ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart35h02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 54 ctcaaggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcacc 113 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 13654 ctcaaggccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 13713 Query: 114 gccgtccc 121 |||||||| Sbjct: 13714 gccgtccc 13721 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 262 cggccgcggagacggtgggcttcttccaggtggtgaaccacggcgtgcc 310 |||| |||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 13856 cggcggcggagtcggtgggcttcttccaggtggtcaaccacggcgtgcc 13904 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 327 gggatgctcgcggcgttgcggagcttcaacgaggagccggcgg 369 ||||||||||||||| ||||| | ||||||||| |||||||| Sbjct: 13921 gggatgctcgcggcggtgcggcggttcaacgagcggccggcgg 13963 Score = 40.1 bits (20), Expect = 8.2 Identities = 44/52 (84%) Strand = Plus / Plus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttc 476 |||||||||||| ||| |||| | || |||| |||||||||||| |||||| Sbjct: 14022 caacttcgacctgttcgagtcccccgccgccaactggcgcgacacgctcttc 14073
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 54 ctcaaggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcacc 113 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 27290741 ctcaaggccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 27290682 Query: 114 gccgtccc 121 |||||||| Sbjct: 27290681 gccgtccc 27290674 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 |||||||||||||||| ||||||||||| || |||||||| || || |||||||| || Sbjct: 36014570 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 36014629 Query: 118 tccccgcaatctttcaccacc 138 ||||||| ||||| ||||||| Sbjct: 36014630 tccccgccatcttccaccacc 36014650 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 262 cggccgcggagacggtgggcttcttccaggtggtgaaccacggcgtgcc 310 |||| |||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 27290539 cggcggcggagtcggtgggcttcttccaggtggtcaaccacggcgtgcc 27290491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 507 gaggagatcccgccggcgtgcaggcgtgtggcgccggagtacgtggggctagtgcaacgg 566 ||||||||||| |||||||||||| | |||| | ||||||||||| | ||||| || Sbjct: 36015001 gaggagatcccaccggcgtgcaggggcgtggtgggggagtacgtggaggcggtgcagagg 36015060 Query: 567 ctgggccgcacgctcttcgagctgctgtcggaggcg 602 |||||| | |||| || |||||||||||||||||| Sbjct: 36015061 ctgggcggggcgctgttggagctgctgtcggaggcg 36015096 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 276 gtgggcttcttccaggtggtgaaccacggc 305 ||||| |||||||||||||||||||||||| Sbjct: 36014767 gtggggttcttccaggtggtgaaccacggc 36014796 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggagg 372 |||||| |||||| ||||| | ||||||||| |||||||||||| Sbjct: 36014820 gatgctggcggcggtgcggcggttcaacgagcagccggcggagg 36014863 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgtgc 309 |||||||||| ||||||||||||||||| Sbjct: 10015798 ttcttccaggcggtgaaccacggcgtgc 10015771 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 327 gggatgctcgcggcgttgcggagcttcaacgaggagccggcgg 369 ||||||||||||||| ||||| | ||||||||| |||||||| Sbjct: 27290474 gggatgctcgcggcggtgcggcggttcaacgagcggccggcgg 27290432 Score = 40.1 bits (20), Expect = 8.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttc 476 |||||||||||| ||| |||| | || |||| |||||||||||| |||||| Sbjct: 27290373 caacttcgacctgttcgagtcccccgccgccaactggcgcgacacgctcttc 27290322
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 54 ctcaaggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcacc 113 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 27382064 ctcaaggccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 27382005 Query: 114 gccgtccc 121 |||||||| Sbjct: 27382004 gccgtccc 27381997 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 |||||||||||||||| ||||||||||| || |||||||| || || |||||||| || Sbjct: 36104644 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 36104703 Query: 118 tccccgcaatctttcaccacc 138 ||||||| ||||| ||||||| Sbjct: 36104704 tccccgccatcttccaccacc 36104724 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 262 cggccgcggagacggtgggcttcttccaggtggtgaaccacggcgtgcc 310 |||| |||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 27381862 cggcggcggagtcggtgggcttcttccaggtggtcaaccacggcgtgcc 27381814 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 507 gaggagatcccgccggcgtgcaggcgtgtggcgccggagtacgtggggctagtgcaacgg 566 ||||||||||| |||||||||||| | |||| | ||||||||||| | ||||| || Sbjct: 36105075 gaggagatcccaccggcgtgcaggggcgtggtgggggagtacgtggaggcggtgcagagg 36105134 Query: 567 ctgggccgcacgctcttcgagctgctgtcggaggcg 602 |||||| | |||| || |||||||||||||||||| Sbjct: 36105135 ctgggcggggcgctgttggagctgctgtcggaggcg 36105170 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 276 gtgggcttcttccaggtggtgaaccacggc 305 ||||| |||||||||||||||||||||||| Sbjct: 36104841 gtggggttcttccaggtggtgaaccacggc 36104870 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggagg 372 |||||| |||||| ||||| | ||||||||| |||||||||||| Sbjct: 36104894 gatgctggcggcggtgcggcggttcaacgagcagccggcggagg 36104937 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgtgc 309 |||||||||| ||||||||||||||||| Sbjct: 10013919 ttcttccaggcggtgaaccacggcgtgc 10013892 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 327 gggatgctcgcggcgttgcggagcttcaacgaggagccggcgg 369 ||||||||||||||| ||||| | ||||||||| |||||||| Sbjct: 27381797 gggatgctcgcggcggtgcggcggttcaacgagcggccggcgg 27381755 Score = 40.1 bits (20), Expect = 8.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttc 476 |||||||||||| ||| |||| | || |||| |||||||||||| |||||| Sbjct: 27381696 caacttcgacctgttcgagtcccccgccgccaactggcgcgacacgctcttc 27381645
>ref|XM_482200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1131 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 43 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 102 Query: 120 ccc 122 ||| Sbjct: 103 ccc 105 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 ||||||||||||||||| |||| |||||||| |||||| ||||| | ||| | ||||| Sbjct: 396 caacttcgacctcttccgttcgccggcggccaactggcgggacacgatgttcgtcgagat 455 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 | ||||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 456 gttcccggaggtgccctcgccggaggagatcccgccgccgtgcagg 501 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 243 gtggtcggcgcggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccac 302 ||||||| || ||||| | ||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 214 gtggtcgccgaggtgaggacggccgccgagacggtcggcttcttccaggtggtcaaccat 273 Query: 303 ggcgt 307 ||||| Sbjct: 274 ggcgt 278 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| |||||||||||||||| Sbjct: 300 gatgctcgcggcggtgcggcgcttcaacgaggagcc 335 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 553 ttcgagctgctgtcggaggcg 573
>ref|XM_482188.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1478 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 116 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 175 Query: 120 ccc 122 ||| Sbjct: 176 ccc 178 Score = 54.0 bits (27), Expect = 5e-04 Identities = 83/99 (83%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggc-cagctggcgcgacaccctcttcatggag 482 ||||||||||||| |||||||||| |||||| ||| ||||||||||| || | | ||||| Sbjct: 468 gcaacttcgacctgttccagtcgccggcggcgcag-tggcgcgacacgctgtacgtggag 526 Query: 483 atggccccggagccgccgccgcccgaggagatcccgccg 521 |||| || || |||| |||| ||||||||||||||| Sbjct: 527 atggtgcccgacgcgccctcgccggaggagatcccgccg 565 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggaggcaaagcggccgtacta 388 ||||||||||||| |||| | ||||||||| |||| |||||||| ||| ||| ||||| Sbjct: 373 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 432 Query: 389 cagccgggacc 399 || | |||||| Sbjct: 433 caccagggacc 443 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 285 ttccaggtggtgaaccacggcgt 307 ||||||||||||||||||||||| Sbjct: 329 ttccaggtggtgaaccacggcgt 351
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 18563000 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 18562941 Query: 120 ccc 122 ||| Sbjct: 18562940 ccc 18562938 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 18536303 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 18536244 Query: 120 ccc 122 ||| Sbjct: 18536243 ccc 18536241 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 18485909 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 18485850 Query: 120 ccc 122 ||| Sbjct: 18485849 ccc 18485847 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 ||||| |||||| |||| | ||| |||||||| |||||||||||| || ||||||||||| Sbjct: 18575909 caactacgacctgttccggccgccggcggccaactggcgcgacacgctgttcatggagat 18575968 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 ||| |||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 18575969 ggcgccggaggggccttcgccggaggagatcccgccgccgtgcagg 18576014 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| || || Sbjct: 18502846 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccatc 18502787 Query: 120 ccc 122 ||| Sbjct: 18502786 ccc 18502784 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 ||||||||||| ||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 18540550 aggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcaccgcca 18540491 Query: 118 tcccc 122 ||||| Sbjct: 18540490 tcccc 18540486 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 ||||||||||||||||||||||||||||||| | ||||| || || ||||||||| ||| Sbjct: 18574445 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 18574504 Query: 118 tccccg 123 |||||| Sbjct: 18574505 tccccg 18574510 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 |||||||||||| |||| |||| |||||||| |||||||||||| | | || ||||| Sbjct: 18502493 caacttcgacctgttccgttcgccggcggccaactggcgcgacacgttggtgatcgagat 18502434 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 | |||||||||||| |||| ||||||||||||||| |||||||| Sbjct: 18502433 gtggccggagccgccgtcgccggaggagatcccgccgccgtgcagg 18502388 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 243 gtggtcggcgcggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccac 302 ||||||| || ||| | |||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 18536151 gtggtcgccgaggtcagggcggccgcggagacggtcggcttcttccaggtggtcaaccat 18536092 Query: 303 ggcgt 307 ||||| Sbjct: 18536091 ggcgt 18536087 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 ||||||||||||||||| |||| |||||||| |||||| ||||| | ||| | ||||| Sbjct: 18562647 caacttcgacctcttccgttcgccggcggccaactggcgggacacgatgttcgtcgagat 18562588 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 | ||||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 18562587 gttcccggaggtgccctcgccggaggagatcccgccgccgtgcagg 18562542 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 243 gtggtcggcgcggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccac 302 ||||||| || ||||| | ||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 18562829 gtggtcgccgaggtgaggacggccgccgagacggtcggcttcttccaggtggtcaaccat 18562770 Query: 303 ggcgt 307 ||||| Sbjct: 18562769 ggcgt 18562765 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 254 ggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccacggcgt 307 |||||||||||| || |||||||| |||||||||||||| || ||||| ||||| Sbjct: 18502664 ggtgacggcggcagccgagacggtcggcttcttccaggttgtcaaccatggcgt 18502611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| |||||||||||||||| Sbjct: 18562743 gatgctcgcggcggtgcggcgcttcaacgaggagcc 18562708 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| |||||||||||||||| Sbjct: 18502589 gatgctcgcggcggtgcggcgcttcaacgaggagcc 18502554 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||||||||||||||||||| Sbjct: 28036452 ttcttccaggtggtgaaccacggcgtg 28036478 Score = 54.0 bits (27), Expect = 5e-04 Identities = 83/99 (83%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 424 gcaacttcgacctcttccagtcgcgggcggc-cagctggcgcgacaccctcttcatggag 482 ||||||||||||| |||||||||| |||||| ||| ||||||||||| || | | ||||| Sbjct: 18485557 gcaacttcgacctgttccagtcgccggcggcgcag-tggcgcgacacgctgtacgtggag 18485499 Query: 483 atggccccggagccgccgccgcccgaggagatcccgccg 521 |||| || || |||| |||| ||||||||||||||| Sbjct: 18485498 atggtgcccgacgcgccctcgccggaggagatcccgccg 18485460 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 270 gagacggtgggcttcttccaggtggtgaaccacg 303 |||||||| ||||||||||||||||| ||||||| Sbjct: 18575754 gagacggtcggcttcttccaggtggtcaaccacg 18575787 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggaggcaaagcggccgtacta 388 ||||||||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 18536065 gatgctcgcggcggtgcggcgcttccacgaggagcccctggaggcgaaggtgccgtacta 18536006 Query: 389 ca 390 || Sbjct: 18536005 ca 18536004 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 452 ggccagctggcgcgacaccctcttcatggagatggccccggagccgccgccgcccgagga 511 ||||| |||||||||||| | ||| | |||||| ||||||| |||| |||| || || Sbjct: 18535930 ggccaactggcgcgacacgatgttcgttgagatgttcccggaggcgccctcgccggaaga 18535871 Query: 512 gatcccgccggcgtgcagg 530 |||||||||| |||||||| Sbjct: 18535870 gatcccgccgccgtgcagg 18535852 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 285 ttccaggtggtgaaccacggcgt 307 ||||||||||||||||||||||| Sbjct: 18485696 ttccaggtggtgaaccacggcgt 18485674 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggaggcaaagcggccgtacta 388 ||||||||||||| |||| | ||||||||| |||| |||||||| ||| ||| ||||| Sbjct: 18485652 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 18485593 Query: 389 cagccgggacc 399 || | |||||| Sbjct: 18485592 caccagggacc 18485582 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 18576058 ttcgagctgctgtcggaggcg 18576078 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 18562490 ttcgagctgctgtcggaggcg 18562470 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 18535800 ttcgagctgctgtcggaggcg 18535780 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| | ||||||||| |||| Sbjct: 18540291 gatgctcgcggcgatgcggcggttcaacgagcagcc 18540256
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 145023 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 144964 Query: 120 ccc 122 ||| Sbjct: 144963 ccc 144961 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 118326 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 118267 Query: 120 ccc 122 ||| Sbjct: 118266 ccc 118264 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 67932 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 67873 Query: 120 ccc 122 ||| Sbjct: 67872 ccc 67870 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 ||||| |||||| |||| | ||| |||||||| |||||||||||| || ||||||||||| Sbjct: 157932 caactacgacctgttccggccgccggcggccaactggcgcgacacgctgttcatggagat 157991 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 ||| |||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 157992 ggcgccggaggggccttcgccggaggagatcccgccgccgtgcagg 158037 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| || || Sbjct: 84869 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccatc 84810 Query: 120 ccc 122 ||| Sbjct: 84809 ccc 84807 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 ||||||||||| ||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 122573 aggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcaccgcca 122514 Query: 118 tcccc 122 ||||| Sbjct: 122513 tcccc 122509 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 ||||||||||||||||||||||||||||||| | ||||| || || ||||||||| ||| Sbjct: 156468 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 156527 Query: 118 tccccg 123 |||||| Sbjct: 156528 tccccg 156533 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 |||||||||||| |||| |||| |||||||| |||||||||||| | | || ||||| Sbjct: 84516 caacttcgacctgttccgttcgccggcggccaactggcgcgacacgttggtgatcgagat 84457 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 | |||||||||||| |||| ||||||||||||||| |||||||| Sbjct: 84456 gtggccggagccgccgtcgccggaggagatcccgccgccgtgcagg 84411 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 243 gtggtcggcgcggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccac 302 ||||||| || ||| | |||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 118174 gtggtcgccgaggtcagggcggccgcggagacggtcggcttcttccaggtggtcaaccat 118115 Query: 303 ggcgt 307 ||||| Sbjct: 118114 ggcgt 118110 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 ||||||||||||||||| |||| |||||||| |||||| ||||| | ||| | ||||| Sbjct: 144670 caacttcgacctcttccgttcgccggcggccaactggcgggacacgatgttcgtcgagat 144611 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 | ||||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 144610 gttcccggaggtgccctcgccggaggagatcccgccgccgtgcagg 144565 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 243 gtggtcggcgcggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccac 302 ||||||| || ||||| | ||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 144852 gtggtcgccgaggtgaggacggccgccgagacggtcggcttcttccaggtggtcaaccat 144793 Query: 303 ggcgt 307 ||||| Sbjct: 144792 ggcgt 144788 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 254 ggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccacggcgt 307 |||||||||||| || |||||||| |||||||||||||| || ||||| ||||| Sbjct: 84687 ggtgacggcggcagccgagacggtcggcttcttccaggttgtcaaccatggcgt 84634 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| |||||||||||||||| Sbjct: 144766 gatgctcgcggcggtgcggcgcttcaacgaggagcc 144731 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| |||||||||||||||| Sbjct: 84612 gatgctcgcggcggtgcggcgcttcaacgaggagcc 84577 Score = 54.0 bits (27), Expect = 5e-04 Identities = 83/99 (83%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 424 gcaacttcgacctcttccagtcgcgggcggc-cagctggcgcgacaccctcttcatggag 482 ||||||||||||| |||||||||| |||||| ||| ||||||||||| || | | ||||| Sbjct: 67580 gcaacttcgacctgttccagtcgccggcggcgcag-tggcgcgacacgctgtacgtggag 67522 Query: 483 atggccccggagccgccgccgcccgaggagatcccgccg 521 |||| || || |||| |||| ||||||||||||||| Sbjct: 67521 atggtgcccgacgcgccctcgccggaggagatcccgccg 67483 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 270 gagacggtgggcttcttccaggtggtgaaccacg 303 |||||||| ||||||||||||||||| ||||||| Sbjct: 157777 gagacggtcggcttcttccaggtggtcaaccacg 157810 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggaggcaaagcggccgtacta 388 ||||||||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 118088 gatgctcgcggcggtgcggcgcttccacgaggagcccctggaggcgaaggtgccgtacta 118029 Query: 389 ca 390 || Sbjct: 118028 ca 118027 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 452 ggccagctggcgcgacaccctcttcatggagatggccccggagccgccgccgcccgagga 511 ||||| |||||||||||| | ||| | |||||| ||||||| |||| |||| || || Sbjct: 117953 ggccaactggcgcgacacgatgttcgttgagatgttcccggaggcgccctcgccggaaga 117894 Query: 512 gatcccgccggcgtgcagg 530 |||||||||| |||||||| Sbjct: 117893 gatcccgccgccgtgcagg 117875 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 285 ttccaggtggtgaaccacggcgt 307 ||||||||||||||||||||||| Sbjct: 67719 ttccaggtggtgaaccacggcgt 67697 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggaggcaaagcggccgtacta 388 ||||||||||||| |||| | ||||||||| |||| |||||||| ||| ||| ||||| Sbjct: 67675 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 67616 Query: 389 cagccgggacc 399 || | |||||| Sbjct: 67615 caccagggacc 67605 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 158081 ttcgagctgctgtcggaggcg 158101 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 144513 ttcgagctgctgtcggaggcg 144493 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 117823 ttcgagctgctgtcggaggcg 117803 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| | ||||||||| |||| Sbjct: 122314 gatgctcgcggcgatgcggcggttcaacgagcagcc 122279
>dbj|AK068286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K15, full insert sequence Length = 1478 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 116 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtc 175 Query: 120 ccc 122 ||| Sbjct: 176 ccc 178 Score = 54.0 bits (27), Expect = 5e-04 Identities = 83/99 (83%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggc-cagctggcgcgacaccctcttcatggag 482 ||||||||||||| |||||||||| |||||| ||| ||||||||||| || | | ||||| Sbjct: 468 gcaacttcgacctgttccagtcgccggcggcgcag-tggcgcgacacgctgtacgtggag 526 Query: 483 atggccccggagccgccgccgcccgaggagatcccgccg 521 |||| || || |||| |||| ||||||||||||||| Sbjct: 527 atggtgcccgacgcgccctcgccggaggagatcccgccg 565 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggaggcaaagcggccgtacta 388 ||||||||||||| |||| | ||||||||| |||| |||||||| ||| ||| ||||| Sbjct: 373 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 432 Query: 389 cagccgggacc 399 || | |||||| Sbjct: 433 caccagggacc 443 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 285 ttccaggtggtgaaccacggcgt 307 ||||||||||||||||||||||| Sbjct: 329 ttccaggtggtgaaccacggcgt 351
>ref|XM_482202.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 ||||| |||||| |||| | ||| |||||||| |||||||||||| || ||||||||||| Sbjct: 645 caactacgacctgttccggccgccggcggccaactggcgcgacacgctgttcatggagat 704 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 ||| |||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 705 ggcgccggaggggccttcgccggaggagatcccgccgccgtgcagg 750 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 270 gagacggtgggcttcttccaggtggtgaaccacg 303 |||||||| ||||||||||||||||| ||||||| Sbjct: 490 gagacggtcggcttcttccaggtggtcaaccacg 523 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 794 ttcgagctgctgtcggaggcg 814
>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1756_G07 Length = 149457 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 ||||| |||||| |||| | ||| |||||||| |||||||||||| || ||||||||||| Sbjct: 3179 caactacgacctgttccggccgccggcggccaactggcgcgacacgctgttcatggagat 3238 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 ||| |||||| ||| |||| ||||||||||||||| |||||||| Sbjct: 3239 ggcgccggaggggccttcgccggaggagatcccgccgccgtgcagg 3284 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 ||||||||||||||||||||||||||||||| | ||||| || || ||||||||| ||| Sbjct: 1715 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 1774 Query: 118 tccccg 123 |||||| Sbjct: 1775 tccccg 1780 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 270 gagacggtgggcttcttccaggtggtgaaccacg 303 |||||||| ||||||||||||||||| ||||||| Sbjct: 3024 gagacggtcggcttcttccaggtggtcaaccacg 3057 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 3328 ttcgagctgctgtcggaggcg 3348
>ref|XM_482192.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 60 gccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| || || Sbjct: 43 gccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccatc 102 Query: 120 ccc 122 ||| Sbjct: 103 ccc 105 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 425 caacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctcttcatggagat 484 |||||||||||| |||| |||| |||||||| |||||||||||| | | || ||||| Sbjct: 396 caacttcgacctgttccgttcgccggcggccaactggcgcgacacgttggtgatcgagat 455 Query: 485 ggccccggagccgccgccgcccgaggagatcccgccggcgtgcagg 530 | |||||||||||| |||| ||||||||||||||| |||||||| Sbjct: 456 gtggccggagccgccgtcgccggaggagatcccgccgccgtgcagg 501 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 254 ggtgacggcggccgcggagacggtgggcttcttccaggtggtgaaccacggcgt 307 |||||||||||| || |||||||| |||||||||||||| || ||||| ||||| Sbjct: 225 ggtgacggcggcagccgagacggtcggcttcttccaggttgtcaaccatggcgt 278 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagcc 364 ||||||||||||| ||||| |||||||||||||||| Sbjct: 300 gatgctcgcggcggtgcggcgcttcaacgaggagcc 335
>ref|XM_482196.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1146 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 ||||||||||| ||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 41 aggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcaccgcca 100 Query: 118 tcccc 122 ||||| Sbjct: 101 tcccc 105 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 264 gccgcggagacggtgggcttcttccaggtggtgaaccacggcgt 307 ||||| |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 235 gccgccgagacggtcggcttcttccaggtggtcaaccatggcgt 278 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggaggcaaagcggccgtacta 388 ||||||||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 300 gatgctcgcggcggtgcggcgcttccacgaggagcccctggaggcgaaggtgccgtacta 359 Query: 389 ca 390 || Sbjct: 360 ca 361 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Plus Query: 452 ggccagctggcgcgacaccctcttcatggagatggccccggagccgccgccgcccgagga 511 ||||| |||||||||||| | ||| | |||||| ||||||| |||| |||| || || Sbjct: 435 ggccaactggcgcgacacgatgttcgttgagatgttcccggaggcgccctcgccggaaga 494 Query: 512 gatcccgccggcgtgcagg 530 |||||||||| |||||||| Sbjct: 495 gatcccgccgccgtgcagg 513 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 ttcgagctgctgtcggaggcg 602 ||||||||||||||||||||| Sbjct: 565 ttcgagctgctgtcggaggcg 585
>ref|XM_482201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 252 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 ||||||||||||||||||||||||||||||| | ||||| || || ||||||||| ||| Sbjct: 65 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 124 Query: 118 tccccg 123 |||||| Sbjct: 125 tccccg 130
>ref|XM_470509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 |||||||||||||||| ||||||||||| || |||||||| || || |||||||| || Sbjct: 41 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 100 Query: 118 tccccgcaatctttcaccacc 138 ||||||| ||||| ||||||| Sbjct: 101 tccccgccatcttccaccacc 121 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 507 gaggagatcccgccggcgtgcaggcgtgtggcgccggagtacgtggggctagtgcaacgg 566 ||||||||||| |||||||||||| | |||| | ||||||||||| | ||||| || Sbjct: 472 gaggagatcccaccggcgtgcaggggcgtggtgggggagtacgtggaggcggtgcagagg 531 Query: 567 ctgggccgcacgctcttcgagctgctgtcggaggcg 602 |||||| | |||| || |||||||||||||||||| Sbjct: 532 ctgggcggggcgctgttggagctgctgtcggaggcg 567 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 276 gtgggcttcttccaggtggtgaaccacggc 305 ||||| |||||||||||||||||||||||| Sbjct: 238 gtggggttcttccaggtggtgaaccacggc 267 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggagg 372 |||||| |||||| ||||| | ||||||||| |||||||||||| Sbjct: 291 gatgctggcggcggtgcggcggttcaacgagcagccggcggagg 334
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 |||||||||||||||| ||||||||||| || |||||||| || || |||||||| || Sbjct: 76081 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 76140 Query: 118 tccccgcaatctttcaccacc 138 ||||||| ||||| ||||||| Sbjct: 76141 tccccgccatcttccaccacc 76161 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 507 gaggagatcccgccggcgtgcaggcgtgtggcgccggagtacgtggggctagtgcaacgg 566 ||||||||||| |||||||||||| | |||| | ||||||||||| | ||||| || Sbjct: 76512 gaggagatcccaccggcgtgcaggggcgtggtgggggagtacgtggaggcggtgcagagg 76571 Query: 567 ctgggccgcacgctcttcgagctgctgtcggaggcg 602 |||||| | |||| || |||||||||||||||||| Sbjct: 76572 ctgggcggggcgctgttggagctgctgtcggaggcg 76607 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 276 gtgggcttcttccaggtggtgaaccacggc 305 ||||| |||||||||||||||||||||||| Sbjct: 76278 gtggggttcttccaggtggtgaaccacggc 76307 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggagg 372 |||||| |||||| ||||| | ||||||||| |||||||||||| Sbjct: 76331 gatgctggcggcggtgcggcggttcaacgagcagccggcggagg 76374
>dbj|AK071828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118E08, full insert sequence Length = 1252 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 58 aggccttcgacgacaccaaggccggcgtcaaaggcctcgtggacgcgggcgtcaccgccg 117 |||||||||||||||| ||||||||||| || |||||||| || || |||||||| || Sbjct: 60 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 119 Query: 118 tccccgcaatctttcaccacc 138 ||||||| ||||| ||||||| Sbjct: 120 tccccgccatcttccaccacc 140 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 507 gaggagatcccgccggcgtgcaggcgtgtggcgccggagtacgtggggctagtgcaacgg 566 ||||||||||| |||||||||||| | |||| | ||||||||||| | ||||| || Sbjct: 491 gaggagatcccaccggcgtgcaggggcgtggtgggggagtacgtggaggcggtgcagagg 550 Query: 567 ctgggccgcacgctcttcgagctgctgtcggaggcg 602 |||||| | |||| || |||||||||||||||||| Sbjct: 551 ctgggcggggcgctgttggagctgctgtcggaggcg 586 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 276 gtgggcttcttccaggtggtgaaccacggc 305 ||||| |||||||||||||||||||||||| Sbjct: 257 gtggggttcttccaggtggtgaaccacggc 286 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 329 gatgctcgcggcgttgcggagcttcaacgaggagccggcggagg 372 |||||| |||||| ||||| | ||||||||| |||||||||||| Sbjct: 310 gatgctggcggcggtgcggcggttcaacgagcagccggcggagg 353
>ref|XM_476744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1298 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||||||||||||| Sbjct: 253 ggcttcttccaggtggtgaaccacggcgtgcc 284
>dbj|AK121818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099A15, full insert sequence Length = 1301 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||||||||||||| Sbjct: 257 ggcttcttccaggtggtgaaccacggcgtgcc 288
>dbj|AK060318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F03, full insert sequence Length = 1298 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||||||||||||| Sbjct: 253 ggcttcttccaggtggtgaaccacggcgtgcc 284
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggccagctggcgcgaca 468 ||||||||||||| | |||||||| |||||||| ||||||||||| Sbjct: 5525902 gcaacttcgacctgtaccagtcgccggcggccaactggcgcgaca 5525946 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctct 474 ||||||||||||| | |||||||| || ||||| |||||||||||| |||| Sbjct: 5555703 gcaacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 5555753 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 278 gggcttcttccaggtggtgaaccacggcgtg 308 |||| |||||||||||||| ||||||||||| Sbjct: 33845897 gggcatcttccaggtggtggaccacggcgtg 33845867 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 90 ggcctcgtggacgcgggcgtcaccgccgtcccc 122 |||||||| | | |||||||||||||||||||| Sbjct: 5525581 ggcctcgtcgcctcgggcgtcaccgccgtcccc 5525613 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggagccggcggaggcaaagc 378 |||||||||||||||||||| Sbjct: 27395947 ggagccggcggaggcaaagc 27395966
>gb|AY104706.1| Zea mays PCO076122 mRNA sequence Length = 1382 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaaccacggcgt 307 ||||||||||||||||||||||||||||| Sbjct: 291 ggcttcttccaggtggtgaaccacggcgt 319
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggccagctggcgcgaca 468 ||||||||||||| | |||||||| |||||||| ||||||||||| Sbjct: 80532 gcaacttcgacctgtaccagtcgccggcggccaactggcgcgaca 80576 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctct 474 ||||||||||||| | |||||||| || ||||| |||||||||||| |||| Sbjct: 110333 gcaacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 110383 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 90 ggcctcgtggacgcgggcgtcaccgccgtcccc 122 |||||||| | | |||||||||||||||||||| Sbjct: 80211 ggcctcgtcgcctcgggcgtcaccgccgtcccc 80243
>ref|XM_467968.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1222 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 283 tcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||||||||| Sbjct: 282 tcttccaggtggtgaaccacggcgtgcc 309
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 283 tcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||||||||| Sbjct: 32330397 tcttccaggtggtgaaccacggcgtgcc 32330370 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgt 307 |||||||||||||||||||||||||| Sbjct: 25221862 ttcttccaggtggtgaaccacggcgt 25221837
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 283 tcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||||||||| Sbjct: 106229 tcttccaggtggtgaaccacggcgtgcc 106202
>dbj|AK072697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136E04, full insert sequence Length = 1222 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 283 tcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||||||||| Sbjct: 282 tcttccaggtggtgaaccacggcgtgcc 309
>ref|XM_507337.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.31 mRNA Length = 1988 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||||||||||||||||||| Sbjct: 482 ttcttccaggtggtgaaccacggcgtg 508
>ref|XM_483774.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1422 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||||||||||||||||||| Sbjct: 486 ttcttccaggtggtgaaccacggcgtg 512
>ref|XM_474682.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctct 474 ||||||||||||| | |||||||| || ||||| |||||||||||| |||| Sbjct: 440 gcaacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 490
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||||||||||||||||||| Sbjct: 113944 ttcttccaggtggtgaaccacggcgtg 113970
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||||||||||||||||||| Sbjct: 33947 ttcttccaggtggtgaaccacggcgtg 33973
>dbj|AK107230.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-E03, full insert sequence Length = 1988 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||||||||||||||||||| Sbjct: 482 ttcttccaggtggtgaaccacggcgtg 508
>dbj|AK107117.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A12, full insert sequence Length = 1422 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||||||||||||||||||| Sbjct: 486 ttcttccaggtggtgaaccacggcgtg 512
>dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E20, full insert sequence Length = 1387 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctct 474 ||||||||||||| | |||||||| || ||||| |||||||||||| |||| Sbjct: 450 gcaacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 500
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 424 gcaacttcgacctcttccagtcgcgggcggccagctggcgcgacaccctct 474 ||||||||||||| | |||||||| || ||||| |||||||||||| |||| Sbjct: 12910 gcaacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 12960
>ref|XM_476745.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1104 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgt 307 |||||||||||||||||||||||||| Sbjct: 202 ttcttccaggtggtgaaccacggcgt 227
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgt 307 |||||||||||||||||||||||||| Sbjct: 3734699 ttcttccaggtggtgaaccacggcgt 3734724 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgagg 510 |||||||||||||||||||||| Sbjct: 8320398 ccggagccgccgccgcccgagg 8320377 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 289 aggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||| Sbjct: 3732131 aggtggtgaaccacggcgtgcc 3732152 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||| |||||||||||||| Sbjct: 217417 gggcttcttccaggtgaccaaccacggcgtgcc 217449
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgt 307 |||||||||||||||||||||||||| Sbjct: 79050 ttcttccaggtggtgaaccacggcgt 79075 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 289 aggtggtgaaccacggcgtgcc 310 |||||||||||||||||||||| Sbjct: 76482 aggtggtgaaccacggcgtgcc 76503
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgt 307 |||||||||||||||||||||||||| Sbjct: 122255 ttcttccaggtggtgaaccacggcgt 122230
>dbj|AK108598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E04, full insert sequence Length = 1660 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgt 307 |||||||||||||||||||||||||| Sbjct: 374 ttcttccaggtggtgaaccacggcgt 399
>dbj|AK059045.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D08, full insert sequence Length = 1741 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgt 307 |||||||||||||||||||||||||| Sbjct: 372 ttcttccaggtggtgaaccacggcgt 397
>gb|AF540907.1| Zea mays 2-oxoglutarate-dependent oxygenase (bx6) mRNA, complete cds Length = 1365 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 272 gacggtgggcttcttccaggtggtgaaccacggcgtg 308 |||||||||||||||| | ||||||||||||||||| Sbjct: 323 gacggtgggcttcttctggctggtgaaccacggcgtg 359
>gb|AY104457.1| Zea mays PCO086194 mRNA sequence Length = 1459 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 272 gacggtgggcttcttccaggtggtgaaccacggcgtg 308 |||||||||||||||| | ||||||||||||||||| Sbjct: 343 gacggtgggcttcttctggctggtgaaccacggcgtg 379
>dbj|AB071820.1| Cucumis melo CmE8 gene, complete cds Length = 3636 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 54 ctcaaggccttcgacgacaccaaggccggcgtcaaaggcct 94 ||||| ||||||||| | || |||||||||||||||||||| Sbjct: 1955 ctcaaagccttcgaccaaacaaaggccggcgtcaaaggcct 1995
>ref|NM_190455.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgc 309 |||||||||||||||||| |||||||| |||| Sbjct: 234 gggcttcttccaggtggtaaaccacggggtgc 265
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgtgc 309 |||||||||| ||||||||||||||||| Sbjct: 65714 ttcttccaggcggtgaaccacggcgtgc 65687
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgc 309 |||||||||||||||||| |||||||| |||| Sbjct: 35630379 gggcttcttccaggtggtaaaccacggggtgc 35630410 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggtcggcgcggtgacggcgg 264 |||||||||||||||||||| Sbjct: 4488954 ggtcggcgcggtgacggcgg 4488973
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgc 309 |||||||||||||||||| |||||||| |||| Sbjct: 33716 gggcttcttccaggtggtaaaccacggggtgc 33747
>dbj|AK110790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C12, full insert sequence Length = 1180 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgtgc 309 |||||||||| ||||||||||||||||| Sbjct: 584 ttcttccaggcggtgaaccacggcgtgc 557
>dbj|AK106774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-G04, full insert sequence Length = 1513 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgc 309 |||||||||||||||||| |||||||| |||| Sbjct: 363 gggcttcttccaggtggtaaaccacggggtgc 394
>dbj|AK069008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003A10, full insert sequence Length = 1880 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtgc 309 |||||||||| ||||||||||||||||| Sbjct: 345 ttcttccaggcggtgaaccacggcgtgc 372
>dbj|AK060599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H01, full insert sequence Length = 1367 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtgc 309 |||||||||| ||||||||||||||||| Sbjct: 351 ttcttccaggcggtgaaccacggcgtgc 378
>ref|NM_120642.2| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase AT5G05600 mRNA, complete cds Length = 1399 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacgg 304 ||||||||||||||||||||||| Sbjct: 426 ttcttccaggtggtgaaccacgg 448
>ref|NM_112126.1| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > AT3G12900 mRNA, complete cds Length = 1074 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaacca 301 ||||||||||||||||||||||| Sbjct: 250 ggcttcttccaggtggtgaacca 272
>ref|XM_474226.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1134 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtg 308 |||| |||||||||||||| ||||||||||| Sbjct: 204 gggcatcttccaggtggtggaccacggcgtg 234
>ref|NM_197542.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0040D23.1), mRNA Length = 1494 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaacca 301 ||||||||||||||||||||||| Sbjct: 202 ggcttcttccaggtggtgaacca 224
>gb|AY551429.1| Hordeum vulgare subsp. vulgare GA 20-oxidase 3 (GA20ox3) mRNA, complete cds Length = 1443 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtg 308 ||||||||||| ||||||||||||||| Sbjct: 298 ttcttccaggtcgtgaaccacggcgtg 324
>gb|DQ446658.1| Arabidopsis thaliana clone pENTR221-At3g12900 oxidoreductase 2OG-Fe(II) oxygenase family protein (At3g12900) mRNA, complete cds Length = 1074 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaacca 301 ||||||||||||||||||||||| Sbjct: 250 ggcttcttccaggtggtgaacca 272
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 278 gggcttcttccaggtggtgaaccacggcgtg 308 |||| |||||||||||||| ||||||||||| Sbjct: 57796 gggcatcttccaggtggtggaccacggcgtg 57766
>gb|AY133665.1| Arabidopsis thaliana AT5g05600/MOP10_14 mRNA, complete cds Length = 1116 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacgg 304 ||||||||||||||||||||||| Sbjct: 280 ttcttccaggtggtgaaccacgg 302
>gb|AY039893.1| Arabidopsis thaliana AT5g05600/MOP10_14 mRNA, complete cds Length = 1256 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacgg 304 ||||||||||||||||||||||| Sbjct: 297 ttcttccaggtggtgaaccacgg 319
>emb|BX831186.1|CNS09ZHB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZH11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1202 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacgg 304 ||||||||||||||||||||||| Sbjct: 284 ttcttccaggtggtgaaccacgg 306
>gb|AY085111.1| Arabidopsis thaliana clone 13012 mRNA, complete sequence Length = 1307 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacgg 304 ||||||||||||||||||||||| Sbjct: 426 ttcttccaggtggtgaaccacgg 448
>dbj|AB005241.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP10 Length = 57892 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacgg 304 ||||||||||||||||||||||| Sbjct: 51160 ttcttccaggtggtgaaccacgg 51182
>gb|BT024055.1| Zea mays clone EL01N0440A10 mRNA sequence Length = 1384 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 272 gacggtgggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||| | ||||||||||||| ||||| Sbjct: 330 gacggtgggcttcttctggctggtgaaccacggagtgcc 368
>dbj|AK061357.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B08, full insert sequence Length = 1004 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaacca 301 ||||||||||||||||||||||| Sbjct: 317 ggcttcttccaggtggtgaacca 339
>gb|AY110926.1| Zea mays CL2322_1 mRNA sequence Length = 1495 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtg 308 |||| |||||||||||||| ||||||||||| Sbjct: 305 gggcatcttccaggtggtggaccacggcgtg 335
>gb|U04434.1|ZMFHT Zea mays flavanone 3-beta-hydroxylase (fht) mRNA, complete cds Length = 1523 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtg 308 |||| |||||||||||||| ||||||||||| Sbjct: 305 gggcatcttccaggtggtggaccacggcgtg 335
>ref|NM_186842.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1048 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgagg 510 |||||||||||||||||||||| Sbjct: 273 ccggagccgccgccgcccgagg 252
>ref|XM_506242.1| PREDICTED Oryza sativa (japonica cultivar-group), P0021G06.107 mRNA Length = 1123 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgagg 510 |||||||||||||||||||||| Sbjct: 347 ccggagccgccgccgcccgagg 326
>gb|AY232493.1| Anthurium andraeanum putative flavonoid 3-hydroxylase (F3H1) mRNA, complete cds Length = 1588 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgt 307 |||| |||||||||||||| |||||||||| Sbjct: 433 gggcatcttccaggtggtggaccacggcgt 462
>ref|XM_872979.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 12 (LOC535775), mRNA Length = 4514 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_872898.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 11 (LOC535775), mRNA Length = 4611 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_872795.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 10 (LOC535775), mRNA Length = 4626 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_872708.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 9 (LOC535775), mRNA Length = 4644 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_872591.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 8 (LOC535775), mRNA Length = 4563 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_615888.2| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 1 (LOC535775), mRNA Length = 4674 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_864176.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 3 (LOC535775), mRNA Length = 4758 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_872296.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 7 (LOC535775), mRNA Length = 4545 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_872177.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 6 (LOC535775), mRNA Length = 4776 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>ref|XM_872086.1| PREDICTED: Bos taurus similar to bromodomain and PHD finger-containing protein 1 isoform 2, transcript variant 5 (LOC535775), mRNA Length = 4656 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcgcggtgacggcggccgcggagacggtgg 279 |||||| ||||||||| ||||||||||||| Sbjct: 36 gcgcggggacggcggcggcggagacggtgg 7
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 cggcgcggtgacggcggccgcg 269 |||||||||||||||||||||| Sbjct: 3181238 cggcgcggtgacggcggccgcg 3181259
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 247 tcggcgcggtgacggcggccgc 268 |||||||||||||||||||||| Sbjct: 1077729 tcggcgcggtgacggcggccgc 1077750
>emb|Y14007.1|TAY14007 Triticum aestivum mRNA for gibberellin 20-oxidase, clone S44B Length = 1431 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaaccacgg 304 |||||||||||||| ||||||||||| Sbjct: 320 ggcttcttccaggtcgtgaaccacgg 345
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 cggcgcggtgacggcggccgcg 269 |||||||||||||||||||||| Sbjct: 1358670 cggcgcggtgacggcggccgcg 1358691
>ref|NM_061062.3| Caenorhabditis elegans DNaJ domain (prokaryotic heat shock protein) family member (dnj-29) (dnj-29) mRNA, complete cds Length = 2641 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 490 cggagccgccgccgcccgaggagatc 515 |||||||||||||||| ||||||||| Sbjct: 1793 cggagccgccgccgccggaggagatc 1818
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cggcgcggtgacggcggccgcg 269 |||||||||||||||||||||| Sbjct: 1274499 cggcgcggtgacggcggccgcg 1274478
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgagg 510 |||||||||||||||||||||| Sbjct: 25496 ccggagccgccgccgcccgagg 25475
>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0639B07 Length = 138780 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgagg 510 |||||||||||||||||||||| Sbjct: 115510 ccggagccgccgccgcccgagg 115489
>dbj|AK102619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G24, full insert sequence Length = 1048 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgagg 510 |||||||||||||||||||||| Sbjct: 273 ccggagccgccgccgcccgagg 252
>dbj|AK059902.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G08, full insert sequence Length = 1123 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgagg 510 |||||||||||||||||||||| Sbjct: 347 ccggagccgccgccgcccgagg 326
>emb|AL032652.1|CEY63D3A Caenorhabditis elegans YAC Y63D3A, complete sequence Length = 33899 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 490 cggagccgccgccgcccgaggagatc 515 |||||||||||||||| ||||||||| Sbjct: 23589 cggagccgccgccgccggaggagatc 23564
>dbj|AB005555.1| Triticum aestivum mRNA for wga20, complete cds Length = 1343 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaaccacgg 304 |||||||||||||| ||||||||||| Sbjct: 354 ggcttcttccaggtcgtgaaccacgg 379
>ref|XM_475566.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtgcc 310 |||||||||| |||||||||||| ||||| Sbjct: 235 ttcttccaggcggtgaaccacggggtgcc 263
>ref|XM_476364.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 278 gggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||| |||||||||||||| Sbjct: 836 gggcttcttccaggtgaccaaccacggcgtgcc 804
>ref|NM_194218.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1729 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||| |||||||||||||| Sbjct: 603 gggcttcttccaggtgaccaaccacggcgtgcc 635
>ref|XM_950807.1| Neurospora crassa OR74A hypothetical protein (NCU07240.1) partial mRNA Length = 1053 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 tcgacctcttccagtcgcggg 450 ||||||||||||||||||||| Sbjct: 116 tcgacctcttccagtcgcggg 136
>ref|XM_327525.1| Neurospora crassa OR74A hypothetical protein (NCU07240.1) partial mRNA Length = 1053 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 tcgacctcttccagtcgcggg 450 ||||||||||||||||||||| Sbjct: 116 tcgacctcttccagtcgcggg 136
>gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome 15, complete sequence Length = 169842 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ggccccggagccgccgccgcc 505 ||||||||||||||||||||| Sbjct: 89135 ggccccggagccgccgccgcc 89115
>gb|AC161199.4| Mus musculus chromosome 15, clone RP23-383D13, complete sequence Length = 218523 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 ggccccggagccgccgccgcc 505 ||||||||||||||||||||| Sbjct: 203638 ggccccggagccgccgccgcc 203658
>ref|XM_987105.1| PREDICTED: Mus musculus hypothetical protein LOC666934 (LOC666934), mRNA Length = 375 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ggccccggagccgccgccgcc 505 ||||||||||||||||||||| Sbjct: 192 ggccccggagccgccgccgcc 172
>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the 3' end of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa, a novel gene, the NKX6-2 gene for NK6 transcription factor related locus 2, a novel gene (DKFZp434A1721), the 3' end of a novel gene and ten CpG islands, complete sequence Length = 208064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ggccccggagccgccgccgcc 505 ||||||||||||||||||||| Sbjct: 108693 ggccccggagccgccgccgcc 108673
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 gcgcggtgacggcggccgcggagacggtg 278 ||||||||||||||||| ||| ||||||| Sbjct: 163114 gcgcggtgacggcggcctcggtgacggtg 163142
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 gtcggcgcggtgacggcggccgcgg 270 ||||||||||||||||||| ||||| Sbjct: 5226558 gtcggcgcggtgacggcgggcgcgg 5226582
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgtgcc 310 |||||||||| |||||||||||| ||||| Sbjct: 1507308 ttcttccaggcggtgaaccacggggtgcc 1507280
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cggcgcggtgacggcggccgc 268 ||||||||||||||||||||| Sbjct: 2841321 cggcgcggtgacggcggccgc 2841301
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 ccggagccgccgccgcccgag 509 ||||||||||||||||||||| Sbjct: 3815418 ccggagccgccgccgcccgag 3815438
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||| |||||||||||||| Sbjct: 52281 gggcttcttccaggtgaccaaccacggcgtgcc 52313
>gb|AE005127.1| Halobacterium sp. NRC-1 section 158 of 170 of the complete genome Length = 10420 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 gacgcgggcgtcaccgccgtc 119 ||||||||||||||||||||| Sbjct: 430 gacgcgggcgtcaccgccgtc 450
>gb|AY160760.1| Synthetic construct anti-human B-cell antigen CD20 ScFv mRNA, complete cds Length = 1068 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 ccggagccgccgccgcccgag 509 ||||||||||||||||||||| Sbjct: 515 ccggagccgccgccgcccgag 495
>dbj|AB107223.1| Pseudomonas sp. MIS38 orf1, arfA, arfB, arfC, orf5, orf6 genes for putative DNA binding protein, arthrofactin synthetase A, arthrofactin synthetase B, arthrofactin synthetase C, putative periplasmic protein, putative ABC transporter protein, complete and partial cds Length = 40430 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 ggaccctggccggcgcgccag 415 ||||||||||||||||||||| Sbjct: 34835 ggaccctggccggcgcgccag 34855
>dbj|AK109056.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E10, full insert sequence Length = 1076 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 278 gggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||| |||||||||||||| Sbjct: 835 gggcttcttccaggtgaccaaccacggcgtgcc 803
>dbj|AK106859.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C01, full insert sequence Length = 1729 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggcgtgcc 310 |||||||||||||||| |||||||||||||| Sbjct: 603 gggcttcttccaggtgaccaaccacggcgtgcc 635
>dbj|AK068517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154G13, full insert sequence Length = 1562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggcgtgcc 310 |||||||||| |||||||||||| ||||| Sbjct: 456 ttcttccaggcggtgaaccacggggtgcc 484
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 ggcgcggtgacggcggccgcg 269 ||||||||||||||||||||| Sbjct: 2847549 ggcgcggtgacggcggccgcg 2847529
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 242 cgtggtcggcgcggtgacggcggccgcgg 270 |||||||||||| | |||||||||||||| Sbjct: 473739 cgtggtcggcgccgagacggcggccgcgg 473767
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 282 ttcttccaggtggtgaaccacggcgtgcc 310 |||||||||| |||||||||||| ||||| Sbjct: 101388 ttcttccaggcggtgaaccacggggtgcc 101360
>dbj|AB010832.2| Symbiobacterium thermophilum tryptophanase operon genes, partial and complete cds Length = 7896 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 242 cgtggtcggcgcggtgacggcggccgcgg 270 |||||||||||| | |||||||||||||| Sbjct: 421 cgtggtcggcgccgagacggcggccgcgg 449
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccgtggtcggcgcggtgacg 260 |||||||||||||||||||| Sbjct: 13111 ccgtggtcggcgcggtgacg 13092
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ccgccgccgcccgaggagat 514 |||||||||||||||||||| Sbjct: 1137978 ccgccgccgcccgaggagat 1137959
>ref|XM_550429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2147 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ggtcggcgcggtgacggcgg 264 |||||||||||||||||||| Sbjct: 205 ggtcggcgcggtgacggcgg 186
>ref|NM_190055.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaacca 301 ||||||||||||||| |||||||| Sbjct: 270 gggcttcttccaggttgtgaacca 293
>ref|XM_473407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ggagccggcggaggcaaagc 378 |||||||||||||||||||| Sbjct: 282 ggagccggcggaggcaaagc 263
>ref|NM_001507.1| Homo sapiens motilin receptor (MLNR), mRNA Length = 1239 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cgcgggcgtcaccgccgtccccgc 124 |||||||| ||||||||||||||| Sbjct: 632 cgcgggcgccaccgccgtccccgc 655
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cccatccccatggccaccag 185 |||||||||||||||||||| Sbjct: 4225732 cccatccccatggccaccag 4225713
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ccgccgccgcccgaggagat 514 |||||||||||||||||||| Sbjct: 1138832 ccgccgccgcccgaggagat 1138813
>ref|XM_417377.1| PREDICTED: Gallus gallus similar to R3H domain (binds single-stranded nucleic acids) containing-like (LOC419199), mRNA Length = 798 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 147 gccccggagccgccgccgcc 166
>gb|AC108882.4| Homo sapiens chromosome X clone RP11-77G22 map p11.4, complete sequence Length = 173352 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 agtcgcgggcggccagctgg 461 |||||||||||||||||||| Sbjct: 72211 agtcgcgggcggccagctgg 72230
>gb|AC092474.3| Homo sapiens chromosome X clone RP11-169L17 map p11.4, complete sequence Length = 170227 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 agtcgcgggcggccagctgg 461 |||||||||||||||||||| Sbjct: 157805 agtcgcgggcggccagctgg 157824
>ref|XM_957409.1| Neurospora crassa OR74A hypothetical protein (NCU08289.1) partial mRNA Length = 3402 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 acgaggagccggcggaggca 374 |||||||||||||||||||| Sbjct: 621 acgaggagccggcggaggca 602
>ref|XM_328994.1| Neurospora crassa OR74A hypothetical protein (NCU08289.1) partial mRNA Length = 3402 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 acgaggagccggcggaggca 374 |||||||||||||||||||| Sbjct: 621 acgaggagccggcggaggca 602
>ref|NM_016270.2| Homo sapiens Kruppel-like factor 2 (lung) (KLF2), mRNA Length = 1655 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 265 gccccggagccgccgccgcc 284
>gb|AY603964.1| Homo sapiens motilin/ghrelin receptor mRNA, complete cds Length = 1239 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cgcgggcgtcaccgccgtccccgc 124 |||||||| ||||||||||||||| Sbjct: 632 cgcgggcgccaccgccgtccccgc 655
>gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, complete sequence Length = 244671 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agctcgctccagtaatccat 28 |||||||||||||||||||| Sbjct: 126957 agctcgctccagtaatccat 126976
>gb|DQ160047.1| Taraxacum officinale TO43-3rc (To43-3rc) mRNA, partial cds Length = 260 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 279 ggcttcttccaggtggtgaaccacggcgtgcc 310 ||||||||||||||| ||||||||| ||||| Sbjct: 107 ggcttcttccaggtgaagaaccacggggtgcc 138
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 gccccggagccgccgccgcccgag 509 |||||||| ||||||||||||||| Sbjct: 5726971 gccccggaaccgccgccgcccgag 5726948
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggagccggcggaggcaaagc 378 |||||||||||||||||||| Sbjct: 130543 ggagccggcggaggcaaagc 130562
>ref|XM_546487.2| PREDICTED: Canis familiaris similar to CBL E3 ubiquitin protein ligase (Signal transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) (LOC489369), mRNA Length = 2310 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ccccggagccgccgccgccc 506 |||||||||||||||||||| Sbjct: 239 ccccggagccgccgccgccc 220
>emb|BX322644.8| Human DNA sequence from clone DAQB-112K1 on chromosome 6 Contains TRIM31 for tripartite motif-containing 3, TRIM40 for tripartite motif-containing 40 and 2 CpG islands, complete sequence Length = 52928 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 32389 accaacccatccccatgcccacca 32412
>emb|BX005441.10| Human DNA sequence from clone DASS-59H21 on chromosome 6, complete sequence Length = 57264 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 20711 accaacccatccccatgcccacca 20734
>emb|AL671859.3| Human DNA sequence from clone XXbac-218N7 on chromosome 6 contains the 5' end of the gene for HTEX4, 4.3 and 6, a eukaryotic translation termination factor 1 (ETF1) pseudogene, the ZNRD1 gene for zinc ribbon domain containing 1, the PPP1R11 gene for protein phosphatase 1, regulatory (inhibitor) subunit 11, the HZFW1 gene for HZFW1 protein, the TRIM31, TRIM40 and TRIM10 genes for tripartite motif-containing 31,40 and 10 and four CpG islands, complete sequence Length = 144169 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 110023 accaacccatccccatgcccacca 110046
>emb|AL669914.2| Human DNA sequence from clone XXbac-250I8 on chromosome 6 contains a major histocompatibility complex, class I, J pseudogene, the gene for HCGVIII protein, the genes for HTEX4, 4.3 and 6, a eukaryotic translation termination factor 1 (ETF1) pseudogene, the ZNRD1 gene for zinc ribbon domain containing, 1 , the PPP1R11 gene for protein phosphatase 1, regulatory (inhibitor) subunit 11, the HZFW1 gene for HZFW1 protein, the TRIM31 gene for tripartite motif containing 31, the TRIM40 gene for tripartite morif-containing 40, the TRIM10 gene for tripartite motif containing 10, the 5' end of the TRIM15 gene for tripartite motif-containing 15 and five CpG islands, complete sequence Length = 159178 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 125024 accaacccatccccatgcccacca 125047
>emb|AL391819.6| Human DNA sequence from clone RP11-8L13 on chromosome 9 Contains the 5' end of the TRPM3 gene for transient receptor potential cation channel subfamily M, member 3 (MLSN2, LTRPC3, FLJ11726) and a CpG island, complete sequence Length = 161802 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 aggagccggcggaggcaaag 377 |||||||||||||||||||| Sbjct: 138600 aggagccggcggaggcaaag 138581
>emb|AL356957.27| Human DNA sequence from clone RP11-403I13 on chromosome 1 Contains the 5' end of a novel pseudogene, a profilin 1 (PFN1) pseudogene, six novel genes and a novel pseudogene, complete sequence Length = 204702 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggagacggtgggcttctt 286 |||||||||||||||||||| Sbjct: 38643 gcggagacggtgggcttctt 38662
>emb|AL137000.6| Human DNA sequence from clone RP11-203I16 on chromosome 13 Contains the gene for KIAA0970 protein, the COX7CP1 cytochrome c oxidase subunit VIIc pseudogene 1, a novel pseudogene, the GPR38 gene for G protein-coupled receptor 38 and a CpG island, complete sequence Length = 163284 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cgcgggcgtcaccgccgtccccgc 124 |||||||| ||||||||||||||| Sbjct: 144979 cgcgggcgccaccgccgtccccgc 145002
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gcccgaggagatcccgccgg 522 |||||||||||||||||||| Sbjct: 100414 gcccgaggagatcccgccgg 100395
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggagccggcggaggcaaagc 378 |||||||||||||||||||| Sbjct: 47101 ggagccggcggaggcaaagc 47120
>emb|CR381570.12| Zebrafish DNA sequence from clone CH211-74M13 in linkage group 10, complete sequence Length = 151591 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cggtgggcttcttccaggtg 293 |||||||||||||||||||| Sbjct: 10782 cggtgggcttcttccaggtg 10801
>emb|CR925727.3| Human DNA sequence from clone DAAP-112O13 on chromosome 6, complete sequence Length = 23511 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 20703 accaacccatccccatgcccacca 20726
>emb|CR753815.3| Human DNA sequence from clone DADB-28I23 on chromosome 6, complete sequence Length = 78932 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 47770 accaacccatccccatgcccacca 47793
>ref|NM_204952.1| Gallus gallus forkhead box D2 (FOXD2), mRNA Length = 1708 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 981 gccccggagccgccgccgcc 962
>emb|CR759838.4| Human DNA sequence from clone DAMC-72C9 on chromosome 6, complete sequence Length = 104924 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 22029 accaacccatccccatgcccacca 22052
>gb|AC022046.11| Homo sapiens chromosome , clone RP11-13L22, complete sequence Length = 169553 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 cccggagccgccgccgcccg 507 |||||||||||||||||||| Sbjct: 125673 cccggagccgccgccgcccg 125692
>dbj|D89013.1| Homo sapiens DAN gene, complete cds Length = 19874 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gccgggaccctggccggcgc 410 |||||||||||||||||||| Sbjct: 2145 gccgggaccctggccggcgc 2126
>gb|AC060226.39| Homo sapiens 12 BAC RP11-101P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132604 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 63101 gccccggagccgccgccgcc 63120
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 gcgggcggccagctggcgcgacac 469 ||||||||||||| |||||||||| Sbjct: 4627598 gcgggcggccagcaggcgcgacac 4627575
>dbj|AB219523.1| Pseudomonas aeruginosa MexMN operon (mexM, mexN), complete cds Length = 4855 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ccgggaccctggccggcgcg 411 |||||||||||||||||||| Sbjct: 157 ccgggaccctggccggcgcg 138
>emb|BX927221.6| Human DNA sequence from clone DAMA-361I19 on chromosome 6, complete sequence Length = 73009 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 7916 accaacccatccccatgcccacca 7939
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 ggccttcgacgacaccaaggccggcgtc 86 |||||||| ||||||||||| ||||||| Sbjct: 4241084 ggccttcgccgacaccaaggtcggcgtc 4241057
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 ggagccgccgccgcccgagg 510 |||||||||||||||||||| Sbjct: 6810523 ggagccgccgccgcccgagg 6810542
>gb|AC131009.7| Homo sapiens 12 BAC RP11-417L19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170327 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ggccccggagccgccgccgc 504 |||||||||||||||||||| Sbjct: 45716 ggccccggagccgccgccgc 45697
>gb|AY935713.1| Spinacia oleracea gibberellin 2-oxidase 3 mRNA, complete cds Length = 1242 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaaccacggc 305 |||||||| ||||||||||||||| Sbjct: 371 ttcttccaagtggtgaaccacggc 394
>gb|DQ324114.1| Lolium temulentum gibberellin 2-oxidase mRNA, complete cds Length = 1023 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtggtgaaccacggcgtgcc 310 |||||||||||||||||||| Sbjct: 160 gtggtgaaccacggcgtgcc 179
>gb|AC020917.4|AC020917 Homo sapiens chromosome 19 clone CTD-2013N17, complete sequence Length = 151088 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 12168 gccccggagccgccgccgcc 12187
>gb|AE004573.1| Pseudomonas aeruginosa PAO1, section 134 of 529 of the complete genome Length = 10549 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ccgggaccctggccggcgcg 411 |||||||||||||||||||| Sbjct: 3066 ccgggaccctggccggcgcg 3047
>gb|BC035342.1| Homo sapiens, Similar to Kruppel-like factor 2 (lung), clone IMAGE:5181011, mRNA, partial cds Length = 757 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 266 gccccggagccgccgccgcc 285
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 1811741 accaacccatccccatgcccacca 1811718
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggtcggcgcggtgacggcgg 264 |||||||||||||||||||| Sbjct: 23641 ggtcggcgcggtgacggcgg 23660
>gb|AC158191.2| Selaginella moellendorffii clone JGIASXY-5N22, complete sequence Length = 30068 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggc 305 |||||||||||||||| | ||||||||| Sbjct: 22354 gggcttcttccaggtgattaaccacggc 22381
>gb|AF205849.1|AF205849 Homo sapiens Kruppel-like factor mRNA, complete cds Length = 1647 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 265 gccccggagccgccgccgcc 284
>gb|BC071983.1| Homo sapiens Kruppel-like factor 2 (lung), mRNA (cDNA clone MGC:88680 IMAGE:5480246), complete cds Length = 1685 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 268 gccccggagccgccgccgcc 287
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tggacgcgggcgtcaccgcc 116 |||||||||||||||||||| Sbjct: 1309647 tggacgcgggcgtcaccgcc 1309628
>dbj|AK060699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F06, full insert sequence Length = 2147 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ggtcggcgcggtgacggcgg 264 |||||||||||||||||||| Sbjct: 205 ggtcggcgcggtgacggcgg 186
>gb|AF134053.1|AF134053 Homo sapiens Kruppel-like factor LKLF mRNA, complete cds Length = 1600 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 181 gccccggagccgccgccgcc 200
>gb|AF123344.1|AF123344 Homo sapiens Kruppel-like zinc finger transcription factor gene, complete cds Length = 3017 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 806 gccccggagccgccgccgcc 825
>gb|AF079588.1|AF079588 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA, complete cds Length = 1444 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 gggcttcttccaggtggtgaaccacggc 305 ||||||||||||| | |||||||||||| Sbjct: 240 gggcttcttccagctcgtgaaccacggc 267
>dbj|AP001885.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-157K17, complete sequence Length = 173052 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 119980 gccccggagccgccgccgcc 119961
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gccgccgccgcccgaggaga 513 |||||||||||||||||||| Sbjct: 911731 gccgccgccgcccgaggaga 911712 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cggcgcggtgacggcggccgcggagacg 275 ||||||||||||||||| ||||| |||| Sbjct: 76522 cggcgcggtgacggcggtcgcggcgacg 76549
>gb|U37272.1|GGU37272 Gallus gallus winged helix protein CWH-1 mRNA, complete cds Length = 1708 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 gccccggagccgccgccgcc 505 |||||||||||||||||||| Sbjct: 981 gccccggagccgccgccgcc 962
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 ggagccgccgccgcccgagg 510 |||||||||||||||||||| Sbjct: 6810402 ggagccgccgccgcccgagg 6810421
>gb|AC004202.1|AC004202 Homo sapiens clone UWGC:y2c224 from 6p21, complete sequence Length = 42074 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 12959 accaacccatccccatgcccacca 12936
>gb|AF034632.1|AF034632 Homo sapiens orphan G protein-coupled receptor (GPR38) gene, complete cds Length = 2040 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cgcgggcgtcaccgccgtccccgc 124 |||||||| ||||||||||||||| Sbjct: 632 cgcgggcgccaccgccgtccccgc 655
>emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427_C06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 88558 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 ggagccgccgccgcccgagg 510 |||||||||||||||||||| Sbjct: 8005 ggagccgccgccgcccgagg 7986
>gb|U41315.1|HSU41315 Human ring zinc-finger protein (ZNF127-Xp) gene and 5' flanking sequence Length = 9358 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 agtcgcgggcggccagctgg 461 |||||||||||||||||||| Sbjct: 3627 agtcgcgggcggccagctgg 3646
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cggcgtgcaggcgtgtggcg 539 |||||||||||||||||||| Sbjct: 2431146 cggcgtgcaggcgtgtggcg 2431127
>gb|M62380.1|DINCARSR Carnation senescence related protein RNA, complete cds Length = 1250 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaacca 301 |||||||||||||||||||| Sbjct: 154 ttcttccaggtggtgaacca 173
>gb|L35152.1|DINACCA Dianthus caryophyllus amino-cyclopropane carboxylic acid oxidase mRNA, complete cds Length = 1156 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ttcttccaggtggtgaacca 301 |||||||||||||||||||| Sbjct: 167 ttcttccaggtggtgaacca 186
>dbj|AB023055.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:904J21, complete sequence Length = 162383 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 105162 accaacccatccccatgcccacca 105139
>dbj|AB023054.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:679G22, complete sequence Length = 162383 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 accaacccatccccatggccacca 184 ||||||||||||||||| |||||| Sbjct: 105162 accaacccatccccatgcccacca 105139 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,648,129 Number of Sequences: 3902068 Number of extensions: 3648129 Number of successful extensions: 80993 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76905 Number of HSP's gapped (non-prelim): 4076 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
