ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart36c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465806.1| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
3dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
4dbj|AK059542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
5gb|AY107325.1| Zea mays PCO061228 mRNA sequence 194 2e-46
6gb|BT016608.1| Zea mays clone Contig441 mRNA sequence 186 5e-44
7ref|XM_464010.1| Oryza sativa (japonica cultivar-group), mRNA 161 3e-36
8dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
9gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
12gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.45
13emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in ... 42 1.8
14emb|AJ851451.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.8
15ref|NM_001012700.1| Gallus gallus La ribonucleoprotein domain fa... 42 1.8
16emb|BX932319.1| Gallus gallus finished cDNA, clone ChEST356c5 42 1.8
17gb|AY008651.1| Sophronitis kautskyi isolate C286 internal transc... 42 1.8
18gb|AF260199.1| Sophronitis harpophylla internal transcribed spac... 42 1.8
19ref|NM_100288.2| Arabidopsis thaliana TOM22-I AT1G04070 (TOM22-I... 40 7.0
20gb|AY365046.1| Pan troglodytes BRCA1 (BRCA1) gene, complete cds 40 7.0
21ref|XM_481727.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
22ref|XM_472434.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
23gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.0
24gb|L78833.1| Homo sapiens BRCA1 (BRCA1) gene, complete cds; ribo... 40 7.0
25ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
26gb|BT025570.1| Arabidopsis thaliana At1g04070 mRNA, complete cds 40 7.0
27gb|DQ478408.1| Homo sapiens neighbor of BRCA1 gene 1 (NBR1) gene... 40 7.0
28gb|DQ190457.1| Homo sapiens clone mck41_A neighbor of BRCA1 gene... 40 7.0
29gb|DQ190456.1| Homo sapiens clone mck578_U neighbor of BRCA1 gen... 40 7.0
30gb|DQ190455.1| Homo sapiens clone mck554_A neighbor of BRCA1 gen... 40 7.0
31gb|DQ190454.1| Homo sapiens clone mck43_A neighbor of BRCA1 gene... 40 7.0
32gb|DQ190453.1| Homo sapiens clone mck55_A neighbor of BRCA1 gene... 40 7.0
33gb|DQ190452.1| Homo sapiens clone mck94_A neighbor of BRCA1 gene... 40 7.0
34gb|DQ190451.1| Homo sapiens clone mck47_A neighbor of BRCA1 gene... 40 7.0
35gb|DQ190450.1| Homo sapiens clone mck432_A neighbor of BRCA1 gen... 40 7.0
36ref|XM_755061.1| Ustilago maydis 521 hypothetical protein (UM040... 40 7.0
37gb|AC126044.4| Mus musculus BAC clone RP23-12O8 from chromosome ... 40 7.0
38gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, comple... 40 7.0
39gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 7.0
40emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.0
41emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 7.0
42emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
43emb|AL672114.1|MLO672114 Mesorhizobium loti R7A symbiosis island... 40 7.0
44emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
45gb|AF533655.1| Geobacillus stearothermophilus aminopeptidase-lik... 40 7.0
46gb|AY124010.1| Homo sapiens interleukin 1 receptor, type II (IL1... 40 7.0
47emb|CR615217.1| full-length cDNA clone CS0DL012YD14 of B cells (... 40 7.0
48dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.0
49gb|AC097534.3| Homo sapiens BAC clone RP11-798M19 from 4, comple... 40 7.0
50gb|AE002160.2| Chlamydia muridarum Nigg, complete genome 40 7.0
51gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer... 40 7.0
52gb|DQ361836.1| Shigella boydii strain G1226 GalK (galK) gene, co... 40 7.0
53gb|AY273801.1| Homo sapiens breast cancer 1, early onset (BRCA1)... 40 7.0
54gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.0
55gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell ... 40 7.0
56dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
57dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
58dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
59emb|BX818699.1|CNS0AEFA Arabidopsis thaliana Full-length cDNA Co... 40 7.0
60emb|BX818651.1|CNS0ACO6 Arabidopsis thaliana Full-length cDNA Co... 40 7.0
61emb|BX818437.1|CNS0ACQ7 Arabidopsis thaliana Full-length cDNA Co... 40 7.0
62gb|AC007165.4| Homo sapiens BAC clone RP11-451C2 from 2, complet... 40 7.0
63gb|AC023108.4| Homo sapiens BAC clone RP11-121I13 from 2, comple... 40 7.0
64gb|AY086260.1| Arabidopsis thaliana clone 23106 mRNA, complete s... 40 7.0
65ref|XM_235023.3| PREDICTED: Rattus norvegicus similar to down-re... 40 7.0
66gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.0
67gb|AC135721.4| Homo sapiens, clone CTD-3199J23, complete sequence 40 7.0
68dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.0
69dbj|AK175541.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.0
70gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Canc... 40 7.0
71dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
72dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
73dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
74dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
75emb|AJ333270.1|HSA333270 Homo sapiens genomic sequence surroundi... 40 7.0
76ref|NM_211069.1| Eremothecium gossypii AFR168Wp (AFR168W), mRNA 40 7.0
77dbj|AK071948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
78gb|AC134787.6| Mus musculus chromosome 1, clone RP24-477E13, com... 40 7.0
79emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on ch... 40 7.0
80emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on ... 40 7.0
81emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on ch... 40 7.0
82gb|AC002411.1|F20D22 Arabidopsis thaliana chromosome 1 BAC F20D2... 40 7.0
83gb|U48401.1|RNU48401 Rattus norvegicus TGF-beta type I receptor ... 40 7.0
84dbj|AB215778.1| Equus caballus DNA, microsatellite TKY1835 40 7.0
85emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on ch... 40 7.0
86gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
87gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
88gb|M30948.1|GORRGIT Gorilla rRNA gene internal transcribed space... 40 7.0
89gb|AC003027.1| Arabidopsis thaliana chromosome I BAC F21M11 geno... 40 7.0 
>ref|XM_465806.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 589

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Plus

                                                                       
Query: 120 tctcgcggtcttcggtggcggcgcacggccgcgaggccgcggcggtggcggggaagctgc 179
           |||| |||||||||||||||||||| || |||||||| ||| |  |||||  ||||||||
Sbjct: 106 tctcccggtcttcggtggcggcgcatgggcgcgaggcggcgaccatggcgaagaagctgc 165

                                                                       
Query: 180 tgcggagtacggggaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgc 239
           ||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||| |
Sbjct: 166 tgcggagcacggggaaggcggcctggatcgcggggaccaccttcctcgtcctcgtcgtcc 225

                                                                       
Query: 240 cgctcatcatcgagatggaccgcgagcagcagatggtcgacctcgacctccagcagcagg 299
           |||||||||||||||||||||||||||||||| |   ||||||||| |||||||||||||
Sbjct: 226 cgctcatcatcgagatggaccgcgagcagcagctcaacgacctcgagctccagcagcagg 285

            
Query: 300 c 300
           |
Sbjct: 286 c 286
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Plus

                                                                            
Query: 120      tctcgcggtcttcggtggcggcgcacggccgcgaggccgcggcggtggcggggaagctgc 179
                |||| |||||||||||||||||||| || |||||||| ||| |  |||||  ||||||||
Sbjct: 17563914 tctcccggtcttcggtggcggcgcatgggcgcgaggcggcgaccatggcgaagaagctgc 17563973

                                                                            
Query: 180      tgcggagtacggggaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgc 239
                ||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||| |
Sbjct: 17563974 tgcggagcacggggaaggcggcctggatcgcggggaccaccttcctcgtcctcgtcgtcc 17564033

                                                                            
Query: 240      cgctcatcatcgagatggaccgcgagcagcagatggtcgacctcgacctccagcagcagg 299
                |||||||||||||||||||||||||||||||| |   ||||||||| |||||||||||||
Sbjct: 17564034 cgctcatcatcgagatggaccgcgagcagcagctcaacgacctcgagctccagcagcagg 17564093

                 
Query: 300      c 300
                |
Sbjct: 17564094 c 17564094



 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                           
Query: 180     tgcggagtacggggaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgc 239
               ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 1650924 tgcggagcacggggaaggcggcgtggatcgcggggaccaccttcctggtcctcgtcgtcc 1650983

                                                                           
Query: 240     cgctcatcatcgagatggaccgcgagcagcagatggtcgacctcgacctccagcagcagg 299
               ||||||||||||||||||| |||||||||||| |   |||||| || |||||||||||||
Sbjct: 1650984 cgctcatcatcgagatggatcgcgagcagcagctcaacgaccttgagctccagcagcagg 1651043

                
Query: 300     c 300
               |
Sbjct: 1651044 c 1651044



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 90       gcggcgacgcgggcggcgtcctgg 113
                ||||||||| ||||||||||||||
Sbjct: 11361321 gcggcgacgagggcggcgtcctgg 11361298
to top
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_D09
          Length = 124026

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Plus

                                                                         
Query: 120   tctcgcggtcttcggtggcggcgcacggccgcgaggccgcggcggtggcggggaagctgc 179
             |||| |||||||||||||||||||| || |||||||| ||| |  |||||  ||||||||
Sbjct: 33832 tctcccggtcttcggtggcggcgcatgggcgcgaggcggcgaccatggcgaagaagctgc 33891

                                                                         
Query: 180   tgcggagtacggggaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgc 239
             ||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||| |
Sbjct: 33892 tgcggagcacggggaaggcggcctggatcgcggggaccaccttcctcgtcctcgtcgtcc 33951

                                                                         
Query: 240   cgctcatcatcgagatggaccgcgagcagcagatggtcgacctcgacctccagcagcagg 299
             |||||||||||||||||||||||||||||||| |   ||||||||| |||||||||||||
Sbjct: 33952 cgctcatcatcgagatggaccgcgagcagcagctcaacgacctcgagctccagcagcagg 34011

              
Query: 300   c 300
             |
Sbjct: 34012 c 34012
to top
>dbj|AK059542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E12, full
           insert sequence
          Length = 589

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Plus

                                                                       
Query: 120 tctcgcggtcttcggtggcggcgcacggccgcgaggccgcggcggtggcggggaagctgc 179
           |||| |||||||||||||||||||| || |||||||| ||| |  |||||  ||||||||
Sbjct: 106 tctcccggtcttcggtggcggcgcatgggcgcgaggcggcgaccatggcgaagaagctgc 165

                                                                       
Query: 180 tgcggagtacggggaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgc 239
           ||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||| |
Sbjct: 166 tgcggagcacggggaaggcggcctggatcgcggggaccaccttcctcgtcctcgtcgtcc 225

                                                                       
Query: 240 cgctcatcatcgagatggaccgcgagcagcagatggtcgacctcgacctccagcagcagg 299
           |||||||||||||||||||||||||||||||| |   ||||||||| |||||||||||||
Sbjct: 226 cgctcatcatcgagatggaccgcgagcagcagctcaacgacctcgagctccagcagcagg 285

            
Query: 300 c 300
           |
Sbjct: 286 c 286
to top
>gb|AY107325.1| Zea mays PCO061228 mRNA sequence
          Length = 844

 Score =  194 bits (98), Expect = 2e-46
 Identities = 158/178 (88%)
 Strand = Plus / Plus

                                                                       
Query: 133 ggtggcggcgcacggccgcgaggccgcggcggtggcggggaagctgctgcggagtacggg 192
           ||||||||||||||| || ||||| ||||| ||||||  ||||||||||||||| |||||
Sbjct: 169 ggtggcggcgcacgggcgagaggcggcggccgtggcgaagaagctgctgcggagcacggg 228

                                                                       
Query: 193 gaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgccgctcatcatcga 252
           |||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 229 gaaggcggcgtggatcgcggggacaaccttcctggtgctggtggtgccgctgatcatcga 288

                                                                     
Query: 253 gatggaccgcgagcagcagatggtcgacctcgacctccagcagcaggctcttctgggc 310
           ||||||||| ||||||||| |   ||||||||| || ||||||||| | |||||||||
Sbjct: 289 gatggaccgggagcagcagctcaacgacctcgagctgcagcagcagacgcttctgggc 346
to top
>gb|BT016608.1| Zea mays clone Contig441 mRNA sequence
          Length = 729

 Score =  186 bits (94), Expect = 5e-44
 Identities = 157/178 (88%)
 Strand = Plus / Plus

                                                                       
Query: 133 ggtggcggcgcacggccgcgaggccgcggcggtggcggggaagctgctgcggagtacggg 192
           ||||||||||||||| || ||||| ||||| ||||||  ||||||||||||||| |||||
Sbjct: 83  ggtggcggcgcacgggcgagaggcggcggccgtggcgaagaagctgctgcggagcacggg 142

                                                                       
Query: 193 gaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgccgctcatcatcga 252
           |||||||||||||||||||||||| |||||||||||||| || | |||||| ||||||||
Sbjct: 143 gaaggcggcgtggatcgcggggacaaccttcctggtgctggtggggccgctgatcatcga 202

                                                                     
Query: 253 gatggaccgcgagcagcagatggtcgacctcgacctccagcagcaggctcttctgggc 310
           ||||||||| ||||||||| |   ||||||||| || ||||||||| | |||||||||
Sbjct: 203 gatggaccgggagcagcagctcaacgacctcgagctgcagcagcagacgcttctgggc 260
to top
>ref|XM_464010.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 258

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                       
Query: 180 tgcggagtacggggaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgc 239
           ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 110 tgcggagcacggggaaggcggcgtggatcgcggggaccaccttcctggtcctcgtcgtcc 169

                                                                       
Query: 240 cgctcatcatcgagatggaccgcgagcagcagatggtcgacctcgacctccagcagcagg 299
           ||||||||||||||||||| |||||||||||| |   |||||| || |||||||||||||
Sbjct: 170 cgctcatcatcgagatggatcgcgagcagcagctcaacgaccttgagctccagcagcagg 229

            
Query: 300 c 300
           |
Sbjct: 230 c 230
to top
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1007_D04
          Length = 125503

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                         
Query: 180   tgcggagtacggggaaggcggcgtggatcgcggggaccaccttcctggtgctcgtcgtgc 239
             ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 88027 tgcggagcacggggaaggcggcgtggatcgcggggaccaccttcctggtcctcgtcgtcc 88086

                                                                         
Query: 240   cgctcatcatcgagatggaccgcgagcagcagatggtcgacctcgacctccagcagcagg 299
             ||||||||||||||||||| |||||||||||| |   |||||| || |||||||||||||
Sbjct: 88087 cgctcatcatcgagatggatcgcgagcagcagctcaacgaccttgagctccagcagcagg 88146

              
Query: 300   c 300
             |
Sbjct: 88147 c 88147
to top
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20,
              complete sequence
          Length = 130827

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 162    cggtggcggggaagctgctgcggagtacggggaaggcggcgtgg 205
              ||||||||||||||  ||||||||  ||||||||||||||||||
Sbjct: 109502 cggtggcggggaaggcgctgcggatcacggggaaggcggcgtgg 109459
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 162     cggtggcggggaagctgctgcggagtacggggaaggcggcgtgg 205
               ||||||||||||||  ||||||||  ||||||||||||||||||
Sbjct: 7253667 cggtggcggggaaggcgctgcggatcacggggaaggcggcgtgg 7253710
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 162     cggtggcggggaagctgctgcggagtacggggaaggcggcgtgg 205
               ||||||||||||||  ||||||||  ||||||||||||||||||
Sbjct: 7323753 cggtggcggggaaggcgctgcggatcacggggaaggcggcgtgg 7323796
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 86      aagcgcggcgacgcgggcggcg 107
               ||||||||||||||||||||||
Sbjct: 2861822 aagcgcggcgacgcgggcggcg 2861843
to top
>emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in linkage group 5, complete
              sequence
          Length = 190731

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     atcaatcccttccatccagtc 38
              |||||||||||||||||||||
Sbjct: 169985 atcaatcccttccatccagtc 169965
to top
>emb|AJ851451.1| Gallus gallus mRNA for hypothetical protein, clone 3f2
          Length = 6891

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 cggggaaggcggcgtggatcgcggg 213
           |||||| ||||||||||||||||||
Sbjct: 85  cggggagggcggcgtggatcgcggg 109
to top
>ref|NM_001012700.1| Gallus gallus La ribonucleoprotein domain family, member 4 (LARP4),
           mRNA
          Length = 6891

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 cggggaaggcggcgtggatcgcggg 213
           |||||| ||||||||||||||||||
Sbjct: 85  cggggagggcggcgtggatcgcggg 109
to top
>emb|BX932319.1| Gallus gallus finished cDNA, clone ChEST356c5
          Length = 770

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 cggggaaggcggcgtggatcgcggg 213
           |||||| ||||||||||||||||||
Sbjct: 41  cggggagggcggcgtggatcgcggg 65
to top
>gb|AY008651.1| Sophronitis kautskyi isolate C286 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 635

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 431 cggagagaaagatcatgcctt 451
           |||||||||||||||||||||
Sbjct: 567 cggagagaaagatcatgcctt 587
to top
>gb|AF260199.1| Sophronitis harpophylla internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 635

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 431 cggagagaaagatcatgcctt 451
           |||||||||||||||||||||
Sbjct: 567 cggagagaaagatcatgcctt 587
to top
>ref|NM_100288.2| Arabidopsis thaliana TOM22-I AT1G04070 (TOM22-I) mRNA, complete cds
          Length = 634

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gggaaggcggcgtggatcgc 210
           ||||||||||||||||||||
Sbjct: 209 gggaaggcggcgtggatcgc 228
to top
>gb|AY365046.1| Pan troglodytes BRCA1 (BRCA1) gene, complete cds
          Length = 80966

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   ttcacatttcattttgcctg 380
             ||||||||||||||||||||
Sbjct: 64248 ttcacatttcattttgcctg 64229
to top
>ref|XM_481727.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  ggtggcggcgcacggccgcg 152
            ||||||||||||||||||||
Sbjct: 1088 ggtggcggcgcacggccgcg 1107
to top
>ref|XM_472434.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1356

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 90  gcggcgacgcgggcggcgtc 109
           ||||||||||||||||||||
Sbjct: 320 gcggcgacgcgggcggcgtc 301
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     gcaagcgcggcgacgcgggcggcg 107
              |||||| |||||||||||||||||
Sbjct: 865882 gcaagcccggcgacgcgggcggcg 865905
to top
>gb|L78833.1| Homo sapiens BRCA1 (BRCA1) gene, complete cds; ribosomal protein
             L21-like protein (rpL21) pseudogene, complete sequence;
             Rho7 (Rho7) and VatI (VatI) genes, complete cds; and
             unknown (ifp35) gene, exons 1 through 3 and partial cds
          Length = 117143

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   ttcacatttcattttgcctg 380
             ||||||||||||||||||||
Sbjct: 66836 ttcacatttcattttgcctg 66817
to top
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gcgagcagcagatggtcgac 280
           ||||||||||||||||||||
Sbjct: 578 gcgagcagcagatggtcgac 597
to top
>gb|BT025570.1| Arabidopsis thaliana At1g04070 mRNA, complete cds
          Length = 285

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gggaaggcggcgtggatcgc 210
           ||||||||||||||||||||
Sbjct: 139 gggaaggcggcgtggatcgc 158
to top
>gb|DQ478408.1| Homo sapiens neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; neighbor
              of BRCA1 gene 2 (NBR2) gene, complete cds; and early onset
              breast cancer 1 (BRCA1) gene, partial cds
          Length = 150505

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 135661 ttcacatttcattttgcctg 135642
to top
>gb|DQ190457.1| Homo sapiens clone mck41_A neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; hypothetical protein LOC10230 (NBR2) gene, complete
              cds; and breast cancer 1 early onset (BRCA1) gene, partial
              cds
          Length = 147576

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 132724 ttcacatttcattttgcctg 132705
to top
>gb|DQ190456.1| Homo sapiens clone mck578_U neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; and hypothetical protein LOC10230 (NBR2) and breast
              cancer 1 early onset (BRCA1) genes, complete cds
          Length = 150669

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 132766 ttcacatttcattttgcctg 132747
to top
>gb|DQ190455.1| Homo sapiens clone mck554_A neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; and hypothetical protein LOC10230 (NBR2) and breast
              cancer 1 early onset (BRCA1) genes, complete cds
          Length = 155470

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 135329 ttcacatttcattttgcctg 135310
to top
>gb|DQ190454.1| Homo sapiens clone mck43_A neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; and hypothetical protein LOC10230 (NBR2) and breast
              cancer 1 early onset (BRCA1) genes, complete cds
          Length = 150582

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 128185 ttcacatttcattttgcctg 128166
to top
>gb|DQ190453.1| Homo sapiens clone mck55_A neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; and hypothetical protein LOC10230 (NBR2) and breast
              cancer 1 early onset (BRCA1) genes, complete cds
          Length = 156879

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 134029 ttcacatttcattttgcctg 134010
to top
>gb|DQ190452.1| Homo sapiens clone mck94_A neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; and hypothetical protein LOC10230 (NBR2) and breast
              cancer 1 early onset (BRCA1) genes, complete cds
          Length = 156121

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 131667 ttcacatttcattttgcctg 131648
to top
>gb|DQ190451.1| Homo sapiens clone mck47_A neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; and hypothetical protein LOC10230 (NBR2) and breast
              cancer 1 early onset (BRCA1) genes, complete cds
          Length = 161765

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 131737 ttcacatttcattttgcctg 131718
to top
>gb|DQ190450.1| Homo sapiens clone mck432_A neighbor of BRCA1 gene 1 (NBR1) gene, partial
              cds; and hypothetical protein LOC10230 (NBR2) and breast
              cancer 1 early onset (BRCA1) genes, complete cds
          Length = 167910

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttcacatttcattttgcctg 380
              ||||||||||||||||||||
Sbjct: 132613 ttcacatttcattttgcctg 132594
to top
>ref|XM_755061.1| Ustilago maydis 521 hypothetical protein (UM04007.1) partial mRNA
          Length = 861

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 467 actgctccttctcctgctcg 486
           ||||||||||||||||||||
Sbjct: 511 actgctccttctcctgctcg 492
to top
>gb|AC126044.4| Mus musculus BAC clone RP23-12O8 from chromosome 1, complete sequence
          Length = 213412

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   ggagagaaagatcatgcctt 451
             ||||||||||||||||||||
Sbjct: 37055 ggagagaaagatcatgcctt 37036
to top
>gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, complete sequence
          Length = 207960

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ccaaataaatctctcctctt 346
              ||||||||||||||||||||
Sbjct: 161344 ccaaataaatctctcctctt 161363
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     cggcgcacggccgcgaggcc 157
               ||||||||||||||||||||
Sbjct: 2069869 cggcgcacggccgcgaggcc 2069850
to top
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   aggccgcggcggtggcgggg 172
             ||||||||||||||||||||
Sbjct: 57074 aggccgcggcggtggcgggg 57093
to top
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 91     cggcgacgcgggcggcgtcctggc 114
              |||||||| |||||||||||||||
Sbjct: 198557 cggcgacgtgggcggcgtcctggc 198580
to top
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09,
             complete sequence
          Length = 146506

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gcgagcagcagatggtcgac 280
             ||||||||||||||||||||
Sbjct: 20486 gcgagcagcagatggtcgac 20505
to top
>emb|AL672114.1|MLO672114 Mesorhizobium loti R7A symbiosis island; segment 3/4
          Length = 149050

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ggcggcgcacggccgcgagg 155
             ||||||||||||||||||||
Sbjct: 98847 ggcggcgcacggccgcgagg 98866
to top
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    gcggcgacgcgggcggcgtc 109
             ||||||||||||||||||||
Sbjct: 54507 gcggcgacgcgggcggcgtc 54526
to top
>gb|AF533655.1| Geobacillus stearothermophilus aminopeptidase-like protein, cysteine
            desulfurase (iscS), and proline dipeptidase genes,
            complete cds
          Length = 3461

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 161  gcggtggcggggaagctgctgcgg 184
            ||||||||||||||||||| ||||
Sbjct: 2621 gcggtggcggggaagctgcagcgg 2644
to top
>gb|AY124010.1| Homo sapiens interleukin 1 receptor, type II (IL1R2) gene, complete
            cds
          Length = 23160

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 458  gtgactgtgactgctccttc 477
            ||||||||||||||||||||
Sbjct: 7086 gtgactgtgactgctccttc 7067
to top
>emb|CR615217.1| full-length cDNA clone CS0DL012YD14 of B cells (Ramos cell line)
          Cot 25-normalized of Homo sapiens (human)
          Length = 2526

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 57 agggcatggcgtcgtcctctgctg 80
          |||||||||| |||||||||||||
Sbjct: 39 agggcatggcatcgtcctctgctg 62
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      agcgcggcgacgcgggcggc 106
               ||||||||||||||||||||
Sbjct: 4785607 agcgcggcgacgcgggcggc 4785626
to top
>gb|AC097534.3| Homo sapiens BAC clone RP11-798M19 from 4, complete sequence
          Length = 139455

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   cattttgcctggtatcataa 389
             ||||||||||||||||||||
Sbjct: 10286 cattttgcctggtatcataa 10267
to top
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    ttgttgtgactgtgactgct 472
              ||||||||||||||||||||
Sbjct: 464091 ttgttgtgactgtgactgct 464072
to top
>gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 227751

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 407   cactagtgtgtctgtgtctgttat 430
             |||| |||||||||||||||||||
Sbjct: 37577 cacttgtgtgtctgtgtctgttat 37600
to top
>gb|DQ361836.1| Shigella boydii strain G1226 GalK (galK) gene, complete cds
          Length = 1196

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 436 agaaagatcatgccttgttg 455
           ||||||||||||||||||||
Sbjct: 572 agaaagatcatgccttgttg 591
to top
>gb|AY273801.1| Homo sapiens breast cancer 1, early onset (BRCA1) gene, complete cds
          Length = 82899

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   ttcacatttcattttgcctg 380
             ||||||||||||||||||||
Sbjct: 64480 ttcacatttcattttgcctg 64461
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 287    ctccagcagcaggctcttctgggctcgc 314
              |||||||||||| |||||||| ||||||
Sbjct: 739054 ctccagcagcagcctcttctgcgctcgc 739027
to top
>gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 153081

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caagggagagggcatggcgt 68
            ||||||||||||||||||||
Sbjct: 3256 caagggagagggcatggcgt 3275
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 90       gcggcgacgcgggcggcgtc 109
                ||||||||||||||||||||
Sbjct: 20620073 gcggcgacgcgggcggcgtc 20620092



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 261      gcgagcagcagatggtcgac 280
                ||||||||||||||||||||
Sbjct: 14182720 gcgagcagcagatggtcgac 14182739
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 133      ggtggcggcgcacggccgcg 152
                ||||||||||||||||||||
Sbjct: 15022932 ggtggcggcgcacggccgcg 15022951
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   gtccttcacatttcattttg 376
             ||||||||||||||||||||
Sbjct: 45625 gtccttcacatttcattttg 45606
to top
>emb|BX818699.1|CNS0AEFA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL92ZH09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 561

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gggaaggcggcgtggatcgc 210
           ||||||||||||||||||||
Sbjct: 188 gggaaggcggcgtggatcgc 207
to top
>emb|BX818651.1|CNS0ACO6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL90ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 570

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gggaaggcggcgtggatcgc 210
           ||||||||||||||||||||
Sbjct: 145 gggaaggcggcgtggatcgc 164
to top
>emb|BX818437.1|CNS0ACQ7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 568

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gggaaggcggcgtggatcgc 210
           ||||||||||||||||||||
Sbjct: 145 gggaaggcggcgtggatcgc 164
to top
>gb|AC007165.4| Homo sapiens BAC clone RP11-451C2 from 2, complete sequence
          Length = 45813

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 458   gtgactgtgactgctccttc 477
             ||||||||||||||||||||
Sbjct: 11888 gtgactgtgactgctccttc 11869
to top
>gb|AC023108.4| Homo sapiens BAC clone RP11-121I13 from 2, complete sequence
          Length = 173794

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   cttcacatttcattttgcct 379
             ||||||||||||||||||||
Sbjct: 55194 cttcacatttcattttgcct 55213
to top
>gb|AY086260.1| Arabidopsis thaliana clone 23106 mRNA, complete sequence
          Length = 630

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gggaaggcggcgtggatcgc 210
           ||||||||||||||||||||
Sbjct: 210 gggaaggcggcgtggatcgc 229
to top
>ref|XM_235023.3| PREDICTED: Rattus norvegicus similar to down-regulated in metastasis
            (LOC314713), mRNA
          Length = 8783

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  ctccagcagcaggctcttct 306
            ||||||||||||||||||||
Sbjct: 2821 ctccagcagcaggctcttct 2802
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      gcgcggcgacgcgggcggcg 107
               ||||||||||||||||||||
Sbjct: 1638110 gcgcggcgacgcgggcggcg 1638091
to top
>gb|AC135721.4| Homo sapiens, clone CTD-3199J23, complete sequence
          Length = 150472

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   ttcacatttcattttgcctg 380
             ||||||||||||||||||||
Sbjct: 97523 ttcacatttcattttgcctg 97504
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     ggcggcgcacggccgcgagg 155
               ||||||||||||||||||||
Sbjct: 4748633 ggcggcgcacggccgcgagg 4748614
to top
>dbj|AK175541.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-96-D08
          Length = 568

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gggaaggcggcgtggatcgc 210
           ||||||||||||||||||||
Sbjct: 191 gggaaggcggcgtggatcgc 210
to top
>gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191856

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 407    cactagtgtgtctgtgtctgttat 430
              |||| |||||||||||||||||||
Sbjct: 105841 cacttgtgtgtctgtgtctgttat 105864
to top
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1654_A02
          Length = 128520

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    gcggcgacgcgggcggcgtcctgg 113
             ||||||||| ||||||||||||||
Sbjct: 30793 gcggcgacgagggcggcgtcctgg 30770
to top
>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0683E12
          Length = 165766

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ggtggcggcgcacggccgcg 152
             ||||||||||||||||||||
Sbjct: 13184 ggtggcggcgcacggccgcg 13203
to top
>dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0689D06
          Length = 146551

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ggtggcggcgcacggccgcg 152
             ||||||||||||||||||||
Sbjct: 21846 ggtggcggcgcacggccgcg 21865
to top
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full
           insert sequence
          Length = 1981

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gcgagcagcagatggtcgac 280
           ||||||||||||||||||||
Sbjct: 122 gcgagcagcagatggtcgac 141
to top
>emb|AJ333270.1|HSA333270 Homo sapiens genomic sequence surrounding NotI site, clone
           NR3-BE15RS
          Length = 693

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 attttgcctggtatcataag 390
           ||||||||||||||||||||
Sbjct: 370 attttgcctggtatcataag 351
to top
>ref|NM_211069.1| Eremothecium gossypii AFR168Wp (AFR168W), mRNA
          Length = 4743

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 287 ctccagcagcaggctcttctgggctcgc 314
           |||||||||||| |||||||| ||||||
Sbjct: 114 ctccagcagcagcctcttctgcgctcgc 87
to top
>dbj|AK071948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078J21, full
           insert sequence
          Length = 1334

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gcgagcagcagatggtcgac 280
           ||||||||||||||||||||
Sbjct: 589 gcgagcagcagatggtcgac 608
to top
>gb|AC134787.6| Mus musculus chromosome 1, clone RP24-477E13, complete sequence
          Length = 150960

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   ggagagaaagatcatgcctt 451
             ||||||||||||||||||||
Sbjct: 49960 ggagagaaagatcatgcctt 49979
to top
>emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on chromosome 4, complete
              sequence
          Length = 157168

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 150    gcgaggccgcggcggtggcgggga 173
              ||||||||||||||| ||||||||
Sbjct: 138474 gcgaggccgcggcggcggcgggga 138497
to top
>emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on chromosome 3 Contains the 3'
             part of the gene for calcium channel, voltage-dependent, L
             type, alpha 2D subunit (KIAA0558) and the first exon of
             the gene for PL6 protein (deleted in Small Cell Lung
             Carcinoma). Contains ESTs, GSSs and a putative CpG island,
             complete sequence
          Length = 27844

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 57    agggcatggcgtcgtcctctgctg 80
             |||||||||| |||||||||||||
Sbjct: 20887 agggcatggcatcgtcctctgctg 20910
to top
>emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on chromosome 2, complete
             sequence
          Length = 95855

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   tgccttgttgttgtgactgt 465
             ||||||||||||||||||||
Sbjct: 78856 tgccttgttgttgtgactgt 78875
to top
>gb|AC002411.1|F20D22 Arabidopsis thaliana chromosome 1 BAC F20D22 sequence, complete
             sequence
          Length = 78259

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   gggaaggcggcgtggatcgc 210
             ||||||||||||||||||||
Sbjct: 74899 gggaaggcggcgtggatcgc 74918
to top
>gb|U48401.1|RNU48401 Rattus norvegicus TGF-beta type I receptor gene, exon 1
          Length = 1766

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 150  gcgaggccgcggcggtggcgggga 173
            ||||||||||||||| ||||||||
Sbjct: 1536 gcgaggccgcggcggcggcgggga 1559
to top
>dbj|AB215778.1| Equus caballus DNA, microsatellite TKY1835
          Length = 264

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 gtgtgtctgtgtctgttatc 431
           ||||||||||||||||||||
Sbjct: 91  gtgtgtctgtgtctgttatc 72
to top
>emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on chromosome 4, complete
            sequence
          Length = 216944

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  ccaaataaatctctcctctt 346
            ||||||||||||||||||||
Sbjct: 3348 ccaaataaatctctcctctt 3329
to top
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   gtccttcacatttcattttg 376
             ||||||||||||||||||||
Sbjct: 45625 gtccttcacatttcattttg 45606
to top
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   gtccttcacatttcattttg 376
             ||||||||||||||||||||
Sbjct: 55012 gtccttcacatttcattttg 54993
to top
>gb|M30948.1|GORRGIT Gorilla rRNA gene internal transcribed spacer 1 (ITS1)
          Length = 987

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 gcgaggccgcggcggtggcg 169
           ||||||||||||||||||||
Sbjct: 13  gcgaggccgcggcggtggcg 32
to top
>gb|AC003027.1| Arabidopsis thaliana chromosome I BAC F21M11 genomic sequence,
            complete sequence
          Length = 119914

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  gggaaggcggcgtggatcgc 210
            ||||||||||||||||||||
Sbjct: 5902 gggaaggcggcgtggatcgc 5921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,922,194
Number of Sequences: 3902068
Number of extensions: 4922194
Number of successful extensions: 134223
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132361
Number of HSP's gapped (non-prelim): 1862
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top