>OAPA_HAEIN (P44415) Opacity-associated protein oapA|
          Length = 431

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = +2

Query: 119 LLPTRNRRLFMAVYAIVFASTTLLLL--GSDVV---IQPLANEIQLDLMALDSADP 271
           +LP ++RRLFMA++ +V        L   SD V    Q  +NE+ +   +LD + P
Sbjct: 132 VLPAKHRRLFMAIFVLVILLIIFFALKPSSDTVESFTQSNSNEVPVQFQSLDQSQP 187

>MCM8_MOUSE (Q9CWV1) DNA replication licensing factor MCM8 (Minichromosome|
           maintenance 8)
          Length = 833

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 288 EKSGLPGSALSSAMRSSWISLARGWMTTSLPRRSSVVEA 172
           +K G    AL  AM    ISLA+  +  SLP R+S++ A
Sbjct: 514 DKMGNQHQALLEAMEQQSISLAKAGVVCSLPARTSIIAA 552

>MCM8_HUMAN (Q9UJA3) DNA replication licensing factor MCM8 (Minichromosome|
           maintenance 8)
          Length = 840

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 288 EKSGLPGSALSSAMRSSWISLARGWMTTSLPRRSSVVEA 172
           +K G    AL  AM    ISLA+  +  SLP R+S++ A
Sbjct: 521 DKMGNQHQALLEAMEQQSISLAKAGVVCSLPARTSIIAA 559

>POLG_BVDVC (Q96662) Genome polyprotein [Contains: N-terminal protease (EC|
            3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
            E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
            (gp33); Envelope glycoprotein E2 (gp55); p7;
            Nonstructural protein 2
          Length = 3907

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
 Frame = +2

Query: 32   TRHP*AIAMATKSAQSTGPSFFNFLKEGLLLPTRNRRLFMAVYAIVFASTTLLLLGSDVV 211
            T HP  I +A  S +   P  F  ++ G +  T     F+              LG DV 
Sbjct: 2191 TDHPEPIQLAYNSYEVQVPVLFPKIRNGEVTDTYENYSFLNARK----------LGEDVP 2240

Query: 212  IQPLANE---IQLDLMALDSADPGS 277
            +   A E   + +DL+ LD  DPG+
Sbjct: 2241 VYVYATEDEDLAVDLLGLDWPDPGN 2265

>FRU_DROME (Q8IN81) Sex determination protein fruitless|
          Length = 955

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = +1

Query: 1   HHRGHFQLASNSPSIGHSHGNQIGSKHGAFLLQLPKGR--------PPPPNAQP 138
           H  GH  L S++ + GH H +   S + A  LQ P  R        PPPP   P
Sbjct: 34  HPHGHGHLHSHAHAHGHGHAH---SHYAALDLQTPHKRNIETDVRAPPPPLPPP 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,631,848
Number of Sequences: 219361
Number of extensions: 734245
Number of successful extensions: 2276
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2273
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)