ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart36b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full... 696 0.0
2ref|NM_187692.1| Oryza sativa (japonica cultivar-group), predic... 161 3e-36
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 3e-24
4gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
6gb|AY104352.1| Zea mays PCO064372 mRNA sequence 88 4e-14
7ref|XM_473140.1| Oryza sativa (japonica cultivar-group), predic... 68 3e-08
8emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 68 3e-08
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
10dbj|AK063625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
11gb|BT017540.1| Zea mays clone EL01N0422C08.c mRNA sequence 64 5e-07
12gb|AY370890.1| Hordeum vulgare caleosin 1 (Clo1) gene, complete cds 64 5e-07
13gb|AY370889.1| Hordeum vulgare caleosin 1 (Clo1) mRNA, complete cds 64 5e-07
14gb|AY104745.1| Zea mays PCO069403 mRNA sequence 64 5e-07
15gb|AY370892.1| Hordeum vulgare caleosin 2 (Clo2) gene, complete cds 52 0.002
16gb|AY370891.1| Hordeum vulgare caleosin 2 (Clo2) mRNA, complete cds 52 0.002
17gb|AY043288.1| Hordeum vulgare calcium-binding protein 1 (CaBP1)... 52 0.002
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
20gb|AF325719.1|AF325719 Pennisetum ciliare calmodulin-like protei... 44 0.47
21dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
22dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
23dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
24dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
25dbj|AK104598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
26dbj|AK073727.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
27dbj|AK060792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
28ref|XM_463272.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
29gb|AY022639.1| Oryza sativa microsatellite MRG4964 containing (C... 42 1.9
30gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence 42 1.9
31gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 42 1.9
32gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.9
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
34dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
35dbj|AK072726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
36gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome... 40 7.4
37ref|XM_480059.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.4
38ref|XM_528515.1| PREDICTED: Pan troglodytes similar to doublesex... 40 7.4
39ref|NM_190058.1| Oryza sativa (japonica cultivar-group), predic... 40 7.4
40ref|XM_479553.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.4
41ref|XM_418482.1| PREDICTED: Gallus gallus similar to DEAH (Asp-G... 40 7.4
42ref|NM_021240.2| Homo sapiens doublesex and mab-3 related transc... 40 7.4
43gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.4
44gb|AY165140.1| Certhilauda albofasciata 16S ribosomal RNA gene, ... 40 7.4
45emb|AL136365.9| Human DNA sequence from clone RP11-143M15 on chr... 40 7.4
46emb|AL049636.22|HSDJ792G4 Human DNA sequence from clone RP4-792G... 40 7.4
47gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.4
48gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
49gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.4
50dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.4
51gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.4
52dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
53dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
54dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
55dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
56gb|AF193873.1|AF193873 Homo sapiens testis-specific protein mRNA... 40 7.4
57gb|AF193872.1|AF193872 Homo sapiens putative DM domain protein g... 40 7.4
58dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
59dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
60dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
61dbj|AK109541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
62dbj|AK109470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
63emb|AJ328770.1|HSA328770 Homo sapiens genomic sequence surroundi... 40 7.4
64dbj|AK073548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
65emb|AJ301581.1|HSA301581 Homo sapiens partial mRNA for doublesex... 40 7.4
66dbj|AK071435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
67gb|AC154475.2| Mus musculus BAC clone RP24-130B12 from 17, compl... 40 7.4
68dbj|AK062850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
69gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, comple... 40 7.4 
>gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full insert mRNA
           sequence
          Length = 1157

 Score =  696 bits (351), Expect = 0.0
 Identities = 444/474 (93%), Gaps = 1/474 (0%)
 Strand = Plus / Plus

                                                                       
Query: 74  agatcctgcagacccggctcgtctcgagtaaccgccgccatgtcgtcgtcgaccgatccg 133
           ||||||||||  | ||||||||| ||||||||||||     |||||||||| ||||||||
Sbjct: 132 agatcctgcaagctcggctcgtcgcgagtaaccgccatgtcgtcgtcgtcgtccgatccg 191

                                                                       
Query: 134 tcgctggcgaccgaggcgccccaggcggccgtcaccagagagcggaagctcaaccccgac 193
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||
Sbjct: 192 tcgctggcgaccgaggcgccccaggcggccgtcaccagcgagcgcaagctcaaccgcgac 251

                                                                       
Query: 194 ctgcaggagcagctcgccaagccatatctggctcgagca-tggcggcggttgacccgagc 252
           ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||
Sbjct: 252 ctgcaggagcagctcgccaagccatatctggccagagcaatggcggcggttgacccgagc 311

                                                                       
Query: 253 cacccggagggcagcaaggggagggacaccaagggcatgagcgtgctccagcagcacgcc 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cacccggagggcagcaaggggagggacaccaagggcatgagcgtgctccagcagcacgcc 371

                                                                       
Query: 313 gccttcttcgaccgcaacggcgacggggtaatctacccatgggagaccttccaaagcctg 372
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 372 gccttcttcgaccgcaacggcgacggggtcatctacccatgggagaccttccagagcctg 431

                                                                       
Query: 373 cgagcgatcgggcttgggtccccttcagccttcggaacatccatactcctccacctcgtc 432
           ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cgagcaatcgggcttgggtcgccttcagccttcggaacatccatactcctccacctcgtc 491

                                                                       
Query: 433 ctcacttatcctactcaaccggggtggatgccttcccctctgctttcagtccatataaag 492
           ||||||||||||||||||||||| |||||||||||||||||||| ||  |||||||||||
Sbjct: 492 ctcacttatcctactcaaccgggatggatgccttcccctctgctgtcgatccatataaag 551

                                                                 
Query: 493 aacatccacnaggggcagcatgggagcgattctgagacgtatgacactgaaggg 546
           |||||||||  |||  |||| |||||||||||||||||||||||||| ||||||
Sbjct: 552 aacatccacaggggcaagcacgggagcgattctgagacgtatgacacagaaggg 605
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>ref|NM_187692.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 816

 Score =  161 bits (81), Expect = 3e-36
 Identities = 178/209 (85%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 173 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagca 232
           |||||||||||||||||| ||||||||||||||||  ||||||||||||| ||  | || 
Sbjct: 175 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccatatctcgcgagggct 234

                                                                       
Query: 233 -tggcggcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatg 291
            | |||||||| ||||||||||||||| |||| | |   ||| | ||| ||   ||||||
Sbjct: 235 ctcgcggcggtggacccgagccacccgcaggggacccgtgggcgcgacgcccgcggcatg 294

                                                                       
Query: 292 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 351
           ||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||| 
Sbjct: 295 agcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatctacccc 354

                                        
Query: 352 tgggagaccttccaaagcctgcgagcgat 380
           ||||||||||||||| | ||| |||||||
Sbjct: 355 tgggagaccttccaagggctgagagcgat 383



 Score =  125 bits (63), Expect = 2e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                       
Query: 413 ccatactcctccacctcgtcctcacttatcctactcaaccggggtggatgccttcccctc 472
           |||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||
Sbjct: 416 ccatactcatcaacctcgtcctcagctatcctactcaaccggggtggatgccttctcctc 475

                                                                       
Query: 473 tgctttcagtccatataaagaacatccacnaggggcagcatgggagcgattctgagacgt 532
           || ||||  |||||||||||||||| ||| ||||  |||||||||| || |||||  | |
Sbjct: 476 tgttttccatccatataaagaacattcacaagggtaagcatgggagtgactctgaagcat 535

                         
Query: 533 atgacactgaaggg 546
           |||| |||||||||
Sbjct: 536 atgatactgaaggg 549
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                           
Query: 286     ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 345
               ||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||
Sbjct: 6387260 ggcatgagcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatc 6387319

                                    
Query: 346     tacccatgggagaccttccaa 366
               ||||| |||||||||||||||
Sbjct: 6387320 tacccctgggagaccttccaa 6387340



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                           
Query: 453     ggggtggatgccttcccctctgctttcagtccatataaagaacatccacnaggggcagca 512
               ||||||||||||||| |||||| ||||  |||||||||||||||| ||| ||||  ||||
Sbjct: 6388121 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 6388180

                                                 
Query: 513     tgggagcgattctgagacgtatgacactgaaggg 546
               |||||| || |||||  | ||||| |||||||||
Sbjct: 6388181 tgggagtgactctgaagcatatgatactgaaggg 6388214



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                             
Query: 173     gagcggaagctcaaccccgacctgcaggagcagctcgccaagccat 218
               |||||||||||||||||| ||||||||||||||||  |||||||||
Sbjct: 6386607 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccat 6386652



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 413     ccatactcctccacctcgtcctcacttatcctactcaaccgg 454
               |||||||| || ||||||||||||  ||||||||||||||||
Sbjct: 6387684 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 6387725



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 319      ttcgaccgcaacggcgacgg 338
                ||||||||||||||||||||
Sbjct: 12199017 ttcgaccgcaacggcgacgg 12198998
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>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                         
Query: 286   ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 345
             ||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||
Sbjct: 67386 ggcatgagcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatc 67445

                                  
Query: 346   tacccatgggagaccttccaa 366
             ||||| |||||||||||||||
Sbjct: 67446 tacccctgggagaccttccaa 67466



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                         
Query: 453   ggggtggatgccttcccctctgctttcagtccatataaagaacatccacnaggggcagca 512
             ||||||||||||||| |||||| ||||  |||||||||||||||| ||| ||||  ||||
Sbjct: 68247 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 68306

                                               
Query: 513   tgggagcgattctgagacgtatgacactgaaggg 546
             |||||| || |||||  | ||||| |||||||||
Sbjct: 68307 tgggagtgactctgaagcatatgatactgaaggg 68340



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 173   gagcggaagctcaaccccgacctgcaggagcagctcgccaagccat 218
             |||||||||||||||||| ||||||||||||||||  |||||||||
Sbjct: 66733 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccat 66778



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 413   ccatactcctccacctcgtcctcacttatcctactcaaccgg 454
             |||||||| || ||||||||||||  ||||||||||||||||
Sbjct: 67810 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 67851
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                           
Query: 286     ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 345
               ||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||
Sbjct: 6386473 ggcatgagcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatc 6386532

                                    
Query: 346     tacccatgggagaccttccaa 366
               ||||| |||||||||||||||
Sbjct: 6386533 tacccctgggagaccttccaa 6386553



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                           
Query: 453     ggggtggatgccttcccctctgctttcagtccatataaagaacatccacnaggggcagca 512
               ||||||||||||||| |||||| ||||  |||||||||||||||| ||| ||||  ||||
Sbjct: 6387334 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 6387393

                                                 
Query: 513     tgggagcgattctgagacgtatgacactgaaggg 546
               |||||| || |||||  | ||||| |||||||||
Sbjct: 6387394 tgggagtgactctgaagcatatgatactgaaggg 6387427



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                             
Query: 173     gagcggaagctcaaccccgacctgcaggagcagctcgccaagccat 218
               |||||||||||||||||| ||||||||||||||||  |||||||||
Sbjct: 6385820 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccat 6385865



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 413     ccatactcctccacctcgtcctcacttatcctactcaaccgg 454
               |||||||| || ||||||||||||  ||||||||||||||||
Sbjct: 6386897 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 6386938



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 319      ttcgaccgcaacggcgacgg 338
                ||||||||||||||||||||
Sbjct: 12195780 ttcgaccgcaacggcgacgg 12195761
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>gb|AY104352.1| Zea mays PCO064372 mRNA sequence
          Length = 912

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                       
Query: 286 ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 345
           |||||||||||||| ||||||||||  || ||||||||||||||||||||||| ||  ||
Sbjct: 426 ggcatgagcgtgcttcagcagcacgtggctttcttcgaccgcaacggcgacggcgtcgtc 485

                                           
Query: 346 tacccatgggagaccttccaaagcctgcgagc 377
           ||||| |||||||| ||| || || |||||||
Sbjct: 486 tacccctgggagactttcaaaggcatgcgagc 517



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 132 cgtcgctggcgaccgaggcgccccaggcggccgtcaccagagagcggaagctcaaccccg 191
           |||| |||| ||| ||||||||||||||  ||||||| || ||||| | |||||||||||
Sbjct: 271 cgtctctggagacggaggcgccccaggctaccgtcacgagggagcgcaggctcaaccccg 330

                                          
Query: 192 acctgcaggagcagctcgccaagccatatct 222
           ||||||||||||| ||  |||||||||||||
Sbjct: 331 acctgcaggagcaccttcccaagccatatct 361
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>ref|XM_473140.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 732

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                       
Query: 292 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 351
           |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 199 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 258

                     
Query: 352 tgggagacct 361
           ||||| ||||
Sbjct: 259 tgggaaacct 268
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>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
             complete sequence
          Length = 158601

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 292   agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 351
             |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 15524 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 15465

                       
Query: 352   tgggagacct 361
             ||||| ||||
Sbjct: 15464 tgggaaacct 15455
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 292      agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 351
                |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 25529328 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 25529269

                          
Query: 352      tgggagacct 361
                ||||| ||||
Sbjct: 25529268 tgggaaacct 25529259
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>dbj|AK063625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-E12, full
           insert sequence
          Length = 1150

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                       
Query: 292 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 351
           |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 401 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 460

                     
Query: 352 tgggagacct 361
           ||||| ||||
Sbjct: 461 tgggaaacct 470
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>gb|BT017540.1| Zea mays clone EL01N0422C08.c mRNA sequence
          Length = 1288

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 288 catgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatcta 347
           |||||||||| | |||||||||| |||||||||||||||| ||| | ||||  | |||||
Sbjct: 501 catgagcgtgttgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatcta 560

                       
Query: 348 cccatgggagac 359
           ||| ||||||||
Sbjct: 561 cccttgggagac 572



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 198 aggagcagctcgccaagccatatctggctcgagc 231
           ||||||| ||| |||||||||||||||| |||||
Sbjct: 404 aggagcacctccccaagccatatctggcgcgagc 437
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>gb|AY370890.1| Hordeum vulgare caleosin 1 (Clo1) gene, complete cds
          Length = 2652

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 288 catgagcgtgctccagcagcacgccgccttcttcgaccgc 327
           |||||||||||| |||||||||| ||||||||||||||||
Sbjct: 559 catgagcgtgctgcagcagcacgtcgccttcttcgaccgc 598
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>gb|AY370889.1| Hordeum vulgare caleosin 1 (Clo1) mRNA, complete cds
          Length = 1069

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 288 catgagcgtgctccagcagcacgccgccttcttcgaccgc 327
           |||||||||||| |||||||||| ||||||||||||||||
Sbjct: 369 catgagcgtgctgcagcagcacgtcgccttcttcgaccgc 408
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>gb|AY104745.1| Zea mays PCO069403 mRNA sequence
          Length = 1383

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 288 catgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatcta 347
           |||||||||| | |||||||||| |||||||||||||||| ||| | ||||  | |||||
Sbjct: 500 catgagcgtgttgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatcta 559

                       
Query: 348 cccatgggagac 359
           ||| ||||||||
Sbjct: 560 cccttgggagac 571



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 198 aggagcagctcgccaagccatatctggctcgagc 231
           ||||||| ||| |||||||||||||||| |||||
Sbjct: 403 aggagcacctccccaagccatatctggcgcgagc 436
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>gb|AY370892.1| Hordeum vulgare caleosin 2 (Clo2) gene, complete cds
          Length = 2118

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 291 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 350
           ||||||||| ||||||||||  ||||||||||||    | |||||||| || ||||||||
Sbjct: 364 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 423

                 
Query: 351 atggga 356
           ||||||
Sbjct: 424 atggga 429
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>gb|AY370891.1| Hordeum vulgare caleosin 2 (Clo2) mRNA, complete cds
          Length = 1132

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 291 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 350
           ||||||||| ||||||||||  ||||||||||||    | |||||||| || ||||||||
Sbjct: 204 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 263

                 
Query: 351 atggga 356
           ||||||
Sbjct: 264 atggga 269
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>gb|AY043288.1| Hordeum vulgare calcium-binding protein 1 (CaBP1) mRNA, complete
           cds
          Length = 963

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 291 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 350
           ||||||||| ||||||||||  ||||||||||||    | |||||||| || ||||||||
Sbjct: 242 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 301

                 
Query: 351 atggga 356
           ||||||
Sbjct: 302 atggga 307
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 317      tcttcgaccgcaacggcgacgg 338
                ||||||||||||||||||||||
Sbjct: 14581136 tcttcgaccgcaacggcgacgg 14581115
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 305     agcacgccgccttcttcgaccgcaac 330
               |||||| |||||||||||||||||||
Sbjct: 8025157 agcacgtcgccttcttcgaccgcaac 8025132
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>gb|AF325719.1|AF325719 Pennisetum ciliare calmodulin-like protein mRNA, complete cds
          Length = 965

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 317 tcttcgaccgcaacggcgacgg 338
           ||||||||||||||||||||||
Sbjct: 176 tcttcgaccgcaacggcgacgg 197
to top
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1294_G06
          Length = 115468

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 317   tcttcgaccgcaacggcgacgg 338
             ||||||||||||||||||||||
Sbjct: 79425 tcttcgaccgcaacggcgacgg 79404
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>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0046H10
          Length = 155544

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 305    agcacgccgccttcttcgaccgcaac 330
              |||||| |||||||||||||||||||
Sbjct: 132675 agcacgtcgccttcttcgaccgcaac 132650
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>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592E11
          Length = 153734

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 305   agcacgccgccttcttcgaccgcaac 330
             |||||| |||||||||||||||||||
Sbjct: 48926 agcacgtcgccttcttcgaccgcaac 48901
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>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0643D11
          Length = 137525

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 317  tcttcgaccgcaacggcgacgg 338
            ||||||||||||||||||||||
Sbjct: 2803 tcttcgaccgcaacggcgacgg 2782
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>dbj|AK104598.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F08, full
           insert sequence
          Length = 1063

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 305 agcacgccgccttcttcgaccgcaac 330
           |||||| |||||||||||||||||||
Sbjct: 336 agcacgtcgccttcttcgaccgcaac 361
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>dbj|AK073727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057G06, full
           insert sequence
          Length = 1064

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 305 agcacgccgccttcttcgaccgcaac 330
           |||||| |||||||||||||||||||
Sbjct: 337 agcacgtcgccttcttcgaccgcaac 362
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>dbj|AK060792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E03, full
            insert sequence
          Length = 2067

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 305  agcacgccgccttcttcgaccgcaac 330
            |||||| |||||||||||||||||||
Sbjct: 1386 agcacgtcgccttcttcgaccgcaac 1411
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>ref|XM_463272.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 636

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 318 cttcgaccgcaacggcgacgg 338
           |||||||||||||||||||||
Sbjct: 213 cttcgaccgcaacggcgacgg 233
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>gb|AY022639.1| Oryza sativa microsatellite MRG4964 containing (CAG)X10, closest to
           marker C585, genomic sequence
          Length = 230

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 318 cttcgaccgcaacggcgacgg 338
           |||||||||||||||||||||
Sbjct: 184 cttcgaccgcaacggcgacgg 204
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>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   ttcgaccgcaacggcgacggg 339
             |||||||||||||||||||||
Sbjct: 46332 ttcgaccgcaacggcgacggg 46352



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ttcgaccgcaacggcgacgg 338
             ||||||||||||||||||||
Sbjct: 46113 ttcgaccgcaacggcgacgg 46132
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 294     cgtgctccagcagcacgccgc 314
               |||||||||||||||||||||
Sbjct: 1426241 cgtgctccagcagcacgccgc 1426261
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 105     ccgccgccatgtcgtcgtcga 125
               |||||||||||||||||||||
Sbjct: 1904917 ccgccgccatgtcgtcgtcga 1904937
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 318      cttcgaccgcaacggcgacgg 338
                |||||||||||||||||||||
Sbjct: 17577570 cttcgaccgcaacggcgacgg 17577590



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 105      ccgccgccatgtcgtcgtcg 124
                ||||||||||||||||||||
Sbjct: 41065568 ccgccgccatgtcgtcgtcg 41065549
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>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436D06
          Length = 148246

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 318   cttcgaccgcaacggcgacgg 338
             |||||||||||||||||||||
Sbjct: 95142 cttcgaccgcaacggcgacgg 95162
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>dbj|AK072726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139K02, full
           insert sequence
          Length = 891

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 318 cttcgaccgcaacggcgacgg 338
           |||||||||||||||||||||
Sbjct: 248 cttcgaccgcaacggcgacgg 268
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>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete
            sequence
          Length = 243701

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ctccccaccctgcgctcccg 54
            ||||||||||||||||||||
Sbjct: 5643 ctccccaccctgcgctcccg 5624
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>ref|XM_480059.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 931

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ttcgaccgcaacggcgacgg 338
           ||||||||||||||||||||
Sbjct: 199 ttcgaccgcaacggcgacgg 218
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>ref|XM_528515.1| PREDICTED: Pan troglodytes similar to doublesex and mab-3 related
           transcription factor 3; testis-specific protein;
           DMRT-like family A3 (LOC473145), mRNA
          Length = 2001

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 ctgcaggagcagctcgccaagcca 217
           ||||||| ||||||||||||||||
Sbjct: 148 ctgcaggcgcagctcgccaagcca 171
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>ref|NM_190058.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 ccgccgccatgtcgtcgtcg 124
           ||||||||||||||||||||
Sbjct: 143 ccgccgccatgtcgtcgtcg 162
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>ref|XM_479553.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 851

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ttcgaccgcaacggcgacgg 338
           ||||||||||||||||||||
Sbjct: 191 ttcgaccgcaacggcgacgg 210
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>ref|XM_418482.1| PREDICTED: Gallus gallus similar to DEAH (Asp-Glu-Ala-His) box
            polypeptide 30 isoform 2; DEAD/H (Asp-Glu-Ala-Asp/His)
            box polypeptide 30 (LOC420377), mRNA
          Length = 2373

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  gaagctcaaccccgacctgc 197
            ||||||||||||||||||||
Sbjct: 1896 gaagctcaaccccgacctgc 1915
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>ref|NM_021240.2| Homo sapiens doublesex and mab-3 related transcription factor 3
           (DMRT3), mRNA
          Length = 2184

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 ctgcaggagcagctcgccaagcca 217
           ||||||| ||||||||||||||||
Sbjct: 468 ctgcaggcgcagctcgccaagcca 491
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     cgaccgatccgtcgctggcg 142
               ||||||||||||||||||||
Sbjct: 4202962 cgaccgatccgtcgctggcg 4202943
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>gb|AY165140.1| Certhilauda albofasciata 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 603

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 409 acatccatactcctccacctcgtcctcacttatcct 444
           |||| |||||||| ||||||||  ||||||||||||
Sbjct: 110 acatacatactcccccacctcgggctcacttatcct 145
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>emb|AL136365.9| Human DNA sequence from clone RP11-143M15 on chromosome 9p23-24.3
              Contains the DMRT1 gene for doublesex and mab-3 related
              transcription factor 1, the DMRT3 gene for doublesex and
              mab-3 related transcription factor 3 and four CpG islands,
              complete sequence
          Length = 179006

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 194    ctgcaggagcagctcgccaagcca 217
              ||||||| ||||||||||||||||
Sbjct: 155285 ctgcaggcgcagctcgccaagcca 155308
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>emb|AL049636.22|HSDJ792G4 Human DNA sequence from clone RP4-792G4 on chromosome 1p31.2-32.2
             Contains the 5' end of the ALG6 gene for asparagine-linked
             glycosylation 6 homolog (yeast alpha-1
             3-glucosyltransferase), a DnaJ (Hsp40) homolog subfamily C
             member 7 (DNAJC7) pseudogene, the FOXD3 gene for forkhead
             box D3, a novel gene, the 5' end of a novel gene and a CpG
             island, complete sequence
          Length = 142728

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   ggagggcagcaaggggaggg 277
             ||||||||||||||||||||
Sbjct: 58331 ggagggcagcaaggggaggg 58312
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>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0076E06, from chromosome 3, complete sequence
          Length = 126323

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   ttcgaccgcaacggcgacgg 338
             ||||||||||||||||||||
Sbjct: 91626 ttcgaccgcaacggcgacgg 91607
to top
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09,
             complete sequence
          Length = 148740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   ccgccgccatgtcgtcgtcg 124
             ||||||||||||||||||||
Sbjct: 88968 ccgccgccatgtcgtcgtcg 88949
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     cgaccgatccgtcgctggcg 142
               ||||||||||||||||||||
Sbjct: 1378453 cgaccgatccgtcgctggcg 1378472
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 318     cttcgaccgcaacggcgacggggt 341
               |||||||||| |||||||||||||
Sbjct: 3330810 cttcgaccgcgacggcgacggggt 3330787
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     cgaccgatccgtcgctggcg 142
               ||||||||||||||||||||
Sbjct: 4577606 cgaccgatccgtcgctggcg 4577587
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     ttcgaccgcaacggcgacgg 338
               ||||||||||||||||||||
Sbjct: 2488933 ttcgaccgcaacggcgacgg 2488952
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 319      ttcgaccgcaacggcgacgg 338
                ||||||||||||||||||||
Sbjct: 28835852 ttcgaccgcaacggcgacgg 28835871
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 105      ccgccgccatgtcgtcgtcg 124
                ||||||||||||||||||||
Sbjct: 23264911 ccgccgccatgtcgtcgtcg 23264892
to top
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492G09
          Length = 142239

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ccgccgccatgtcgtcgtcg 124
              ||||||||||||||||||||
Sbjct: 102498 ccgccgccatgtcgtcgtcg 102479
to top
>gb|AF193873.1|AF193873 Homo sapiens testis-specific protein mRNA, partial cds,
           alternatively spliced
          Length = 1760

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 ctgcaggagcagctcgccaagcca 217
           ||||||| ||||||||||||||||
Sbjct: 45  ctgcaggcgcagctcgccaagcca 68
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>gb|AF193872.1|AF193872 Homo sapiens putative DM domain protein gene, partial cds
          Length = 685

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 ctgcaggagcagctcgccaagcca 217
           ||||||| ||||||||||||||||
Sbjct: 592 ctgcaggcgcagctcgccaagcca 615
to top
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008J01
          Length = 159900

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ttcgaccgcaacggcgacgg 338
             ||||||||||||||||||||
Sbjct: 93538 ttcgaccgcaacggcgacgg 93557
to top
>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0571B09
          Length = 147382

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 319  ttcgaccgcaacggcgacgg 338
            ||||||||||||||||||||
Sbjct: 3290 ttcgaccgcaacggcgacgg 3309
to top
>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0665F09
          Length = 147102

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ttcgaccgcaacggcgacgg 338
             ||||||||||||||||||||
Sbjct: 50562 ttcgaccgcaacggcgacgg 50581
to top
>dbj|AK109541.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A09, full
           insert sequence
          Length = 826

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ttcgaccgcaacggcgacgg 338
           ||||||||||||||||||||
Sbjct: 205 ttcgaccgcaacggcgacgg 224
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>dbj|AK109470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E03, full
           insert sequence
          Length = 2176

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ttcgaccgcaacggcgacgg 338
           ||||||||||||||||||||
Sbjct: 205 ttcgaccgcaacggcgacgg 224
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>emb|AJ328770.1|HSA328770 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-NH18C
          Length = 769

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 ctgcaggagcagctcgccaagcca 217
           ||||||| ||||||||||||||||
Sbjct: 46  ctgcaggcgcagctcgccaagcca 69
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>dbj|AK073548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C05, full
           insert sequence
          Length = 1078

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 ccgccgccatgtcgtcgtcg 124
           ||||||||||||||||||||
Sbjct: 374 ccgccgccatgtcgtcgtcg 393
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>emb|AJ301581.1|HSA301581 Homo sapiens partial mRNA for doublesex-mab-3 (DM) domain (DMRT3
           gene)
          Length = 372

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 ctgcaggagcagctcgccaagcca 217
           ||||||| ||||||||||||||||
Sbjct: 295 ctgcaggcgcagctcgccaagcca 318
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>dbj|AK071435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J12, full
           insert sequence
          Length = 931

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ttcgaccgcaacggcgacgg 338
           ||||||||||||||||||||
Sbjct: 199 ttcgaccgcaacggcgacgg 218
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>gb|AC154475.2| Mus musculus BAC clone RP24-130B12 from 17, complete sequence
          Length = 117680

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ctccccaccctgcgctcccg 54
             ||||||||||||||||||||
Sbjct: 58415 ctccccaccctgcgctcccg 58396
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>dbj|AK062850.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A02, full
           insert sequence
          Length = 851

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ttcgaccgcaacggcgacgg 338
           ||||||||||||||||||||
Sbjct: 191 ttcgaccgcaacggcgacgg 210
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>gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, complete sequence
          Length = 193186

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    gcttgggtccccttcagcct 403
              ||||||||||||||||||||
Sbjct: 119823 gcttgggtccccttcagcct 119842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,547,590
Number of Sequences: 3902068
Number of extensions: 3547590
Number of successful extensions: 72287
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71264
Number of HSP's gapped (non-prelim): 1017
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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