ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart36d02 |
|---|---|
| Clone Library Name | barley_pub |
>VATD_ARATH (Q9XGM1) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 261 Score = 202 bits (514), Expect = 4e-52 Identities = 103/141 (73%), Positives = 119/141 (84%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 M+GQ RLNVVPTVTMLGV+KARL+GATRGHALLKKKSDALTVQFRA+LKKIV KESMG Sbjct: 1 MAGQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMG 60 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 + M+ SSF+L E KYVAGD V+HVVL++V+ A+L+VRS EN+AGVKLPKF HF + G Sbjct: 61 DMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSE--GE 118 Query: 432 SSPSLTGLARGGQQVSACRAA 494 + LTGLARGGQQV ACR A Sbjct: 119 TKNDLTGLARGGQQVRACRVA 139
>VATD_SUBDO (P57747) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 250 Score = 132 bits (333), Expect = 4e-31 Identities = 74/139 (53%), Positives = 102/139 (73%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ R+NV P+ L ++KARL GA +GH+LLK+K+DALT++FR IL KI+ TK MG Sbjct: 1 MSGK-DRINVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 E M+ ++FSLAEAK+VAGD +VLQ+V A +R+ + ++NVAGV LP F + D G+ Sbjct: 60 EVMKEATFSLAEAKFVAGD-FSEMVLQNVDKAKIRLHTKKDNVAGVTLPVFETYSD--GS 116 Query: 432 SSPSLTGLARGGQQVSACR 488 + LTGL+RGGQ VS C+ Sbjct: 117 DTYELTGLSRGGQLVSKCK 135
>VATD_PONPY (Q5RCS8) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 247 Score = 126 bits (317), Expect = 3e-29 Identities = 71/136 (52%), Positives = 96/136 (70%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 432 SSPSLTGLARGGQQVS 479 S LTGLARGG+Q++ Sbjct: 117 DSYELTGLARGGEQLA 132
>VATD_MOUSE (P57746) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 126 bits (317), Expect = 3e-29 Identities = 71/136 (52%), Positives = 96/136 (70%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 432 SSPSLTGLARGGQQVS 479 S LTGLARGG+Q++ Sbjct: 117 DSYELTGLARGGEQLA 132
>VATD_HUMAN (Q9Y5K8) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 126 bits (317), Expect = 3e-29 Identities = 71/136 (52%), Positives = 96/136 (70%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 432 SSPSLTGLARGGQQVS 479 S LTGLARGG+Q++ Sbjct: 117 DSYELTGLARGGEQLA 132
>VATD_BOVIN (P39942) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 126 bits (317), Expect = 3e-29 Identities = 71/136 (52%), Positives = 96/136 (70%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 432 SSPSLTGLARGGQQVS 479 S LTGLARGG+Q++ Sbjct: 117 DSYELTGLARGGEQLA 132
>VATD_RABIT (O97755) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 125 bits (313), Expect = 8e-29 Identities = 70/136 (51%), Positives = 95/136 (69%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 E MR ++FSLAEAK+ AGD +Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 432 SSPSLTGLARGGQQVS 479 S LTGLARGG+Q++ Sbjct: 117 DSYELTGLARGGEQLA 132
>VATD_MANSE (Q9U0S4) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 246 Score = 124 bits (310), Expect = 2e-28 Identities = 70/136 (51%), Positives = 94/136 (69%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ RL + P+ ++K RL GA +GH LLKKK+DAL V+FR IL KI+ TK MG Sbjct: 1 MSGK-DRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 E M+ ++FSLAEAK+ GD VVLQ+V A +++RS ++NVAGV LP F + D G+ Sbjct: 60 EVMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQD--GS 116 Query: 432 SSPSLTGLARGGQQVS 479 + L GLARGGQQ++ Sbjct: 117 DTYELAGLARGGQQLA 132
>VATD1_DROME (Q9V7D2) Vacuolar ATP synthase subunit D 1 (EC 3.6.3.14) (V-ATPase| D subunit 1) (Vacuolar proton pump D subunit 1) (dV-ATPase D) Length = 246 Score = 123 bits (309), Expect = 2e-28 Identities = 68/136 (50%), Positives = 97/136 (71%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG+ RL + P+ ++KARL GA +GH LLKKK+DAL ++FR IL KI+ TK MG Sbjct: 1 MSGK-DRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMG 59 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 + M+ ++FSLAEAK+ +GD + VVLQ+V A +++R+ ++NVAGV LP F + D G+ Sbjct: 60 DVMKEAAFSLAEAKFTSGD-INQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQD--GS 116 Query: 432 SSPSLTGLARGGQQVS 479 + L GLARGGQQ++ Sbjct: 117 DTYELAGLARGGQQLA 132
>VATD_NEUCR (O59941) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 264 Score = 120 bits (302), Expect = 2e-27 Identities = 64/139 (46%), Positives = 87/139 (62%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG R V PT LG++KA+L GA GH+LLK+KS+ALT +FR I ++I K MG Sbjct: 1 MSGAADREAVFPTRQSLGIMKAKLKGAETGHSLLKRKSEALTKRFREITRRIDEAKRKMG 60 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 M+ +S SLAE Y G + + + +S +SA R+R+ QENV+GV LP F + G Sbjct: 61 RVMQIASLSLAEVTYAVGGNIGYQIQESAKSARFRIRAKQENVSGVLLPAFEAY-QAEGN 119 Query: 432 SSPSLTGLARGGQQVSACR 488 ++TGL +GGQQV CR Sbjct: 120 DDFAMTGLGKGGQQVQRCR 138
>VATD2_DROME (Q9NEF6) Probable vacuolar ATP synthase subunit D 2 (EC 3.6.3.14)| (V-ATPase D subunit 2) (Vacuolar proton pump D subunit 2) Length = 249 Score = 120 bits (302), Expect = 2e-27 Identities = 63/130 (48%), Positives = 91/130 (70%) Frame = +3 Query: 90 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 269 RL + P+ ++K+RL GAT+GH LLKKK+DAL ++FR IL KI+ TK MG+ M+ + Sbjct: 6 RLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEA 65 Query: 270 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASSPSLT 449 +FSLAE K+ GD + +VLQ+V A +++R+ ++NVAGV LP F + D G + L Sbjct: 66 AFSLAEVKFTTGD-INQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTD--GVDTYELA 122 Query: 450 GLARGGQQVS 479 GLARGGQQ++ Sbjct: 123 GLARGGQQLA 132
>VATD_CANAL (P87220) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 267 Score = 117 bits (292), Expect = 2e-26 Identities = 64/139 (46%), Positives = 89/139 (64%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG R V PT LGV+K++L GA +GH+LLK+KS+ALT +FR I ++I K MG Sbjct: 1 MSGAGNREQVFPTRMTLGVMKSKLKGAQQGHSLLKRKSEALTKRFRDITQRIDDAKRKMG 60 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 M+ ++FSLAE +Y GD + + V +SV+ A V++ QENV+GV LP F ++ Sbjct: 61 RVMQTAAFSLAEVQYATGDNISYQVQESVQKARFTVKAKQENVSGVFLPTFDSHIN-EDV 119 Query: 432 SSPSLTGLARGGQQVSACR 488 + LT LARGGQQV + Sbjct: 120 NDFKLTALARGGQQVQKAK 138
>VATD_YEAST (P32610) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 256 Score = 116 bits (291), Expect = 3e-26 Identities = 63/139 (45%), Positives = 92/139 (66%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 MSG ++ V PT LG++K +L GA +G++LLK+KS+ALT +FR I K+I K+ MG Sbjct: 1 MSGNREQ--VFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMG 58 Query: 252 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 M+ ++FSLAE Y G+ + + V +SV +A +VR+ QENV+GV L +F ++DP Sbjct: 59 RVMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPE-I 117 Query: 432 SSPSLTGLARGGQQVSACR 488 + LTGL RGGQQV + Sbjct: 118 NDFRLTGLGRGGQQVQRAK 136
>VATD_CAEEL (P34462) Probable vacuolar ATP synthase subunit D (EC 3.6.3.14)| (V-ATPase D subunit) (Vacuolar proton pump D subunit) Length = 257 Score = 115 bits (288), Expect = 7e-26 Identities = 65/134 (48%), Positives = 87/134 (64%) Frame = +3 Query: 78 GQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEA 257 G R+ V P+ ++K RL GA +GH+LLKKK+DAL ++FR IL+KIV K MGE Sbjct: 4 GGKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEV 63 Query: 258 MRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASS 437 M+ ++FSLAEAK+ AGD H V+Q+V A RVR +ENV GV LP F + D G + Sbjct: 64 MKEAAFSLAEAKFTAGD-FSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQD--GPDA 120 Query: 438 PSLTGLARGGQQVS 479 LTGL +GG ++ Sbjct: 121 YDLTGLGKGGANIA 134
>VATD_SCHPO (O59823) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 285 Score = 108 bits (271), Expect = 6e-24 Identities = 60/134 (44%), Positives = 82/134 (61%) Frame = +3 Query: 87 QRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRA 266 QR NV PT L +K RL GA GH+LLK+KS+AL +FR I+ I K+ MG M+ Sbjct: 5 QRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGRVMQI 64 Query: 267 SSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASSPSL 446 ++FS+AE + G+ + + QSV+ LRVRS QEN++GV LP F +D + L Sbjct: 65 AAFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEMNLDES-IDDFQL 123 Query: 447 TGLARGGQQVSACR 488 TGL +GGQQ+ R Sbjct: 124 TGLGKGGQQIQKAR 137
>VATD_PYRKO (Q5JIR1) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 47.0 bits (110), Expect = 3e-05 Identities = 34/102 (33%), Positives = 50/102 (49%) Frame = +3 Query: 93 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 272 LNV PT L +K R+ A +GH LLK K DAL ++F I + + +E + E M + Sbjct: 5 LNVKPTRMELLNLKRRITLAKKGHKLLKDKQDALVMEFFTIYDEALRLREELNEKMMEAF 64 Query: 273 FSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 398 +L A+ G + SV+ + V NV GV +P Sbjct: 65 KALQRAEIDVGTLRMKEISLSVK-PNREVEVKTRNVMGVPVP 105
>NTPD_ENTHR (P43435) V-type sodium ATP synthase subunit D (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit D) Length = 230 Score = 44.7 bits (104), Expect = 1e-04 Identities = 30/103 (29%), Positives = 54/103 (52%) Frame = +3 Query: 90 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 269 RLNV PT L +K +L ATRGH LLK K D L QF +++K ++++ + + + Sbjct: 2 RLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTA 61 Query: 270 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 398 AK + +L ++ + ++ + ++N+ VK+P Sbjct: 62 MKDFVLAKSTVEEAFIDELL-ALPAENVSISVVEKNIMSVKVP 103
>VATD_STRP8 (Q8P2U4) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 44.3 bits (103), Expect = 2e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 90 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 269 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTLEKELAAN 62 Query: 270 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 404 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_STRP6 (Q5XE48) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 44.3 bits (103), Expect = 2e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 90 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 269 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTLEKELAAN 62 Query: 270 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 404 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_STRP3 (Q8K8T0) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 43.9 bits (102), Expect = 2e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 90 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 269 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTIEKELAAN 62 Query: 270 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 404 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_STRP1 (Q9A1Q1) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 43.9 bits (102), Expect = 2e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 90 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 269 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTIEKELAAN 62 Query: 270 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 404 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_DEIRA (Q9RWG6) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 224 Score = 43.9 bits (102), Expect = 2e-04 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 1/111 (0%) Frame = +3 Query: 72 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 251 M+GQ + PT + L KA L A G LLK+K DAL +F A++K +A +E + Sbjct: 1 MAGQ-----ISPTRSALLASKASLKTANGGADLLKRKRDALIGEFFALVKDALAAREQLS 55 Query: 252 EAMRASSFSLAEAKYVAGDGVRHV-VLQSVRSASLRVRSHQENVAGVKLPK 401 + + SL AK A D V L + V E++ GVK+PK Sbjct: 56 SVSKGAYTSLFGAK--AWDSPEAVESLSLAGTGDYAVDMQIESIYGVKVPK 104
>VATD_ARCFU (O29099) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 209 Score = 43.5 bits (101), Expect = 3e-04 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Frame = +3 Query: 99 VVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFS 278 V PT L ++ R+ ATRGHALLK K D L ++FR +L++ M + + Sbjct: 4 VQPTRMELIKLRRRIKMATRGHALLKMKRDGLIMEFRQLLEEAKEVIGGMVQKYEKAQSK 63 Query: 279 LAEAKYVAGDGVRHVVLQSVRSASLRV----RSHQENVAGVKLP 398 LA A +A DG+ V ++S+ + ++ ++N+ GV +P Sbjct: 64 LALA--IAVDGI--VAVRSIALSCCQIPPEFSMKRKNIMGVVVP 103
>VATD_METKA (Q8TUS9) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 232 Score = 42.7 bits (99), Expect = 5e-04 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 1/113 (0%) Frame = +3 Query: 96 NVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSF 275 +V PT L ++ R+ A +GH LLK+K DAL ++F ++K+ +E + + + Sbjct: 8 DVNPTRMELLKLQDRIELAKKGHKLLKEKRDALIMEFFEMVKRASEIREQAVKKLMEAYS 67 Query: 276 SLAEAKYVAGD-GVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 431 LA AK G+ GV + + ++V NV GV +P + G+ Sbjct: 68 KLAAAKVTVGEIGVERASMAT--GEEIKVDVGSRNVMGVVVPIIERVSEDGGS 118
>VATD_PYRFU (Q8U4A4) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 42.7 bits (99), Expect = 5e-04 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 4/106 (3%) Frame = +3 Query: 93 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATK----ESMGEAM 260 L V PT L +K R+ A RGH LLK+K DAL ++F I + ++ + + +GEA Sbjct: 5 LKVKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSMRRELIKKIGEAF 64 Query: 261 RASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 398 A + E V ++ + + + + VRS N+ GV++P Sbjct: 65 EALRLAQVE---VGSVRLKEIAIGVNPNKEIEVRS--RNIMGVRVP 105
>VATD_METJA (Q58032) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 216 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/106 (28%), Positives = 53/106 (50%) Frame = +3 Query: 87 QRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRA 266 QR+N PT L +K ++ A +GH LLK+K DAL ++F I+++ ++ + + Sbjct: 2 QRVN--PTRMELLKLKNKIKLAEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAE 59 Query: 267 SSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 404 + L A+ V G + ++ L V +N+ GV +P F Sbjct: 60 AYKDLIMAQTVMGTLAVKEAALAAKNDKLEVDMDTKNIMGVTVPTF 105
>VATD_PYRAB (Q9UXU9) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Frame = +3 Query: 93 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 272 L + PT L +K R+ A RGH LLK+K DAL ++F I + ++ + + + M + Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64 Query: 273 FSLAEAKYVAGD-GVRHVVLQSVRSASLRVRSHQENVAGVKLP 398 +L A+ G ++ + + + + +R+ N+ GV++P Sbjct: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRT--RNIMGVRVP 105
>VATD_PYRHO (O57731) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Frame = +3 Query: 93 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 272 L + PT L +K R+ A RGH LLK+K DAL ++F I + ++ + + M + Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIRKMEEAF 64 Query: 273 FSLAEAKYVAGD-GVRHVVLQSVRSASLRVRSHQENVAGVKLP 398 SL A+ G ++ + + + + +++ N+ GV++P Sbjct: 65 NSLRRAQVDVGALRLKEIAIGVKPNKEIEIKT--RNIMGVRVP 105
>VATD_DESSY (O06506) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 40.0 bits (92), Expect = 0.004 Identities = 31/102 (30%), Positives = 49/102 (48%) Frame = +3 Query: 93 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 272 LNV PT L +K R+ A +GH LLK K DAL ++F I + + + + M+ + Sbjct: 5 LNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALVMEFFTIYDEALQLRRELNLKMKEAF 64 Query: 273 FSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 398 +L A+ G + SV+ + V + NV V +P Sbjct: 65 EALQMAEIDVGTLRLKEISLSVK-PNREVEIRKRNVMAVPVP 105
>VATD_METMA (Q60188) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 209 Score = 38.9 bits (89), Expect = 0.008 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Frame = +3 Query: 96 NVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSF 275 +V PT + L +K ++ + GH LLK K D L ++F IL + + + A S+ Sbjct: 5 DVKPTRSELINLKKKIKLSESGHKLLKMKRDGLILEFFKILNEARNVRTELDAAFAKSTE 64 Query: 276 SLAEAKYVAG-DGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFT 407 + A V G VR + S +++ H N+ GV +PK + Sbjct: 65 KINLASAVNGMVAVRSTAFTAKESPEIQLSGH--NIMGVVVPKIS 107
>VATD_THET8 (O87880) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 223 Score = 37.4 bits (85), Expect = 0.023 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Frame = +3 Query: 99 VVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFS 278 V PT L + +L A +G LLKKK DAL +F ++++ + ++++ +A + + + Sbjct: 4 VSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAA 63 Query: 279 LAEAKYVAGDGVRHVVLQSVRSASLR-VRSHQENVAGVKLPK 401 L A+ A DG V ++ L V + ENV G K+P+ Sbjct: 64 LLLAQ--AFDGPEVVAGAALGVPPLEGVEAEVENVWGSKVPR 103
>VATD_METAC (Q8TII9) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 209 Score = 35.8 bits (81), Expect = 0.066 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Frame = +3 Query: 96 NVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSF 275 +V PT + L +K ++ + GH LLK K D L ++F IL + + + A S+ Sbjct: 5 DVKPTRSELINLKKKIKLSESGHKLLKMKRDGLILEFFKILNEARNVRTELDAAYEKSTE 64 Query: 276 SLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQE------NVAGVKLPKFT 407 + A V G + +V+S + + + E N+ GV +PK + Sbjct: 65 KINLASAVNG-------MVAVKSTAFTAKEYPEIQLSGHNIMGVVVPKIS 107
>CHEB2_RHOPA (P62644) Chemotaxis response regulator protein-glutamate| methylesterase of group 2 operon (EC 3.1.1.61) Length = 391 Score = 32.7 bits (73), Expect = 0.56 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 10/126 (7%) Frame = +3 Query: 99 VVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFS 278 V P V +L + L G + LL KK D + + + ++ + + S Sbjct: 63 VKPDVAVLDIEMPELDGISALPQLLAKKRDLVVIMASTLTRR--------NAEISFKALS 114 Query: 279 LAEAKYV----------AGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAG 428 L A Y+ A D +H +LQ +RS RVR + V GV P PA Sbjct: 115 LGAADYIPKPETTREPQAADIFKHDLLQKIRSLGGRVR--RRAVPGVAAPAIAREPHPAP 172 Query: 429 ASSPSL 446 P++ Sbjct: 173 LPHPAV 178
>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)| (Episialin) Length = 630 Score = 32.3 bits (72), Expect = 0.73 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 14/133 (10%) Frame = -1 Query: 430 APAGSTKW--VNLGSLTPATFSWWERTRSEAERTDWSTTWRTPSPATYLASASEKEEARM 257 AP ST V+ G+ +PAT + T S + S R P +T A S Sbjct: 141 APVDSTSSPVVHGGTSSPATSPPGDSTSSPDHSSTSSPATRAPEDSTSTAVLSGTSSPAT 200 Query: 256 ASPMDSLVATIFLRMARNCTVSASDFFLSS-------ACPRVAPIRRAFTTP-----SIV 113 +P+DS + + + S S+ SS + P +P+R + ++P SI Sbjct: 201 TAPVDSTSSPVAHDDTSSPATSLSEDSASSPVAHGGTSSPATSPLRDSTSSPVHSSASIQ 260 Query: 112 TVGTTFSLCVCPD 74 + TT L PD Sbjct: 261 NIKTTSDLASTPD 273
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 30.8 bits (68), Expect = 2.1 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Frame = -1 Query: 352 SEAERTDWSTTWRTPSPATYLASASEKEEARMASPMDSLVATIFLRMARN------CTVS 191 S + T STT+ T SP+T +S + + ASP+ S + ++ L+ + +V Sbjct: 276 SSSNTTPTSTTFTTTSPSTAPSSTTVTYTSTTASPITSTITSVNLQTSLKYSVITVTSVH 335 Query: 190 ASDFFLSSACPRVAPIRRAFTTPSIVTVGTT 98 D +S R +++ T T+G T Sbjct: 336 TMDTNISEITSRYLTMKKVITQIYSSTLGAT 366
>GLYA_NATPD (Q3IRX5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 424 Score = 30.8 bits (68), Expect = 2.1 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Frame = +3 Query: 186 DALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGVRHVVLQSVRSA----SL 353 +AL +F ++++ E++GE ++ FSL V+G H+VL +R + S Sbjct: 274 EALQPEFEQYAQQVIDNAEALGERLQEHGFSL-----VSGGTDNHLVLVDLRESHPDTSG 328 Query: 354 RVRSHQENVAGVKLPKFTHFVDPAGASSPS 443 V AG+ L K T + A +PS Sbjct: 329 TVAEEALEAAGIVLNKNTVPGETRSAFNPS 358
>SHH_CHICK (Q91035) Sonic hedgehog protein precursor (SHH) [Contains: Sonic| hedgehog protein N-product; Sonic hedgehog protein C-product] Length = 425 Score = 30.4 bits (67), Expect = 2.8 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +3 Query: 231 ATKESMGEAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLR 356 AT + G+A+ AS+ + YV G+G + ++ SV S SLR Sbjct: 286 ATGSTSGQALFASNVKPGQRVYVLGEGGQQLLPASVHSVSLR 327
>SYE1_BRUME (Q8YHG4) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA| ligase 1) (GluRS 1) Length = 473 Score = 30.4 bits (67), Expect = 2.8 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +3 Query: 135 ARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGV 314 A+ I A+R AL +K + L + RA+LK + E+MGE A S A + +G+ Sbjct: 372 AKFIFASRPLALDEKAASLLNDEGRAVLKPVYPVLEAMGE-WTAESLDAAIRAHAEAEGL 430 Query: 315 R-HVVLQSVRSA 347 + + Q +R+A Sbjct: 431 KLGKIAQPLRAA 442
>Y6389_RHOBA (Q7UQD2) UPF0365 protein RB6389| Length = 362 Score = 29.3 bits (64), Expect = 6.2 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 15/108 (13%) Frame = +3 Query: 198 VQFRAILK-KIVATKESMGEAMRASSFSLAEAKYVAGDGVRHVV-----LQSVRSASLRV 359 V RAI++ KI+AT+ + + + EA Y+AG V+ V+ + ++ SL Sbjct: 74 VNTRAIVRSKIMATQAGLDDP--ELTVGALEAHYLAGGNVQQVIRALIAAKKAKTISLTF 131 Query: 360 R-------SHQENVAGVKLPKFTHFVD--PAGASSPSLTGLARGGQQV 476 R + ++ + V+ + +D P G++ PSL +A+ G Q+ Sbjct: 132 REATAIDLAGRDVLESVQTSVYPKVIDCPPRGSAKPSLDAVAKDGIQL 179
>ATPX_RHORU (P15015) ATP synthase B' chain (EC 3.6.3.14) (Subunit II)| Length = 161 Score = 29.3 bits (64), Expect = 6.2 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Frame = +3 Query: 216 LKKIVATKESMGEAMRASSFSLAEAKYVAGDGVRHVVLQSVRSA-----------SLRVR 362 LK+ A K A+ A +LAEA+ A D +R V + ++A + R++ Sbjct: 50 LKQAEALKAETEAAIAAYETALAEARARAHDEIRAVTEAAAKAAEARNAEVAKALNTRIK 109 Query: 363 SHQENVAGVKLPKFTHFVDPAGASSPSLTGLARG 464 + + + TH + AGA + + G G Sbjct: 110 DGEARIVQARDEALTHVREVAGAVASDIVGKLAG 143
>LRC45_MOUSE (Q8CIM1) Leucine-rich repeat-containing protein 45| Length = 670 Score = 28.9 bits (63), Expect = 8.1 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 138 RLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGVR 317 ++IG+ ALL ++S+ +++ + LK+ ++ EA RAS A YV G +R Sbjct: 605 KVIGSEHREALLDRESENASLREKLRLKEAEISRIRDEEAQRASFLQNAVLAYVQGSPLR 664
>SYE1_BRUSU (Q8G0E8) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA| ligase 1) (GluRS 1) Length = 473 Score = 28.9 bits (63), Expect = 8.1 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +3 Query: 135 ARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGV 314 A+ I A+R AL +K + L + RA+LK + E++GE A S A + +G+ Sbjct: 372 AKFIFASRPLALDEKAASLLNDEGRAVLKPVYPVLEAVGE-WTAESLDAAIRAHAEAEGL 430 Query: 315 R-HVVLQSVRSA 347 + + Q +R+A Sbjct: 431 KLGKIAQPLRAA 442 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,759,756 Number of Sequences: 219361 Number of extensions: 549659 Number of successful extensions: 2550 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2522 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
