ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart35h09 |
|---|---|
| Clone Library Name | barley_pub |
>VATD_ARATH (Q9XGM1) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 261 Score = 209 bits (533), Expect = 3e-54 Identities = 107/146 (73%), Positives = 124/146 (84%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 M+GQ RLNVVPTVTMLGV+KARL+GATRGHALLKKKSDALTVQFRA+LKKIV KESMG Sbjct: 1 MAGQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMG 60 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 + M+ SSF+L E KYVAGD V+HVVL++V+ A+L+VRS EN+AGVKLPKF HF + G Sbjct: 61 DMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSE--GE 118 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 + LTGLARGGQQV ACR A+VKAI Sbjct: 119 TKNDLTGLARGGQQVRACRVAYVKAI 144
>VATD_SUBDO (P57747) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 250 Score = 135 bits (340), Expect = 7e-32 Identities = 76/146 (52%), Positives = 105/146 (71%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ R+NV P+ L ++KARL GA +GH+LLK+K+DALT++FR IL KI+ TK MG Sbjct: 1 MSGK-DRINVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 E M+ ++FSLAEAK+VAGD +VLQ+V A +R+ + ++NVAGV LP F + D G+ Sbjct: 60 EVMKEATFSLAEAKFVAGD-FSEMVLQNVDKAKIRLHTKKDNVAGVTLPVFETYSD--GS 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 + LTGL+RGGQ VS C+ KA+ Sbjct: 117 DTYELTGLSRGGQLVSKCKEVFGKAV 142
>VATD_PONPY (Q5RCS8) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 247 Score = 130 bits (328), Expect = 2e-30 Identities = 73/146 (50%), Positives = 101/146 (69%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 S LTGLARGG+Q++ + + KA+ Sbjct: 117 DSYELTGLARGGEQLAKLKRNYAKAV 142
>VATD_MOUSE (P57746) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 130 bits (328), Expect = 2e-30 Identities = 73/146 (50%), Positives = 101/146 (69%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 S LTGLARGG+Q++ + + KA+ Sbjct: 117 DSYELTGLARGGEQLAKLKRNYAKAV 142
>VATD_HUMAN (Q9Y5K8) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 130 bits (328), Expect = 2e-30 Identities = 73/146 (50%), Positives = 101/146 (69%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 S LTGLARGG+Q++ + + KA+ Sbjct: 117 DSYELTGLARGGEQLAKLKRNYAKAV 142
>VATD_BOVIN (P39942) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 130 bits (328), Expect = 2e-30 Identities = 73/146 (50%), Positives = 101/146 (69%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 E MR ++FSLAEAK+ AGD V+Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 S LTGLARGG+Q++ + + KA+ Sbjct: 117 DSYELTGLARGGEQLAKLKRNYAKAV 142
>VATD_RABIT (O97755) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) (V-ATPase 28 kDa accessory protein) Length = 247 Score = 129 bits (324), Expect = 5e-30 Identities = 72/146 (49%), Positives = 100/146 (68%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ R+ + P+ ++KARL GA G LLKKKSDALT++FR ILKKI+ TK MG Sbjct: 1 MSGK-DRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 E MR ++FSLAEAK+ AGD +Q+V A +++R+ ++NVAGV LP F H+ + G Sbjct: 60 EVMREAAFSLAEAKFTAGD-FSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHE--GT 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 S LTGLARGG+Q++ + + KA+ Sbjct: 117 DSYELTGLARGGEQLAKLKRNYAKAV 142
>VATD1_DROME (Q9V7D2) Vacuolar ATP synthase subunit D 1 (EC 3.6.3.14) (V-ATPase| D subunit 1) (Vacuolar proton pump D subunit 1) (dV-ATPase D) Length = 246 Score = 125 bits (313), Expect = 1e-28 Identities = 69/146 (47%), Positives = 101/146 (69%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ RL + P+ ++KARL GA +GH LLKKK+DAL ++FR IL KI+ TK MG Sbjct: 1 MSGK-DRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 + M+ ++FSLAEAK+ +GD + VVLQ+V A +++R+ ++NVAGV LP F + D G+ Sbjct: 60 DVMKEAAFSLAEAKFTSGD-INQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQD--GS 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 + L GLARGGQQ++ + + A+ Sbjct: 117 DTYELAGLARGGQQLAKLKKNYQSAV 142
>VATD_NEUCR (O59941) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 264 Score = 124 bits (312), Expect = 1e-28 Identities = 65/146 (44%), Positives = 91/146 (62%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG R V PT LG++KA+L GA GH+LLK+KS+ALT +FR I ++I K MG Sbjct: 1 MSGAADREAVFPTRQSLGIMKAKLKGAETGHSLLKRKSEALTKRFREITRRIDEAKRKMG 60 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 M+ +S SLAE Y G + + + +S +SA R+R+ QENV+GV LP F + G Sbjct: 61 RVMQIASLSLAEVTYAVGGNIGYQIQESAKSARFRIRAKQENVSGVLLPAFEAY-QAEGN 119 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 ++TGL +GGQQV CR + +A+ Sbjct: 120 DDFAMTGLGKGGQQVQRCRETYARAV 145
>VATD_MANSE (Q9U0S4) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 246 Score = 124 bits (311), Expect = 2e-28 Identities = 71/146 (48%), Positives = 97/146 (66%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG+ RL + P+ ++K RL GA +GH LLKKK+DAL V+FR IL KI+ TK MG Sbjct: 1 MSGK-DRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMG 59 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 E M+ ++FSLAEAK+ GD VVLQ+V A +++RS ++NVAGV LP F + D G+ Sbjct: 60 EVMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQD--GS 116 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 + L GLARGGQQ++ + A+ Sbjct: 117 DTYELAGLARGGQQLAKLKKNFQSAV 142
>VATD2_DROME (Q9NEF6) Probable vacuolar ATP synthase subunit D 2 (EC 3.6.3.14)| (V-ATPase D subunit 2) (Vacuolar proton pump D subunit 2) Length = 249 Score = 122 bits (306), Expect = 6e-28 Identities = 64/140 (45%), Positives = 95/140 (67%) Frame = +3 Query: 120 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 299 RL + P+ ++K+RL GAT+GH LLKKK+DAL ++FR IL KI+ TK MG+ M+ + Sbjct: 6 RLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEA 65 Query: 300 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASSPSLT 479 +FSLAE K+ GD + +VLQ+V A +++R+ ++NVAGV LP F + D G + L Sbjct: 66 AFSLAEVKFTTGD-INQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTD--GVDTYELA 122 Query: 480 GLARGGQQVSACRAAHVKAI 539 GLARGGQQ++ + + A+ Sbjct: 123 GLARGGQQLAKLKKNYQSAV 142
>VATD_CANAL (P87220) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 267 Score = 120 bits (302), Expect = 2e-27 Identities = 66/146 (45%), Positives = 93/146 (63%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG R V PT LGV+K++L GA +GH+LLK+KS+ALT +FR I ++I K MG Sbjct: 1 MSGAGNREQVFPTRMTLGVMKSKLKGAQQGHSLLKRKSEALTKRFRDITQRIDDAKRKMG 60 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 M+ ++FSLAE +Y GD + + V +SV+ A V++ QENV+GV LP F ++ Sbjct: 61 RVMQTAAFSLAEVQYATGDNISYQVQESVQKARFTVKAKQENVSGVFLPTFDSHIN-EDV 119 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 + LT LARGGQQV + + KA+ Sbjct: 120 NDFKLTALARGGQQVQKAKLIYSKAV 145
>VATD_YEAST (P32610) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 256 Score = 119 bits (298), Expect = 5e-27 Identities = 64/146 (43%), Positives = 96/146 (65%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 MSG ++ V PT LG++K +L GA +G++LLK+KS+ALT +FR I K+I K+ MG Sbjct: 1 MSGNREQ--VFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMG 58 Query: 282 EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 M+ ++FSLAE Y G+ + + V +SV +A +VR+ QENV+GV L +F ++DP Sbjct: 59 RVMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPE-I 117 Query: 462 SSPSLTGLARGGQQVSACRAAHVKAI 539 + LTGL RGGQQV + + +A+ Sbjct: 118 NDFRLTGLGRGGQQVQRAKEIYSRAV 143
>VATD_CAEEL (P34462) Probable vacuolar ATP synthase subunit D (EC 3.6.3.14)| (V-ATPase D subunit) (Vacuolar proton pump D subunit) Length = 257 Score = 119 bits (297), Expect = 7e-27 Identities = 68/144 (47%), Positives = 92/144 (63%) Frame = +3 Query: 108 GQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEA 287 G R+ V P+ ++K RL GA +GH+LLKKK+DAL ++FR IL+KIV K MGE Sbjct: 4 GGKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEV 63 Query: 288 MRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASS 467 M+ ++FSLAEAK+ AGD H V+Q+V A RVR +ENV GV LP F + D G + Sbjct: 64 MKEAAFSLAEAKFTAGD-FSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQD--GPDA 120 Query: 468 PSLTGLARGGQQVSACRAAHVKAI 539 LTGL +GG ++ + + KAI Sbjct: 121 YDLTGLGKGGANIARLKKNYNKAI 144
>VATD_SCHPO (O59823) Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D| subunit) (Vacuolar proton pump D subunit) Length = 285 Score = 113 bits (282), Expect = 4e-25 Identities = 62/141 (43%), Positives = 86/141 (60%) Frame = +3 Query: 117 QRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRA 296 QR NV PT L +K RL GA GH+LLK+KS+AL +FR I+ I K+ MG M+ Sbjct: 5 QRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGRVMQI 64 Query: 297 SSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGASSPSL 476 ++FS+AE + G+ + + QSV+ LRVRS QEN++GV LP F +D + L Sbjct: 65 AAFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEMNLDES-IDDFQL 123 Query: 477 TGLARGGQQVSACRAAHVKAI 539 TGL +GGQQ+ R + KA+ Sbjct: 124 TGLGKGGQQIQKARQVYEKAV 144
>VATD_PYRKO (Q5JIR1) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 47.0 bits (110), Expect = 3e-05 Identities = 34/102 (33%), Positives = 50/102 (49%) Frame = +3 Query: 123 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 302 LNV PT L +K R+ A +GH LLK K DAL ++F I + + +E + E M + Sbjct: 5 LNVKPTRMELLNLKRRITLAKKGHKLLKDKQDALVMEFFTIYDEALRLREELNEKMMEAF 64 Query: 303 FSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 428 +L A+ G + SV+ + V NV GV +P Sbjct: 65 KALQRAEIDVGTLRMKEISLSVK-PNREVEVKTRNVMGVPVP 105
>NTPD_ENTHR (P43435) V-type sodium ATP synthase subunit D (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit D) Length = 230 Score = 44.7 bits (104), Expect = 2e-04 Identities = 30/103 (29%), Positives = 54/103 (52%) Frame = +3 Query: 120 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 299 RLNV PT L +K +L ATRGH LLK K D L QF +++K ++++ + + + Sbjct: 2 RLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTA 61 Query: 300 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 428 AK + +L ++ + ++ + ++N+ VK+P Sbjct: 62 MKDFVLAKSTVEEAFIDELL-ALPAENVSISVVEKNIMSVKVP 103
>VATD_STRP8 (Q8P2U4) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 44.3 bits (103), Expect = 2e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 120 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 299 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTLEKELAAN 62 Query: 300 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 434 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_STRP6 (Q5XE48) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 44.3 bits (103), Expect = 2e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 120 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 299 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTLEKELAAN 62 Query: 300 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 434 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_STRP3 (Q8K8T0) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 43.9 bits (102), Expect = 3e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 120 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 299 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTIEKELAAN 62 Query: 300 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 434 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_STRP1 (Q9A1Q1) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 208 Score = 43.9 bits (102), Expect = 3e-04 Identities = 33/105 (31%), Positives = 54/105 (51%) Frame = +3 Query: 120 RLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRAS 299 RLNV PT L +K RL ATRGH LLK K D L +F ++++ ++++ + + A+ Sbjct: 3 RLNVKPTRMELSNLKNRLKTATRGHKLLKDKRDELMRRFVDLIRENNELRQTIEKELAAN 62 Query: 300 SFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 434 AK + + + L +V + + EN+ V +PKF Sbjct: 63 MKEFVLAK-ASENSLMVEELFAVPVHEVTLWIDIENIMSVNVPKF 106
>VATD_DEIRA (Q9RWG6) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 224 Score = 43.9 bits (102), Expect = 3e-04 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 1/111 (0%) Frame = +3 Query: 102 MSGQTQRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMG 281 M+GQ + PT + L KA L A G LLK+K DAL +F A++K +A +E + Sbjct: 1 MAGQ-----ISPTRSALLASKASLKTANGGADLLKRKRDALIGEFFALVKDALAAREQLS 55 Query: 282 EAMRASSFSLAEAKYVAGDGVRHV-VLQSVRSASLRVRSHQENVAGVKLPK 431 + + SL AK A D V L + V E++ GVK+PK Sbjct: 56 SVSKGAYTSLFGAK--AWDSPEAVESLSLAGTGDYAVDMQIESIYGVKVPK 104
>VATD_ARCFU (O29099) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 209 Score = 43.5 bits (101), Expect = 4e-04 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Frame = +3 Query: 129 VVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFS 308 V PT L ++ R+ ATRGHALLK K D L ++FR +L++ M + + Sbjct: 4 VQPTRMELIKLRRRIKMATRGHALLKMKRDGLIMEFRQLLEEAKEVIGGMVQKYEKAQSK 63 Query: 309 LAEAKYVAGDGVRHVVLQSVRSASLRV----RSHQENVAGVKLP 428 LA A +A DG+ V ++S+ + ++ ++N+ GV +P Sbjct: 64 LALA--IAVDGI--VAVRSIALSCCQIPPEFSMKRKNIMGVVVP 103
>VATD_METKA (Q8TUS9) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 232 Score = 42.7 bits (99), Expect = 6e-04 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 1/113 (0%) Frame = +3 Query: 126 NVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSF 305 +V PT L ++ R+ A +GH LLK+K DAL ++F ++K+ +E + + + Sbjct: 8 DVNPTRMELLKLQDRIELAKKGHKLLKEKRDALIMEFFEMVKRASEIREQAVKKLMEAYS 67 Query: 306 SLAEAKYVAGD-GVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAGA 461 LA AK G+ GV + + ++V NV GV +P + G+ Sbjct: 68 KLAAAKVTVGEIGVERASMAT--GEEIKVDVGSRNVMGVVVPIIERVSEDGGS 118
>VATD_PYRFU (Q8U4A4) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 42.7 bits (99), Expect = 6e-04 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 4/106 (3%) Frame = +3 Query: 123 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATK----ESMGEAM 290 L V PT L +K R+ A RGH LLK+K DAL ++F I + ++ + + +GEA Sbjct: 5 LKVKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSMRRELIKKIGEAF 64 Query: 291 RASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 428 A + E V ++ + + + + VRS N+ GV++P Sbjct: 65 EALRLAQVE---VGSVRLKEIAIGVNPNKEIEVRS--RNIMGVRVP 105
>VATD_METJA (Q58032) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 216 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/106 (28%), Positives = 53/106 (50%) Frame = +3 Query: 117 QRLNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRA 296 QR+N PT L +K ++ A +GH LLK+K DAL ++F I+++ ++ + + Sbjct: 2 QRVN--PTRMELLKLKNKIKLAEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAE 59 Query: 297 SSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKF 434 + L A+ V G + ++ L V +N+ GV +P F Sbjct: 60 AYKDLIMAQTVMGTLAVKEAALAAKNDKLEVDMDTKNIMGVTVPTF 105
>VATD_PYRAB (Q9UXU9) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Frame = +3 Query: 123 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 302 L + PT L +K R+ A RGH LLK+K DAL ++F I + ++ + + + M + Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64 Query: 303 FSLAEAKYVAGD-GVRHVVLQSVRSASLRVRSHQENVAGVKLP 428 +L A+ G ++ + + + + +R+ N+ GV++P Sbjct: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRT--RNIMGVRVP 105
>VATD_PYRHO (O57731) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Frame = +3 Query: 123 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 302 L + PT L +K R+ A RGH LLK+K DAL ++F I + ++ + + M + Sbjct: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIRKMEEAF 64 Query: 303 FSLAEAKYVAGD-GVRHVVLQSVRSASLRVRSHQENVAGVKLP 428 SL A+ G ++ + + + + +++ N+ GV++P Sbjct: 65 NSLRRAQVDVGALRLKEIAIGVKPNKEIEIKT--RNIMGVRVP 105
>VATD_DESSY (O06506) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 214 Score = 40.0 bits (92), Expect = 0.004 Identities = 31/102 (30%), Positives = 49/102 (48%) Frame = +3 Query: 123 LNVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASS 302 LNV PT L +K R+ A +GH LLK K DAL ++F I + + + + M+ + Sbjct: 5 LNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALVMEFFTIYDEALQLRRELNLKMKEAF 64 Query: 303 FSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLP 428 +L A+ G + SV+ + V + NV V +P Sbjct: 65 EALQMAEIDVGTLRLKEISLSVK-PNREVEIRKRNVMAVPVP 105
>VATD_METMA (Q60188) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 209 Score = 38.9 bits (89), Expect = 0.009 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Frame = +3 Query: 126 NVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSF 305 +V PT + L +K ++ + GH LLK K D L ++F IL + + + A S+ Sbjct: 5 DVKPTRSELINLKKKIKLSESGHKLLKMKRDGLILEFFKILNEARNVRTELDAAFAKSTE 64 Query: 306 SLAEAKYVAG-DGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFT 437 + A V G VR + S +++ H N+ GV +PK + Sbjct: 65 KINLASAVNGMVAVRSTAFTAKESPEIQLSGH--NIMGVVVPKIS 107
>VATD_THET8 (O87880) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 223 Score = 37.4 bits (85), Expect = 0.027 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Frame = +3 Query: 129 VVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFS 308 V PT L + +L A +G LLKKK DAL +F ++++ + ++++ +A + + + Sbjct: 4 VSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAA 63 Query: 309 LAEAKYVAGDGVRHVVLQSVRSASLR-VRSHQENVAGVKLPK 431 L A+ A DG V ++ L V + ENV G K+P+ Sbjct: 64 LLLAQ--AFDGPEVVAGAALGVPPLEGVEAEVENVWGSKVPR 103
>VATD_METAC (Q8TII9) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase| subunit D) Length = 209 Score = 35.8 bits (81), Expect = 0.079 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Frame = +3 Query: 126 NVVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSF 305 +V PT + L +K ++ + GH LLK K D L ++F IL + + + A S+ Sbjct: 5 DVKPTRSELINLKKKIKLSESGHKLLKMKRDGLILEFFKILNEARNVRTELDAAYEKSTE 64 Query: 306 SLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQE------NVAGVKLPKFT 437 + A V G + +V+S + + + E N+ GV +PK + Sbjct: 65 KINLASAVNG-------MVAVKSTAFTAKEYPEIQLSGHNIMGVVVPKIS 107
>CHEB2_RHOPA (P62644) Chemotaxis response regulator protein-glutamate| methylesterase of group 2 operon (EC 3.1.1.61) Length = 391 Score = 32.7 bits (73), Expect = 0.67 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 10/126 (7%) Frame = +3 Query: 129 VVPTVTMLGVVKARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFS 308 V P V +L + L G + LL KK D + + + ++ + + S Sbjct: 63 VKPDVAVLDIEMPELDGISALPQLLAKKRDLVVIMASTLTRR--------NAEISFKALS 114 Query: 309 LAEAKYV----------AGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAG 458 L A Y+ A D +H +LQ +RS RVR + V GV P PA Sbjct: 115 LGAADYIPKPETTREPQAADIFKHDLLQKIRSLGGRVR--RRAVPGVAAPAIAREPHPAP 172 Query: 459 ASSPSL 476 P++ Sbjct: 173 LPHPAV 178
>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)| (Episialin) Length = 630 Score = 32.3 bits (72), Expect = 0.87 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 14/133 (10%) Frame = -1 Query: 460 APAGSTKW--VNLGSLTPATFSWWERTRSEAERTDWSTTWRTPSPATYLASASEKEEARM 287 AP ST V+ G+ +PAT + T S + S R P +T A S Sbjct: 141 APVDSTSSPVVHGGTSSPATSPPGDSTSSPDHSSTSSPATRAPEDSTSTAVLSGTSSPAT 200 Query: 286 ASPMDSLVATIFLRMARNCTVSASDFFLSS-------ACPRVAPIRRAFTTP-----SIV 143 +P+DS + + + S S+ SS + P +P+R + ++P SI Sbjct: 201 TAPVDSTSSPVAHDDTSSPATSLSEDSASSPVAHGGTSSPATSPLRDSTSSPVHSSASIQ 260 Query: 142 TVGTTFSLCVCPD 104 + TT L PD Sbjct: 261 NIKTTSDLASTPD 273
>GLYA_NATPD (Q3IRX5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 424 Score = 32.0 bits (71), Expect = 1.1 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%) Frame = +3 Query: 216 DALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGVRHVVLQSVRSA----SL 383 +AL +F ++++ E++GE ++ FSL V+G H+VL +R + S Sbjct: 274 EALQPEFEQYAQQVIDNAEALGERLQEHGFSL-----VSGGTDNHLVLVDLRESHPDTSG 328 Query: 384 RVRSHQENVAGVKLPKFT------HFVDPAG--ASSPSLTGLARGGQQVSACRAAHVKA 536 V AG+ L K T +P+G A +P+LT RG + + R A + A Sbjct: 329 TVAEEALEAAGIVLNKNTVPGETRSAFNPSGIRAGTPALT--TRGFDEQACERVADIIA 385
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 30.8 bits (68), Expect = 2.5 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Frame = -1 Query: 382 SEAERTDWSTTWRTPSPATYLASASEKEEARMASPMDSLVATIFLRMARN------CTVS 221 S + T STT+ T SP+T +S + + ASP+ S + ++ L+ + +V Sbjct: 276 SSSNTTPTSTTFTTTSPSTAPSSTTVTYTSTTASPITSTITSVNLQTSLKYSVITVTSVH 335 Query: 220 ASDFFLSSACPRVAPIRRAFTTPSIVTVGTT 128 D +S R +++ T T+G T Sbjct: 336 TMDTNISEITSRYLTMKKVITQIYSSTLGAT 366
>SHH_CHICK (Q91035) Sonic hedgehog protein precursor (SHH) [Contains: Sonic| hedgehog protein N-product; Sonic hedgehog protein C-product] Length = 425 Score = 30.4 bits (67), Expect = 3.3 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +3 Query: 261 ATKESMGEAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLR 386 AT + G+A+ AS+ + YV G+G + ++ SV S SLR Sbjct: 286 ATGSTSGQALFASNVKPGQRVYVLGEGGQQLLPASVHSVSLR 327
>SYE1_BRUME (Q8YHG4) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA| ligase 1) (GluRS 1) Length = 473 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +3 Query: 165 ARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGV 344 A+ I A+R AL +K + L + RA+LK + E+MGE A S A + +G+ Sbjct: 372 AKFIFASRPLALDEKAASLLNDEGRAVLKPVYPVLEAMGE-WTAESLDAAIRAHAEAEGL 430 Query: 345 R-HVVLQSVRSA 377 + + Q +R+A Sbjct: 431 KLGKIAQPLRAA 442
>ATPX_RHORU (P15015) ATP synthase B' chain (EC 3.6.3.14) (Subunit II)| Length = 161 Score = 30.4 bits (67), Expect = 3.3 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Frame = +3 Query: 246 LKKIVATKESMGEAMRASSFSLAEAKYVAGDGVRHVVLQSVRSA-----------SLRVR 392 LK+ A K A+ A +LAEA+ A D +R V + ++A + R++ Sbjct: 50 LKQAEALKAETEAAIAAYETALAEARARAHDEIRAVTEAAAKAAEARNAEVAKALNTRIK 109 Query: 393 SHQENVAGVKLPKFTHFVDPAGASSPSLTGLARGGQQVSACRAAHVKA 536 + + + TH + AGA + + G G + A A V A Sbjct: 110 DGEARIVQARDEALTHVREVAGAVASDIVGKLAGLRVDDAALTAAVAA 157
>Y6389_RHOBA (Q7UQD2) UPF0365 protein RB6389| Length = 362 Score = 30.4 bits (67), Expect = 3.3 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 15/118 (12%) Frame = +3 Query: 228 VQFRAILK-KIVATKESMGEAMRASSFSLAEAKYVAGDGVRHVV-----LQSVRSASLRV 389 V RAI++ KI+AT+ + + + EA Y+AG V+ V+ + ++ SL Sbjct: 74 VNTRAIVRSKIMATQAGLDDP--ELTVGALEAHYLAGGNVQQVIRALIAAKKAKTISLTF 131 Query: 390 R-------SHQENVAGVKLPKFTHFVD--PAGASSPSLTGLARGGQQVSACRAAHVKA 536 R + ++ + V+ + +D P G++ PSL +A+ G Q+ V+A Sbjct: 132 REATAIDLAGRDVLESVQTSVYPKVIDCPPRGSAKPSLDAVAKDGIQLKVRARVTVRA 189
>SYE1_BRUSU (Q8G0E8) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA| ligase 1) (GluRS 1) Length = 473 Score = 28.9 bits (63), Expect = 9.6 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +3 Query: 165 ARLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGV 344 A+ I A+R AL +K + L + RA+LK + E++GE A S A + +G+ Sbjct: 372 AKFIFASRPLALDEKAASLLNDEGRAVLKPVYPVLEAVGE-WTAESLDAAIRAHAEAEGL 430 Query: 345 R-HVVLQSVRSA 377 + + Q +R+A Sbjct: 431 KLGKIAQPLRAA 442
>LRC45_MOUSE (Q8CIM1) Leucine-rich repeat-containing protein 45| Length = 670 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 168 RLIGATRGHALLKKKSDALTVQFRAILKKIVATKESMGEAMRASSFSLAEAKYVAGDGVR 347 ++IG+ ALL ++S+ +++ + LK+ ++ EA RAS A YV G +R Sbjct: 605 KVIGSEHREALLDRESENASLREKLRLKEAEISRIRDEEAQRASFLQNAVLAYVQGSPLR 664 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,968,099 Number of Sequences: 219361 Number of extensions: 597829 Number of successful extensions: 2711 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2682 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
