Clone Name | bart36b09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK121862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103A19, full insert sequence Length = 1113 Score = 412 bits (208), Expect = e-112 Identities = 301/332 (90%) Strand = Plus / Plus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 164 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 223 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 313 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 224 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 283 Query: 314 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 373 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 284 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 343 Query: 374 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 433 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 344 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 403 Query: 434 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 493 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 404 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 463 Query: 494 gctcatgagtgggagaagcatggaacatgctc 525 ||||||||||||||||| |||||||||||||| Sbjct: 464 gctcatgagtgggagaaacatggaacatgctc 495
>dbj|AK105061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H09, full insert sequence Length = 1245 Score = 412 bits (208), Expect = e-112 Identities = 301/332 (90%) Strand = Plus / Plus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 194 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 253 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 313 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 254 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 313 Query: 314 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 373 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 314 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 373 Query: 374 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 433 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 374 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 433 Query: 434 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 493 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 434 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 493 Query: 494 gctcatgagtgggagaagcatggaacatgctc 525 ||||||||||||||||| |||||||||||||| Sbjct: 494 gctcatgagtgggagaaacatggaacatgctc 525
>dbj|AK100403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086O14, full insert sequence Length = 1222 Score = 412 bits (208), Expect = e-112 Identities = 301/332 (90%) Strand = Plus / Plus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 184 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 243 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 313 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 244 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 303 Query: 314 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 373 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 304 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 363 Query: 374 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 433 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 364 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 423 Query: 434 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 493 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 424 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 483 Query: 494 gctcatgagtgggagaagcatggaacatgctc 525 ||||||||||||||||| |||||||||||||| Sbjct: 484 gctcatgagtgggagaaacatggaacatgctc 515
>dbj|AK065055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J04, full insert sequence Length = 1107 Score = 412 bits (208), Expect = e-112 Identities = 301/332 (90%) Strand = Plus / Plus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 193 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 252 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 313 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 253 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 312 Query: 314 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 373 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 313 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 372 Query: 374 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 433 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 373 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 432 Query: 434 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 493 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 433 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 492 Query: 494 gctcatgagtgggagaagcatggaacatgctc 525 ||||||||||||||||| |||||||||||||| Sbjct: 493 gctcatgagtgggagaaacatggaacatgctc 524
>dbj|AK061505.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E09, full insert sequence Length = 1242 Score = 412 bits (208), Expect = e-112 Identities = 301/332 (90%) Strand = Plus / Plus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 192 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 251 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 313 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 252 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 311 Query: 314 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 373 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 312 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 371 Query: 374 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 433 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 372 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 431 Query: 434 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 493 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 432 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 491 Query: 494 gctcatgagtgggagaagcatggaacatgctc 525 ||||||||||||||||| |||||||||||||| Sbjct: 492 gctcatgagtgggagaaacatggaacatgctc 523
>gb|BT016738.1| Zea mays clone Contig571 mRNA sequence Length = 1070 Score = 254 bits (128), Expect = 3e-64 Identities = 281/332 (84%) Strand = Plus / Plus Query: 202 gcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatctgctcctc 261 |||||| |||||||||||||||||||| | || |||||||| |||||||||||| |||| Sbjct: 227 gcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccatctgcgcctc 286 Query: 262 cacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccacacgttcac 321 ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| Sbjct: 287 cacccgccactgctgcgccaccaacggctgctgccgctcggagccgctccagacgttcac 346 Query: 322 gatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacac 381 |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||| Sbjct: 347 gatccacgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcac 406 Query: 382 cagtttcgacatggacaagataacgcctttgaagcccactctggacaagtactggccgtc 441 | ||||| |||||||||||| ||| ||||| || ||||||||||||||||| Sbjct: 407 ccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagtactggccgtc 466 Query: 442 cctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgggctcatga 501 ||||||||| || ||| || || ||||| || | ||| | |||||||||||| || Sbjct: 467 cctctactgctccaaatctggaacatgcttcagcggcaagggactcttctgggctcacga 526 Query: 502 gtgggagaagcatggaacatgctcggcccctg 533 ||||||||| |||||||| ||||| ||||||| Sbjct: 527 gtgggagaaacatggaacctgctctgcccctg 558
>gb|AY107592.1| Zea mays PCO142364 mRNA sequence Length = 1160 Score = 254 bits (128), Expect = 3e-64 Identities = 281/332 (84%) Strand = Plus / Plus Query: 202 gcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatctgctcctc 261 |||||| |||||||||||||||||||| | || |||||||| |||||||||||| |||| Sbjct: 163 gcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccatctgcgcctc 222 Query: 262 cacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccacacgttcac 321 ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| Sbjct: 223 cacccgccactgctgcgccaccaacggctgctgccgctcggagccgctccagacgttcac 282 Query: 322 gatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacac 381 |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||| Sbjct: 283 gatccacgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcac 342 Query: 382 cagtttcgacatggacaagataacgcctttgaagcccactctggacaagtactggccgtc 441 | ||||| |||||||||||| ||| ||||| || ||||||||||||||||| Sbjct: 343 ccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagtactggccgtc 402 Query: 442 cctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgggctcatga 501 ||||||||| || ||| || || ||||| || | ||| | |||||||||||| || Sbjct: 403 cctctactgctccaaatctggaacatgcttcagcggcaagggactcttctgggctcacga 462 Query: 502 gtgggagaagcatggaacatgctcggcccctg 533 ||||||||| |||||||| ||||| ||||||| Sbjct: 463 gtgggagaaacatggaacctgctctgcccctg 494
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 38986869 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 38986810 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccgg 298 ||| |||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 38986809 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgg 38986765 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 329 gggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacaccagtttc 388 |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||| Sbjct: 38986444 gggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttc 38986385 Query: 389 gacatggacaag 400 |||||||||||| Sbjct: 38986384 gacatggacaag 38986373 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 411 tgaagcccactctggacaagtactggccgtccctctactgttcgtcctcttccacttgtt 470 ||||||| || || || ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 38986216 tgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgct 38986157 Query: 471 tcagtggtaggggccccttctgggctcatgag 502 ||||||| | ||| |||||||||||||||||| Sbjct: 38986156 tcagtggcaaggggcccttctgggctcatgag 38986125 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 211 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 256 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 38990534 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 38990489 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 ggagccgctccacacgttcacgatcc 326 |||||||||||| ||||||||||||| Sbjct: 38986612 ggagccgctccagacgttcacgatcc 38986587
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 60502 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 60443 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccgg 298 ||| |||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 60442 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgg 60398 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 329 gggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacaccagtttc 388 |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||| Sbjct: 60077 gggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttc 60018 Query: 389 gacatggacaag 400 |||||||||||| Sbjct: 60017 gacatggacaag 60006 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 411 tgaagcccactctggacaagtactggccgtccctctactgttcgtcctcttccacttgtt 470 ||||||| || || || ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 59849 tgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgct 59790 Query: 471 tcagtggtaggggccccttctgggctcatgag 502 ||||||| | ||| |||||||||||||||||| Sbjct: 59789 tcagtggcaaggggcccttctgggctcatgag 59758 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 211 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 256 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 64167 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 64122 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 ggagccgctccacacgttcacgatcc 326 |||||||||||| ||||||||||||| Sbjct: 60245 ggagccgctccagacgttcacgatcc 60220
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 153 bits (77), Expect = 7e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 194 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 253 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4849 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 4790 Query: 254 tgctcctccacccgccactgctgcgccgtcaacggctgctgccgg 298 ||| |||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 4789 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgg 4745 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 329 gggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacaccagtttc 388 |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||| Sbjct: 4424 gggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttc 4365 Query: 389 gacatggacaag 400 |||||||||||| Sbjct: 4364 gacatggacaag 4353 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 411 tgaagcccactctggacaagtactggccgtccctctactgttcgtcctcttccacttgtt 470 ||||||| || || || ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 4196 tgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgct 4137 Query: 471 tcagtggtaggggccccttctgggctcatgag 502 ||||||| | ||| |||||||||||||||||| Sbjct: 4136 tcagtggcaaggggcccttctgggctcatgag 4105 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 211 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 256 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 8514 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 8469 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 ggagccgctccacacgttcacgatcc 326 |||||||||||| ||||||||||||| Sbjct: 4592 ggagccgctccagacgttcacgatcc 4567
>ref|NM_190274.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 211 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 256 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 135 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 180 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 ttcacgatccacgggctgtggccg 340 ||||||||||| |||||||||||| Sbjct: 241 ttcacgatccatgggctgtggccg 264
>dbj|AK106167.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B08, full insert sequence Length = 1177 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 211 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 256 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 196 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 241 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 ttcacgatccacgggctgtggccg 340 ||||||||||| |||||||||||| Sbjct: 302 ttcacgatccatgggctgtggccg 325
>dbj|AK061032.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H06, full insert sequence Length = 1047 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 211 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 256 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 102 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 147 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 ttcacgatccacgggctgtggccg 340 ||||||||||| |||||||||||| Sbjct: 208 ttcacgatccatgggctgtggccg 231
>gb|AF139660.1|AF139660 Calystegia sepium RNase-like protein mRNA, complete cds Length = 981 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Plus Query: 333 tgtggccggactacgatgacgggacttggccgtcgtgctg 372 ||||||| || |||||||| |||||||||||||| ||||| Sbjct: 243 tgtggccagattacgatgatgggacttggccgtcttgctg 282
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 ggcggcctgggcgctggtcgccgccg 143 ||||||| |||||||||||||||||| Sbjct: 3302223 ggcggccagggcgctggtcgccgccg 3302198
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 ccgtcgggaaggagcagcgcg 209 ||||||||||||||||||||| Sbjct: 656857 ccgtcgggaaggagcagcgcg 656837 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ggcgctggtcgccgccggac 146 |||||||||||||||||||| Sbjct: 3069348 ggcgctggtcgccgccggac 3069367
>gb|AC102197.7| Mus musculus chromosome 1, clone RP24-466J11, complete sequence Length = 150253 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cagagggaaagggggagaagg 69 ||||||||||||||||||||| Sbjct: 118960 cagagggaaagggggagaagg 118980
>ref|XM_427412.1| PREDICTED: Gallus gallus similar to cadherin-related neuronal receptor 2 (LOC429857), partial mRNA Length = 1311 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 52 ctgcaggcggcctgggcgctggtcg 76
>ref|XM_414464.1| PREDICTED: Gallus gallus similar to cadherin-related neuronal receptor c02 (LOC416131), mRNA Length = 9674 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 244 ctgcaggcggcctgggcgctggtcg 268
>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence Length = 187517 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 96858 ctgcaggcggcctgggcgctggtcg 96882 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 87797 ctgcaggcggcctgggcgctggtcg 87821 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 78614 ctgcaggcggcctgggcgctggtcg 78638 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 69589 ctgcaggcggcctgggcgctggtcg 69613 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 63166 ctgcaggcggcctgggcgctggtcg 63190 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 53721 ctgcaggcggcctgggcgctggtcg 53745 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 43847 ctgcaggcggcctgggcgctggtcg 43871 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 33461 ctgcaggcggcctgggcgctggtcg 33485 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 24648 ctgcaggcggcctgggcgctggtcg 24672 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 18205 ctgcaggcggcctgggcgctggtcg 18229 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 7844 ctgcaggcggcctgggcgctggtcg 7868 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 52 ctgcaggcggcctgggcgctggtcg 76
>ref|XM_967887.1| PREDICTED: Tribolium castaneum similar to CG3779-PA, isoform A (LOC661741), mRNA Length = 1567 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ctgctgccggaaggagccgct 309 ||||||||||||||||||||| Sbjct: 817 ctgctgccggaaggagccgct 797
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctg 133 ||||||||||||||||||||| Sbjct: 178004 ctgctggcggcctgggcgctg 178024
>gb|AC162880.4| Mus musculus chromosome 1, clone RP24-275N11, complete sequence Length = 164201 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cagagggaaagggggagaagg 69 ||||||||||||||||||||| Sbjct: 6347 cagagggaaagggggagaagg 6367
>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete sequence Length = 229443 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cagagggaaagggggagaagg 69 ||||||||||||||||||||| Sbjct: 127197 cagagggaaagggggagaagg 127217
>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10) Length = 98944 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 18399 ctgcaggcggcctgggcgctggtcg 18423 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 9338 ctgcaggcggcctgggcgctggtcg 9362 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcg 137 |||| |||||||||||||||||||| Sbjct: 155 ctgcaggcggcctgggcgctggtcg 179
>emb|AL772311.19| Mouse DNA sequence from clone RP23-87P16 on chromosome 4, complete sequence Length = 234393 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 gagggaaagggggagaaggag 71 ||||||||||||||||||||| Sbjct: 18483 gagggaaagggggagaaggag 18503
>ref|NM_145071.1| Homo sapiens cytokine inducible SH2-containing protein (CISH), mRNA Length = 2035 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 715 ctgctcctccaccagccactgctg 738
>gb|AY427442.1|AY427440S3 Leishmania amazonensis meta 1 protein gene, complete cds Length = 1905 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agagggaaagggggagaagg 69 |||||||||||||||||||| Sbjct: 1385 agagggaaagggggagaagg 1366
>gb|AC120388.11| Mus musculus chromosome 9, clone RP24-300P2, complete sequence Length = 157596 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ttctgggctcatgagtggga 507 |||||||||||||||||||| Sbjct: 8458 ttctgggctcatgagtggga 8477
>ref|XM_419571.1| PREDICTED: Gallus gallus similar to hypothetical protein DKFZp547N043 (LOC421530), mRNA Length = 1813 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 acttcgcgctggcgctgcag 238 |||||||||||||||||||| Sbjct: 170 acttcgcgctggcgctgcag 189
>gb|AC148244.3| Mus musculus chromosome 9, clone wi1-65440F10, complete sequence Length = 41220 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ttctgggctcatgagtggga 507 |||||||||||||||||||| Sbjct: 6712 ttctgggctcatgagtggga 6693
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tccttcgccccggccgccgt 192 |||||||||||||||||||| Sbjct: 89855 tccttcgccccggccgccgt 89874
>gb|BC064354.1| Homo sapiens cytokine inducible SH2-containing protein, transcript variant 2, mRNA (cDNA clone MGC:75431 IMAGE:4804249), complete cds Length = 1971 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 611 ctgctcctccaccagccactgctg 634
>gb|BC031590.1| Homo sapiens cytokine inducible SH2-containing protein, transcript variant 2, mRNA (cDNA clone MGC:34375 IMAGE:5182644), complete cds Length = 2044 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 706 ctgctcctccaccagccactgctg 729
>gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, complete sequence Length = 179128 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gggaaagggggagaaggaga 72 |||||||||||||||||||| Sbjct: 140265 gggaaagggggagaaggaga 140284
>gb|AY623660.1| Homo sapiens TNF receptor-associated factor 2 (TRAF2) gene, complete cds Length = 43834 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 cgacccacccagcagccagaggga 56 |||||| ||||||||||||||||| Sbjct: 2285 cgaccctcccagcagccagaggga 2262
>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0022L07, complete sequence Length = 142134 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tccttcgccccggccgccgt 192 |||||||||||||||||||| Sbjct: 1633 tccttcgccccggccgccgt 1652
>gb|BC042767.1| Mus musculus RIKEN cDNA 4930473A06 gene, mRNA (cDNA clone IMAGE:4485078), partial cds Length = 950 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gacgtgcctgctggcggcctgggcgctg 133 ||||||| ||||||||||||| |||||| Sbjct: 748 gacgtgcttgctggcggcctgtgcgctg 775
>ref|XM_986746.1| PREDICTED: Mus musculus RIKEN cDNA 4930473A06 gene, transcript variant 2 (4930473A06Rik), mRNA Length = 4525 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gacgtgcctgctggcggcctgggcgctg 133 ||||||| ||||||||||||| |||||| Sbjct: 2505 gacgtgcttgctggcggcctgtgcgctg 2532
>ref|XM_987819.1| PREDICTED: Mus musculus RIKEN cDNA 4930473A06 gene, transcript variant 1 (4930473A06Rik), mRNA Length = 4525 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gacgtgcctgctggcggcctgggcgctg 133 ||||||| ||||||||||||| |||||| Sbjct: 2505 gacgtgcttgctggcggcctgtgcgctg 2532
>ref|XM_001001288.1| PREDICTED: Mus musculus RIKEN cDNA 4930473A06 gene, transcript variant 2 (4930473A06Rik), mRNA Length = 4525 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gacgtgcctgctggcggcctgggcgctg 133 ||||||| ||||||||||||| |||||| Sbjct: 2505 gacgtgcttgctggcggcctgtgcgctg 2532
>gb|AF035946.1| Homo sapiens cytokine-inducible inhibitor of signalling type IV gene, complete cds Length = 3784 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 1839 ctgctcctccaccagccactgctg 1862
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete sequence Length = 196093 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cagagggaaagggggagaaggaga 72 ||||||| |||||||||||||||| Sbjct: 96772 cagaggggaagggggagaaggaga 96749
>gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, complete sequence Length = 157782 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agagggaaagggggagaagg 69 |||||||||||||||||||| Sbjct: 79992 agagggaaagggggagaagg 79973
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 cctgctggcggcctgggcgctggt 135 ||||||||||||||| |||||||| Sbjct: 1971333 cctgctggcggcctgcgcgctggt 1971356
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 cgacccacccagcagccagaggga 56 |||||| ||||||||||||||||| Sbjct: 165642 cgaccctcccagcagccagaggga 165619
>emb|AL031430.2|HS406M12 Human DNA sequence from clone RP3-406M12 on chromosome 1p34.1-34.3 Contains a CpG island, complete sequence Length = 159281 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccagcagccagagggaaagg 60 |||||||||||||||||||| Sbjct: 152265 ccagcagccagagggaaagg 152284
>gb|AC093120.4| Mus musculus Strain C57BL6/J Chromosome 6 BAC, RP23-125A24, Complete Sequence, complete sequence Length = 187794 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cagagggaaagggggagaag 68 |||||||||||||||||||| Sbjct: 120695 cagagggaaagggggagaag 120714
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgctggtcgccgccggactg 148 |||||||||||||||||||| Sbjct: 161405 cgctggtcgccgccggactg 161386
>gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227298 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agagggaaagggggagaagg 69 |||||||||||||||||||| Sbjct: 111741 agagggaaagggggagaagg 111722
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 ctgctggcggcctgggcgctggtcgccg 140 |||||||||| | ||||||||||||||| Sbjct: 202347 ctgctggcggtcggggcgctggtcgccg 202374
>emb|BX936355.7| Mouse DNA sequence from clone RP24-541A1 on chromosome 4 Contains part of a novel gene and the Cbx3-ps3 gene for chromobox homolog 3 (Drosophila HP1 gamma), pseudogene 3, complete sequence Length = 144108 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gacgtgcctgctggcggcctgggcgctg 133 ||||||| ||||||||||||| |||||| Sbjct: 48594 gacgtgcttgctggcggcctgtgcgctg 48621
>gb|AF521878.1| Streptomyces narbonensis desosamine biosynthetic gene cluster, partial sequence Length = 17665 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ggcctgggcgctggtcgccgccgg 144 ||||||||||||| |||||||||| Sbjct: 2841 ggcctgggcgctgctcgccgccgg 2864
>gb|AY013907.1| Misopates orontium isolate B27 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013906.1| Misopates orontium isolate B26 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013905.1| Antirrhinum molle isolate 17 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013904.1| Antirrhinum molle isolate 16 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013903.1| Antirrhinum molle isolate 13 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013902.1| Antirrhinum molle isolate 10 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013901.1| Antirrhinum molle isolate 3 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013900.1| Antirrhinum molle isolate 2 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013899.1| Antirrhinum graniticum isolate B24 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013898.1| Antirrhinum majus subsp. cirrhigerum isolate Gala9 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013897.1| Antirrhinum majus subsp. cirrhigerum isolate Muel7 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 atccacgggctgtggccgga 342 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>emb|CR594144.1| full-length cDNA clone CS0DI031YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1973 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 704 ctgctcctccaccagccactgctg 727
>gb|AC096920.2| Homo sapiens chromosome 3 clone RP11-804H8, complete sequence Length = 192324 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 105755 ctgctcctccaccagccactgctg 105778
>gb|AC025419.42| Homo sapiens 12 BAC RP11-230G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170331 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ccacccagcagccagaggga 56 |||||||||||||||||||| Sbjct: 134950 ccacccagcagccagaggga 134969
>gb|AC015908.10| Homo sapiens chromosome 17, clone RP11-963H4, complete sequence Length = 158693 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agagggaaagggggagaagg 69 |||||||||||||||||||| Sbjct: 153107 agagggaaagggggagaagg 153088
>gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, complete sequence Length = 159838 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 ccacttgtttcagtggtagg 481 |||||||||||||||||||| Sbjct: 121802 ccacttgtttcagtggtagg 121783
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gcccgggcgtccttcgcccc 183 |||||||||||||||||||| Sbjct: 1662221 gcccgggcgtccttcgcccc 1662240
>dbj|AK039282.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330015D16 product:weakly similar to HYPOTHETICAL 71.7 KDA PROTEIN [Macaca fascicularis], full insert sequence Length = 3066 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gacgtgcctgctggcggcctgggcgctg 133 ||||||| ||||||||||||| |||||| Sbjct: 623 gacgtgcttgctggcggcctgtgcgctg 650
>gb|AF035229.1|AF035229 Leishmania amazonensis meta 1 gene, complete cds Length = 1621 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agagggaaagggggagaagg 69 |||||||||||||||||||| Sbjct: 1101 agagggaaagggggagaagg 1082
>gb|AC158186.2| Selaginella moellendorffii clone JGIASXY-5F17, complete sequence Length = 30844 Score = 40.1 bits (20), Expect = 7.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 488 ttctgggctcatgagtgggagaagcatggaacatgctcgg 527 |||||||| || |||||||||||||| || || ||||||| Sbjct: 12388 ttctgggcgcacgagtgggagaagcacgggacgtgctcgg 12427
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tccttcgccccggccgccgt 192 |||||||||||||||||||| Sbjct: 14142300 tccttcgccccggccgccgt 14142319
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgctggtcgccgccggact 147 |||||||||||||||||||| Sbjct: 2020598 gcgctggtcgccgccggact 2020579
>gb|AC027601.25| Homo sapiens chromosome 17, clone RP11-455O6, complete sequence Length = 192732 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cccacccagcagccagaggg 55 |||||||||||||||||||| Sbjct: 155453 cccacccagcagccagaggg 155472
>ref|XM_236275.3| PREDICTED: Rattus norvegicus ataxia telangiectasia mutated homolog (human) (Atm), mRNA Length = 9015 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 caccatctgctcctccacccgcca 270 |||||||| ||||||||||||||| Sbjct: 6006 caccatctcctcctccacccgcca 6029
>gb|AF035947.1|AF035947 Homo sapiens cytokine-inducible inhibitor of signalling type 1b mRNA, complete cds Length = 5043 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 3742 ctgctcctccaccagccactgctg 3765
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cagagggaaagggggagaag 68 |||||||||||||||||||| Sbjct: 84765 cagagggaaagggggagaag 84784
>gb|AY893118.1| Synthetic construct Homo sapiens clone FLH119803.01L cytokine inducible SH2-containing protein (CISH) mRNA, partial cds Length = 777 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 593 ctgctcctccaccagccactgctg 616
>gb|AY890637.1| Synthetic construct Homo sapiens clone FLH119807.01X cytokine inducible SH2-containing protein (CISH) mRNA, complete cds Length = 777 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 593 ctgctcctccaccagccactgctg 616
>gb|AF132297.2|AF132297 Homo sapiens cytokine-inducible SH2-containing protein (G18) mRNA, complete cds Length = 2168 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 872 ctgctcctccaccagccactgctg 895
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 actacttcgcgctggcgctg 235 |||||||||||||||||||| Sbjct: 2923355 actacttcgcgctggcgctg 2923374
>gb|AC138309.4| Mus musculus BAC clone RP23-250M10 from 13, complete sequence Length = 180449 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gggaaagggggagaaggaga 72 |||||||||||||||||||| Sbjct: 77054 gggaaagggggagaaggaga 77073
>gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14 map 4p16, complete sequence Length = 166998 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 ccacttgtttcagtggtagg 481 |||||||||||||||||||| Sbjct: 69076 ccacttgtttcagtggtagg 69057
>gb|U03114.2|SAU03114 Streptomyces albus lipase precursor (lip) and LipR genes, complete cds; and unknown gene Length = 4855 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tccttcgccccggccgccgt 192 |||||||||||||||||||| Sbjct: 2843 tccttcgccccggccgccgt 2824
>dbj|AP000679.7| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-21E14, complete sequence Length = 132641 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ccacccagcagccagaggga 56 |||||||||||||||||||| Sbjct: 56324 ccacccagcagccagaggga 56343
>gb|AF079762.1|AF079762 Streptomyces venezuelae desosamine biosynthetic gene cluster, complete sequence Length = 12441 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ggcctgggcgctggtcgccgccgg 144 ||||||||||||| |||||||||| Sbjct: 1534 ggcctgggcgctgctcgccgccgg 1557
>emb|AL844153.3| Mouse DNA sequence from clone RP24-147L2 on chromosome 4, complete sequence Length = 193917 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 gacgtgcctgctggcggcctgggcgctg 133 ||||||| ||||||||||||| |||||| Sbjct: 72072 gacgtgcttgctggcggcctgtgcgctg 72099
>emb|Z77852.1|HSLUCA2 Human DNA sequence from clone XXcos-2 on chromosome 3, complete sequence Length = 22861 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 3240 ctgctcctccaccagccactgctg 3263
>emb|AL732552.8| Mouse DNA sequence from clone RP23-145O14 on chromosome 4, complete sequence Length = 203332 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 gagggaaagggggagaaggagaca 74 ||||||||||| |||||||||||| Sbjct: 123301 gagggaaagggagagaaggagaca 123278
>dbj|D83532.1| Homo sapiens mRNA for cytokine-inducible SH2-containing protein, complete cds Length = 1742 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctgctcctccacccgccactgctg 276 ||||||||||||| |||||||||| Sbjct: 704 ctgctcctccaccagccactgctg 727 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,884,259 Number of Sequences: 3902068 Number of extensions: 3884259 Number of successful extensions: 86792 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85696 Number of HSP's gapped (non-prelim): 1096 length of query: 541 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 518 effective length of database: 17,143,297,704 effective search space: 8880228210672 effective search space used: 8880228210672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)