>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor|
          Length = 424

 Score =  138 bits (348), Expect = 9e-33
 Identities = 67/140 (47%), Positives = 95/140 (67%)
 Frame = +2

Query: 134 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIRH 313
           +N+T++L  +P +S F+  LTQT LA +IN+RRTITV  V N+ M +L   G TL T+++
Sbjct: 25  HNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYTLSTLKN 84

Query: 314 MLQTHVLVDYYGGKKLHQLAHGVTACSSMFQESGAAPGMSGYVNITQHRGGKVTFTXXXX 493
           +L  HVL+DY+G KKLHQ+  G    +++FQ +GAAPG SG+VNIT  RGGKV F     
Sbjct: 85  ILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVGF---GP 141

Query: 494 XXXXXXXXFVKSVKEIPYDL 553
                   FVKS++E+PY++
Sbjct: 142 DGGDLSSFFVKSIEEVPYNI 161

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score =  122 bits (307), Expect = 5e-28
 Identities = 66/141 (46%), Positives = 90/141 (63%)
 Frame = +2

Query: 131 GYNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIR 310
           G+NIT+IL + PEYS FN  L+QT+LA +IN R TITVLV+ N  M SLA G   L  ++
Sbjct: 25  GHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAMSSLA-GKHPLSVVK 83

Query: 311 HMLQTHVLVDYYGGKKLHQLAHGVTACSSMFQESGAAPGMSGYVNITQHRGGKVTFTXXX 490
           + L   VL+DYY   KLHQL+ G T  ++++Q +G A G  G+VN+T  +GGKV F    
Sbjct: 84  NALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGHALGNLGFVNVTDLKGGKVGF-GSA 142

Query: 491 XXXXXXXXXFVKSVKEIPYDL 553
                    + KSVK+IPY++
Sbjct: 143 APGSKLDSSYTKSVKQIPYNI 163

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score =  121 bits (304), Expect = 1e-27
 Identities = 64/140 (45%), Positives = 90/140 (64%)
 Frame = +2

Query: 134 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIRH 313
           +NIT+IL + P+YS FN  L+QT+LA +IN R TITVLV+ N  M +LAG    L  I+ 
Sbjct: 26  HNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSALAGK-HPLSVIKS 84

Query: 314 MLQTHVLVDYYGGKKLHQLAHGVTACSSMFQESGAAPGMSGYVNITQHRGGKVTFTXXXX 493
            L   VL+DYY  +KLH+++ G T  ++++Q +G APG  G+VNIT  +GGKV F     
Sbjct: 85  ALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKVGF-GSAA 143

Query: 494 XXXXXXXXFVKSVKEIPYDL 553
                   + KSVK+IPY++
Sbjct: 144 SGSKLDSSYTKSVKQIPYNI 163

>RADA_PICTO (Q6L126) DNA repair and recombination protein radA|
          Length = 323

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = +2

Query: 146 KILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIRHMLQT 325
           KI+    +Y+      T   +   +NKR+ I  L   +S++ +L GGG   Q+I     T
Sbjct: 59  KIINAARKYADVGNFETGEEI---LNKRKEIKKLTTGSSNLDNLLGGGLETQSI-----T 110

Query: 326 HVLVDYYGGKK--LHQLAHGVT 385
               ++  GK   +HQLA   T
Sbjct: 111 EFFGEFGSGKTQIMHQLAVNAT 132

>MCRA_METFE (P12971) Methyl-coenzyme M reductase alpha subunit (EC 2.8.4.1)|
           (Coenzyme-B sulfoethylthiotransferase alpha)
          Length = 555

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 329 VLVDYYGGKKLHQLAHGVTACSSMFQESGAAPGMSGY 439
           ++ D++GG +   +A   + CS+ F    A  G+SG+
Sbjct: 395 LMEDHFGGSQRAAIAAAASGCSTAFAAGNAQAGLSGW 431

>FLUG_EMENI (P38094) Protein fluG|
          Length = 865

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 293 TLQTIRHMLQTHVLVDYYGGKKLHQLA 373
           TL ++RH++QTH L+D +    L Q A
Sbjct: 3   TLSSLRHLIQTHPLIDNHAHNLLSQSA 29


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,389,993
Number of Sequences: 219361
Number of extensions: 621927
Number of successful extensions: 1841
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)