Clone Information

BLAST Search Result

Clone Name	bart36d02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|AL731607.3\|OSJN00250 Oryza sativa genomic DNA, chromosome 4,...	515	e-143
2	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	515	e-143
3	dbj\|AK067501.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	515	e-143
4	emb\|AL732332.3\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	515	e-143
5	emb\|AL606454.3\|OSJN00009 Oryza sativa genomic DNA, chromosome 4,...	515	e-143
6	ref\|XM_474080.1\| Oryza sativa (japonica cultivar-group), predic...	513	e-142
7	dbj\|AK106989.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	507	e-140
8	gb\|AY104098.1\| Zea mays PCO119647 mRNA sequence	387	e-104
9	gb\|AY105877.1\| Zea mays PCO119646 mRNA sequence	68	3e-08
10	gb\|CP000353.1\| Ralstonia metallidurans CH34 megaplasmid, complet...	48	0.028
11	gb\|AE000513.1\| Deinococcus radiodurans R1 chromosome 1, complete...	48	0.028
12	emb\|AL646052.1\| Ralstonia solanacearum GMI1000 chromosome comple...	46	0.11
13	ref\|XM_476599.1\| Oryza sativa (japonica cultivar-group), mRNA	44	0.44
14	emb\|BX640452.1\| Bordetella bronchiseptica strain RB50, complete ...	44	0.44
15	emb\|BX640436.1\| Bordetella parapertussis strain 12822, complete ...	44	0.44
16	emb\|BX640411.1\| Bordetella pertussis strain Tohama I, complete g...	44	0.44
17	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.44
18	dbj\|AP006618.1\| Nocardia farcinica IFM 10152 DNA, complete genome	44	0.44
19	dbj\|AK065452.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.44
20	dbj\|AP003829.2\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.44
21	ref\|NM_192555.1\| Oryza sativa (japonica cultivar-group), predic...	42	1.7
22	ref\|XM_515296.1\| PREDICTED: Pan troglodytes TGFB inducible early...	42	1.7
23	gb\|CP000271.1\| Burkholderia xenovorans LB400 chromosome 2, compl...	42	1.7
24	emb\|BX640445.1\| Bordetella bronchiseptica strain RB50, complete ...	42	1.7
25	emb\|BX640431.1\| Bordetella parapertussis strain 12822, complete ...	42	1.7
26	emb\|BX572597.1\| Rhodopseudomonas palustris CGA009 complete genom...	42	1.7
27	emb\|AL939128.1\|SCO939128 Streptomyces coelicolor A3(2) complete ...	42	1.7
28	emb\|AL591985.1\|RME591985 Sinorhizobium meliloti 1021 complete pSymB	42	1.7
29	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
30	gb\|AF178441.1\|AF178441 Sinorhizobium meliloti nutrient deprivati...	42	1.7
31	dbj\|AP003300.4\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
32	dbj\|AK107346.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.7
33	gb\|AE016958.1\| Mycobacterium avium subsp. paratuberculosis str. ...	42	1.7
34	gb\|CP000031.1\| Silicibacter pomeroyi DSS-3, complete genome	40	6.8
35	ref\|NM_186999.2\| Oryza sativa (japonica cultivar-group), mRNA	40	6.8
36	gb\|CP000143.1\| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl...	40	6.8
37	gb\|AC166817.3\| Mus musculus BAC clone RP24-530C16 from chromosom...	40	6.8
38	gb\|AC073162.9\| Homo sapiens chromosome 10 clone RP11-536J24, com...	40	6.8
39	ref\|XM_752079.1\| Ustilago maydis 521 hypothetical protein (UM010...	40	6.8
40	gb\|CP000090.1\| Ralstonia eutropha JMP134 chromosome 1, complete ...	40	6.8
41	gb\|CP000089.1\| Dechloromonas aromatica RCB, complete genome	40	6.8
42	emb\|AL662947.3\|OSJN00148 Oryza sativa genomic DNA, chromosome 4,...	40	6.8
43	emb\|AL662945.3\|OSJN00141 Oryza sativa genomic DNA, chromosome 4,...	40	6.8
44	dbj\|AK140355.1\| Mus musculus 4 days neonate male adipose cDNA, R...	40	6.8
45	gb\|CP000264.1\| Jannaschia sp. CCS1, complete genome	40	6.8
46	gb\|CP000249.1\| Frankia sp. CcI3, complete genome	40	6.8
47	emb\|AJ586111.1\| Natrinema sp. XA3-1 16S rRNA gene, 23S rRNA gene...	40	6.8
48	gb\|AE017285.1\| Desulfovibrio vulgaris subsp. vulgaris str. Hilde...	40	6.8
49	gb\|AE016820.2\| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	40	6.8
50	gb\|CP000250.1\| Rhodopseudomonas palustris HaA2, complete genome	40	6.8
51	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	6.8
52	dbj\|BA000045.2\| Gloeobacter violaceus PCC 7421 DNA, complete genome	40	6.8
53	dbj\|AP003803.5\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
54	dbj\|AK111482.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.8
55	dbj\|AK071269.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.8
56	emb\|CT573326.1\| Pseudomonas entomophila str. L48 chromosome,comp...	40	6.8
57	emb\|CR936257.1\| Natronomonas pharaonis DSM 2160 complete genome	40	6.8
58	gb\|AC131120.4\| Mus musculus BAC clone RP24-547N4 from 10, comple...	40	6.8

>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
              complete sequence
          Length = 150416

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                          
Query: 71     gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 130
              ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 126205 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 126264

                                                                          
Query: 131    gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 190
              |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 126265 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 126324

                                                                          
Query: 191    gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 250
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 126325 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 126384

                                                                          
Query: 251    cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 310
               ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 126385 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 126444

                                                                          
Query: 311    cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 370
              ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 126445 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 126504

                                                                      
Query: 371    ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
              ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 126505 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 126560



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                         
Query: 435    tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
              ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 126587 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 126645

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                            
Query: 71       gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 130
                ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 32766772 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 32766831

                                                                            
Query: 131      gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 190
                |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 32766832 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 32766891

                                                                            
Query: 191      gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 250
                ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 32766892 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 32766951

                                                                            
Query: 251      cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 310
                 ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 32766952 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 32767011

                                                                            
Query: 311      cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 370
                ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 32767012 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 32767071

                                                                        
Query: 371      ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
                ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 32767072 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 32767127



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                           
Query: 435      tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
                ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 32767154 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 32767212



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 476      ctccgcctgccgcgccgccc 495
                ||||||||||||||||||||
Sbjct: 20390558 ctccgcctgccgcgccgccc 20390539

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>dbj|AK067501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H12, full
           insert sequence
          Length = 1438

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                       
Query: 71  gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 130
           ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 226 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 285

                                                                       
Query: 131 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 190
           |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 286 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 345

                                                                       
Query: 191 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 250
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 346 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 405

                                                                       
Query: 251 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 310
            ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 406 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 465

                                                                       
Query: 311 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 370
           ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 466 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 525

                                                                   
Query: 371 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 526 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 581



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 435 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
           ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 608 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 666

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>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete
             sequence
          Length = 91539

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                         
Query: 71    gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 130
             ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 37018 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 37077

                                                                         
Query: 131   gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 190
             |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 37078 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 37137

                                                                         
Query: 191   gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 250
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 37138 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 37197

                                                                         
Query: 251   cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 310
              ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 37198 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 37257

                                                                         
Query: 311   cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 370
             ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 37258 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 37317

                                                                     
Query: 371   ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
             ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 37318 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 37373



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 435   tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
             ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 37400 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 37458

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>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05,
             complete sequence
          Length = 142556

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                         
Query: 71    gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 130
             ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 29062 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 29121

                                                                         
Query: 131   gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 190
             |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 29122 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 29181

                                                                         
Query: 191   gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 250
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 29182 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 29241

                                                                         
Query: 251   cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 310
              ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 29242 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 29301

                                                                         
Query: 311   cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 370
             ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 29302 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 29361

                                                                     
Query: 371   ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
             ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 29362 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 29417



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 435   tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
             ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 29444 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 29502

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>ref|XM_474080.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 810

 Score =  513 bits (259), Expect = e-142
 Identities = 331/355 (93%)
 Strand = Plus / Plus

                                                                       
Query: 72  atgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggtg 131
           |||||||||||||||||| | |||||||||||||||||||||||||||||||||||  ||
Sbjct: 1   atgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcatg 60

                                                                       
Query: 132 aaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgcg 191
           ||||| || ||  |||||||||| || || |||||||| |||||||||||||||||||||
Sbjct: 61  aaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgcg 120

                                                                       
Query: 192 ctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatgggc 251
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 121 ctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatgggg 180

                                                                       
Query: 252 gaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacggc 311
           ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 181 gaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacggc 240

                                                                       
Query: 312 gtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccaccag 371
           || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 gtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccaccag 300

                                                                  
Query: 372 gagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
           |||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 gagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 355



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 435 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
           ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 382 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 440

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>dbj|AK106989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A07, full
           insert sequence
          Length = 1144

 Score =  507 bits (256), Expect = e-140
 Identities = 331/356 (92%)
 Strand = Plus / Plus

                                                                       
Query: 71  gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 130
           ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 61  gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 120

                                                                       
Query: 131 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 190
           |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 121 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 180

                                                                       
Query: 191 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 250
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 240

                                                                       
Query: 251 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 310
            ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 241 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 300

                                                                       
Query: 311 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 370
           ||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 cgtccgccacgttgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 360

                                                                   
Query: 371 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 416



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 435 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
           ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 443 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 501

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>gb|AY104098.1| Zea mays PCO119647 mRNA sequence
          Length = 1235

 Score =  387 bits (195), Expect = e-104
 Identities = 297/331 (89%)
 Strand = Plus / Plus

                                                                       
Query: 96  aacgtggtgccgacggtgacgatgctcggggtggtgaaggcgcgcctgatcggcgccacg 155
           ||||| ||||||||||||||||||||||| ||  ||||||| || ||  ||||||| || 
Sbjct: 120 aacgtcgtgccgacggtgacgatgctcggcgtcatgaaggctcggctcgtcggcgcgacc 179

                                                                       
Query: 156 cgggggcacgcgctgctcaagaagaagtcggacgcgctcaccgtgcagttccgcgccatc 215
           || || ||||||||||| ||||||||||| |||||||| || || |||||||||||||||
Sbjct: 180 cgcggccacgcgctgctgaagaagaagtccgacgcgctgacggtccagttccgcgccatc 239

                                                                       
Query: 216 ctcaagaagatcgtcgccaccaaggagtccatgggcgaggccatgcgcgcctcctccttc 275
           |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||
Sbjct: 240 ctcaagaagatcgtcgccgccaaggagtcgatgggcgagacgatgcgcgcctcctccttc 299

                                                                       
Query: 276 tcgctcgccgaggccaagtacgtggccggcgacggcgtgcgccacgtcgtgctccagtcc 335
           || |||||||||||||||||||| || ||||||||||| ||||||||| | |||||||||
Sbjct: 300 tccctcgccgaggccaagtacgtcgctggcgacggcgtccgccacgtcatcctccagtcc 359

                                                                       
Query: 336 gtccgctccgcctcgctccgcgtccgctcccaccaggagaacgtcgccggggtcaagctg 395
           |||||| | || ||  |||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 360 gtccgcgcggcatccgtccgcgtccgctcccaccaggagaacgtggccggggtcaagctc 419

                                          
Query: 396 cccaagttcacccacttcgtcgaccccgccg 426
           |||||||||||||||||||||||||||||||
Sbjct: 420 cccaagttcacccacttcgtcgaccccgccg 450



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 435 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
           ||||| |||||||| ||||| || |||||||| ||||||||| ||||||||||| ||||
Sbjct: 477 tccccgagcctcacgggcctggcccgcggcgggcagcaggtcgccgcctgccgctccgc 535

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>gb|AY105877.1| Zea mays PCO119646 mRNA sequence
          Length = 964

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 381 gccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 426
           |||||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 12  gccggggtcaagctcccgaagttcactcacttcgtcgaccccgccg 57



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 441 agcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgc 493
           ||||| || |||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 90  agccttacgggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgc 142

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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 449     cggcctcgcgcgcggcggccagca 472
               ||||||||||||||||||||||||
Sbjct: 2457603 cggcctcgcgcgcggcggccagca 2457580

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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 448     ccggcctcgcgcgcggcggccagcaggt 475
               ||||||||| ||||||||||||||||||
Sbjct: 1142623 ccggcctcgtgcgcggcggccagcaggt 1142650

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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 449     cggcctcgcgcgcggcggccagc 471
               |||||||||||||||||||||||
Sbjct: 1348074 cggcctcgcgcgcggcggccagc 1348052



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     cgccatcctcaagaagatcg 228
               ||||||||||||||||||||
Sbjct: 3175222 cgccatcctcaagaagatcg 3175203



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 97      acgtggtgccgacggtgacgatgc 120
               ||||||||||||||| ||||||||
Sbjct: 2918585 acgtggtgccgacggcgacgatgc 2918562

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>ref|XM_476599.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3268

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 470 gcaggtctccgcctgccgcgccgccc 495
           ||||||||||||||||| ||||||||
Sbjct: 299 gcaggtctccgcctgcctcgccgccc 324

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>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16
          Length = 123385

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 458  gcgcggcggccagcaggtctccgcct 483
            ||||||||||||||||||| ||||||
Sbjct: 7611 gcgcggcggccagcaggtcgccgcct 7586

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>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 458    gcgcggcggccagcaggtctccgcct 483
              ||||||||||||||||||| ||||||
Sbjct: 143439 gcgcggcggccagcaggtcgccgcct 143414

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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 458    gcgcggcggccagcaggtctccgcct 483
              ||||||||||||||||||| ||||||
Sbjct: 169226 gcgcggcggccagcaggtcgccgcct 169201

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 470     gcaggtctccgcctgccgcgccgccc 495
               ||||||||||||||||| ||||||||
Sbjct: 2123509 gcaggtctccgcctgcctcgccgccc 2123484



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 413      cgtcgaccccgccggcgcctcctccccc 440
                ||||||| ||||||||||| ||||||||
Sbjct: 23693746 cgtcgacgccgccggcgccccctccccc 23693719

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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 448     ccggcctcgcgcgcggcggccagcag 473
               ||||||||| ||||||||||||||||
Sbjct: 2546274 ccggcctcgtgcgcggcggccagcag 2546249

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>dbj|AK065452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025M19, full
           insert sequence
          Length = 3635

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 470 gcaggtctccgcctgccgcgccgccc 495
           ||||||||||||||||| ||||||||
Sbjct: 298 gcaggtctccgcctgcctcgccgccc 323

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>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1417_E01
          Length = 118058

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 470   gcaggtctccgcctgccgcgccgccc 495
             ||||||||||||||||| ||||||||
Sbjct: 79302 gcaggtctccgcctgcctcgccgccc 79277

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>ref|NM_192555.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 936

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 282 gccgaggccaagtacgtggccggcgacggcgtg 314
           ||||||||||||||| | ||||||| |||||||
Sbjct: 652 gccgaggccaagtacctcgccggcgtcggcgtg 684

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>ref|XM_515296.1| PREDICTED: Pan troglodytes TGFB inducible early growth response 2
            (LOC459023), mRNA
          Length = 2377

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 421  ccgccggcgcctcctccccca 441
            |||||||||||||||||||||
Sbjct: 2286 ccgccggcgcctcctccccca 2266

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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 449     cggcctcgcgcgcggcggcca 469
               |||||||||||||||||||||
Sbjct: 2408509 cggcctcgcgcgcggcggcca 2408489



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 300     gccggcgacggcgtgcgccacgtcgtgc 327
               |||| |||||||||||||| ||||||||
Sbjct: 1473124 gccgccgacggcgtgcgccgcgtcgtgc 1473097

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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   tcgcgcgcggcggccagcagg 474
             |||||||||||||||||||||
Sbjct: 80992 tcgcgcgcggcggccagcagg 81012

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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 454    tcgcgcgcggcggccagcagg 474
              |||||||||||||||||||||
Sbjct: 199141 tcgcgcgcggcggccagcagg 199121

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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 449    cggcctcgcgcgcggcggccagcag 473
              ||||||||||||| |||||||||||
Sbjct: 226582 cggcctcgcgcgccgcggccagcag 226558

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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 364  cccaccaggagaacgtcgccg 384
            |||||||||||||||||||||
Sbjct: 6388 cccaccaggagaacgtcgccg 6408

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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 407    ccacttcgtcgaccccgccgg 427
              |||||||||||||||||||||
Sbjct: 234269 ccacttcgtcgaccccgccgg 234289

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 282      gccgaggccaagtacgtggccggcgacggcgtg 314
                ||||||||||||||| | ||||||| |||||||
Sbjct: 22911133 gccgaggccaagtacctcgccggcgtcggcgtg 22911101

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>gb|AF178441.1|AF178441 Sinorhizobium meliloti nutrient deprivation-responsive gene cluster,
            partial sequence
          Length = 4762

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 407  ccacttcgtcgaccccgccgg 427
            |||||||||||||||||||||
Sbjct: 3217 ccacttcgtcgaccccgccgg 3237

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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 282    gccgaggccaagtacgtggccggcgacggcgtg 314
              ||||||||||||||| | ||||||| |||||||
Sbjct: 114690 gccgaggccaagtacctcgccggcgtcggcgtg 114658

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>dbj|AK107346.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G10, full
           insert sequence
          Length = 1175

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 282 gccgaggccaagtacgtggccggcgacggcgtg 314
           ||||||||||||||| | ||||||| |||||||
Sbjct: 755 gccgaggccaagtacctcgccggcgtcggcgtg 787

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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 453     ctcgcgcgcggcggccagcag 473
               |||||||||||||||||||||
Sbjct: 3374992 ctcgcgcgcggcggccagcag 3375012

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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 448     ccggcctcgcgcgcggcggc 467
               ||||||||||||||||||||
Sbjct: 3700110 ccggcctcgcgcgcggcggc 3700091

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>ref|NM_186999.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1689

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 413 cgtcgaccccgccggcgcctcctccccc 440
           ||||||| ||||||||||| ||||||||
Sbjct: 350 cgtcgacgccgccggcgccccctccccc 323

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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    ctcgcgcgcggcggccagca 472
              ||||||||||||||||||||
Sbjct: 255731 ctcgcgcgcggcggccagca 255712

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>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete
             sequence
          Length = 155876

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   cggcgcctcctcccccagcc 444
             ||||||||||||||||||||
Sbjct: 80444 cggcgcctcctcccccagcc 80425

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>gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, complete sequence
          Length = 185754

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    cctcctcccccagcctcacc 449
              ||||||||||||||||||||
Sbjct: 117614 cctcctcccccagcctcacc 117633

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>ref|XM_752079.1| Ustilago maydis 521 hypothetical protein (UM01025.1) partial mRNA
          Length = 1845

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 250 gcgaggccatgcgcgcctcctccttctc 277
           ||||||||||||||||| ||| ||||||
Sbjct: 331 gcgaggccatgcgcgccgccttcttctc 304

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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     cgccatcctcaagaagatcg 228
               ||||||||||||||||||||
Sbjct: 3412949 cgccatcctcaagaagatcg 3412930

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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 212     catcctcaagaagatcgtcgccaccaag 239
               ||||||||| |||||| |||||||||||
Sbjct: 3724371 catcctcaacaagatcatcgccaccaag 3724344

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>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
              complete sequence
          Length = 143301

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    ctccgcctgccgcgccgccc 495
              ||||||||||||||||||||
Sbjct: 121191 ctccgcctgccgcgccgccc 121172

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>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13,
            complete sequence
          Length = 113960

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  ctccgcctgccgcgccgccc 495
            ||||||||||||||||||||
Sbjct: 3978 ctccgcctgccgcgccgccc 3959

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>dbj|AK140355.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430220N06 product:bromodomain
           adjacent to zinc finger domain, 2A, full insert sequence
          Length = 3741

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 cggcgcctcctcccccagcc 444
           ||||||||||||||||||||
Sbjct: 537 cggcgcctcctcccccagcc 518

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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 457     cgcgcggcggccagcaggtc 476
               ||||||||||||||||||||
Sbjct: 2871771 cgcgcggcggccagcaggtc 2871752

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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     tgctcggggtggtgaaggcg 137
               ||||||||||||||||||||
Sbjct: 2886570 tgctcggggtggtgaaggcg 2886551

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>emb|AJ586111.1| Natrinema sp. XA3-1 16S rRNA gene, 23S rRNA gene (partial), IGS and
           ITS1, strain XA3-1
          Length = 5887

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 gacggcgtgcgccacgtcgt 325
           ||||||||||||||||||||
Sbjct: 513 gacggcgtgcgccacgtcgt 494

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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    aagttcacccacttcgtcga 418
              ||||||||||||||||||||
Sbjct: 725882 aagttcacccacttcgtcga 725901

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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
               complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     ccccgccggcgcctcctccc 438
               ||||||||||||||||||||
Sbjct: 1094790 ccccgccggcgcctcctccc 1094809

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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 453     ctcgcgcgcggcggccagcaggtc 476
               ||||||||||| ||||||||||||
Sbjct: 4687881 ctcgcgcgcggtggccagcaggtc 4687904



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 300     gccggcgacggcgtgcgccacgtc 323
               |||||||||||| |||||||||||
Sbjct: 4213687 gccggcgacggcctgcgccacgtc 4213710

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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 211     ccatcctcaagaagatcgtc 230
               ||||||||||||||||||||
Sbjct: 6634093 ccatcctcaagaagatcgtc 6634112

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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 445     tcaccggcctcgcgcgcggc 464
               ||||||||||||||||||||
Sbjct: 2428017 tcaccggcctcgcgcgcggc 2427998

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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 413   cgtcgaccccgccggcgcctcctccccc 440
             ||||||| ||||||||||| ||||||||
Sbjct: 38360 cgtcgacgccgccggcgccccctccccc 38333

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>dbj|AK111482.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B08, full
           insert sequence
          Length = 1181

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 476 ctccgcctgccgcgccgccc 495
           ||||||||||||||||||||
Sbjct: 89  ctccgcctgccgcgccgccc 108

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>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full
           insert sequence
          Length = 1690

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 413 cgtcgaccccgccggcgcctcctccccc 440
           ||||||| ||||||||||| ||||||||
Sbjct: 351 cgtcgacgccgccggcgccccctccccc 324

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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     caagaagatcgtcgccacca 237
               ||||||||||||||||||||
Sbjct: 4781245 caagaagatcgtcgccacca 4781226

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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   acgtggccggcgacggcgtg 314
             ||||||||||||||||||||
Sbjct: 76870 acgtggccggcgacggcgtg 76889

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>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence
          Length = 228657

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    cggcgcctcctcccccagcc 444
              ||||||||||||||||||||
Sbjct: 212816 cggcgcctcctcccccagcc 212797


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,248,537
Number of Sequences: 3902068
Number of extensions: 3248537
Number of successful extensions: 84754
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81121
Number of HSP's gapped (non-prelim): 3633
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result