 ||||||||||||||||||||| Sbjct: 42665 ctcgccccaaaccctagcgct 42645
>gb|AF525803.1| Chlamys farreri ribosomal protein S6-like mRNA, partial sequence Length = 554 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 510 gggacccaaaagggcttccaagatcaagaagct 542 |||||||||||||||| |||||||| |||||| Sbjct: 151 gggacccaaaagggctagcaagatcaggaagct 183
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 ctcgccccaaaccctagcgct 24 ||||||||||||||||||||| Sbjct: 54571 ctcgccccaaaccctagcgct 54551
>dbj|AK120633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I18, full insert sequence Length = 5246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ctcgccccaaaccctagcgct 24 ||||||||||||||||||||| Sbjct: 433 ctcgccccaaaccctagcgct 453
>dbj|AK105567.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-C09, full insert sequence Length = 2145 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ctcgccccaaaccctagcgct 24 ||||||||||||||||||||| Sbjct: 438 ctcgccccaaaccctagcgct 458
>gb|AY308769.1| Bothus lunatus recombinase activating gene-1 (RAG1) gene, partial cds Length = 1455 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggaggtagttggtgatcttc 226 |||||||||||||||||||| Sbjct: 1315 ggaggtagttggtgatcttc 1296
>ref|NM_113329.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G24240 mRNA, complete cds Length = 3426 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gcttccaagatcaagaagct 542 |||||||||||||||||||| Sbjct: 1785 gcttccaagatcaagaagct 1766
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gaagaaggtggagatcgatg 163 |||||||||||||||||||| Sbjct: 1201647 gaagaaggtggagatcgatg 1201628
>gb|AC009259.8| Trypanosoma brucei chromosome 6 clone RPCI93-4F7, complete sequence Length = 153262 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gaagaaggtggagatcgatg 163 |||||||||||||||||||| Sbjct: 11907 gaagaaggtggagatcgatg 11926
>gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G9, complete sequence Length = 140056 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gaagaaggtggagatcgatg 163 |||||||||||||||||||| Sbjct: 139271 gaagaaggtggagatcgatg 139290
>gb|AY190727.1| Pagrus major S6 ribosomal protein mRNA, partial cds Length = 564 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaaggagtgct 308 |||||||||||||| |||||||| || ||||| Sbjct: 146 aagcagggcttccccatgaagcagggtgtgct 177
>gb|AY430215.1| Spirinchus thaleichthys recombination activating protein 1 (RAG1) gene, partial cds Length = 1472 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggaggtagttggtgatcttc 226 |||||||||||||||||||| Sbjct: 1335 ggaggtagttggtgatcttc 1316
>gb|AY380539.1| Salangichthys microdon recombination-activating protein 1 (RAG1) gene, partial cds Length = 1506 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggaggtagttggtgatcttc 226 |||||||||||||||||||| Sbjct: 1342 ggaggtagttggtgatcttc 1323
>gb|AY380538.1| Hypomesus olidus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1555 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggaggtagttggtgatcttc 226 |||||||||||||||||||| Sbjct: 1364 ggaggtagttggtgatcttc 1345
>gb|AY380537.1| Thaleichthys pacificus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggaggtagttggtgatcttc 226 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|AY380536.1| Plecoglossus altivelis recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggaggtagttggtgatcttc 226 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ctcgccccaaaccctagcgc 23 |||||||||||||||||||| Sbjct: 34784 ctcgccccaaaccctagcgc 34803
>ref|NM_012652.1| Rattus norvegicus solute carrier family 9, member 1 (Slc9a1), mRNA Length = 4581 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2824 aggtagttggtgatcttctg 2805
>ref|XM_821548.1| Trypanosoma brucei TREU927 clone RPCI93-4F7 hypothetical protein (Tb927.6.4180) partial mRNA Length = 450 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gaagaaggtggagatcgatg 163 |||||||||||||||||||| Sbjct: 276 gaagaaggtggagatcgatg 295
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tcctgggcgcgttcgccttc 331 |||||||||||||||||||| Sbjct: 136286 tcctgggcgcgttcgccttc 136267
>ref|NM_016981.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1 (Slc9a1), mRNA Length = 4126 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2378 aggtagttggtgatcttctg 2359
>gb|BC052708.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone MGC:64648 IMAGE:5702902), complete cds Length = 3907 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2717 aggtagttggtgatcttctg 2698
>gb|BC051431.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone MGC:58902 IMAGE:6529306), complete cds Length = 3989 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2182 aggtagttggtgatcttctg 2163
>emb|AJ550163.1|ATH550163 Arabidopsis thaliana mRNA for LRR receptor-like kinase 2 (rch2 gene) Length = 3770 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gcttccaagatcaagaagct 542 |||||||||||||||||||| Sbjct: 1912 gcttccaagatcaagaagct 1893
>dbj|AB224070.1| Aspergillus oryzae cDNA, contig sequence: AoEST0912 Length = 888 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 gatctgccaggcctgactga 488 |||||||||||||||||||| Sbjct: 81 gatctgccaggcctgactga 62
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 gatctgccaggcctgactga 488 |||||||||||||||||||| Sbjct: 1360805 gatctgccaggcctgactga 1360824
>gb|AF472590.1| Sinorhizobium meliloti JJ1c10 hypothetical transmembrane protein, hypothetical protein, hypothetical transmembrane protein, hypothetical protein, aspartate aminotransferase A (aatA), hypothetical protein, putative oxidoreductase protein, and putative oxidoreductase protein genes, complete cds; and putative transcription regulator protein gene, partial cds Length = 7402 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 tcctgggcgcgttcgccttc 331 |||||||||||||||||||| Sbjct: 1998 tcctgggcgcgttcgccttc 2017
>dbj|AK154857.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630109M11 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 4191 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2872 aggtagttggtgatcttctg 2853
>dbj|AK150135.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530135M05 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 4609 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2838 aggtagttggtgatcttctg 2819
>dbj|AK162209.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420457F09 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 1624 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 166 aggtagttggtgatcttctg 147
>gb|BC004687.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone IMAGE:3500839), partial cds Length = 1833 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 42 aggtagttggtgatcttctg 23
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ctcgccccaaaccctagcgc 23 |||||||||||||||||||| Sbjct: 1941907 ctcgccccaaaccctagcgc 1941926
>gb|AC008766.4|AC008766 Homo sapiens chromosome 5 clone CTD-2004A9, complete sequence Length = 147530 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 cctgactgacactgagaagc 499 |||||||||||||||||||| Sbjct: 65197 cctgactgacactgagaagc 65178
>gb|AC018742.5| Homo sapiens BAC clone RP11-644J14 from 2, complete sequence Length = 174225 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 ggctatatcttcaagatcatgggt 267 |||||||||||||||| ||||||| Sbjct: 10801 ggctatatcttcaagagcatgggt 10778
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gaatctcccaggaggtagtt 216 |||||||||||||||||||| Sbjct: 94900 gaatctcccaggaggtagtt 94881
>gb|AY130372.1| Myxine glutinosa ribosomal protein S6-like mRNA, partial sequence Length = 691 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 aagtctgttcgtggttgcattgtc 417 |||||||||||||| ||||||||| Sbjct: 257 aagtctgttcgtgggtgcattgtc 280
>dbj|AP002037.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K13K6 Length = 10480 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gcttccaagatcaagaagct 542 |||||||||||||||||||| Sbjct: 55 gcttccaagatcaagaagct 36
>gb|AF009665.1|AF009665 Oncorhynchus mykiss S6 ribosomal protein mRNA, complete cds Length = 805 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 277 aagcagggcttcccaatgaagcaaggagtgct 308 |||||||||||||| |||||||| || ||||| Sbjct: 175 aagcagggcttccccatgaagcagggtgtgct 206
>emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chromosome 4, complete sequence Length = 163961 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 tgggtggctgcgataagcagggct 286 |||||||||| ||||||||||||| Sbjct: 150128 tgggtggctgtgataagcagggct 150151
>gb|M85299.1|RATNHEXI Rat sodium/hydrogen exchange protein-isoform 1 (NHE-1) mRNA, complete cds Length = 4581 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2824 aggtagttggtgatcttctg 2805
>gb|U51112.1|MMU51112 Mus musculus Na+/H+ exchanger (NHE-1) mRNA, complete cds Length = 4126 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtagttggtgatcttctg 228 |||||||||||||||||||| Sbjct: 2378 aggtagttggtgatcttctg 2359 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,022,067 Number of Sequences: 3902068 Number of extensions: 4022067 Number of successful extensions: 80179 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79716 Number of HSP's gapped (non-prelim): 443 length of query: 542 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 519 effective length of database: 17,143,297,704 effective search space: 8897371508376 effective search space used: 8897371508376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)