Clone Name | bart36d06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK104639.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E05, full insert sequence Length = 1254 Score = 494 bits (249), Expect = e-136 Identities = 457/525 (87%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 20 gcagccggagaagcggtcggggttccggaagagcttcccggggctgttcaaggagcacgg 79 |||||||||||||| ||| |||||| ||||||||||| || | |||||||| || || Sbjct: 209 gcagccggagaagctgtccgggttcaggaagagcttcaatggcttcttcaaggatcatgg 268 Query: 80 cggcgtgatggagcggtgcgaggacgagtacatgctgcacctggccgccgagttctcccg 139 |||||| || ||| ||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 269 cggcgtcatcgagaagtgcgaggaggagtacatgctccacctcgccgccgagttctcgcg 328 Query: 140 gttcaagaacctgatggtgctgtgggcgatgcacccgtgggagcgcgacgcccgcctcgc 199 ||||||||||||||||||| ||||||||||||||||||||||||||||||| || || || Sbjct: 329 gttcaagaacctgatggtgatgtgggcgatgcacccgtgggagcgcgacgcgcggctggc 388 Query: 200 gcaccacgtcctccaccaggcccacccctccgccatcgtcgtggagatcgcctgcacccg 259 ||||||||| ||||||||||| ||||| | |||||||||||||||||||| |||||||| Sbjct: 389 gcaccacgtgctccaccaggcgcacccggcggccatcgtcgtggagatcgcttgcacccg 448 Query: 260 ctccgccgaggagctcctcggcgcgcgcaaggcctacatggcgctcttccaccactccct 319 | || ||||||||||||||||| |||||||| ||| |||||| |||||||||||||| Sbjct: 449 gacggcggaggagctcctcggcgctcgcaaggcgtaccaggcgctgttccaccactccct 508 Query: 320 cgaggaggacgtcgcctaccgcgccaaggacaagccctactgcagcctgctggtggggct 379 |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 509 cgaggaggacgtcgcctaccgcgccagggacaagccctactgcggcctgctggtcgggct 568 Query: 380 ggtgagcgcgtaccggtacgaagggcccaaggtgagcgacgacacggccaaggcggaggc 439 ||||||||||||||||||||| || || | ||||||||| || ||||| |||||||| Sbjct: 569 ggtgagcgcgtaccggtacgagggcccgagggtgagcgaggagacggcgcgcgcggaggc 628 Query: 440 caaggcgctgggagcggcggtgaagagcgccg-----acggcggc-aagctggtggagaa 493 |||||||| | || |||||||||||||||| ||||||| |||||||||||||| Sbjct: 629 gaaggcgctcgtcgccgcggtgaagagcgccggccacgcggcggcgaagctggtggagaa 688 Query: 494 cgacgaggtggtaaggatcctcaccaccaggagcaagcctcacct 538 |||||| || || ||||||||||||||| |||||||||| ||||| Sbjct: 689 cgacgacgtcgtcaggatcctcaccacccggagcaagccgcacct 733
>dbj|AK098879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F11, full insert sequence Length = 1254 Score = 494 bits (249), Expect = e-136 Identities = 457/525 (87%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 20 gcagccggagaagcggtcggggttccggaagagcttcccggggctgttcaaggagcacgg 79 |||||||||||||| ||| |||||| ||||||||||| || | |||||||| || || Sbjct: 210 gcagccggagaagctgtccgggttcaggaagagcttcaatggcttcttcaaggatcatgg 269 Query: 80 cggcgtgatggagcggtgcgaggacgagtacatgctgcacctggccgccgagttctcccg 139 |||||| || ||| ||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 270 cggcgtcatcgagaagtgcgaggaggagtacatgctccacctcgccgccgagttctcgcg 329 Query: 140 gttcaagaacctgatggtgctgtgggcgatgcacccgtgggagcgcgacgcccgcctcgc 199 ||||||||||||||||||| ||||||||||||||||||||||||||||||| || || || Sbjct: 330 gttcaagaacctgatggtgatgtgggcgatgcacccgtgggagcgcgacgcgcggctggc 389 Query: 200 gcaccacgtcctccaccaggcccacccctccgccatcgtcgtggagatcgcctgcacccg 259 ||||||||| ||||||||||| ||||| | |||||||||||||||||||| |||||||| Sbjct: 390 gcaccacgtgctccaccaggcgcacccggcggccatcgtcgtggagatcgcttgcacccg 449 Query: 260 ctccgccgaggagctcctcggcgcgcgcaaggcctacatggcgctcttccaccactccct 319 | || ||||||||||||||||| |||||||| ||| |||||| |||||||||||||| Sbjct: 450 gacggcggaggagctcctcggcgctcgcaaggcgtaccaggcgctgttccaccactccct 509 Query: 320 cgaggaggacgtcgcctaccgcgccaaggacaagccctactgcagcctgctggtggggct 379 |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 510 cgaggaggacgtcgcctaccgcgccagggacaagccctactgcggcctgctggtcgggct 569 Query: 380 ggtgagcgcgtaccggtacgaagggcccaaggtgagcgacgacacggccaaggcggaggc 439 ||||||||||||||||||||| || || | ||||||||| || ||||| |||||||| Sbjct: 570 ggtgagcgcgtaccggtacgagggcccgagggtgagcgaggagacggcgcgcgcggaggc 629 Query: 440 caaggcgctgggagcggcggtgaagagcgccg-----acggcggc-aagctggtggagaa 493 |||||||| | || |||||||||||||||| ||||||| |||||||||||||| Sbjct: 630 gaaggcgctcgtcgccgcggtgaagagcgccggccacgcggcggcgaagctggtggagaa 689 Query: 494 cgacgaggtggtaaggatcctcaccaccaggagcaagcctcacct 538 |||||| || || ||||||||||||||| |||||||||| ||||| Sbjct: 690 cgacgacgtcgtcaggatcctcaccacccggagcaagccgcacct 734
>dbj|AK060054.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B07, full insert sequence Length = 1284 Score = 494 bits (249), Expect = e-136 Identities = 457/525 (87%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 20 gcagccggagaagcggtcggggttccggaagagcttcccggggctgttcaaggagcacgg 79 |||||||||||||| ||| |||||| ||||||||||| || | |||||||| || || Sbjct: 209 gcagccggagaagctgtccgggttcaggaagagcttcaatggcttcttcaaggatcatgg 268 Query: 80 cggcgtgatggagcggtgcgaggacgagtacatgctgcacctggccgccgagttctcccg 139 |||||| || ||| ||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 269 cggcgtcatcgagaagtgcgaggaggagtacatgctccacctcgccgccgagttctcgcg 328 Query: 140 gttcaagaacctgatggtgctgtgggcgatgcacccgtgggagcgcgacgcccgcctcgc 199 ||||||||||||||||||| ||||||||||||||||||||||||||||||| || || || Sbjct: 329 gttcaagaacctgatggtgatgtgggcgatgcacccgtgggagcgcgacgcgcggctggc 388 Query: 200 gcaccacgtcctccaccaggcccacccctccgccatcgtcgtggagatcgcctgcacccg 259 ||||||||| ||||||||||| ||||| | |||||||||||||||||||| |||||||| Sbjct: 389 gcaccacgtgctccaccaggcgcacccggcggccatcgtcgtggagatcgcttgcacccg 448 Query: 260 ctccgccgaggagctcctcggcgcgcgcaaggcctacatggcgctcttccaccactccct 319 | || ||||||||||||||||| |||||||| ||| |||||| |||||||||||||| Sbjct: 449 gacggcggaggagctcctcggcgctcgcaaggcgtaccaggcgctgttccaccactccct 508 Query: 320 cgaggaggacgtcgcctaccgcgccaaggacaagccctactgcagcctgctggtggggct 379 |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 509 cgaggaggacgtcgcctaccgcgccagggacaagccctactgcggcctgctggtcgggct 568 Query: 380 ggtgagcgcgtaccggtacgaagggcccaaggtgagcgacgacacggccaaggcggaggc 439 ||||||||||||||||||||| || || | ||||||||| || ||||| |||||||| Sbjct: 569 ggtgagcgcgtaccggtacgagggcccgagggtgagcgaggagacggcgcgcgcggaggc 628 Query: 440 caaggcgctgggagcggcggtgaagagcgccg-----acggcggc-aagctggtggagaa 493 |||||||| | || |||||||||||||||| ||||||| |||||||||||||| Sbjct: 629 gaaggcgctcgtcgccgcggtgaagagcgccggccacgcggcggcgaagctggtggagaa 688 Query: 494 cgacgaggtggtaaggatcctcaccaccaggagcaagcctcacct 538 |||||| || || ||||||||||||||| |||||||||| ||||| Sbjct: 689 cgacgacgtcgtcaggatcctcaccacccggagcaagccgcacct 733
>ref|XM_475176.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 396 bits (200), Expect = e-107 Identities = 351/400 (87%), Gaps = 6/400 (1%) Strand = Plus / Plus Query: 145 agaacctgatggtgctgtgggcgatgcacccgtgggagcgcgacgcccgcctcgcgcacc 204 |||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 278 agaacctgatggtgatgtgggcgatgcacccgtgggagcgcgacgcgcggctggcgcacc 337 Query: 205 acgtcctccaccaggcccacccctccgccatcgtcgtggagatcgcctgcacccgctccg 264 |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||| | | Sbjct: 338 acgtgctccaccaggcgcacccggcggccatcgtcgtggagatcgcttgcacccggacgg 397 Query: 265 ccgaggagctcctcggcgcgcgcaaggcctacatggcgctcttccaccactccctcgagg 324 | ||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||| Sbjct: 398 cggaggagctcctcggcgctcgcaaggcgtaccaggcgctgttccaccactccctcgagg 457 Query: 325 aggacgtcgcctaccgcgccaaggacaagccctactgcagcctgctggtggggctggtga 384 ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| Sbjct: 458 aggacgtcgcctaccgcgccagggacaagccctactgcggcctgctggtcgggctggtga 517 Query: 385 gcgcgtaccggtacgaagggcccaaggtgagcgacgacacggccaaggcggaggccaagg 444 |||||||||||||||| || || | ||||||||| || ||||| |||||||| |||| Sbjct: 518 gcgcgtaccggtacgagggcccgagggtgagcgaggagacggcgcgcgcggaggcgaagg 577 Query: 445 cgctgggagcggcggtgaagagcgccg-----acggcggc-aagctggtggagaacgacg 498 |||| | || |||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 578 cgctcgtcgccgcggtgaagagcgccggccacgcggcggcgaagctggtggagaacgacg 637 Query: 499 aggtggtaaggatcctcaccaccaggagcaagcctcacct 538 | || || ||||||||||||||| |||||||||| ||||| Sbjct: 638 acgtcgtcaggatcctcaccacccggagcaagccgcacct 677 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 20 gcagccggagaagcggtcggggttccggaagagcttcccggggctgttcaaggagcacgg 79 |||||||||||||| ||| |||||| ||||||||||| || | |||||||| || || Sbjct: 102 gcagccggagaagctgtccgggttcaggaagagcttcaatggcttcttcaaggatcatgg 161 Query: 80 cggcgtgatggagcggtgcgaggacgagtacatgctgcacctggccgccgagttctc 136 |||||| || ||| ||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 162 cggcgtcatcgagaagtgcgaggaggagtacatgctccacctcgccgccgagttctc 218
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 274 bits (138), Expect = 3e-70 Identities = 198/218 (90%) Strand = Plus / Minus Query: 145 agaacctgatggtgctgtgggcgatgcacccgtgggagcgcgacgcccgcctcgcgcacc 204 |||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 144409 agaacctgatggtgatgtgggcgatgcacccgtgggagcgcgacgcgcggctggcgcacc 144350 Query: 205 acgtcctccaccaggcccacccctccgccatcgtcgtggagatcgcctgcacccgctccg 264 |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||| | | Sbjct: 144349 acgtgctccaccaggcgcacccggcggccatcgtcgtggagatcgcttgcacccggacgg 144290 Query: 265 ccgaggagctcctcggcgcgcgcaaggcctacatggcgctcttccaccactccctcgagg 324 | ||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||| Sbjct: 144289 cggaggagctcctcggcgctcgcaaggcgtaccaggcgctgttccaccactccctcgagg 144230 Query: 325 aggacgtcgcctaccgcgccaaggacaagccctactgc 362 ||||||||||||||||||||| |||||||||||||||| Sbjct: 144229 aggacgtcgcctaccgcgccagggacaagccctactgc 144192 Score = 125 bits (63), Expect = 2e-25 Identities = 151/179 (84%), Gaps = 6/179 (3%) Strand = Plus / Minus Query: 366 ctgctggtggggctggtgagcgcgtaccggtacgaagggcccaaggtgagcgacgacacg 425 |||||||| |||||||||||||||||||||||||| || || | ||||||||| || ||| Sbjct: 144090 ctgctggtcgggctggtgagcgcgtaccggtacgagggcccgagggtgagcgaggagacg 144031 Query: 426 gccaaggcggaggccaaggcgctgggagcggcggtgaagagcgccg-----acggcggc- 479 || |||||||| |||||||| | || |||||||||||||||| ||||||| Sbjct: 144030 gcgcgcgcggaggcgaaggcgctcgtcgccgcggtgaagagcgccggccacgcggcggcg 143971 Query: 480 aagctggtggagaacgacgaggtggtaaggatcctcaccaccaggagcaagcctcacct 538 |||||||||||||||||||| || || ||||||||||||||| |||||||||| ||||| Sbjct: 143970 aagctggtggagaacgacgacgtcgtcaggatcctcaccacccggagcaagccgcacct 143912 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 20 gcagccggagaagcggtcggggttccggaagagcttcccggggctgttcaaggagcacgg 79 |||||||||||||| ||| |||||| ||||||||||| || | |||||||| || || Sbjct: 144638 gcagccggagaagctgtccgggttcaggaagagcttcaatggcttcttcaaggatcatgg 144579 Query: 80 cggcgtgatggagcggtgcgaggacgagtacatgctgcacctggccgccgagttctcccg 139 |||||| || ||| ||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 144578 cggcgtcatcgagaagtgcgaggaggagtacatgctccacctcgccgccgagttctcgcg 144519 Query: 140 gttcaag 146 ||||||| Sbjct: 144518 gttcaag 144512
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 274 bits (138), Expect = 3e-70 Identities = 198/218 (90%) Strand = Plus / Minus Query: 145 agaacctgatggtgctgtgggcgatgcacccgtgggagcgcgacgcccgcctcgcgcacc 204 |||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 18351197 agaacctgatggtgatgtgggcgatgcacccgtgggagcgcgacgcgcggctggcgcacc 18351138 Query: 205 acgtcctccaccaggcccacccctccgccatcgtcgtggagatcgcctgcacccgctccg 264 |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||| | | Sbjct: 18351137 acgtgctccaccaggcgcacccggcggccatcgtcgtggagatcgcttgcacccggacgg 18351078 Query: 265 ccgaggagctcctcggcgcgcgcaaggcctacatggcgctcttccaccactccctcgagg 324 | ||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||| Sbjct: 18351077 cggaggagctcctcggcgctcgcaaggcgtaccaggcgctgttccaccactccctcgagg 18351018 Query: 325 aggacgtcgcctaccgcgccaaggacaagccctactgc 362 ||||||||||||||||||||| |||||||||||||||| Sbjct: 18351017 aggacgtcgcctaccgcgccagggacaagccctactgc 18350980 Score = 125 bits (63), Expect = 2e-25 Identities = 151/179 (84%), Gaps = 6/179 (3%) Strand = Plus / Minus Query: 366 ctgctggtggggctggtgagcgcgtaccggtacgaagggcccaaggtgagcgacgacacg 425 |||||||| |||||||||||||||||||||||||| || || | ||||||||| || ||| Sbjct: 18350878 ctgctggtcgggctggtgagcgcgtaccggtacgagggcccgagggtgagcgaggagacg 18350819 Query: 426 gccaaggcggaggccaaggcgctgggagcggcggtgaagagcgccg-----acggcggc- 479 || |||||||| |||||||| | || |||||||||||||||| ||||||| Sbjct: 18350818 gcgcgcgcggaggcgaaggcgctcgtcgccgcggtgaagagcgccggccacgcggcggcg 18350759 Query: 480 aagctggtggagaacgacgaggtggtaaggatcctcaccaccaggagcaagcctcacct 538 |||||||||||||||||||| || || ||||||||||||||| |||||||||| ||||| Sbjct: 18350758 aagctggtggagaacgacgacgtcgtcaggatcctcaccacccggagcaagccgcacct 18350700 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 20 gcagccggagaagcggtcggggttccggaagagcttcccggggctgttcaaggagcacgg 79 |||||||||||||| ||| |||||| ||||||||||| || | |||||||| || || Sbjct: 18351426 gcagccggagaagctgtccgggttcaggaagagcttcaatggcttcttcaaggatcatgg 18351367 Query: 80 cggcgtgatggagcggtgcgaggacgagtacatgctgcacctggccgccgagttctcccg 139 |||||| || ||| ||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 18351366 cggcgtcatcgagaagtgcgaggaggagtacatgctccacctcgccgccgagttctcgcg 18351307 Query: 140 gttcaag 146 ||||||| Sbjct: 18351306 gttcaag 18351300
>dbj|AK068231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147O19, full insert sequence Length = 472 Score = 121 bits (61), Expect = 2e-24 Identities = 149/177 (84%), Gaps = 6/177 (3%) Strand = Plus / Plus Query: 368 gctggtggggctggtgagcgcgtaccggtacgaagggcccaaggtgagcgacgacacggc 427 |||||| |||||||||||||||||||||||||| || || | ||||||||| || ||||| Sbjct: 2 gctggtcgggctggtgagcgcgtaccggtacgagggcccgagggtgagcgaggagacggc 61 Query: 428 caaggcggaggccaaggcgctgggagcggcggtgaagagcgccg-----acggcggc-aa 481 |||||||| |||||||| | || |||||||||||||||| ||||||| || Sbjct: 62 gcgcgcggaggcgaaggcgctcgtcgccgcggtgaagagcgccggccacgcggcggcgaa 121 Query: 482 gctggtggagaacgacgaggtggtaaggatcctcaccaccaggagcaagcctcacct 538 |||||||||||||||||| || || ||||||||||||||| |||||||||| ||||| Sbjct: 122 gctggtggagaacgacgacgtcgtcaggatcctcaccacccggagcaagccgcacct 178
>ref|XM_470642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 543 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 gcgccgacggcggcaagctggtgg 489 |||||||||||||||||||||||| Sbjct: 431 gcgccgacggcggcaagctggtgg 454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 gcgccgacggcggcaagctggtgg 489 |||||||||||||||||||||||| Sbjct: 7244742 gcgccgacggcggcaagctggtgg 7244765
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 gcgccgacggcggcaagctggtgg 489 |||||||||||||||||||||||| Sbjct: 7242637 gcgccgacggcggcaagctggtgg 7242660
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 gcgccgacggcggcaagctggtgg 489 |||||||||||||||||||||||| Sbjct: 71495 gcgccgacggcggcaagctggtgg 71518
>dbj|AK068960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N17, full insert sequence Length = 747 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 gcgccgacggcggcaagctggtgg 489 |||||||||||||||||||||||| Sbjct: 346 gcgccgacggcggcaagctggtgg 369
>dbj|AK058844.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-F11, full insert sequence Length = 1005 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 466 gcgccgacggcggcaagctggtgg 489 |||||||||||||||||||||||| Sbjct: 545 gcgccgacggcggcaagctggtgg 568
>ref|NM_186003.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 367 tgctggtggggctggtgagcgcgtaccggtacga 400 |||||||| ||||||||||| ||||||| ||||| Sbjct: 395 tgctggtgaggctggtgagctcgtaccgctacga 428
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 478 gcaagctggtggagaacgacgaggtg 503 ||||||||||||||| |||||||||| Sbjct: 3959196 gcaagctggtggagagcgacgaggtg 3959221
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 agagcgccgacggcggcaagctggtg 488 ||||||||||||||||| |||||||| Sbjct: 202579 agagcgccgacggcggcgagctggtg 202604
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 agagcgccgacggcggcaagctggtg 488 ||||||||||||||||| |||||||| Sbjct: 222042 agagcgccgacggcggcgagctggtg 222067
>gb|AF357159.1|AF357159 Mycobacterium tuberculosis isolate DS41 unknown sequence Length = 874 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 agagcgccgacggcggcaagctggtg 488 ||||||||||||||||| |||||||| Sbjct: 310 agagcgccgacggcggcgagctggtg 335
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Minus Query: 367 tgctggtggggctggtgagcgcgtaccggtacga 400 |||||||| ||||||||||| ||||||| ||||| Sbjct: 27747752 tgctggtgaggctggtgagctcgtaccgctacga 27747719
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Minus Query: 367 tgctggtggggctggtgagcgcgtaccggtacga 400 |||||||| ||||||||||| ||||||| ||||| Sbjct: 40131 tgctggtgaggctggtgagctcgtaccgctacga 40098
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Minus Query: 367 tgctggtggggctggtgagcgcgtaccggtacga 400 |||||||| ||||||||||| ||||||| ||||| Sbjct: 126854 tgctggtgaggctggtgagctcgtaccgctacga 126821
>gb|AY449458.1| Oikopleura dioica clone BACOIKO002 4xj18, complete sequence Length = 188193 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 165 gcgatgcacccgtgggagcgcgacgcccgc 194 |||||||||| ||||||||||| ||||||| Sbjct: 79957 gcgatgcacctgtgggagcgcgtcgcccgc 79986
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ccgccatcgtcgtggagatcg 249 ||||||||||||||||||||| Sbjct: 68368 ccgccatcgtcgtggagatcg 68348
>ref|XM_604958.2| PREDICTED: Bos taurus similar to Proteinase activated receptor 1 precursor (PAR-1) (Thrombin receptor) (Coagulation factor II receptor) (LOC526585), mRNA Length = 3515 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gtacatgctgcacctggccgc 127 ||||||||||||||||||||| Sbjct: 573 gtacatgctgcacctggccgc 593
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ccgccatcgtcgtggagatcg 249 ||||||||||||||||||||| Sbjct: 18333003 ccgccatcgtcgtggagatcg 18332983
>gb|AY134848.1| Comamonas sp. SFCD1 sulphoacetaldehyde acetyltransferase (xsc) gene, partial cds Length = 1782 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 gccaaggcggaggccaaggcgctgg 450 |||||||||| |||||||||||||| Sbjct: 961 gccaaggcggtggccaaggcgctgg 985
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cgcccgcctcgcgcaccacgtcctc 212 ||||||||||||||| ||||||||| Sbjct: 127334 cgcccgcctcgcgcagcacgtcctc 127358 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gacgcccgcctcgcgcacca 205 |||||||||||||||||||| Sbjct: 854313 gacgcccgcctcgcgcacca 854294
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ccgccatcgtcgtggagatcg 249 ||||||||||||||||||||| Sbjct: 18492404 ccgccatcgtcgtggagatcg 18492384
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gagcgcgacgcccgcctcgcg 200 ||||||||||||||||||||| Sbjct: 595421 gagcgcgacgcccgcctcgcg 595441
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 gctgttcaaggagcacggcggcgtgatg 89 |||||||||||| |||||||||||||| Sbjct: 484028 gctgttcaaggaagacggcggcgtgatg 484055
>ref|XM_514994.1| PREDICTED: Pan troglodytes similar to kelch-like (LOC458666), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 aggcgctgggagcggcggtg 461 |||||||||||||||||||| Sbjct: 1688 aggcgctgggagcggcggtg 1707
>gb|AF525118.1| Ornithorhynchus anatinus isolate OranVL18 immunoglobulin lambda light chain mRNA, partial cds Length = 417 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 agccggagaagcggtcgggg 41 |||||||||||||||||||| Sbjct: 247 agccggagaagcggtcgggg 228
>ref|XM_450687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1057 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgcctgcacccgctccgccg 267 |||||||||||||||||||| Sbjct: 828 cgcctgcacccgctccgccg 809
>ref|XM_527244.1| PREDICTED: Pan troglodytes similar to SRY (sex determining region Y)-box 4; SRY-related HMG-box gene 4; ecotropic viral integration site 16 (LOC471866), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 aggcggaggccaaggcgctgggag 453 ||||||||||| |||||||||||| Sbjct: 814 aggcggaggccgaggcgctgggag 791
>ref|XM_473757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 cggccaaggcggaggccaag 443 |||||||||||||||||||| Sbjct: 194 cggccaaggcggaggccaag 213
>ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA Length = 4912 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 aggcggaggccaaggcgctgggag 453 ||||||||||| |||||||||||| Sbjct: 1608 aggcggaggccgaggcgctgggag 1585
>gb|AY645945.1| Triticum aestivum floral homeotic protein (Q) mRNA, complete cds Length = 1730 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 426 cgaggagctcctcggcgcgc 407
>ref|XM_604404.2| PREDICTED: Bos taurus similar to Surfeit locus protein 4 (LOC526045), mRNA Length = 3443 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 caccaccaggagcaagcctc 534 |||||||||||||||||||| Sbjct: 1014 caccaccaggagcaagcctc 995
>ref|XM_872943.1| PREDICTED: Bos taurus similar to surfeit 2, transcript variant 2 (LOC526046), mRNA Length = 3192 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 caccaccaggagcaagcctc 534 |||||||||||||||||||| Sbjct: 3127 caccaccaggagcaagcctc 3146
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cgcgcaccacgtcctccacc 216 |||||||||||||||||||| Sbjct: 2177765 cgcgcaccacgtcctccacc 2177784
>ref|XM_365096.1| Magnaporthe grisea 70-15 hypothetical protein (MG09941.4) partial mRNA Length = 4728 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 cgacgacacggccaaggcgg 435 |||||||||||||||||||| Sbjct: 1272 cgacgacacggccaaggcgg 1291
>ref|XM_614758.2| PREDICTED: Bos taurus hypothetical LOC534844 (LOC534844), mRNA Length = 1229 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tgctggtggggctggtgagc 386 |||||||||||||||||||| Sbjct: 901 tgctggtggggctggtgagc 882
>gb|BC072668.1| Homo sapiens SRY (sex determining region Y)-box 4, mRNA (cDNA clone MGC:71240 IMAGE:6584346), complete cds Length = 2107 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 aggcggaggccaaggcgctgggag 453 ||||||||||| |||||||||||| Sbjct: 1428 aggcggaggccgaggcgctgggag 1405
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 gccaaggcggaggccaaggcgctg 449 |||||||||| ||||||||||||| Sbjct: 1788049 gccaaggcggtggccaaggcgctg 1788072
>gb|AF389755.1| Uncultured bacterium clone NIW6-2 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389760.1| Uncultured bacterium clone NIW4-4 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389784.1| Uncultured bacterium clone NIS13-2 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389785.1| Uncultured bacterium clone NIS13-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389786.1| Uncultured bacterium clone NIS12-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389787.1| Uncultured bacterium clone NIS12-2 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389788.1| Uncultured bacterium clone NIS12-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389791.1| Uncultured bacterium clone NIS11-2 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389795.1| Uncultured bacterium clone NIS10-2 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389797.1| Uncultured bacterium clone NIS9-2 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF389801.1| Uncultured bacterium clone NIS8-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 137 tgctgcacctggccgccgag 156
>gb|AF438482.1| Homo sapiens non-classical cadherin XB31alpha1 (XB31alpha) mRNA, complete cds Length = 4965 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 cacccgctccgccgaggagc 273 |||||||||||||||||||| Sbjct: 119 cacccgctccgccgaggagc 100
>ref|XM_548390.2| PREDICTED: Canis familiaris similar to Surfeit locus protein 4 (LOC491269), mRNA Length = 1927 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 caccaccaggagcaagcctc 534 |||||||||||||||||||| Sbjct: 771 caccaccaggagcaagcctc 752
>emb|AL357140.33| Human DNA sequence from clone RP11-84A14 on chromosome 1 Contains the 5' end of the CLSTN1 gene for calsyntenin 1, the CTNNBIP1 gene for catenin, beta interacting protein 1, two novel genes, the LZIC gene for leucine zipper and CTNNBIP1 domain containing, the 5' end of the NMNAT1 gene for nicotinamide nucleotide adenylyltransferase 1 and a CpG island, complete sequence Length = 177470 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 cacccgctccgccgaggagc 273 |||||||||||||||||||| Sbjct: 29241 cacccgctccgccgaggagc 29260
>emb|AL136179.15| Human DNA sequence from clone RP3-322L4 on chromosome 6 Contains the SOX4 gene for SRY (sex determining region Y)-box 4, a novel pseudogene and CpG islands, complete sequence Length = 128728 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 aggcggaggccaaggcgctgggag 453 ||||||||||| |||||||||||| Sbjct: 11046 aggcggaggccgaggcgctgggag 11023
>gb|AY113145.1| Tachyglossus aculeatus clone TaacVL134 immunoglobulin lambda light chain mRNA, partial cds Length = 436 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 agccggagaagcggtcgggg 41 |||||||||||||||||||| Sbjct: 291 agccggagaagcggtcgggg 272
>gb|AY113116.1| Tachyglossus aculeatus clone TaacVL37 immunoglobulin lambda light chain mRNA, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 agccggagaagcggtcgggg 41 |||||||||||||||||||| Sbjct: 286 agccggagaagcggtcgggg 267
>emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein Length = 2797 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 aggcggaggccaaggcgctgggag 453 ||||||||||| |||||||||||| Sbjct: 1164 aggcggaggccgaggcgctgggag 1141
>emb|X63352.1|RCFDXD R.capsulatus fdxD, nifH and nifD (5'end) genes Length = 2423 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 1466 tgctgcacctggccgccgag 1485
>emb|X07866.1|RCNIFH Rhodobacter capsulatus nifH gene Length = 1040 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 268 tgctgcacctggccgccgag 287
>emb|BX001064.3| Mouse DNA sequence from clone RP23-65P18 on chromosome 4 Contains an immediate early response 3 (Ier3) pseudogene, complete sequence Length = 136981 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 atcctcaccaccaggagcaa 529 |||||||||||||||||||| Sbjct: 52207 atcctcaccaccaggagcaa 52226
>ref|NM_014944.3| Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 2, mRNA Length = 5179 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 cacccgctccgccgaggagc 273 |||||||||||||||||||| Sbjct: 119 cacccgctccgccgaggagc 100
>ref|NM_001009566.1| Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 1, mRNA Length = 5209 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 cacccgctccgccgaggagc 273 |||||||||||||||||||| Sbjct: 119 cacccgctccgccgaggagc 100
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 ccggtacgaagggcccaagg 411 |||||||||||||||||||| Sbjct: 1883250 ccggtacgaagggcccaagg 1883269
>gb|DQ140718.1| Uncultured bacterium clone nif1003323U12 dinitrogen reductase-like (nifH) gene, partial sequence Length = 326 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 41 tgctgcacctggccgccgag 60
>gb|DQ140602.1| Uncultured bacterium clone nif1003301M20 dinitrogen reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 41 tgctgcacctggccgccgag 60
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 cggccaaggcggaggccaag 443 |||||||||||||||||||| Sbjct: 30323565 cggccaaggcggaggccaag 30323546
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgcctgcacccgctccgccg 267 |||||||||||||||||||| Sbjct: 12242152 cgcctgcacccgctccgccg 12242171
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ggcggaggccaaggcgctgg 450 |||||||||||||||||||| Sbjct: 7111391 ggcggaggccaaggcgctgg 7111372
>gb|AY714341.1| Triticum aestivum subsp. spelta type European floral homeotic protein (Q) gene, complete cds Length = 3585 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 298 cgaggagctcctcggcgcgc 279
>gb|AY714340.1| Triticum aestivum subsp. spelta type Iranian floral homeotic protein (Q) gene, complete cds Length = 3588 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 298 cgaggagctcctcggcgcgc 279
>gb|AY714339.1| Triticum turgidum subsp. polonicum floral homeotic protein (Q) gene, complete cds Length = 3588 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 298 cgaggagctcctcggcgcgc 279
>gb|AY702959.1| Triticum turgidum subsp. carthlicum floral homeotic protein (Q) gene, complete cds Length = 3588 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 298 cgaggagctcctcggcgcgc 279
>gb|AY702957.1| Triticum turgidum subsp. dicoccoides floral homeotic protein (Q) gene, complete cds Length = 3732 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 439 cgaggagctcctcggcgcgc 420
>gb|AY702956.1| Triticum aestivum floral homeotic protein (Q) gene, complete cds Length = 3729 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 439 cgaggagctcctcggcgcgc 420
>gb|AY702955.1| Triticum turgidum floral homeotic protein (Q) gene, complete cds Length = 4958 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgaggagctcctcggcgcgc 285 |||||||||||||||||||| Sbjct: 456 cgaggagctcctcggcgcgc 437
>ref|XM_234547.3| PREDICTED: Rattus norvegicus amnionless (predicted) (Amn_predicted), mRNA Length = 1596 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 ggagaagcggtcggggttccggaagagc 53 ||||||||||||||| || ||||||||| Sbjct: 549 ggagaagcggtcgggattgcggaagagc 522
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gctggtggggctggtgagcg 387 |||||||||||||||||||| Sbjct: 2204156 gctggtggggctggtgagcg 2204175
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tcgcctaccgcgccaaggac 350 |||||||||||||||||||| Sbjct: 8948051 tcgcctaccgcgccaaggac 8948070
>dbj|AB079629.1| Rhodovulum strictum nifH gene for nitrogenase, partial cds, strain:JCM 9221 Length = 461 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 161 tgctgcacctggccgccgag 180
>dbj|AB079628.1| Rhodovulum strictum nifH gene for nitrogenase, partial cds, strain:JCM 9220 Length = 461 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 161 tgctgcacctggccgccgag 180
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgcctgcacccgctccgccg 267 |||||||||||||||||||| Sbjct: 25706 cgcctgcacccgctccgccg 25725
>dbj|AB020718.1| Homo sapiens mRNA for KIAA0911 protein, partial cds Length = 5219 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 cacccgctccgccgaggagc 273 |||||||||||||||||||| Sbjct: 153 cacccgctccgccgaggagc 134
>gb|AF052223.1|AF052223 Lolium perenne 4-coumarate--CoA ligase 4CL3 mRNA, complete cds Length = 2038 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccatcgtcgtggagatcgcc 251 |||||||||||||||||||| Sbjct: 984 ccatcgtcgtggagatcgcc 1003
>dbj|AK108199.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C10, full insert sequence Length = 1057 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgcctgcacccgctccgccg 267 |||||||||||||||||||| Sbjct: 828 cgcctgcacccgctccgccg 809
>ref|XM_306668.2| Anopheles gambiae str. PEST ENSANGP00000000051 (ENSANGG00000000051), partial mRNA Length = 1035 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 gccaaggcggaggccaaggcgctg 449 |||||||||| ||||||||||||| Sbjct: 667 gccaaggcggtggccaaggcgctg 690
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 180 gagcgcgacgcccgcctcgcgcaccacgtcct 211 ||||||||||||| |||||||||| |||||| Sbjct: 1531340 gagcgcgacgcccagctcgcgcacctcgtcct 1531309
>dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C12, full insert sequence Length = 1471 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 cggccaaggcggaggccaag 443 |||||||||||||||||||| Sbjct: 297 cggccaaggcggaggccaag 316
>dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and AOX1a genes, complete cds Length = 7421 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 cggccaaggcggaggccaag 443 |||||||||||||||||||| Sbjct: 4724 cggccaaggcggaggccaag 4743
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ccgcctcgcgcaccacgtcc 210 |||||||||||||||||||| Sbjct: 1225257 ccgcctcgcgcaccacgtcc 1225238
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 cggccaaggcggaggccaag 443 |||||||||||||||||||| Sbjct: 73461 cggccaaggcggaggccaag 73442
>gb|M15270.1|RCANIFHD Rhodobacter capsulatus nifH gene encoding dinitrogenase reductase and nifD gene encoding the alpha subunit of dinitrogenase Length = 2466 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tgctgcacctggccgccgag 131 |||||||||||||||||||| Sbjct: 191 tgctgcacctggccgccgag 210
>dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, complete cds Length = 1256 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 cggccaaggcggaggccaag 443 |||||||||||||||||||| Sbjct: 278 cggccaaggcggaggccaag 297
>dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRNA for alternative oxidase, complete cds Length = 1459 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 cggccaaggcggaggccaag 443 |||||||||||||||||||| Sbjct: 285 cggccaaggcggaggccaag 304 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,859,662 Number of Sequences: 3902068 Number of extensions: 3859662 Number of successful extensions: 88335 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85986 Number of HSP's gapped (non-prelim): 2336 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)