>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb|
           chitinase-1) (TBC-1)
          Length = 314

 Score =  160 bits (405), Expect = 2e-39
 Identities = 79/137 (57%), Positives = 100/137 (72%)
 Frame = +3

Query: 108 IAMTNGYLFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFS 287
           + +T+  +FREYIG+QF  V+FSDVP+N  V FH+ILAFAIDYT      +PTPTNG F 
Sbjct: 21  LPLTSALVFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYT---SGSSPTPTNGNFK 77

Query: 288 AFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSR 467
            FWDT +LS + VAA+K  H NV V + LGGDSV     V F+P+SV SWV NAV+SL+R
Sbjct: 78  PFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGG-KNVFFSPSSVSSWVENAVSSLTR 136

Query: 468 LINEYGLDGVDVDYERF 518
           +I +Y LDG+D+DYE F
Sbjct: 137 IIKQYHLDGIDIDYEHF 153

>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)|
          Length = 275

 Score =  155 bits (392), Expect = 6e-38
 Identities = 79/130 (60%), Positives = 97/130 (74%)
 Frame = +3

Query: 129 LFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTAS 308
           LFREYIGAQF  V+FSDVP+N  V FH+ILAFAIDYT      +PTPTNG F+ FWDT +
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYT---SGSSPTPTNGNFNPFWDTNN 58

Query: 309 LSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGL 488
           LS + VAAIK  + NV V V LGG+SV    +V F P+SV SWV NAV+SL+++I +Y L
Sbjct: 59  LSPSQVAAIKRTYNNVKVSVSLGGNSVGG-ERVFFNPSSVSSWVDNAVSSLTKIIKQYHL 117

Query: 489 DGVDVDYERF 518
           DG+D+DYE F
Sbjct: 118 DGIDIDYEHF 127

>RUAP_SOYBN (P39657) RuBisCO-associated protein|
          Length = 283

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
 Frame = +3

Query: 180 VPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHP--- 350
           +P N    F   L+ A DY           TNG F  +WDT  ++   +   K  +    
Sbjct: 22  IPENI-TEFQVTLSLARDYDG------NNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTA 74

Query: 351 -NVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYERFA 521
             V V+V +G  + Q    +    NS ++WV+ A ASL  +I  Y LDG+DV YE  A
Sbjct: 75  LRVKVLVSIGNKNKQFPFTIGSDSNS-EAWVSEATASLKSIIKTYNLDGIDVSYEDIA 131

>CHIX_STROI (Q05638) Exochitinase 1 precursor (EC 3.2.1.14)|
          Length = 597

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
 Frame = +3

Query: 78  LTPRPAPARSIAMTNGY------LFREYIGAQFTGVRFSDVPVNTGVSF-HYILAFAIDY 236
           LTP  A A  +A  NG              A  TG   +D+P +  V + H   A    Y
Sbjct: 221 LTPDTAYAFQVAAVNGAGESAKSATVTATTAPGTGGGSADLPPHALVGYLHASFANGSGY 280

Query: 237 TPVAQKPTPTPTNGAFSAFWDTASLSRADV--------------------AAIKAAHP-N 353
           T +A  P          AF +  S++  D+                    AAIKA     
Sbjct: 281 TRLADVPDSWDVIDL--AFGEPTSVTSGDIRFDRCPATECPNVESDAEFKAAIKAKQAAG 338

Query: 354 VSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYE 512
             V++ +GG + Q  +  + A ++        V+S+S++I+EYGLDG+D+D+E
Sbjct: 339 KKVLISIGGQNGQVQLTTTAARDTF-------VSSVSKIIDEYGLDGLDIDFE 384

>CHIB_SERMA (P11797) Chitinase B precursor (EC 3.2.1.14)|
          Length = 499

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
 Frame = +3

Query: 273 NGAFSAFWDTAS--LSRADVA----AIKAAHPNVSVMVGLGGDSVQDIVKVSFAP--NSV 428
           N      WD A+      DV     A+KA +P++ +M  +GG    + + VS A   N+V
Sbjct: 55  NSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAV 114

Query: 429 DSWVANA--VASLSRLINEYGLDGVDVDYE 512
            +  A      S  R++ +YG DGVD+D+E
Sbjct: 115 KTPAARTKFAQSCVRIMKDYGFDGVDIDWE 144

>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
            arginine/serine-rich 2-interacting protein)
            (SC35-interacting protein 1) (CTD-associated SR protein
            11) (Splicing regulatory protein 129) (SRrp129)
            (NY-REN-40 antigen)
          Length = 1148

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 16/125 (12%)
 Frame = +3

Query: 60   SGVPLI-----------LTPRPAPARSIAMTNGYLFREYIGAQFTGVRFSDVPVNTGVSF 206
            +GVPL+           L P P P       N      YI +Q  G +   +P ++ VS 
Sbjct: 944  TGVPLMQVATPTSVSQGLPPPPPPPPPSQQVN------YIASQPDGKQLQGIPSSSHVSN 997

Query: 207  HYILAFAIDYTPVAQKPTPTPTN-----GAFSAFWDTASLSRADVAAIKAAHPNVSVMVG 371
            +         TPV   PT  P N     G  S    ++S S+A  AA+K A   VSV V 
Sbjct: 998  NMS-------TPVLPAPTAAPGNTGMVQGPSSGNTSSSSHSKASNAAVKLAESKVSVAVE 1050

Query: 372  LGGDS 386
               DS
Sbjct: 1051 ASADS 1055

>CHIT3_DROME (Q9W5U2) Probable chitinase 3 (EC 3.2.1.14)|
          Length = 458

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
 Frame = +3

Query: 48  YQQQSGVPLILTPRPAPARSIA-MTNGYLFREYIGAQFTGVRFSDVPVNTGVSFHYILAF 224
           Y  +  VP    PR +  + I   TN   +R+ IG      RF+   +NT +  H I  F
Sbjct: 159 YPTEKPVP---KPRDSHYKVICYFTNWAWYRKGIG------RFTPDDINTELCTHVIYGF 209

Query: 225 AI-DYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQD-I 398
           A+ DY+ +  +           ++ D  +     V ++K+    VS+ +G   DS  D  
Sbjct: 210 AVLDYSELVLR--------THDSWADVENNFYTRVTSLKSKGIKVSLALGGWNDSQGDKY 261

Query: 399 VKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYE 512
            ++  +P +   +V +A+      I +YG +G+D+D+E
Sbjct: 262 SRLVRSPMARSRFVRHAL----EFIEKYGFEGLDLDWE 295

>CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14)|
          Length = 617

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 10/148 (6%)
 Frame = +3

Query: 99  ARSIAM---TNGYLFREYIG--AQFTGVRFSDVPVN--TGVSFHYILAFA---IDYTPVA 248
           +RS+A    TN Y+   Y    AQ+   R   VP +   G+  H + AF     DYT  A
Sbjct: 41  SRSVARSEPTNSYIRPCYFTNWAQYRQGRAKFVPEDYTPGLCTHILFAFGWMNADYTVRA 100

Query: 249 QKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSV 428
             P   P +      W    + R  V  +K     +  ++  GG S    +    A +S 
Sbjct: 101 YDPADLPND------WAGEGMYRR-VNKLKVTDTQLKTLLSFGGWSFGTALFQGMAASSA 153

Query: 429 DSWVANAVASLSRLINEYGLDGVDVDYE 512
              V   + S    +  +G DG+D+D+E
Sbjct: 154 SRKVF--IDSAITFVRTWGFDGIDIDWE 179

>RS15_YEAST (Q01855) 40S ribosomal protein S15 (S21) (YS21) (RP52) (RIG|
           protein)
          Length = 142

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +3

Query: 87  RPAPARSIAMTNGYLFREYIGAQ---FTGVRFSDVPVNTGVSFHYILAFAIDYTPV 245
           +PAP R+  M N  +  E IG+    + G  F+ V +   +  HY+  F+I YTPV
Sbjct: 72  KPAPVRT-HMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPV 126

>Y2598_MYCBO (P65010) Hypothetical protein Mb2598c|
          Length = 341

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -2

Query: 430 STELGAKETLTMSCTLSPPRPTMTLTFGCAALMAATSARDRLAVSQNALNAPLVG 266
           S +LG    L  SC L+  RP+ T T G A    A  A+ RL    + L  P+VG
Sbjct: 62  SDQLGG---LCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113

>Y2568_MYCTU (P65009) Hypothetical protein Rv2568c/MT2644|
          Length = 341

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -2

Query: 430 STELGAKETLTMSCTLSPPRPTMTLTFGCAALMAATSARDRLAVSQNALNAPLVG 266
           S +LG    L  SC L+  RP+ T T G A    A  A+ RL    + L  P+VG
Sbjct: 62  SDQLGG---LCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113

>CH47_DROME (Q23997) Chitinase-like protein DS47 precursor|
          Length = 452

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
 Frame = +3

Query: 324 VAAIKAAHPNVSVMVGLGGDSVQDIVK-VSFAPNSVDSWVANA------VASLSRLINEY 482
           V  +K  +PNV +++ +GGD   ++ K     PN     + +       V ++  L+  Y
Sbjct: 96  VTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTY 155

Query: 483 GLDGVDVDYE 512
           G DG+DV ++
Sbjct: 156 GFDGLDVAWQ 165

>CHIT2_DROME (Q9W092) Probable chitinase 2 precursor (EC 3.2.1.14)|
          Length = 484

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = +3

Query: 324 VAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDV 503
           +  +K +HP++ V + +GG +       +   N++       V  +S  I +Y  DG+D+
Sbjct: 108 MTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLR--GRFVKQVSSFIRKYNFDGLDL 165

Query: 504 DYE 512
           D+E
Sbjct: 166 DWE 168

>IDGF2_DROME (Q9V3D4) Chitinase-like protein Idgf2 precursor (Imaginal disk|
           growth factor protein 2)
          Length = 440

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
 Frame = +3

Query: 318 ADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWV----------ANAVASLSR 467
           ++V ++K  +P++ V++ +GGD   D       P+  + ++             + S   
Sbjct: 85  SEVTSLKRKYPHLKVLLSVGGDHDID-------PDHPNKYIDLLEGEKVRQIGFIRSAYD 137

Query: 468 LINEYGLDGVDVDYE 512
           L+  YG DG+D+ Y+
Sbjct: 138 LVKTYGFDGLDLAYQ 152

>ILVC_TREPR (Q8KTR6) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 328

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +3

Query: 33  RSHCIYQQQSGVPLILTPRPAPARSIAMTNGYLFR 137
           R+H +  + SGV +++  RP P+   AM++G++ R
Sbjct: 29  RAHAMNLRDSGVEVVIGLRPGPSFDAAMSDGFMPR 63

>RAI1_HUMAN (Q7Z5J4) Retinoic acid-induced protein 1|
          Length = 1906

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +3

Query: 240 PVAQKPTPTPTNGAFSAFWDTASLSRADVA 329
           P    P P PT  AF  F DT + S AD A
Sbjct: 712 PTLGVPAPDPTTAAFDCFPDTTAASSADSA 741

>MTRC_METKA (O32865) Tetrahydromethanopterin S-methyltransferase subunit C (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit C)
          Length = 270

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +3

Query: 294 WDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASL 461
           W   ++ R     +    P++  M GLGG SV  I+  + + N+V +W A  + ++
Sbjct: 63  WGADAVRRVAGYGLGTGVPSIGFM-GLGGGSVAAILAAALSGNTVPAWAAAIIGTV 117

>CHIT1_HUMAN (Q13231) Chitotriosidase-1 precursor (EC 3.2.1.14) (Chitinase-1)|
          Length = 466

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +3

Query: 294 WDTASLSRADVAAIKAAHPNVSVMVGLGGDS--VQDIVKVSFAPNSVDSWVANAVASLSR 467
           W+  +L + +   +K  +P +  ++ +GG +   Q    +    N+  ++V +A+    R
Sbjct: 71  WNDETLYQ-EFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAI----R 125

Query: 468 LINEYGLDGVDVDYE 512
            + +Y  DG+D+D+E
Sbjct: 126 FLRKYSFDGLDLDWE 140

>RS15_ELAOL (Q945U1) 40S ribosomal protein S15|
          Length = 153

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 87  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 245
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 80  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 134

>RS15_PICMA (O65059) 40S ribosomal protein S15|
          Length = 151

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 87  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 245
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 78  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 132

>CHIA1_BACCI (P20533) Chitinase A1 precursor (EC 3.2.1.14)|
          Length = 699

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +3

Query: 333 IKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYE 512
           +K  +PN+  ++ +GG +  +      A  +     AN+     R   +Y  DGVD+D+E
Sbjct: 148 LKQTNPNLKTIISVGGWTWSNRFSDVAATAATREVFANSAVDFLR---KYNFDGVDLDWE 204

Query: 513 RFATG 527
              +G
Sbjct: 205 YPVSG 209

>RS15D_ARATH (Q9FY64) 40S ribosomal protein S15-4|
          Length = 152

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 87  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 245
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 79  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 133

>RS151_ARATH (Q08112) 40S ribosomal protein S15-1|
          Length = 152

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 87  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 245
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 79  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 133

>CHIT_MANSE (P36362) Endochitinase precursor (EC 3.2.1.14)|
          Length = 554

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = +3

Query: 330 AIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDY 509
           +++++HP+V  MV +GG   +   K S    +  S   + + S+   + +Y  DG+D+D+
Sbjct: 88  SLRSSHPSVKFMVAVGG-WAEGSSKYSHMV-AQKSTRMSFIRSVVSFLKKYDFDGLDLDW 145

Query: 510 E 512
           E
Sbjct: 146 E 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,177,422
Number of Sequences: 219361
Number of extensions: 910005
Number of successful extensions: 3475
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3467
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)