>FAM5B_PONPY (Q5RDR5) Protein FAM5B precursor|
          Length = 783

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 1   HRTERIDLPKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117
           HR  R  LPK RS+  WW+  ++     YC  S  PG F
Sbjct: 401 HRQPRFRLPKERSLSYWWNRIQSL---LYCGESTFPGTF 436

>FAM5B_HUMAN (Q9C0B6) Protein FAM5B precursor (BMP/retinoic acid-inducible|
           neural-specific protein 2) (DBCCR1-like protein 2)
          Length = 783

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 1   HRTERIDLPKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117
           HR  R  LPK RS+  WW+  ++     YC  S  PG F
Sbjct: 401 HRQPRFRLPKERSLSYWWNRIQSL---LYCGESTFPGTF 436

>FAM5B_RAT (Q8K1M8) Protein FAM5B precursor (BMP/retinoic acid-inducible|
           neural-specific protein 2)
          Length = 783

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 1   HRTERIDLPKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117
           HR  R  LPK RS+  WW+  ++     YC  S  PG F
Sbjct: 401 HRQPRFRLPKERSLSFWWNRIQSL---LYCGESTFPGTF 436

>FAM5B_MOUSE (Q6DFY8) Protein FAM5B precursor|
          Length = 783

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 1   HRTERIDLPKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117
           HR  R  LPK RS+  WW+  ++     YC  S  PG F
Sbjct: 401 HRQPRFRLPKERSLSFWWNRIQSL---LYCGESTFPGTF 436

>NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) (NAC2)|
           (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP)
          Length = 268

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 150 FEYPPNRSQMNGTRVTGAHAIPYWKATGPVEYVESGT 260
           F  P  R   NG R   A    YWKATG  + + SG+
Sbjct: 67  FFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGS 103

>NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067)|
          Length = 276

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 150 FEYPPNRSQMNGTRVTGAHAIPYWKATG 233
           F  P +R   NG+R   A A  YWKATG
Sbjct: 75  FFTPRDRKYPNGSRPNRAAASGYWKATG 102

>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -1

Query: 160 GYSKLPFSSGPSTSGTARAAVKASNSSAATQ---RAPLTTIDRSIS 32
           G S  PF SGP+      AA  A +S + +      PL TI  S S
Sbjct: 423 GLSASPFESGPAVGAAGAAAEAAEHSGSGSDSYPEGPLATIPESDS 468

>STE7_SCHPO (Q10136) Protein ste7|
          Length = 569

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = -1

Query: 205 CAPVTLVPFICDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISAW 26
           C+P   V F+ +L  G  KL F   P+        V+ SN  +   +   TT+  S S+ 
Sbjct: 411 CSPDNNVTFV-NLAPG-EKLTFKIEPNDLMDEEEVVENSNMYSIPGKTVATTVCHSSSSS 468

Query: 25  EDRSALSC 2
            D SALSC
Sbjct: 469 GDFSALSC 476

>LHX9_MOUSE (Q9WUH2) LIM/homeobox protein Lhx9|
          Length = 388

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 135 LLNGNFEYPPNRSQMNGTRVTGAHAIPYWKATGPVE 242
           LL G  EYPP  S       +G  A+PY+  TG V+
Sbjct: 181 LLQG--EYPPQLSYTELAAKSGGLALPYFNGTGTVQ 214

>LHX9_HUMAN (Q9NQ69) LIM/homeobox protein Lhx9|
          Length = 388

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 135 LLNGNFEYPPNRSQMNGTRVTGAHAIPYWKATGPVE 242
           LL G  EYPP  S       +G  A+PY+  TG V+
Sbjct: 181 LLQG--EYPPQLSYTELAAKSGGLALPYFNGTGTVQ 214

>FIBP_ADE12 (P36711) Fiber protein (pIV)|
          Length = 587

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = -1

Query: 139 SSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSIS 32
           S G   S +A  AVKAS  +  T RAPLTT D S++
Sbjct: 100 SQGLKLSWSAPLAVKASALTLNT-RAPLTTTDESLA 134

>TRUA_XANAC (Q8PJ25) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 257

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 197 RHPRAVHLRPVGRVLEVAVQQRA 129
           RH +A+H++ +G V+EV VQ  A
Sbjct: 169 RHLQAIHVQRIGEVVEVQVQANA 191

>TRUA_DEIRA (Q9RS37) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 280

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 166 LGGYSKL-PFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISAW 26
           LGG   L P S+G + +G    A+        T R PL  + R+++AW
Sbjct: 52  LGGEGALRPVSAGRTDAGVHAEAMPLHWDVPTTFRVPLVQLPRALNAW 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,041,715
Number of Sequences: 219361
Number of extensions: 660250
Number of successful extensions: 3455
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3455
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)