ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart35g09 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_ECOLI (P00722) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1023 Score = 172 bits (437), Expect = 5e-43 Identities = 83/149 (55%), Positives = 106/149 (71%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 VENPKLWS+E P+LY VV L A+G LI+ E+C VG R V + + +L+NG P++IRGV Sbjct: 295 VENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGV 354 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRHEHHP G+ E M++D++LM+QNN NAVR SHYP HP WY LCD +GLYV+DEAN Sbjct: 355 NRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN 414 Query: 489 IETHGFDETSHFKHPTLEPIWANSMLDRV 575 IETHG + T +P W +M +RV Sbjct: 415 IETHGMVPMNRL---TDDPRWLPAMSERV 440
>BGAL_PSEHA (P81650) Beta-galactosidase (EC 3.2.1.23) (Lactase)| (Beta-D-galactoside galactohydrolase) Length = 1038 Score = 157 bits (398), Expect = 2e-38 Identities = 74/148 (50%), Positives = 96/148 (64%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 + +PK W++E P LY VV L D G +D E+ +G R V + + Q+ VNG P++IRGV Sbjct: 293 IRSPKKWTAETPYLYRCVVSLLDEQGNTVDVEAYNIGFRKVEMLNGQLCVNGKPLLIRGV 352 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRHEHHP G A MI+D+ LM+QNN NAVR +HYP HP +YELCD GLYV+DEAN Sbjct: 353 NRHEHHPENGHAVSTADMIEDIKLMKQNNFNAVRTAHYPNHPLFYELCDELGLYVVDEAN 412 Query: 489 IETHGFDETSHFKHPTLEPIWANSMLDR 572 IETHG +P+WA + + R Sbjct: 413 IETHGMFPMGRL---ASDPLWAGAFMSR 437
>BGAL_ENTCL (Q47077) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1028 Score = 156 bits (395), Expect = 3e-38 Identities = 73/149 (48%), Positives = 101/149 (67%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 VE P LWS+E P+LY L + L + G++++ E+C VG R V +++ + +NG P++IRGV Sbjct: 297 VETPALWSAETPELYRLTMALLNPQGEVLEIEACDVGFRRVEISNGLLKLNGKPLLIRGV 356 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRHEHH G+ EA M +D+ M+Q++ NAVR SHYP HP WY+LCD +GLYV+DEAN Sbjct: 357 NRHEHHSENGQVMDEATMRRDIETMKQHSFNAVRCSHYPNHPLWYQLCDRYGLYVVDEAN 416 Query: 489 IETHGFDETSHFKHPTLEPIWANSMLDRV 575 IETHG S +P W +M +RV Sbjct: 417 IETHGMVPMSRLAD---DPRWLPAMSERV 442
>BGAL_LACLA (Q48727) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 998 Score = 149 bits (375), Expect = 7e-36 Identities = 76/163 (46%), Positives = 101/163 (61%) Frame = +3 Query: 87 GPCHGFHGYVLGGKVENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHK 266 G CHGF + V NPKLWS E P LY L + L D +G + E+ ++GIR + + Sbjct: 254 GECHGFDAEI---GVVNPKLWSDEIPYLYRLELTLMDRSGAVFHKETKKIGIRKIAIEKG 310 Query: 267 QMLVNGSPVVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYE 446 Q+ +NG +++RGVN+HE P G E MIKD+ LM+++N NAVR SHYP RWYE Sbjct: 311 QLKINGKALLVRGVNKHEFTPEHGYVVSEEVMIKDIKLMKEHNFNAVRCSHYPNDSRWYE 370 Query: 447 LCDIFGLYVIDEANIETHGFDETSHFKHPTLEPIWANSMLDRV 575 LCD +GLYV+DEANIETHG + T +P + M +RV Sbjct: 371 LCDEYGLYVMDEANIETHGMTPMNRL---TNDPTYLPLMSERV 410
>BGAL_BACME (O52847) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1034 Score = 147 bits (371), Expect = 2e-35 Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 5/153 (3%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 +++P WS+E P+LYTLV+ LK+A G +I+ ESC+VG R + + M +NG +V+RGV Sbjct: 307 IKSPAKWSAESPNLYTLVLSLKNAAGSIIETESCKVGFRTFEIKNGLMTINGKRIVLRGV 366 Query: 309 NRHEHHPRVGKTNL-EACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEA 485 NRHE G+ + MI D++LM+Q+NINAVR SHYP WYELC+ +GLYVIDE Sbjct: 367 NRHEFDSVKGRAGITREDMIHDILLMKQHNINAVRTSHYPNDSVWYELCNEYGLYVIDET 426 Query: 486 NIETHG----FDETSHFKHPTLEPIWANSMLDR 572 N+ETHG E P +P W ++LDR Sbjct: 427 NLETHGTWTYLQEGEQKAVPGSKPEWKENVLDR 459
>BGAL_KLEPN (P06219) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1034 Score = 141 bits (356), Expect = 1e-33 Identities = 70/149 (46%), Positives = 96/149 (64%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 V P WS+E P+ Y VV L + +L++ E+ +G R + +A + +NG P++IRGV Sbjct: 303 VATPAHWSAETPNCYRAVVTLWRGD-ELLEAEAWDIGFRRIEIADGLLRLNGKPLLIRGV 361 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRHEHH G+ EA M++D++LM+QNN NAVR SHYP PRWYELC+ +GLYV+DEAN Sbjct: 362 NRHEHHHLRGQVVTEADMVQDILLMKQNNFNAVRCSHYPNAPRWYELCNRYGLYVVDEAN 421 Query: 489 IETHGFDETSHFKHPTLEPIWANSMLDRV 575 IETHG + +P W + RV Sbjct: 422 IETHGMVPMNRLSD---DPAWLPAFSARV 447
>BGAL_STRTR (P23989) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1026 Score = 134 bits (337), Expect = 2e-31 Identities = 71/159 (44%), Positives = 99/159 (62%), Gaps = 7/159 (4%) Frame = +3 Query: 117 LGGKVENPKL--WSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSP 290 L +EN K+ WS+E P LY L++ + D + ++++ +VG R + K ML+NG Sbjct: 279 LSVSLENLKIKPWSAESPKLYDLILHVLD-DDQVVEVVPVKVGFRRFEIKDKLMLLNGKR 337 Query: 291 VVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLY 470 +V +GVNRHE + R G+ E M+ D+ +M+Q+NINAVR SHYP RWYELCD +GLY Sbjct: 338 IVFKGVNRHEFNARTGRCITEEDMLWDIKVMKQHNINAVRTSHYPNQTRWYELCDEYGLY 397 Query: 471 VIDEANIETHGFDE-----TSHFKHPTLEPIWANSMLDR 572 VIDEAN+ETHG + + P EP W + LDR Sbjct: 398 VIDEANLETHGTWQKLGLCEPSWNIPASEPEWLPACLDR 436
>BGAL_BACHD (Q9K9C6) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1014 Score = 134 bits (336), Expect = 2e-31 Identities = 65/141 (46%), Positives = 91/141 (64%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 V++P LWS+E P LY L + L D NG L++ ++G R L + M +NG +V +GV Sbjct: 286 VDSPALWSAEDPYLYKLFLKLFDENGTLVEVVPQKIGFRRFELVNNIMTLNGKRIVFKGV 345 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRHE + R G+ + M++D+ M+++NINAVR SHYP + WY+LCD +GLYVIDE N Sbjct: 346 NRHEFNGRTGRVVTKEDMLEDIKTMKKHNINAVRTSHYPNNSEWYQLCDEYGLYVIDEMN 405 Query: 489 IETHGFDETSHFKHPTLEPIW 551 +ETHG S K +EP W Sbjct: 406 LETHG----SWQKLGKVEPSW 422
>BGA2_ECOLI (P06864) Evolved beta-galactosidase alpha-subunit (EC 3.2.1.23)| (Lactase) Length = 1030 Score = 132 bits (332), Expect = 7e-31 Identities = 63/149 (42%), Positives = 95/149 (63%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 VE P+ WS+E P LY LV+ LKDANG +++ +VG R++ + +N V++ GV Sbjct: 280 VEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLHGV 339 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRH++ R G+ + KDL LM+Q+NIN+VR +HYP PR+YELCDI+GL+V+ E + Sbjct: 340 NRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETD 399 Query: 489 IETHGFDETSHFKHPTLEPIWANSMLDRV 575 +E+HGF T +P W ++R+ Sbjct: 400 VESHGFANVGDISRITDDPQWEKVYVERI 428
>BGAL_KLULA (P00723) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1025 Score = 127 bits (319), Expect = 2e-29 Identities = 63/138 (45%), Positives = 89/138 (64%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 V+ P+ W++E P LY + L ++G +I VG R V L + VNG ++ RGV Sbjct: 293 VKAPEHWTAENPTLYKYQLDLIGSDGSVIQSIKHHVGFRQVELKDGNITVNGKDILFRGV 352 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRH+HHPR G+ +++DL+LM++ NINAVRNSHYP HP+ Y+L D G +VIDEA+ Sbjct: 353 NRHDHHPRFGRAVPLDFVVRDLILMKKFNINAVRNSHYPNHPKVYDLFDKLGFWVIDEAD 412 Query: 489 IETHGFDETSHFKHPTLE 542 +ETHG E + +H LE Sbjct: 413 LETHGVQEPFN-RHTNLE 429
>BGAL_THEMA (Q56307) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1084 Score = 125 bits (315), Expect = 7e-29 Identities = 62/127 (48%), Positives = 80/127 (62%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGV 308 V++PK WS+E P LY L + L + K+ G R + + +L NG P+ I+GV Sbjct: 279 VKDPKKWSAETPHLYVLKLKLGEDEKKV------NFGFRKIEIKDGTLLFNGKPLYIKGV 332 Query: 309 NRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEAN 488 NRHE P G MI+D+ LM+Q+NIN VR SHYP +WY+LCD FGLYVIDEAN Sbjct: 333 NRHEFDPDRGHAVTVERMIQDIKLMKQHNINTVRTSHYPNQTKWYDLCDYFGLYVIDEAN 392 Query: 489 IETHGFD 509 IE+HG D Sbjct: 393 IESHGID 399
>BGAL_CLOAB (P24131) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 897 Score = 124 bits (310), Expect = 3e-28 Identities = 58/140 (41%), Positives = 89/140 (63%) Frame = +3 Query: 132 ENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVN 311 +N LWS+E+P+LYTL +L+ +G LI+ + ++G R+ + K M + ++ +GVN Sbjct: 286 QNINLWSAEEPNLYTLYILVNKKDGNLIEVVTQKIGFRHFEMKDKIMCLKWKRIIFKGVN 345 Query: 312 RHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANI 491 RHE R G++ + M+ D+ ++Q+NINAVR SHYP WY LCD +G+Y+IDE N+ Sbjct: 346 RHEFSARRGRSITKEDMLWDIKFLKQHNINAVRTSHYPNQSLWYRLCDEYGIYLIDETNL 405 Query: 492 ETHGFDETSHFKHPTLEPIW 551 E+HG S K +EP W Sbjct: 406 ESHG----SWQKMGQIEPSW 421
>BGAL_STAXY (O33815) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 994 Score = 120 bits (301), Expect = 3e-27 Identities = 70/171 (40%), Positives = 93/171 (54%), Gaps = 8/171 (4%) Frame = +3 Query: 15 SDDLNSDMSDANVV---NLKTKP----KPKGGPCHGFHGYVLGG-KVENPKLWSSEKPDL 170 SDDLN+ D + NLK+ PKG G V NP LWS+E P L Sbjct: 222 SDDLNAAQIDVKIERAHNLKSVEFQLYNPKGEEVASISGVNEHQFDVHNPHLWSTENPVL 281 Query: 171 YTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRHEHHPRVGKTNL 350 YTL +L + + +VGIR V + + Q +NG + IRG N H+ HP G Sbjct: 282 YTLYILTDQ------EVITQKVGIREVAIQNNQFYINGQSIKIRGTNYHDSHPETGYVMT 335 Query: 351 EACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANIETHG 503 E+ KDL LM+Q N NA+R +HYP+ P +YE+ D +G YV+ EA+IETHG Sbjct: 336 ESHFKKDLELMKQGNFNAIRTAHYPKSPLFYEMTDQYGFYVMSEADIETHG 386
>BGAL_LACDE (P20043) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1006 Score = 117 bits (292), Expect = 3e-26 Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 6/149 (4%) Frame = +3 Query: 147 WSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRHEHH 326 WS+EKP+LY + + L A G L++ +VG RN L M +NG +V +G NRHE Sbjct: 296 WSAEKPNLYQVRLYLYQA-GSLLEVSRQEVGFRNFELKDGIMYLNGQRIVFKGANRHEFD 354 Query: 327 PRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANIETHGF 506 ++G+ E MI D+ M+++NINAVR SHYP +Y LCD +GLYVIDEAN+E+HG Sbjct: 355 SKLGRAITEEDMIWDIKTMKRSNINAVRCSHYPNQSLFYRLCDKYGLYVIDEANLESHGT 414 Query: 507 ------DETSHFKHPTLEPIWANSMLDRV 575 E F P + W + L RV Sbjct: 415 WEKVGGHEDPSFNVPGDDQHWLGASLSRV 443
>BGAL_ARTSB (Q59140) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1015 Score = 110 bits (276), Expect = 2e-24 Identities = 57/143 (39%), Positives = 83/143 (58%) Frame = +3 Query: 147 WSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRHEHH 326 WS+E P LY V + S ++G R V + Q LVNG V+ GVNRHE + Sbjct: 277 WSAEVPRLYDASV------SSAAESISLRLGFRTVKIVGDQFLVNGRKVIFHGVNRHETN 330 Query: 327 PRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANIETHGF 506 G+ EA +DL LM++ N+NA+R SHYP HPR+ +L D G +VI E ++ETHGF Sbjct: 331 ADRGRVFDEASAREDLALMKRFNVNAIRTSHYPPHPRFLDLADELGFWVILECDLETHGF 390 Query: 507 DETSHFKHPTLEPIWANSMLDRV 575 +P+ +P W ++++DR+ Sbjct: 391 HALKWVGNPSDDPAWRDALVDRM 413
>BGAL_LACSK (Q48846) Beta-galactosidase large subunit (EC 3.2.1.23) (Lactase)| Length = 625 Score = 109 bits (273), Expect = 5e-24 Identities = 56/135 (41%), Positives = 79/135 (58%) Frame = +3 Query: 147 WSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRHEHH 326 WS++ P+LYTL + + D G+ I+ G R + + K ML+NG +VI GVNRHE H Sbjct: 297 WSNQTPNLYTLELEVVDQAGETIEISQQPFGFRKIEIKDKVMLLNGKRLVINGVNRHEWH 356 Query: 327 PRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANIETHGF 506 P G+T D+ M++N+INAVR SHYP +Y CD G+Y++ E N+E+HG Sbjct: 357 PETGRTITAEDEAWDIACMQRNHINAVRTSHYPDRLSFYNGCDQAGIYMMAETNLESHG- 415 Query: 507 DETSHFKHPTLEPIW 551 S K +EP W Sbjct: 416 ---SWQKMGAVEPSW 427
>BGAL_LACAC (O07684) Beta-galactosidase large subunit (EC 3.2.1.23) (Lactase)| Length = 628 Score = 107 bits (266), Expect = 3e-23 Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 6/154 (3%) Frame = +3 Query: 129 VENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAH-KQMLVNGSPVVIRG 305 +EN LW + P LY L++ + D NG L++ Q G R + + K +L+NG ++I G Sbjct: 293 LENIHLWDNHHPYLYQLLIEVHDENGHLVELIPYQFGFRRIEINQDKVILLNGKCLIING 352 Query: 306 VNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEA 485 VNRHE + + G++ M KD+ ++NNINAVR HYP WY LCD G+Y++ E Sbjct: 353 VNRHEWNAKTGRSITLNDMEKDIDTFKENNINAVRTCHYPNQIPWYYLCDQNGIYMMAEN 412 Query: 486 NIETHGFDETSHFKHPT-----LEPIWANSMLDR 572 N+E+HG + P+ P W +++DR Sbjct: 413 NLESHGTWQKMGQVEPSDNVPGSVPEWREAVIDR 446
>BGAL_ACTPL (P70753) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1005 Score = 105 bits (262), Expect = 9e-23 Identities = 53/126 (42%), Positives = 80/126 (63%) Frame = +3 Query: 126 KVENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRG 305 +VE+ +LW++EKP LYTL+ L A ++ ++G R V + +L N P+ +G Sbjct: 264 EVEDIQLWNAEKPQLYTLI--LHTAEEVIVQ----KIGFRKVEIKDGILLFNQQPIKFKG 317 Query: 306 VNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEA 485 VNRH+ P+ G A KDL LM+Q+NINA+R +HYP P + ELCD +G Y+I E+ Sbjct: 318 VNRHDSDPKTGYAITYAQAHKDLQLMKQHNINAIRTAHYPNAPWFSELCDQYGFYLIGES 377 Query: 486 NIETHG 503 ++E+HG Sbjct: 378 DVESHG 383
>BGAL_LACHE (Q7WTB4) Beta-galactosidase large subunit (EC 3.2.1.23) (Lactase)| Length = 628 Score = 103 bits (257), Expect = 4e-22 Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 6/155 (3%) Frame = +3 Query: 126 KVENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLA-HKQMLVNGSPVVIR 302 K EN LW++ P LY L++ + D L++ Q G R + ++ K +L+NG ++I Sbjct: 292 KFENVHLWNNHDPYLYQLLIEVYDEQQNLLELIPFQFGFRRIEISPEKVVLLNGKRLIIN 351 Query: 303 GVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDE 482 GVNRHE + G++ + M D+ ++NNINAVR HYP WY LCD G+YV+ E Sbjct: 352 GVNRHEWDAKRGRSITMSDMTTDINTFKENNINAVRTCHYPNQIPWYYLCDQNGIYVMAE 411 Query: 483 ANIETHGFDETSHFKHPTLE-----PIWANSMLDR 572 N+E+HG + P+ P W +++DR Sbjct: 412 NNLESHGTWQKMGEIEPSDNVPGSIPQWKEAVIDR 446
>BGAL_LEULA (Q02603) Beta-galactosidase large subunit (EC 3.2.1.23) (Lactase)| Length = 626 Score = 100 bits (248), Expect = 4e-21 Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 6/149 (4%) Frame = +3 Query: 144 LWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQML-VNGSPVVIRGVNRHE 320 LWS + P LY L + + DA+ +L++ Q G R V L +++ VN +VI GVNRHE Sbjct: 296 LWSPQTPYLYQLTIEVYDADHQLLEVVPYQFGFRTVELRDDKVIYVNNKRLVINGVNRHE 355 Query: 321 HHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANIETH 500 + G+ A M D+ M NNINA R HYP WY+LCD G+Y++ E N+E+H Sbjct: 356 WNAHTGRVISMADMRADIQTMLANNINADRTCHYPDQLPWYQLCDEAGIYLMAETNLESH 415 Query: 501 GFDE-----TSHFKHPTLEPIWANSMLDR 572 G + + P P W +++DR Sbjct: 416 GSWQKMGAIEPSYNVPGDNPHWPAAVIDR 444
>BGLR_PIG (Q4FAT7) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 652 Score = 77.4 bits (189), Expect = 3e-14 Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 2/118 (1%) Frame = +3 Query: 138 PKLWSSEKPDLYTLVVLL--KDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVN 311 P L LY+L V L + + G L D + VGIR V + +Q L+NG P GVN Sbjct: 290 PYLMHERPAYLYSLEVKLTAQTSAGPLSDFYTLPVGIRTVAVTERQFLINGKPFYFHGVN 349 Query: 312 RHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEA 485 +HE GK + ++KD L+R NA R SHYP +LCD +G+ VIDE+ Sbjct: 350 KHEDADIRGKGFDWSLLVKDFNLLRWLGANAFRTSHYPYAEEVMQLCDRYGIVVIDES 407
>BGLR_FELCA (O97524) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 651 Score = 76.3 bits (186), Expect = 6e-14 Identities = 50/127 (39%), Positives = 65/127 (51%), Gaps = 7/127 (5%) Frame = +3 Query: 126 KVENPKLW----SSEKPD-LYTLVVLL--KDANGKLIDCESCQVGIRNVVLAHKQMLVNG 284 +V N LW E P LY+L V L + A G + D + VGIR V + Q L+NG Sbjct: 280 QVPNAHLWWPYLMHEHPAYLYSLEVRLTAQTAAGSVSDFYTLPVGIRTVAVTEHQFLING 339 Query: 285 SPVVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFG 464 P GVN+HE GK ++KD L+R NA R SHYP +LCD +G Sbjct: 340 KPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQLCDRYG 399 Query: 465 LYVIDEA 485 + VIDE+ Sbjct: 400 IVVIDES 406
>BGLR_CANFA (O18835) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 651 Score = 75.9 bits (185), Expect = 8e-14 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 2/118 (1%) Frame = +3 Query: 138 PKLWSSEKPDLYTLVVLL--KDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVN 311 P L LY+L V L + A G + D + VGIR V + +Q L+NG P GVN Sbjct: 289 PYLMHEHPAYLYSLEVRLTAQMAAGPVSDFYTLPVGIRTVAVTERQFLINGKPFYFHGVN 348 Query: 312 RHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEA 485 +HE GK ++KD L+R NA R SHYP +LCD +G+ VIDE+ Sbjct: 349 KHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQLCDRYGIVVIDES 406
>BGLR_CERAE (O77695) Beta-glucuronidase precursor (EC 3.2.1.31) (Fragment)| Length = 648 Score = 75.1 bits (183), Expect = 1e-13 Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 7/126 (5%) Frame = +3 Query: 126 KVENPKLW----SSEKPD-LYTLVVLL--KDANGKLIDCESCQVGIRNVVLAHKQMLVNG 284 KV +LW E+P LY+L V L + + G + D + VGIR V + Q L+NG Sbjct: 278 KVPGARLWWPYLMHERPAYLYSLEVRLTAQTSLGPVSDFYTLPVGIRTVAVTESQFLING 337 Query: 285 SPVVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFG 464 P GVN+HE GK ++KD L+R NA R SHYP ++CD +G Sbjct: 338 KPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVLQMCDRYG 397 Query: 465 LYVIDE 482 + VIDE Sbjct: 398 IVVIDE 403
>BGLR_PONPY (Q5R5N6) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 651 Score = 73.9 bits (180), Expect = 3e-13 Identities = 49/126 (38%), Positives = 63/126 (50%), Gaps = 7/126 (5%) Frame = +3 Query: 126 KVENPKLW----SSEKPD-LYTLVVLL--KDANGKLIDCESCQVGIRNVVLAHKQMLVNG 284 KV LW E+P LY+L V L + + G + D S VGIR V + Q L+NG Sbjct: 281 KVPGASLWWPYLMHERPAYLYSLEVRLTAQTSLGPVSDFYSLPVGIRTVAVTESQFLING 340 Query: 285 SPVVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFG 464 P GVN+HE GK ++KD L+R NA R SHYP ++CD G Sbjct: 341 KPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVLQMCDRHG 400 Query: 465 LYVIDE 482 + VIDE Sbjct: 401 IVVIDE 406
>BGLR_HUMAN (P08236) Beta-glucuronidase precursor (EC 3.2.1.31) (Beta-G1)| Length = 651 Score = 73.6 bits (179), Expect = 4e-13 Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 7/126 (5%) Frame = +3 Query: 126 KVENPKLW----SSEKPD-LYTLVVLL--KDANGKLIDCESCQVGIRNVVLAHKQMLVNG 284 KV LW E+P LY+L V L + + G + D + VGIR V + Q L+NG Sbjct: 281 KVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLING 340 Query: 285 SPVVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFG 464 P GVN+HE GK ++KD L+R NA R SHYP ++CD +G Sbjct: 341 KPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYG 400 Query: 465 LYVIDE 482 + VIDE Sbjct: 401 IVVIDE 406
>BGAL_THEET (P77989) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 743 Score = 70.5 bits (171), Expect = 3e-12 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 3/132 (2%) Frame = +3 Query: 126 KVENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHK--QMLVNGSPVVI 299 K++NP W + P LY + V L A +++D + + GI+ V + +NG P+ + Sbjct: 226 KMDNPLTWHPDHPYLYNVSVKLI-AENEILDNYTFKTGIKGTVEFRDDGKFYINGEPLKL 284 Query: 300 RGVNRHEHHPRVGKTNLEACMIKDL-VLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVI 476 RG+NRH+ P VG + KD +L + +N VR SHYPQ + + CD G+ V Sbjct: 285 RGLNRHQTFPYVGGAMPDRVQRKDADILKYELGLNYVRTSHYPQAVSFLDRCDEIGMLVF 344 Query: 477 DEANIETHGFDE 512 +E H DE Sbjct: 345 EEIPGWQHIGDE 356
>BGLR_RAT (P06760) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 648 Score = 68.9 bits (167), Expect = 1e-11 Identities = 41/115 (35%), Positives = 57/115 (49%) Frame = +3 Query: 138 PKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRH 317 P L LY+L V + + D + VGIR V + + L+NG P +GVN+H Sbjct: 289 PYLMHEHPAYLYSLEVTMTTPES-VSDFYTLPVGIRTVAVTKSKFLINGKPFYFQGVNKH 347 Query: 318 EHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDE 482 E G+ +IKD L+R N+ R SHYP +LCD +G+ VIDE Sbjct: 348 EDSDIRGRGFDWPLLIKDFNLLRWLGANSFRTSHYPYSEEVLQLCDRYGIVVIDE 402
>BGLR_MOUSE (P12265) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 648 Score = 68.9 bits (167), Expect = 1e-11 Identities = 40/115 (34%), Positives = 57/115 (49%) Frame = +3 Query: 138 PKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRH 317 P L +Y+L V + + D + VGIR V + + L+NG P +GVN+H Sbjct: 289 PYLMHEHPAYMYSLEVKVTTTES-VTDYYTLPVGIRTVAVTKSKFLINGKPFYFQGVNKH 347 Query: 318 EHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDE 482 E GK ++KD L+R N+ R SHYP +LCD +G+ VIDE Sbjct: 348 EDSDIRGKGFDWPLLVKDFNLLRWLGANSFRTSHYPYSEEVLQLCDRYGIVVIDE 402
>BGAL_THETU (P26257) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 716 Score = 67.8 bits (164), Expect = 2e-11 Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Frame = +3 Query: 141 KLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRHE 320 KLW + P+LY + V +K N D + G R V +NG + +RG+NRH+ Sbjct: 235 KLWDVDNPNLYEIKVGMKINN--FSDEYDNKFGFREAVFKPDGFYLNGRKLKLRGLNRHQ 292 Query: 321 HHPRVGKTNLEACMIKDL-VLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDE 482 +P VG KD +L + ++N VR SHYPQ + CD GL V +E Sbjct: 293 SYPYVGYAMPRRVQEKDAEILKNELHLNIVRTSHYPQSKHFLNKCDELGLLVFEE 347
>BGLR_ECOLI (P05804) Beta-glucuronidase (EC 3.2.1.31) (GUS)| (Beta-D-glucuronoside glucuronosohydrolase) Length = 603 Score = 64.7 bits (156), Expect = 2e-10 Identities = 42/119 (35%), Positives = 53/119 (44%) Frame = +3 Query: 126 KVENPKLWSSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRG 305 +V NP LW + LY L V K D +VGIR+V + +Q L+N P G Sbjct: 235 QVVNPHLWQPGEGYLYELCVTAKSQTE--CDIYPLRVGIRSVAVKGEQFLINHKPFYFTG 292 Query: 306 VNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDE 482 RHE GK M+ D LM N+ R SHYP + D G+ VIDE Sbjct: 293 FGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDE 351
>BGAL_RHIME (Q59750) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 755 Score = 52.0 bits (123), Expect = 1e-06 Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Frame = +3 Query: 144 LWSSEKPDLYTLVVLLKDANG--------KLIDCESCQVGIRNVVLAHKQMLVNGSPVVI 299 LW + P LY + V L+ G +L E G R +NG P+ I Sbjct: 226 LWDIDDPVLYVIEVELRTGQGFRLLRRAFRLPHGEFTTEGFR----------LNGRPLKI 275 Query: 300 RGVNRHEHHP----RVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYELCDIFGL 467 RG+NRH+ P R+G+T + D++ + + N VR SHYPQ + + CD GL Sbjct: 276 RGLNRHQSFPYVGLRMGRT-AKGSAHADIMNAHRLHCNLVRTSHYPQSKWFLDHCDRIGL 334 Query: 468 YV 473 V Sbjct: 335 LV 336
>DPOG1_XENLA (Q91684) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial| DNA polymerase catalytic subunit) Length = 1200 Score = 34.7 bits (78), Expect = 0.20 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +3 Query: 312 RHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWY-ELC 452 + E P +GK LE +K L L+ + RN H P HP WY +LC Sbjct: 508 KEESRPSMGKLYLEDLKLKTLPLLPK------RNQHLPGHPGWYRKLC 549
>EBM_ARATH (Q75W54) Mannosylglycoprotein endo-beta-mannosidase (EC 3.2.1.152)| (Endo-beta-mannosidase) (AtEBM) [Contains: Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Mannosylglycopro Length = 943 Score = 33.1 bits (74), Expect = 0.58 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 13/128 (10%) Frame = +3 Query: 138 PKLW---SSEKPDLYTLVVLLKDANGKLIDCESCQVGIRNV------VLAHKQMLVNGSP 290 P+LW K +LY +++ + D G R + V + +NG P Sbjct: 289 PELWWPNGMGKQNLYDILITVVVNEFGESDSWMQPFGFRKIESVIDSVTGGRLFKINGEP 348 Query: 291 VVIRGVN--RHEHHPRVGKTNLEACMIKDLVLMRQNNINAVR--NSHYPQHPRWYELCDI 458 + IRG N + R+ K D+ N+N +R + P +Y CDI Sbjct: 349 IFIRGGNWILSDGLLRLSKERYRT----DIKFHADMNMNMIRCWGGGLAERPEFYHFCDI 404 Query: 459 FGLYVIDE 482 +GL V E Sbjct: 405 YGLLVWQE 412
>NPM3_HUMAN (O75607) Nucleoplasmin-3| Length = 177 Score = 30.4 bits (67), Expect = 3.8 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = -2 Query: 229 HDSQSISFPLASLRRTTRVYKSGFSLDQSFGFSTFPPRT*P*KPWQGPPLGFGFVFKLTT 50 HD Q I+ P+A+L+ + + SLD F PP T K GP G ++ T Sbjct: 88 HDHQEIAVPVANLKLSCQPM---LSLDD---FQLQPPVTFRLKSGSGPVRITG-RHQIVT 140 Query: 49 LASDISEFKSSDDSE 5 +++D+SE +S ++ E Sbjct: 141 MSNDVSEEESEEEEE 155
>NPM3_MOUSE (Q9CPP0) Nucleoplasmin-3| Length = 174 Score = 30.4 bits (67), Expect = 3.8 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = -2 Query: 229 HDSQSISFPLASLRRTTRVYKSGFSLDQSFGFSTFPPRT*P*KPWQGPPLGFGFVFKLTT 50 HD+Q I+ P+A+LR + + S+D F PP T K GP G ++ Sbjct: 88 HDNQEIAVPVANLRLSCQPM---LSVDD---FQLQPPVTFRLKSGSGPVRITG-RHQIVC 140 Query: 49 LASDISEFKSSDDSE 5 + +D+SE +S D+SE Sbjct: 141 INNDLSEEESDDESE 155
>NPM3_PONPY (Q5RC37) Nucleoplasmin-3| Length = 179 Score = 30.4 bits (67), Expect = 3.8 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = -2 Query: 229 HDSQSISFPLASLRRTTRVYKSGFSLDQSFGFSTFPPRT*P*KPWQGPPLGFGFVFKLTT 50 HD Q I+ P+A+L+ + + SLD F PP T K GP G ++ T Sbjct: 88 HDHQEIAVPVANLKLSCQPM---LSLDD---FQLQPPVTFRLKSGSGPVRITG-RHQIVT 140 Query: 49 LASDISEFKSSDDSE 5 +++D+SE +S ++ E Sbjct: 141 MSNDVSEEESEEEEE 155
>DPOL_NPVBM (P41712) DNA polymerase (EC 2.7.7.7)| Length = 986 Score = 29.3 bits (64), Expect = 8.4 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 16/161 (9%) Frame = +3 Query: 15 SDDLNSDMSDANVVNLKTKPKP---------KGGPCHGFHGYVLGGKVENPK------LW 149 S N+D + A + NLK K P GP + Y GGKV P+ + Sbjct: 469 SGQFNADKATAGISNLKRKLTPLKNIPKDAINLGPANQTVKY-KGGKVLQPRASIYKNAF 527 Query: 150 SSEKPDLY-TLVVLLKDANGKLIDCESCQVGIRNVVLAHKQMLVNGSPVVIRGVNRHEHH 326 S + LY T+++ + L+ CE NV L H + ++++ ++ Sbjct: 528 SLDFNSLYLTIMIAICACLSNLVLCED-----GNVYLNHNSRAI-VVKLLLKLLSERCKF 581 Query: 327 PRVGKTNLEACMIKDLVLMRQNNINAVRNSHYPQHPRWYEL 449 + E+ + DL +QN++ NS Y + +Y++ Sbjct: 582 KKNRDNQSESAFLYDLYDQKQNSVKRTANSIYGYYGIFYKV 622 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,891,979 Number of Sequences: 219361 Number of extensions: 1974396 Number of successful extensions: 4312 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4191 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4296 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
