>TRI66_HUMAN (O15016) Tripartite motif protein 66|
          Length = 1214

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +1

Query: 10  SPLHSSFYSSPAAVADEPPPPSRGAVDHPRAPGPALHSAQESTDCHRASVPS 165
           S +HS+F S P  ++D P   +  A DHP+A GP+L S       H  +VPS
Sbjct: 703 SLVHSTFQSMPNLISDSPQAMASLASDHPQA-GPSLMSG------HTQAVPS 747

>NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)|
            (NFATc3) (T cell transcription factor NFAT4) (NF-AT4)
            (NFATx)
          Length = 1075

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
 Frame = +1

Query: 13   PLHSSFYSSPAAVADEPPP---PSRGAVDHPRAPGPALHSAQESTDCHRASVPSASRGTV 183
            PL SS  S P +   +P P   PS G    P +P   +HS Q ST          S  + 
Sbjct: 933  PLASSPLSGPPSPQLQPMPYQSPSSGTASSP-SPATRMHSGQHSTQAQSTGQGGLSAPSS 991

Query: 184  *VCSNNCKP 210
             +C + C P
Sbjct: 992  LICHSLCDP 1000

>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)|
            (NFATc3) (T cell transcription factor NFAT4) (NF-AT4)
            (NFATx)
          Length = 1075

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = +1

Query: 13   PLHSSFYSSPAAVADEPPP---PSRGAVDHPRAPGPALHSAQESTDCHRASVPSASRGTV 183
            PL SS  S P++   +P P   PS G    P +P   +HS Q ST          S  + 
Sbjct: 932  PLASSPISGPSSPQLQPMPYQSPSSGTASSP-SPTTRMHSGQHSTQAQSTGQGGLSVPSS 990

Query: 184  *VCSNNCKP 210
             VC + C P
Sbjct: 991  LVCHSLCDP 999

>TLE1_BRARE (O13168) Groucho 1 protein (Fragment)|
          Length = 535

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 34  SSPAAVADEPPPPSRGAVDHPRAPGPALHSAQESTDCHRASVPS 165
           +SPA+VA     PS  A DHP     +    + +T  HR   P+
Sbjct: 59  NSPASVASSGSTPSSKAKDHPHNDKSSTPGLKSNTPTHRNDAPT 102

>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)|
          Length = 705

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 58  EPPPPSRGAVDHPRAPGPALHSAQESTDCHRASVPSA 168
           +PPPP  GA      PGP   +A+ S+    A+ P+A
Sbjct: 29  QPPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAA 65

>IF2_METCA (Q609C0) Translation initiation factor IF-2|
          Length = 868

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 52  ADEPPPPSRGAVDHPRAPGPALHSAQESTD 141
           A EP PP+R +   P+A  P  H A+  T+
Sbjct: 199 APEPRPPARPSAGKPKAEAPRAHPAERETE 228

>LPPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)|
           (Leucine-rich PPR motif-containing protein)
          Length = 1273

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 153 FCTKCLARNRVSLLKQLQTL*AGKTSVDRQVWCW--LKRVRALRRWQTFRNVWKELSE 320
           FC +C+A N+V  L++L  L       DR    +  LK  +    WQ    VW ++ E
Sbjct: 805 FCDRCVANNQVETLEKLVELTQKLFECDRDQMYYNLLKLYKINGDWQRADAVWNKIQE 862

>CSN1_CAEEL (Q9GS00) COP9 signalosome complex subunit 1 (Signalosome subunit 1)|
          Length = 601

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 1   LLLSPLHSSFYSSPAAVADEPPPPSRGAVDHPRAPGPA 114
           LL  P+ +   ++ AA ADEP PP+ G +D    P PA
Sbjct: 5   LLDDPMDTGAPAAEAAAADEPLPPAHG-IDREVTPKPA 41

>SSH2_MOUSE (Q5SW75) Protein phosphatase Slingshot homolog 2 (EC 3.1.3.48) (EC|
            3.1.3.16) (SSH-2L) (mSSH-2L)
          Length = 1423

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 27/89 (30%), Positives = 31/89 (34%)
 Frame = +1

Query: 61   PPPPSRGAVDHPRAPGPALHSAQESTDCHRASVPSASRGTV*VCSNNCKPCKLVKLLWTG 240
            P P S    D P  P P L S Q+  DC   S P  +      CS       L  LL   
Sbjct: 1078 PLPHSSSECDRPADPNPMLSSPQDKGDC--PSTPFKTAAPFVSCSTQGASFSLDYLL--- 1132

Query: 241  RSGVG*NGCVHSEGGKRLGTCGRNFLRPE 327
                  +  VH EG     +   N L PE
Sbjct: 1133 -----PHSVVHLEGCTEQSSATDNELSPE 1156

>INVO_MOUSE (P48997) Involucrin|
          Length = 467

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 305 PHVPKRLPPSECTHPFQPTP---DLPVHRSFTSLQGLQLFEQTHTVPREALG 159
           P+  K LP  +C H  QP P    L V +S   LQ  +L  +   +P+E  G
Sbjct: 62  PNPVKDLPDQKCEHQQQPGPQKQQLQVKKSQQELQEQELHLEKQQLPQEPQG 113

>UCP8_SCHPO (O94685) UBA domain-containing protein 8|
          Length = 884

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +1

Query: 37  SPAAVADEPPPPSRGAVDHPRAPGPALHSAQESTDCHRASVPSA 168
           +PA     PPPP R ++     P P  H A  ST  +  S P +
Sbjct: 737 TPAVKHHPPPPPVRSSISPSMPPAPLTH-ANSSTPMNYVSQPES 779

>Y584_TREPA (O83593) Hypothetical protein TP0584|
          Length = 469

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
 Frame = -1

Query: 251 TPDLPVHRSFTSLQGLQLFE-------QTHTVPREALGTEARWQSVLS 129
           +PD P+H    +L+  QLFE       + HT+ ++  G +  +++V S
Sbjct: 374 SPDTPIHEKLMALKDEQLFELLFKHVAEAHTLVKQLAGLDEYYKTVRS 421


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,099,154
Number of Sequences: 219361
Number of extensions: 1472466
Number of successful extensions: 5956
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5901
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)