ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart35g07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 Score = 636 bits (321), Expect = e-179 Identities = 381/401 (95%) Strand = Plus / Plus Query: 3 aggagaaggagcaggcggcggaggtgcccgaagaggagaagcacggcgacctagcccgag 62 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct: 27 aggagaaggagcaggcggcggcggtgcgcgaagagaagaagcacggcgacctagcccgag 86 Query: 63 ctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcat 122 || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 87 cttgcaaccatggcgaggggtttgaagaagcatctcaagaggctcaatgccccgtctcac 146 Query: 123 tggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tggatgctggacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 206 Query: 183 gccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacg 242 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 207 gccagggagtgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacc 266 Query: 243 gaccgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgc 302 |||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||| Sbjct: 267 taccgtgaagtgcaatctatcctgatgcagcgtcacatcatggttgatggaaaggtccga 326 Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 327 actgacaagacctaccctgctggtttcatggatatcatttccattcccaagactggtgag 386 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccgcct 403 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 aactacaggcttctgtatgacaccaagggccgcttccgcct 427
>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full insert sequence Length = 1016 Score = 375 bits (189), Expect = e-101 Identities = 321/365 (87%) Strand = Plus / Plus Query: 42 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 101 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 66 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 125 Query: 102 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 161 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 126 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 185 Query: 162 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 221 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 186 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 245 Query: 222 agactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcagcgtcatatt 281 || || || || ||||| || ||||||| || |||||||| |||||||| ||| | Sbjct: 246 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 305 Query: 282 atggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 341 ||| |||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 306 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 365 Query: 342 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 401 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 366 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 425 Query: 402 cttca 406 ||||| Sbjct: 426 cttca 430
>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full insert sequence Length = 1157 Score = 375 bits (189), Expect = e-101 Identities = 321/365 (87%) Strand = Plus / Plus Query: 42 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 101 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 70 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 129 Query: 102 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 161 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 130 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 189 Query: 162 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 221 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 190 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 249 Query: 222 agactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcagcgtcatatt 281 || || || || ||||| || ||||||| || |||||||| |||||||| ||| | Sbjct: 250 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 309 Query: 282 atggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 341 ||| |||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 310 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 369 Query: 342 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 401 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 370 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 429 Query: 402 cttca 406 ||||| Sbjct: 430 cttca 434
>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full insert sequence Length = 1079 Score = 375 bits (189), Expect = e-101 Identities = 321/365 (87%) Strand = Plus / Plus Query: 42 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 101 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 62 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 121 Query: 102 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 161 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 181 Query: 162 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 221 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 182 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 241 Query: 222 agactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcagcgtcatatt 281 || || || || ||||| || ||||||| || |||||||| |||||||| ||| | Sbjct: 242 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 301 Query: 282 atggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 341 ||| |||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 302 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 361 Query: 342 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 401 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 362 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 421 Query: 402 cttca 406 ||||| Sbjct: 422 cttca 426
>emb|Y15009.1|OSY15009 Oryza sativa mRNA for ribosomal protein S4 Length = 1148 Score = 367 bits (185), Expect = 2e-98 Identities = 320/365 (87%) Strand = Plus / Plus Query: 42 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 101 ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 36 agcacggtgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 95 Query: 102 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 161 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 155 Query: 162 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 221 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 156 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 215 Query: 222 agactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcagcgtcatatt 281 || || || || ||||| || ||||||| || |||||||| |||||||| ||| | Sbjct: 216 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 275 Query: 282 atggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 341 ||| |||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 276 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 335 Query: 342 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 401 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 336 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 395 Query: 402 cttca 406 ||||| Sbjct: 396 cttca 400
>dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C06, full insert sequence Length = 1035 Score = 327 bits (165), Expect = 2e-86 Identities = 312/361 (86%) Strand = Plus / Plus Query: 46 cggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggc 105 ||||||| |||| |||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 62 cggcgacgtagctcgagctcgcaaccatggcgaggggattgaagaagcatctcaagaggc 121 Query: 106 tcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaagccat 165 ||||||| || || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 122 tcaatgcgcccaagcactggatgctcgacaagctcggcggagcttttgcccccaagccat 181 Query: 166 catctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagac 225 | ||||| ||||||||| |||||||||||||||| |||||||||||| | |||||||| Sbjct: 182 cgtctggacctcacaagtccagggaatgcctgcccctgatcctcatcatcaggaacaggt 241 Query: 226 tgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcagcgtcatattatgg 285 |||| || || || || ||||||| || |||||||| |||||||| ||| | ||| Sbjct: 242 tgaagtatgcgctgacataccgtgaggttatctctatcctgatgcagcggcatgtcttgg 301 Query: 286 ctgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatttcta 345 |||||| |||||| | |||||||||||||||||||||||||||||||| | ||||| | Sbjct: 302 ttgatgggaaggtcaggactgacaagacctaccctgctggtttcatggatgtgatttcca 361 Query: 346 ttcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgccttc 405 |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 362 ttccaaagactggtgagaactacaggcttctctatgacaccaagggtcgcttccgccttc 421 Query: 406 a 406 | Sbjct: 422 a 422
>ref|NM_193994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 768 Score = 291 bits (147), Expect = 9e-76 Identities = 288/335 (85%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| Sbjct: 1 atggcgaggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctc 60 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 191 |||||||| || ||||||||||||||||||||||| ||||| ||||||||| |||||||| Sbjct: 61 gacaagctcggcggagcttttgcccccaagccatcgtctggacctcacaagtccagggaa 120 Query: 192 tgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaa 251 |||||||| |||||||||||| | |||||||| |||| || || || || ||||||| Sbjct: 121 tgcctgcccctgatcctcatcatcaggaacaggttgaagtatgcgctgacataccgtgag 180 Query: 252 gtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaag 311 || |||||||| |||||||| ||| | ||| |||||| |||||| | ||||||||| Sbjct: 181 gttatctctatcctgatgcagcggcatgtcttggttgatgggaaggtcaggactgacaag 240 Query: 312 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 371 ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| Sbjct: 241 acctaccctgctggtttcatggatgtgatttccattccaaagactggtgagaactacagg 300 Query: 372 cttctgtatgacaccaagggccgcttccgccttca 406 ||||| |||||||||||||| |||||||||||||| Sbjct: 301 cttctctatgacaccaagggtcgcttccgccttca 335
>gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA, complete cds Length = 1090 Score = 242 bits (122), Expect = 7e-61 Identities = 287/342 (83%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 ||||||||||||||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 79 gcaaccatggctaggggattgaagaagcacttgaagaggctcaatgcgcccaagcattgg 138 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| || Sbjct: 139 atgctcgacaagcttggcggagcttttgctcccaagccatcttctggacctcacaagtcc 198 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 ||||| ||||| ||||||||||||||| | |||||||| || || || ||||| | || Sbjct: 199 agggagtgccttcctctgatcctcatcatcaggaacaggctcaagtatgctctgaactac 258 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 ||||| || |||||||| ||||| || ||| | | | |||||| |||||| | ||| Sbjct: 259 cgtgaggtcatttctatcctgatgcaacgccatgtacttgttgatggcaaggtcaggact 318 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 |||||||||||||||||||| |||||||| | ||||| || |||||||| |||||| Sbjct: 319 gacaagacctaccctgctgggttcatggatgtcatttccatccccaagacaatggagaac 378 Query: 366 tacaggcttctgtatgacaccaagggccgcttccgccttcac 407 |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 379 tacaggctgctttatgacaccaagggccgcttccgtcttcac 420
>gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps4) mRNA, complete cds Length = 1013 Score = 240 bits (121), Expect = 3e-60 Identities = 292/349 (83%) Strand = Plus / Plus Query: 59 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 118 |||||| || ||||||||||| || |||||||||||| ||||||||||||||||||| Sbjct: 61 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcccccaa 120 Query: 119 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 178 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 121 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 180 Query: 179 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctct 238 |||| | ||||| |||||||| |||||||||||| | |||||||| || || || ||||| Sbjct: 181 caagtctagggagtgcctgccactgatcctcatcatcaggaacaggctcaagtatgctct 240 Query: 239 cacggaccgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggt 298 || ||||||| || || ||||| ||||| || ||| | | | |||||| ||||| Sbjct: 241 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 300 Query: 299 ccgcactgacaagacctaccctgctggtttcatggacattatttctattcccaagactgg 358 | | || |||||||||||||||||||| |||||||| | ||||| || |||||||| Sbjct: 301 caggacagacaagacctaccctgctgggttcatggatgtcatttccatccccaagaccaa 360 Query: 359 tgagaactacaggcttctgtatgacaccaagggccgcttccgccttcac 407 ||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 361 tgagaactacaggctgctgtacgataccaagggccgcttccgccttcac 409
>gb|BT016261.1| Zea mays clone Contig94 mRNA sequence Length = 1116 Score = 234 bits (118), Expect = 2e-58 Identities = 286/342 (83%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 ||||||||||||||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 100 gcaaccatggctaggggattgaagaagcacttgaagaggctcaatgcgcccaagcattgg 159 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| || Sbjct: 160 atgctcgacaagcttggcggagcttttgctcccaagccatcttctggacctcacaagtcc 219 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 ||||| ||||| ||||||||||||||| | |||||||| || || || ||||| | || Sbjct: 220 agggagtgccttcctctgatcctcatcatcaggaacaggctcaagtatgctctgaactac 279 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 ||||| || |||||||| ||||| || ||| | | | |||||| |||||| | ||| Sbjct: 280 cgtgaggtcatttctatcctgatgcaacgccatgtacttgttgatggcaaggtcaggact 339 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 |||||||||||||||||||| |||||||| | ||||| || || ||||| |||||| Sbjct: 340 gacaagacctaccctgctgggttcatggatgtcatttccatccctaagacaatggagaac 399 Query: 366 tacaggcttctgtatgacaccaagggccgcttccgccttcac 407 |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 400 tacaggctgctttatgacaccaagggccgcttccgtcttcac 441
>gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds Length = 1037 Score = 232 bits (117), Expect = 7e-58 Identities = 291/349 (83%) Strand = Plus / Plus Query: 59 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 118 |||||| || ||||||||||| || |||||||||||| |||||||||||||||| || Sbjct: 59 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcgcccaa 118 Query: 119 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 178 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 119 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 178 Query: 179 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctct 238 |||| | ||||| |||||||| |||||||||||| | |||||||| || || || ||||| Sbjct: 179 caagtctagggagtgcctgccactgatcctcatcatcaggaacaggctcaagtatgctct 238 Query: 239 cacggaccgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggt 298 || ||||||| || || ||||| ||||| || ||| | | | |||||| ||||| Sbjct: 239 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 298 Query: 299 ccgcactgacaagacctaccctgctggtttcatggacattatttctattcccaagactgg 358 | | || |||||||||||||||||||| |||||||| | ||||| || |||||||| Sbjct: 299 caggacagacaagacctaccctgctgggttcatggatgtcatttccatccccaagaccaa 358 Query: 359 tgagaactacaggcttctgtatgacaccaagggccgcttccgccttcac 407 ||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 359 tgagaactacaggctgctgtacgataccaagggccgcttccgccttcac 407
>dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123J20, full insert sequence Length = 1162 Score = 216 bits (109), Expect = 4e-53 Identities = 274/329 (83%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 99 atggcgaggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgttt 158 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 191 ||||||||||||||||| ||||| |||||||| || |||||||| ||||| || |||| Sbjct: 159 gacaagcttggtggagcatttgcacccaagccttcttctggtccccacaaagctcgggag 218 Query: 192 tgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaa 251 ||| ||||| ||||||| ||||| |||||||| |||| || ||||| || ||||||| Sbjct: 219 tgcttgcctttgatccttatcctcaggaacaggttgaagtatgctctgacctaccgtgag 278 Query: 252 gtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaag 311 || || ||| | |||||||| ||| |||||| ||||||||||||| | ||||||||| Sbjct: 279 gttatttccatcttgatgcagcggcatgttatggttgatggaaaggtcaggactgacaag 338 Query: 312 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 371 || || || ||||| ||||||||| || | || ||| | |||||||| ||||| | | | Sbjct: 339 acttatccggctggattcatggacgttgtgtcaattgcaaagactggggagaatttccgc 398 Query: 372 cttctgtatgacaccaagggccgcttccg 400 |||||||||||||||||||| |||||||| Sbjct: 399 cttctgtatgacaccaagggtcgcttccg 427
>emb|X79300.1|GHRS4E G.hirsutum (DPL 62) mRNA for ribosomal protein small subunit 4e Length = 1090 Score = 182 bits (92), Expect = 6e-43 Identities = 223/264 (84%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 |||||||| || |||||||| ||| ||||||||||||||||||| |||||||||||| Sbjct: 56 atggctagagggttgaagaaacatttgaagaggctcaatgcccctaggcattggatgctt 115 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 191 |||||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 116 gacaagcttggtggtgcttttgcacccaagccatcatctggtcctcacaagtctagggaa 175 Query: 192 tgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaa 251 ||| |||| |||||||||| ||| | |||||| ||||||| ||||| || | | ||| Sbjct: 176 tgcttgccattgatcctcattctgcgaaacagattgaaatatgctctgacctatagagaa 235 Query: 252 gtgcaat-ctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaa 310 || || | |||| || |||||| | ||| |||||| ||||| ||||| | ||||| || Sbjct: 236 gt-cattgctattctcatgcagaggcatgttatggtagatgggaaggttagaactgataa 294 Query: 311 gacctaccctgctggtttcatgga 334 |||||||||||||||||||||||| Sbjct: 295 gacctaccctgctggtttcatgga 318
>gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4 (RPS4) mRNA, complete cds Length = 1086 Score = 176 bits (89), Expect = 4e-41 Identities = 188/221 (85%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 47 atggctagaggattgaagaagcatctgaagaggctcaatgccccaaagcattggatgctc 106 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 191 ||||||||||| || |||||||| ||||||||||||||||| |||||||| | ||||| Sbjct: 107 gacaagcttgggggtgcttttgctcccaagccatcatctgggcctcacaaatctagggag 166 Query: 192 tgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaa 251 ||||| || ||||||||||||||||||||||| |||| || |||||||| ||||||| Sbjct: 167 tgccttccactgatcctcatcctgaggaacaggttgaagtatgctctcacataccgtgag 226 Query: 252 gtgcaatctatccttatgcagcgtcatattatggctgatgg 292 || || || || ||||||||||||||| ||| |||||| Sbjct: 227 gtcgtttccattctcatgcagcgtcatattttggttgatgg 267
>gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence Length = 1145 Score = 172 bits (87), Expect = 6e-40 Identities = 228/275 (82%) Strand = Plus / Minus Query: 59 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 118 |||||| || ||||||||||| || |||||||||||| |||||||||||||||| || Sbjct: 1063 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcgcccaa 1004 Query: 119 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 178 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 1003 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 944 Query: 179 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctct 238 |||| | ||||| |||||||| ||||||||||| | |||||||| || || || ||||| Sbjct: 943 caagtctagggagtgcctgccactgatcctcattatcaggaacaggctcaagtatgctct 884 Query: 239 cacggaccgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggt 298 || ||||||| || || ||||| ||||| || ||| | | | |||||| ||||| Sbjct: 883 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 824 Query: 299 ccgcactgacaagacctaccctgctggtttcatgg 333 | | || |||||||||||||||||||||||||||| Sbjct: 823 caggacagacaagacctaccctgctggtttcatgg 789 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 360 gagaactacaggcttctgtatgacaccaagggccgcttccgccttcac 407 |||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 680 gagaactacaggctgctgtacgataccaagggccgcttccgccttcac 633
>ref|XM_475130.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 738 Score = 157 bits (79), Expect = 3e-35 Identities = 226/275 (82%) Strand = Plus / Plus Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||||||||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 1 atgcttgacaagcttggtggagcatttgcacccaagccttcttctggtccccacaaagct 60 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 |||| ||| ||||| ||||||| ||||| |||||||| |||| || ||||| || || Sbjct: 61 cgggagtgcttgcctttgatccttatcctcaggaacaggttgaagtatgctctgacctac 120 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 ||||| || || ||| | |||||||| ||| |||||| ||||||||||||| | ||| Sbjct: 121 cgtgaggttatttccatcttgatgcagcggcatgttatggttgatggaaaggtcaggact 180 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 |||||||| || || ||||| ||||||||| || | || ||| | |||||||| ||||| Sbjct: 181 gacaagacttatccggctggattcatggacgttgtgtcaattgcaaagactggggagaat 240 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | |||||||||||||||||||| |||||||| Sbjct: 241 ttccgccttctgtatgacaccaagggtcgcttccg 275
>dbj|D25237.1|RICSS620B Oryza sativa SS620 mRNA for scar protein, partial cds Length = 293 Score = 153 bits (77), Expect = 5e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 258 tctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctac 317 |||||||| |||||||| ||| | ||| |||||| |||||| | ||||||||||||||| Sbjct: 32 tctatcctcatgcagcgccatgtcttggttgatggcaaggtcaggactgacaagacctac 91 Query: 318 cctgctggtttcatggacattatttctattcccaagactggtgagaactacaggcttctg 377 || |||||||||||||| | ||||| || |||||||||||||||||||||||||||||| Sbjct: 92 ccagctggtttcatggatgtcatttccatccccaagactggtgagaactacaggcttctg 151 Query: 378 tatgacaccaagggccgcttccgccttca 406 || ||||||||||| || ||||||||||| Sbjct: 152 tacgacaccaagggacgtttccgccttca 180
>dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, complete cds Length = 1105 Score = 149 bits (75), Expect = 8e-33 Identities = 237/291 (81%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 82 gcaaccatggctagaggtttgaagaagcatttgaagaggctcaatgcccctaagcattgg 141 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||| || || |||||||| || ||||| |||||||| |||||||| || || || || Sbjct: 142 atgctcgataaacttggtggtgcatttgctcccaagccttcatctggaccccataaatcc 201 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 ||||||||||||||| |||| || || || | ||||| ||||| || ||||| || || Sbjct: 202 agggaatgcctgcctttgattcttattttgcgaaacaggctgaagtatgctctaacttac 261 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 |||||||| ||||| ||| | ||||| || ||| || | | |||||| ||||| | || Sbjct: 262 cgtgaagtccaatccatcttgatgcaacgacatgttcttgttgatgggaaggttaggacg 321 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagact 356 || |||||||| || |||||||||||||| || | || |||||||||||| Sbjct: 322 gataagacctatccagctggtttcatggatgttgtatcaattcccaagact 372
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 137 bits (69), Expect = 3e-29 Identities = 153/181 (84%) Strand = Plus / Minus Query: 153 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 212 |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 318017 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 317958 Query: 213 ctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcag 272 | |||||||| || || || ||||| || ||||||| || |||||||| |||||| Sbjct: 317957 atcaggaacaggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcag 317898 Query: 273 cgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 332 || ||| | ||| |||||| |||||| | ||||||||||||||||| |||||||||||| Sbjct: 317897 cgccatgtcttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatg 317838 Query: 333 g 333 | Sbjct: 317837 g 317837 Score = 103 bits (52), Expect = 4e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 78 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 137 ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 318196 aggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaag 318137 Query: 138 cttggtggagcttttg 153 |||||||||||||||| Sbjct: 318136 cttggtggagcttttg 318121 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 339 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 398 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 317739 atttccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttc 317680 Query: 399 cgccttca 406 |||||||| Sbjct: 317679 cgccttca 317672 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 42 agcacggcgacctagcccgagctcgcaaccatgg 75 |||||||||||||||||||| ||||||||||||| Sbjct: 319055 agcacggcgacctagcccgacctcgcaaccatgg 319022
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 3e-29 Identities = 153/181 (84%) Strand = Plus / Plus Query: 153 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 212 |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 14497061 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcctcatc 14497120 Query: 213 ctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcag 272 | |||||||| |||| || || || || ||||||| || |||||||| |||||| Sbjct: 14497121 atcaggaacaggttgaagtatgcgctgacataccgtgaggttatctctatcctgatgcag 14497180 Query: 273 cgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 332 || ||| | ||| |||||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 14497181 cggcatgtcttggttgatgggaaggtcaggactgacaagacctaccctgctggtttcatg 14497240 Query: 333 g 333 | Sbjct: 14497241 g 14497241 Score = 103 bits (52), Expect = 4e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 339 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 398 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 14497353 atttccattccaaagactggtgagaactacaggcttctctatgacaccaagggtcgcttc 14497412 Query: 399 cgccttca 406 |||||||| Sbjct: 14497413 cgccttca 14497420 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 78 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 137 ||||| |||||||||||||| |||||||||||||| || || |||||||| |||||| Sbjct: 14496878 aggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaag 14496937 Query: 138 cttggtggagcttttg 153 || || |||||||||| Sbjct: 14496938 ctcggcggagcttttg 14496953 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 46 cggcgacctagcccgagctcgcaaccatgg 75 ||||||| |||| ||||||||||||||||| Sbjct: 14496272 cggcgacgtagctcgagctcgcaaccatgg 14496301
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 137 bits (69), Expect = 3e-29 Identities = 153/181 (84%) Strand = Plus / Minus Query: 153 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 212 |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 46801 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 46742 Query: 213 ctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcag 272 | |||||||| || || || ||||| || ||||||| || |||||||| |||||| Sbjct: 46741 atcaggaacaggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcag 46682 Query: 273 cgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 332 || ||| | ||| |||||| |||||| | ||||||||||||||||| |||||||||||| Sbjct: 46681 cgccatgtcttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatg 46622 Query: 333 g 333 | Sbjct: 46621 g 46621 Score = 103 bits (52), Expect = 4e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 78 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 137 ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 46980 aggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaag 46921 Query: 138 cttggtggagcttttg 153 |||||||||||||||| Sbjct: 46920 cttggtggagcttttg 46905 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 339 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 398 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 46523 atttccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttc 46464 Query: 399 cgccttca 406 |||||||| Sbjct: 46463 cgccttca 46456 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 42 agcacggcgacctagcccgagctcgcaaccatgg 75 |||||||||||||||||||| ||||||||||||| Sbjct: 47839 agcacggcgacctagcccgacctcgcaaccatgg 47806
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 137 bits (69), Expect = 3e-29 Identities = 153/181 (84%) Strand = Plus / Plus Query: 153 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 212 |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 56374 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcctcatc 56433 Query: 213 ctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcag 272 | |||||||| |||| || || || || ||||||| || |||||||| |||||| Sbjct: 56434 atcaggaacaggttgaagtatgcgctgacataccgtgaggttatctctatcctgatgcag 56493 Query: 273 cgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 332 || ||| | ||| |||||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 56494 cggcatgtcttggttgatgggaaggtcaggactgacaagacctaccctgctggtttcatg 56553 Query: 333 g 333 | Sbjct: 56554 g 56554 Score = 103 bits (52), Expect = 4e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 339 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 398 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 56666 atttccattccaaagactggtgagaactacaggcttctctatgacaccaagggtcgcttc 56725 Query: 399 cgccttca 406 |||||||| Sbjct: 56726 cgccttca 56733 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 78 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 137 ||||| |||||||||||||| |||||||||||||| || || |||||||| |||||| Sbjct: 56191 aggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaag 56250 Query: 138 cttggtggagcttttg 153 || || |||||||||| Sbjct: 56251 ctcggcggagcttttg 56266 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 46 cggcgacctagcccgagctcgcaaccatgg 75 ||||||| |||| ||||||||||||||||| Sbjct: 55585 cggcgacgtagctcgagctcgcaaccatgg 55614
>dbj|D21302.1|RICSS536 Oryza sativa SS536 mRNA for ribosomal protein S4, partial sequence Length = 347 Score = 135 bits (68), Expect = 1e-28 Identities = 121/140 (86%) Strand = Plus / Plus Query: 267 atgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctggt 326 |||||||| ||| | ||| |||||| |||||| | ||||||||||||||||| |||||| Sbjct: 4 atgcagcgccatgtnttggttgatggcaaggtcaggactgacaagacctacccagctggt 63 Query: 327 ttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgacacc 386 |||||||| | ||||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 64 ttcatggatgtnatttccatccccaagactggtgagaactacaggcttctntacgacacc 123 Query: 387 aagggccgcttccgccttca 406 ||||| || |||| |||||| Sbjct: 124 aagggacgtttccnccttca 143
>emb|X76651.1|STRPS4 S.tuberosum (Desiree) mRNA for ribosomal protein S4 Length = 966 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 50 atggctagaggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgctt 109 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaa 181 || || ||||||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 110 gataaacttggtggagcatttgcccccaagccatcctctgggccacacaa 159 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 309 aagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactac 368 ||||| || ||||||||||||||||| | |||| ||||| |||||| |||||||| | Sbjct: 287 aagacatatcctgctggtttcatggatgtcgtttcaattccgaagactaatgagaacttc 346 Query: 369 aggcttctgtatgacaccaagggccgcttccgccttcac 407 | || || |||||||| |||||||| ||||| |||||| Sbjct: 347 cgtctcctttatgacactaagggccgattccgtcttcac 385
>gb|DQ268839.1| Solanum tuberosum clone 130D11 40S ribosomal protein S4-like protein mRNA, complete cds Length = 1052 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33 atggctagaggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgctt 92 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 191 || || ||||||||||| ||||| ||||||||||| ||||| || |||||| | ||||| Sbjct: 93 gataaacttggtggagcatttgctcccaagccatcctctgggccacacaagtcaagggag 152 Query: 192 tgcctgcc 199 ||| |||| Sbjct: 153 tgcttgcc 160 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 309 aagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactac 368 ||||| || ||||||||||||||||| | |||| ||||| |||||| |||||||| | Sbjct: 270 aagacatatcctgctggtttcatggatgtcgtttcaattccgaagactaatgagaacttc 329 Query: 369 aggcttctgtatgacaccaagggccgcttccgccttcac 407 | || || |||||||| |||||||| ||||| |||||| Sbjct: 330 cgtctcctttatgacactaagggccgattccgtcttcac 368
>ref|NM_125228.3| Arabidopsis thaliana structural constituent of ribosome AT5G58420 mRNA, complete cds Length = 1080 Score = 123 bits (62), Expect = 5e-25 Identities = 263/330 (79%) Strand = Plus / Plus Query: 71 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 130 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 93 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 152 Query: 131 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 190 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 153 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 212 Query: 191 atgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtga 250 ||||| || || |||| ||| | |||||||| |||| || ||||| || ||||||| Sbjct: 213 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 272 Query: 251 agtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaa 310 |||| || ||| | ||||| | ||||| | |||||| || ||| | || ||||| Sbjct: 273 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 332 Query: 311 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 370 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 333 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 392 Query: 371 gcttctgtatgacaccaagggccgcttccg 400 ||||| ||||| |||||||| || ||||| Sbjct: 393 tcttctctatgataccaagggacgtttccg 422
>gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds Length = 1005 Score = 123 bits (62), Expect = 5e-25 Identities = 263/330 (79%) Strand = Plus / Plus Query: 71 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 130 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 84 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 143 Query: 131 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 190 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 144 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 203 Query: 191 atgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtga 250 ||||| || || |||| ||| | |||||||| |||| || ||||| || ||||||| Sbjct: 204 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 263 Query: 251 agtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaa 310 |||| || ||| | ||||| | ||||| | |||||| || ||| | || ||||| Sbjct: 264 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 323 Query: 311 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 370 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 324 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 383 Query: 371 gcttctgtatgacaccaagggccgcttccg 400 ||||| ||||| |||||||| || ||||| Sbjct: 384 tcttctctatgataccaagggacgtttccg 413
>emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 978 Score = 123 bits (62), Expect = 5e-25 Identities = 263/330 (79%) Strand = Plus / Plus Query: 71 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 130 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 93 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 152 Query: 131 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 190 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 153 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 212 Query: 191 atgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtga 250 ||||| || || |||| ||| | |||||||| |||| || ||||| || ||||||| Sbjct: 213 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 272 Query: 251 agtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaa 310 |||| || ||| | ||||| | ||||| | |||||| || ||| | || ||||| Sbjct: 273 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 332 Query: 311 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 370 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 333 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 392 Query: 371 gcttctgtatgacaccaagggccgcttccg 400 ||||| ||||| |||||||| || ||||| Sbjct: 393 tcttctctatgataccaagggacgtttccg 422
>gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete sequence Length = 1010 Score = 123 bits (62), Expect = 5e-25 Identities = 263/330 (79%) Strand = Plus / Plus Query: 71 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 130 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 88 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 147 Query: 131 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 190 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 148 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 207 Query: 191 atgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtga 250 ||||| || || |||| ||| | |||||||| |||| || ||||| || ||||||| Sbjct: 208 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 267 Query: 251 agtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaa 310 |||| || ||| | ||||| | ||||| | |||||| || ||| | || ||||| Sbjct: 268 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 327 Query: 311 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 370 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 328 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 387 Query: 371 gcttctgtatgacaccaagggccgcttccg 400 ||||| ||||| |||||||| || ||||| Sbjct: 388 tcttctctatgataccaagggacgtttccg 417
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 78 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 137 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 79426 aggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaag 79485 Query: 138 cttggtggagcttttg 153 ||||||||||| |||| Sbjct: 79486 cttggtggagcatttg 79501 Score = 75.8 bits (38), Expect = 1e-10 Identities = 143/178 (80%) Strand = Plus / Plus Query: 156 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 215 |||||||| || |||||||| ||||| || |||| ||| ||||| ||||||| ||||| Sbjct: 79760 cccaagccttcttctggtccccacaaagctcgggagtgcttgcctttgatccttatcctc 79819 Query: 216 aggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcagcgt 275 |||||||| |||| || ||||| || ||||||| || || ||| | |||||||| Sbjct: 79820 aggaacaggttgaagtatgctctgacctaccgtgaggttatttccatcttgatgcagcgg 79879 Query: 276 catattatggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 333 ||| |||||| ||||||||||||| | ||||||||||| || || ||||| ||||||| Sbjct: 79880 catgttatggttgatggaaaggtcaggactgacaagacttatccggctggattcatgg 79937 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 351 aagactggtgagaactacaggcttctgtatgacaccaagggccgcttccg 400 |||||||| ||||| | | | |||||||||||||||||||| |||||||| Sbjct: 80045 aagactggggagaatttccgccttctgtatgacaccaagggtcgcttccg 80094
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 78 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 137 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 17549621 aggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaag 17549680 Query: 138 cttggtggagcttttg 153 ||||||||||| |||| Sbjct: 17549681 cttggtggagcatttg 17549696 Score = 75.8 bits (38), Expect = 1e-10 Identities = 143/178 (80%) Strand = Plus / Plus Query: 156 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 215 |||||||| || |||||||| ||||| || |||| ||| ||||| ||||||| ||||| Sbjct: 17549955 cccaagccttcttctggtccccacaaagctcgggagtgcttgcctttgatccttatcctc 17550014 Query: 216 aggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatccttatgcagcgt 275 |||||||| |||| || ||||| || ||||||| || || ||| | |||||||| Sbjct: 17550015 aggaacaggttgaagtatgctctgacctaccgtgaggttatttccatcttgatgcagcgg 17550074 Query: 276 catattatggctgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 333 ||| |||||| ||||||||||||| | ||||||||||| || || ||||| ||||||| Sbjct: 17550075 catgttatggttgatggaaaggtcaggactgacaagacttatccggctggattcatgg 17550132 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 351 aagactggtgagaactacaggcttctgtatgacaccaagggccgcttccg 400 |||||||| ||||| | | | |||||||||||||||||||| |||||||| Sbjct: 17550240 aagactggggagaatttccgccttctgtatgacaccaagggtcgcttccg 17550289
>gb|AF528526.1| Glycine max 40S ribosomal S4 protein mRNA, complete cds Length = 1054 Score = 109 bits (55), Expect = 7e-21 Identities = 211/263 (80%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 98 atggctaggggattgaagaagcatctcaagaggctcaatgctcctaagcattggatgctt 157 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 191 ||||| || ||||| || ||||| ||||| || |||||||| || ||||| | ||||| Sbjct: 158 gacaaactgggtggtgcatttgcgcccaaaccctcatctggaccacacaaatctagggag 217 Query: 192 tgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaa 251 ||||| || || || |||||||| | ||| | || || || ||||| || |||||||| Sbjct: 218 tgccttcccctcatactcatcctacgaaaccggctaaagtatgctctgacttaccgtgaa 277 Query: 252 gtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaag 311 || |||| || |||||| | ||| || | | ||||||||| ||| | ||||||||| Sbjct: 278 gtcatcgctattctgatgcagagacatgttcttgttgatggaaaagtcaggactgacaag 337 Query: 312 acctaccctgctggtttcatgga 334 || |||||||||||||||||||| Sbjct: 338 acttaccctgctggtttcatgga 360
>gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete sequence Length = 1011 Score = 109 bits (55), Expect = 7e-21 Identities = 265/335 (79%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || || |||||||||||||| ||||||||||||||||| |||||| Sbjct: 22 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgcccctaagcattgg 81 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 82 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 141 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 ||||| || || ||||| |||| ||| | |||||||| |||| || ||| | || || Sbjct: 142 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 201 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 |||||||| |||||| | ||||| | ||||| | |||||| || ||| | ||| Sbjct: 202 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 261 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 262 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 321 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| || ||||||||||| || ||||| Sbjct: 322 ttccgtcttctctacgacaccaagggacgtttccg 356
>ref|NM_120791.2| Arabidopsis thaliana structural constituent of ribosome AT5G07090 transcript variant AT5G07090.1 mRNA, complete cds Length = 1088 Score = 101 bits (51), Expect = 2e-18 Identities = 264/335 (78%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 22 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 81 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 82 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 141 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 ||||| || || ||||| |||| ||| | |||||||| |||| || ||| | || || Sbjct: 142 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 201 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 |||||||| |||||| | ||||| | ||||| | |||||| || ||| | ||| Sbjct: 202 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 261 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 262 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 321 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| || ||||||||||| || ||||| Sbjct: 322 ttccgtcttctctacgacaccaagggacgtttccg 356
>gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090) mRNA, complete cds Length = 1059 Score = 101 bits (51), Expect = 2e-18 Identities = 264/335 (78%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 19 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 78 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 79 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 138 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 ||||| || || ||||| |||| ||| | |||||||| |||| || ||| | || || Sbjct: 139 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 198 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 |||||||| |||||| | ||||| | ||||| | |||||| || ||| | ||| Sbjct: 199 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 258 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 259 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 318 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| || ||||||||||| || ||||| Sbjct: 319 ttccgtcttctctacgacaccaagggacgtttccg 353
>gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds Length = 1008 Score = 101 bits (51), Expect = 2e-18 Identities = 264/335 (78%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 19 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 78 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 185 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 79 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 138 Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgctctcacggac 245 ||||| || || ||||| |||| ||| | |||||||| |||| || ||| | || || Sbjct: 139 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 198 Query: 246 cgtgaagtgcaatctatccttatgcagcgtcatattatggctgatggaaaggtccgcact 305 |||||||| |||||| | ||||| | ||||| | |||||| || ||| | ||| Sbjct: 199 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 258 Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 259 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 318 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| || ||||||||||| || ||||| Sbjct: 319 ttccgtcttctctacgacaccaagggacgtttccg 353
>gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds Length = 995 Score = 99.6 bits (50), Expect = 7e-18 Identities = 89/102 (87%) Strand = Plus / Plus Query: 71 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 130 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 73 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 132 Query: 131 tgacaagcttggtggagcttttgcccccaagccatcatctgg 172 |||||| |||||||| || |||||||| ||||| || ||||| Sbjct: 133 tgacaaacttggtggtgcatttgccccaaagccgtcttctgg 174 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 ||||||||||||||||||||||||||||| || | ||||| |||||||| ||||||| Sbjct: 308 gacaagacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaac 367 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| ||||| |||||||| || ||||| Sbjct: 368 ttccgtcttctctatgataccaagggacgtttccg 402
>emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 988 Score = 99.6 bits (50), Expect = 7e-18 Identities = 89/102 (87%) Strand = Plus / Plus Query: 71 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 130 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 64 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 123 Query: 131 tgacaagcttggtggagcttttgcccccaagccatcatctgg 172 |||||| |||||||| || |||||||| ||||| || ||||| Sbjct: 124 tgacaaacttggtggtgcatttgccccaaagccgtcttctgg 165 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 ||||||||||||||||||||||||||||| || | ||||| |||||||| ||||||| Sbjct: 299 gacaagacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaac 358 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| ||||| |||||||| || ||||| Sbjct: 359 ttccgtcttctctatgataccaagggacgtttccg 393
>emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 997 Score = 99.6 bits (50), Expect = 7e-18 Identities = 89/102 (87%) Strand = Plus / Plus Query: 71 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 130 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 73 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 132 Query: 131 tgacaagcttggtggagcttttgcccccaagccatcatctgg 172 |||||| |||||||| || |||||||| ||||| || ||||| Sbjct: 133 tgacaaacttggtggtgcatttgccccaaagccgtcttctgg 174 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 ||||||||||||||||||||||||||||| || | ||||| |||||||| ||||||| Sbjct: 308 gacaagacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaac 367 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| ||||| |||||||| || ||||| Sbjct: 368 ttccgtcttctctatgataccaagggacgtttccg 402
>ref|NM_127291.2| Arabidopsis thaliana structural constituent of ribosome AT2G17360 mRNA, complete cds Length = 1074 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 108 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 167 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 168 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 224 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 345 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgag 404 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 405 aacttccgtcttttgtatgacaccaagggacgtttccg 442
>ref|NM_001036769.1| Arabidopsis thaliana structural constituent of ribosome AT5G07090 transcript variant AT5G07090.2 mRNA, complete cds Length = 1174 Score = 97.6 bits (49), Expect = 3e-17 Identities = 250/317 (78%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 125 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 184 Query: 144 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 203 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 185 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 244 Query: 204 atcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatc 263 |||| ||| | |||||||| |||| || ||| | || |||||||||| |||||| Sbjct: 245 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 304 Query: 264 cttatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgct 323 | ||||| | ||||| | |||||| || ||| | ||||||||||| ||||||||| Sbjct: 305 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 364 Query: 324 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 383 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 365 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 424 Query: 384 accaagggccgcttccg 400 |||||||| || ||||| Sbjct: 425 accaagggacgtttccg 441
>gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, complete cds Length = 789 Score = 97.6 bits (49), Expect = 3e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 ||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||| Sbjct: 1 atggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgctt 60 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctgg 172 ||||| |||||||| || |||||||| ||||| || ||||| Sbjct: 61 gacaaacttggtggtgcatttgccccaaagccgtcttctgg 101 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 ||||||||||||||||||||||||||||| || | ||||| |||||||| ||||||| Sbjct: 235 gacaagacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaac 294 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| ||||| |||||||| || ||||| Sbjct: 295 ttccgtcttctctatgataccaagggacgtttccg 329
>gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090) mRNA, complete cds Length = 820 Score = 97.6 bits (49), Expect = 3e-17 Identities = 250/317 (78%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 13 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 72 Query: 144 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 203 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 73 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 132 Query: 204 atcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatc 263 |||| ||| | |||||||| |||| || ||| | || |||||||||| |||||| Sbjct: 133 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 192 Query: 264 cttatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgct 323 | ||||| | ||||| | |||||| || ||| | ||||||||||| ||||||||| Sbjct: 193 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 252 Query: 324 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 383 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 253 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 312 Query: 384 accaagggccgcttccg 400 |||||||| || ||||| Sbjct: 313 accaagggacgtttccg 329
>gb|AY035131.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360) mRNA, complete cds Length = 1032 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 67 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 126 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 127 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 183 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 304 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgag 363 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 364 aacttccgtcttttgtatgacaccaagggacgtttccg 401
>gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds Length = 789 Score = 97.6 bits (49), Expect = 3e-17 Identities = 250/317 (78%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 13 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 72 Query: 144 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 203 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 73 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 132 Query: 204 atcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatc 263 |||| ||| | |||||||| |||| || ||| | || |||||||||| |||||| Sbjct: 133 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 192 Query: 264 cttatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgct 323 | ||||| | ||||| | |||||| || ||| | ||||||||||| ||||||||| Sbjct: 193 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 252 Query: 324 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 383 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 253 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 312 Query: 384 accaagggccgcttccg 400 |||||||| || ||||| Sbjct: 313 accaagggacgtttccg 329
>gb|AF370469.1|AF370469 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1034 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 68 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 127 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 128 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 184 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 305 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgag 364 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 365 aacttccgtcttttgtatgacaccaagggacgtttccg 402
>emb|BX820506.1|CNS0A8QA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH41ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1000 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 53 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 112 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 113 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 169 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| | |||| Sbjct: 290 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaaaaaatgag 349 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 350 aacttccgtcttttgtatgacaccaagggacgtttccg 387
>emb|BX818868.1|CNS0A8UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1007 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 60 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 119 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 120 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 176 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 297 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgag 356 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 357 aacttccgtcttttgtatgacaccaagggacgtttccg 394
>emb|BX818793.1|CNS0A8YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 966 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 57 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 116 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 117 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 173 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaa 352 ||||||||||| |||||||||||||||||||| || ||||||| ||||| Sbjct: 295 actgacaagacttaccctgctggtttcatggatgttgtttctatgcccaa 344
>gb|AY084230.1| Arabidopsis thaliana clone 10042 mRNA, complete sequence Length = 1023 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 66 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 125 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 108 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 167 Query: 126 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 168 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 224 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 345 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgag 404 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 405 aacttccgtcttttgtatgacaccaagggacgtttccg 442
>gb|AY062983.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360) mRNA, complete cds Length = 817 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 ||||| || ||||||||||||||| |||||||||||||||| || |||||||||||| Sbjct: 1 atggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgctt 60 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 || || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 61 gataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 111 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 232 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgag 291 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 292 aacttccgtcttttgtatgacaccaagggacgtttccg 329
>gb|AY064625.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 813 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 72 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 131 ||||| || ||||||||||||||| |||||||||||||||| || |||||||||||| Sbjct: 1 atggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgctt 60 Query: 132 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 182 || || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 61 gataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 111 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 232 actgacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgag 291 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||| |||||||||||||||| || ||||| Sbjct: 292 aacttccgtcttttgtatgacaccaagggacgtttccg 329
>emb|BX832253.1|CNS09ZUO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 945 Score = 93.7 bits (47), Expect = 4e-16 Identities = 200/251 (79%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 70 Query: 144 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 203 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 71 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 130 Query: 204 atcctcatcctgaggaacagactgaaatacgctctcacggaccgtgaagtgcaatctatc 263 |||| ||| | |||||||| |||| || ||| | || |||||||||| |||||| Sbjct: 131 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatttctatc 190 Query: 264 cttatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgct 323 | ||||| | ||||| | |||||| || ||| | ||||||||||| ||||||||| Sbjct: 191 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 250 Query: 324 ggtttcatgga 334 ||||||||||| Sbjct: 251 ggtttcatgga 261
>emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 976 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 7 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 66 Query: 144 ggagcttttgcccccaagccatcatctggtcctcacaag 182 || || || || ||||| ||||| ||||| ||||||||| Sbjct: 67 ggtgccttcgctcccaaaccatcttctggacctcacaag 105 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | || || |||||||| |||| Sbjct: 226 actgacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgag 285 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||||| || ||||||||||| || ||||| Sbjct: 286 aacttccgtcttctctacgacaccaagggacgtttccg 323
>emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 942 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 70 Query: 144 ggagcttttgcccccaagccatcatctggtcctcacaag 182 || || || || ||||| ||||| ||||| ||||||||| Sbjct: 71 ggtgccttcgctcccaaaccatcttctggacctcacaag 109 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | || || |||||||| |||| Sbjct: 230 actgacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgag 289 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||||| || ||||||||||| || ||||| Sbjct: 290 aacttccgtcttctctacgacaccaagggacgtttccg 327
>emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 2 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 61 Query: 144 ggagcttttgcccccaagccatcatctggtcctcacaag 182 || || || || ||||| ||||| ||||| ||||||||| Sbjct: 62 ggtgccttcgctcccaaaccatcttctggacctcacaag 100 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 362 ||||||||||| |||||||||||||||||||| || | || || |||||||| |||| Sbjct: 221 actgacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgag 280 Query: 363 aactacaggcttctgtatgacaccaagggccgcttccg 400 |||| | | ||||| || ||||||||||| || ||||| Sbjct: 281 aacttccgtcttctctacgacaccaagggacgtttccg 318
>emb|BX831856.1|CNS09ZNQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 934 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 87 aagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgga 146 |||||||||||||||||||||||||| || | ||||||||||||||| |||||||| Sbjct: 14 aagaagcatctgaagaggctcaatgctcctgagcgttggatgcttgacaaacttggtggt 73 Query: 147 gcttttgcccccaagccatcatctggtcctcacaag 182 || || || ||||| ||||| ||||| ||||||||| Sbjct: 74 gccttcgctcccaaaccatcttctggacctcacaag 109 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatgga 334 ||||| ||||| |||||||||||||||||||| Sbjct: 230 actgagaagacttaccctgctggtttcatgga 261
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2 Length = 51440 Score = 79.8 bits (40), Expect = 6e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 78 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 137 ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 5950 aggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaa 6009 Query: 138 cttggtgg 145 |||||||| Sbjct: 6010 cttggtgg 6017 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 ||||||||||||||||||||||||||||| || | ||||| |||||||| ||||||| Sbjct: 6281 gacaagacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaac 6340 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| ||||| |||||||| || ||||| Sbjct: 6341 ttccgtcttctctatgataccaagggacgtttccg 6375
>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence Length = 128856 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 81 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 140 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | Sbjct: 82054 ggtttgaagaagcatttgaagaggctcaatgcccccaagcattggatgcttgacaaattg 82113 Query: 141 ggtggagcttttg 153 ||||| ||||||| Sbjct: 82114 ggtggtgcttttg 82126 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 375 ctgtatgacaccaagggccgcttccg 400 |||||||||||||||||||| ||||| Sbjct: 82893 ctgtatgacaccaagggccgtttccg 82918
>emb|BX830139.1|CNS09ZZ0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 737 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 306 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 365 ||||||||||||||||||||||||||||| || | ||||| |||||||| ||||||| Sbjct: 48 gacaagacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaac 107 Query: 366 tacaggcttctgtatgacaccaagggccgcttccg 400 | | | ||||| ||||| |||||||| || ||||| Sbjct: 108 ttccgtcttctctatgataccaagggacgtttccg 142
>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project) Length = 104607 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 6994 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 7053 Query: 144 gg 145 || Sbjct: 7054 gg 7055 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatgg 333 ||||||||||| ||||||||||||||||||| Sbjct: 7321 actgacaagacttaccctgctggtttcatgg 7351
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9 Length = 86380 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 81717 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 81776 Query: 144 gg 145 || Sbjct: 81777 gg 81778 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatgg 333 ||||||||||| ||||||||||||||||||| Sbjct: 82044 actgacaagacttaccctgctggtttcatgg 82074
>gb|AC146554.5| Medicago truncatula clone mth2-9l7, complete sequence Length = 135334 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 153 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 212 ||||| ||||| |||||||| || ||||| | ||||| ||||| ||| ||||||| ||| Sbjct: 11566 gccccaaagccgtcatctggaccacacaaatctagggagtgccttcctttgatccttatc 11507 Query: 213 ctgaggaacagactgaaatacgctctcac 241 ||||||||||||| ||||| |||||||| Sbjct: 11506 ttgaggaacagactaaaatatgctctcac 11478 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 81 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 140 ||||||||||| ||| ||||| |||||||||| || |||||||||||||| |||||| Sbjct: 11737 ggtttgaagaaacatttgaagcggctcaatgctccaaaacattggatgcttgataagctt 11678 Query: 141 ggtgg 145 ||||| Sbjct: 11677 ggtgg 11673
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 81 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 140 ||||||||||||||| |||||||||||||||| || |||||||||||||| || ||| Sbjct: 47817 ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 47876 Query: 141 ggtgg 145 ||||| Sbjct: 47877 ggtgg 47881 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatgg 333 ||||||||||| ||||||||||||||||||| Sbjct: 48122 actgacaagacttaccctgctggtttcatgg 48152
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 77167 gatggcaaggtccgaactgacaaaacctaccctgctggattcatgga 77213
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence Length = 121575 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 38935 gatggcaaggtccgaactgacaaaacctaccctgctggattcatgga 38889
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 261 atccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccct 320 ||||| |||||||||||| ||| || ||| || |||||| | ||||||| |||||||| Sbjct: 23697 atcctaatgcagcgtcatgttaaggttgacggtaaggtcagaactgacactacctaccca 23638 Query: 321 gctggtttcatgga 334 |||||||||||||| Sbjct: 23637 gctggtttcatgga 23624
>ref|NM_209058.1| Eremothecium gossypii ADL391Cp (ADL391C), mRNA Length = 786 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 261 atccttatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccct 320 ||||| |||||||||||| ||| || ||| || |||||| | ||||||| |||||||| Sbjct: 190 atcctaatgcagcgtcatgttaaggttgacggtaaggtcagaactgacactacctaccca 249 Query: 321 gctggtttcatgga 334 |||||||||||||| Sbjct: 250 gctggtttcatgga 263
>ref|XM_657306.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4794.2), mRNA Length = 720 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 294 aaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 157 aaggtccgcactgacccgacctaccctgccggtttcatgga 197
>gb|BT014201.1| Lycopersicon esculentum clone 133378R, mRNA sequence Length = 1292 Score = 56.0 bits (28), Expect = 9e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 309 aagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactac 368 ||||| ||||||||||||||||||||| || || ||||||| ||||| ||||| || | Sbjct: 318 aagacttaccctgctggtttcatggacgttgttactattccaaagacgaatgagagcttc 377 Query: 369 aggcttctgtatgacaccaagggccgcttccg 400 | ||||| |||||||| ||||| || ||||| Sbjct: 378 cgacttctttatgacactaagggtcggttccg 409 Score = 56.0 bits (28), Expect = 9e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 84 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 143 |||||||| ||| | |||||||||||||| || |||||||||||||| || || || Sbjct: 93 ttgaagaaacatttaaagaggctcaatgcgcctaagcattggatgcttgataaactcgga 152 Query: 144 ggagcttttgcccccaagccatcatctggtcc 175 || |||||||| |||||||| || |||||||| Sbjct: 153 ggtgcttttgctcccaagccttcttctggtcc 184
>ref|XM_986316.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC229746), mRNA Length = 908 Score = 56.0 bits (28), Expect = 9e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 228 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185 Query: 229 aata 232 |||| Sbjct: 186 aata 189
>ref|XM_124146.6| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC229746), mRNA Length = 908 Score = 56.0 bits (28), Expect = 9e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 228 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185 Query: 229 aata 232 |||| Sbjct: 186 aata 189
>emb|BX833645.1|CNS0A1VP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatgga 334 ||||||||||| |||||||||||||||||||| Sbjct: 230 actgacaagacttaccctgctggtttcatgga 261
>gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, complete sequence Length = 200232 Score = 56.0 bits (28), Expect = 9e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 228 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 17770 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 17829 Query: 229 aata 232 |||| Sbjct: 17830 aata 17833
>gb|AC140323.3| Mus musculus BAC clone RP24-325G15 from 3, complete sequence Length = 182942 Score = 56.0 bits (28), Expect = 9e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 228 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 175838 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 175897 Query: 229 aata 232 |||| Sbjct: 175898 aata 175901
>emb|AL133396.2| Human DNA sequence from clone RP5-1068H6 on chromosome 20p12.1-13 Contains part of a ribosomal protein S4 pseudogene, the PRNP gene for prion protein (p27-30) (Creutzfeld-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia), the PRND gene for prion protein 2 (dublet), a novel gene, an isopentenyl-diphosphate delta isomerase 1 (IDI1) pseudogene and two CpG islands, complete sequence Length = 148497 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 396 gatggcaaggtccgcactgatataacctaccctgctggattcatgga 350
>gb|AF402812.1| Ictalurus punctatus 40S ribosomal protein S4 mRNA, complete cds Length = 861 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||||||||||| |||||||||||||| || ||||| Sbjct: 225 gatggcaaggtccgcactgacatcacctaccctgctggatttatgga 271
>ref|NG_000950.1| Homo sapiens ribosomal protein S4-like 2 (RPS4L2) pseudogene on chromosome 20 Length = 712 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 317 gatggcaaggtccgcactgatataacctaccctgctggattcatgga 363
>emb|BX824247.1|CNS0A6X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1168 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 303 actgacaagacctaccctgctggtttcatgg 333 ||||||||||| ||||||||||||||||||| Sbjct: 929 actgacaagacttaccctgctggtttcatgg 899
>gb|BC106152.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:118104 IMAGE:3669367), complete cds Length = 917 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 105 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 162
>gb|BC009100.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:6575 IMAGE:3482299), complete cds Length = 925 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 129 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 186
>ref|NM_009094.1| Mus musculus ribosomal protein S4, X-linked (Rps4x), mRNA Length = 885 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 161
>ref|XR_002810.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC670119), mRNA Length = 962 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 172
>ref|XR_004627.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC674228), mRNA Length = 959 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 172
>ref|XR_002019.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC667398), mRNA Length = 962 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 172
>ref|XR_004017.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC434180), mRNA Length = 892 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 124 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 181
>ref|XM_001004419.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 2 (LOC668668), mRNA Length = 876 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 110 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 167
>ref|XM_001004416.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC668668), mRNA Length = 829 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 180
>ref|XM_916606.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC637070), mRNA Length = 888 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 180
>ref|XM_749829.1| Aspergillus fumigatus Af293 cytosolic small ribosomal subunit S4 (Afu3g06840) partial mRNA Length = 786 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 294 aaggtccgcactgacaagacctaccctgctggtttcatggac 335 ||||||||||||||| |||||||| ||||||||||||||| Sbjct: 223 aaggtccgcactgaccctacctaccccgctggtttcatggac 264
>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence Length = 171737 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 23328 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 23385
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 117114 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 117057
>dbj|AK135369.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820407G10 product:ribosomal protein S4, X-linked, full insert sequence Length = 907 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 182
>dbj|AK153211.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830127J02 product:ribosomal protein S4, X-linked, full insert sequence Length = 897 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 116 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 173
>dbj|AK010921.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510006L12 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 903 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 179
>dbj|AK010676.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410045N08 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 898 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 179
>dbj|AK010624.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030O13 product:ribosomal protein S4, X-linked, full insert sequence Length = 906 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 182
>dbj|AK088410.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430016A18 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 898 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 179
>dbj|AK002445.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610010B10 product:ribosomal protein S4, X-linked, full insert sequence Length = 903 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 179
>dbj|AK012429.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054P13 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 902 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 179
>dbj|AK014210.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110053C10 product:ribosomal protein S4, X-linked, full insert sequence Length = 901 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 120 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 177
>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete sequence Length = 174990 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 83378 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 83321
>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence Length = 199767 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 16416 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 16359
>gb|BC089349.1| Mus musculus cDNA clone MGC:102174 IMAGE:6819603, complete cds Length = 909 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 164
>dbj|D11087.1|HAMRPS4 Mesocricetus sp. RPS4 mRNA for ribosomal protein S4, complete cds Length = 970 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||| ||||||||| |||||||| |||||||||||| | |||||||||||||||| Sbjct: 119 ctggccctcacaagctgagggaatgtctgcctctgatcattttcctgaggaacagact 176 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tatgacaccaagggccgctt 397 |||||||||||||||||||| Sbjct: 328 tatgacaccaagggccgctt 347
>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence Length = 146713 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 7666 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 7609
>gb|BC089348.1| Mus musculus cDNA clone IMAGE:5709768, containing frame-shift errors Length = 919 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 164
>gb|M73436.1|MUSRSP4 Mouse ribosomal protein S4 (Rps4) mRNA, complete CDS Length = 885 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 161
>gb|BC086560.1| Rattus norvegicus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:105788 IMAGE:7303578), complete cds Length = 915 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagact 226 ||||||||||||||||||||| | |||| ||||||||||| Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagact 155
>ref|XM_536580.2| PREDICTED: Canis familiaris ribosomal protein S4, transcript variant 1 (RPS4), mRNA Length = 865 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 266 tatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctgg 325 |||||||||| ||||| | |||||| |||||||| ||||| | |||||||||||||| Sbjct: 206 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 265 Query: 326 tttcatgga 334 ||| ||||| Sbjct: 266 ttttatgga 274
>ref|XM_844428.1| PREDICTED: Canis familiaris ribosomal protein S4, transcript variant 2 (RPS4), mRNA Length = 1129 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 266 tatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctgg 325 |||||||||| ||||| | |||||| |||||||| ||||| | |||||||||||||| Sbjct: 470 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 529 Query: 326 tttcatgga 334 ||| ||||| Sbjct: 530 ttttatgga 538
>ref|XM_537399.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S4, X isoform (LOC480276), mRNA Length = 854 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 266 tatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctgg 325 |||||||||| ||||| | |||||| |||||||| ||||| | |||||||||||||| Sbjct: 214 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 273 Query: 326 tttcatgga 334 ||| ||||| Sbjct: 274 ttttatgga 282
>ref|NM_001007600.1| Rattus norvegicus ribosomal protein S4, X-linked (Rps4x), mRNA Length = 915 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagact 226 ||||||||||||||||||||| | |||| ||||||||||| Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagact 155
>emb|X14210.1|RNRPS4 Rat mRNA for ribosomal protein S4 Length = 907 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagact 226 ||||||||||||||||||||| | |||| ||||||||||| Sbjct: 136 agggaatgcctgcctctgatcattttcctaaggaacagact 176
>gb|U22232.1|FCU22232 Felis domesticus ribosomal protein S4 mRNA, partial cds Length = 853 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 266 tatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctgg 325 |||||||||| ||||| | |||||| |||||||| ||||| | |||||||||||||| Sbjct: 192 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 251 Query: 326 tttcatgga 334 ||| ||||| Sbjct: 252 ttttatgga 260
>dbj|D50108.1| Canis familiaris mRNA for ribosomal protein S4, partial cds Length = 581 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 266 tatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctgg 325 |||||||||| ||||| | |||||| |||||||| ||||| | |||||||||||||| Sbjct: 138 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 197 Query: 326 tttcatgga 334 ||| ||||| Sbjct: 198 ttttatgga 206
>dbj|D50106.1| Felis catus mRNA for ribosomal protein S4, partial cds Length = 581 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 266 tatgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctgg 325 |||||||||| ||||| | |||||| |||||||| ||||| | |||||||||||||| Sbjct: 138 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 197 Query: 326 tttcatgga 334 ||| ||||| Sbjct: 198 ttttatgga 206
>ref|XM_509549.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC452446), mRNA Length = 535 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 287 tgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 147 tgatggcaaggtccgaactgatataacctaccctgctgggttcatgga 194
>ref|XM_865957.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S4, X isoform (LOC614449), mRNA Length = 828 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 287 tgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||| || ||||||||||| | ||||||||||||||||| ||||| Sbjct: 227 tgatggcaaagtccgcactgatataacctaccctgctggttttatgga 274
>gb|AY389948.1| Protopterus dolloi ribosomal protein S4 mRNA, partial cds Length = 715 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 287 tgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||| ||||||||||| |||| ||||| ||| ||||||||||||| Sbjct: 187 tgatggtaaggtccgcaccgacatcacctatccttctggtttcatgga 234
>gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, complete sequence Length = 153471 Score = 48.1 bits (24), Expect = 0.022 Identities = 48/56 (85%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 224 |||||||||||||| ||||||||| ||||||||||| | |||| ||||||||| Sbjct: 31001 ctggtcctcacaagctgagggaatgcttgcctctgatcattttcctaaggaacaga 30946
>emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chromosome 4, complete sequence Length = 78456 Score = 48.1 bits (24), Expect = 0.022 Identities = 48/56 (85%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 224 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||| Sbjct: 2094 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacaga 2039
>ref|XM_521131.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC465710), mRNA Length = 863 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 226 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 272
>gb|BC000472.2| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:8636 IMAGE:2961540), complete cds Length = 889 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 225 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 271
>gb|BC007308.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone IMAGE:3352599), partial cds Length = 822 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 157 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 203
>gb|BC000236.1| Homo sapiens translin-associated factor X, mRNA (cDNA clone IMAGE:3351964), **** WARNING: chimeric clone **** Length = 2323 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 1642 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 1688
>ref|NM_001007.3| Homo sapiens ribosomal protein S4, X-linked (RPS4X), mRNA Length = 977 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 313 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 359
>gb|BC100904.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:119099 IMAGE:40003601), complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>gb|BC100903.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:119098 IMAGE:40003600), complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>emb|CR601794.1| full-length cDNA clone CS0DI031YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 858 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR623958.1| full-length cDNA clone CS0DE004YB10 of Placenta of Homo sapiens (human) Length = 1896 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR620411.1| full-length cDNA clone CS0DE011YG15 of Placenta of Homo sapiens (human) Length = 1386 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>dbj|AK097914.1| Homo sapiens cDNA FLJ40595 fis, clone THYMU2010705, highly similar to 40S RIBOSOMAL PROTEIN S4, X ISOFORM Length = 2747 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 2114 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 2160
>emb|CR597791.1| full-length cDNA clone CS0DI068YM24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 848 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR595707.1| full-length cDNA clone CL0BB017ZH01 of Neuroblastoma of Homo sapiens (human) Length = 858 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR456735.1| Homo sapiens full open reading frame cDNA clone RZPDo834G036D for gene RPS4X, ribosomal protein S4, X-linked; complete cds, incl. stopcodon Length = 792 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>dbj|AK222479.1| Homo sapiens mRNA for ribosomal protein S4, X-linked X isoform variant, clone: adKA01615 Length = 900 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 242 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 288
>gb|BC071662.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:87857 IMAGE:5505465), complete cds Length = 905 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 254 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 300
>gb|M58458.1|HUMRPS4X Human ribosomal protein S4 (RPS4X) isoform mRNA, complete cds Length = 888 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 252 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 298
>gb|M22146.1|HUMSCAR Human scar protein mRNA, complete cds Length = 864 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 222 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 268
>dbj|AB024285.1| Macaca fuscata mRNA for ribosomal protein S4X (RPS4X), complete cds Length = 853 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>dbj|D50104.1| Macaca fuscata mRNA for ribosomal protein S4, partial cds Length = 581 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 160 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 206
>dbj|AB015610.1| Chlorocebus aethiops mRNA for ribosomal protein S4X, complete cds Length = 878 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 240 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 286
>ref|XR_002591.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC546380), mRNA Length = 917 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagact 182
>ref|XR_002550.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC225134), mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| Sbjct: 121 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagact 178
>ref|XR_003977.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC672743), mRNA Length = 928 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| |||||||||| |||||| ||| | |||| ||||||||||| Sbjct: 98 ctggtcctcacaagctgagggaatgcccgcctctcatcattttcctaaggaacagact 155
>emb|AL135749.3|HSN14 Homo sapiens chromosome X sequence from BAC CEPHB197N14 region PHKA1-DXS227 map Xq13, complete sequence Length = 156655 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 333 ||||| |||||||| ||||| | |||||||||||||| ||||||| Sbjct: 89478 gatggcaaggtccgaactgatataacctaccctgctggattcatgg 89433
>dbj|AB226297.1| Aspergillus oryzae cDNA, contig sequence: AoEST3159 Length = 1183 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 294 aaggtccgcactgacaagacctaccctgctggtttcatggac 335 ||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 287 aaggtccgcactgaccctaccttccccgctggtttcatggac 328
>dbj|AB225754.1| Aspergillus oryzae cDNA, contig sequence: AoEST2609 Length = 644 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 294 aaggtccgcactgacaagacctaccctgctggtttcatggac 335 ||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 270 aaggtccgcactgaccctaccttccccgctggtttcatggac 311
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Minus Query: 294 aaggtccgcactgacaagacctaccctgctggtttcatggac 335 ||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 776621 aaggtccgcactgaccctaccttccccgctggtttcatggac 776580
>emb|CR391662.1| Gallus gallus finished cDNA, clone ChEST418k16 Length = 856 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgc 235 ||||||||||| || |||||| || ||||| ||||||| ||||| ||||| Sbjct: 123 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaagtacgc 172
>emb|BX930717.1| Gallus gallus finished cDNA, clone ChEST374l2 Length = 805 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgc 235 ||||||||||| || |||||| || ||||| ||||||| ||||| ||||| Sbjct: 120 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaagtacgc 169
>emb|AL929051.24| Mouse DNA sequence from clone RP23-418P21 on chromosome 2, complete sequence Length = 148072 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| |||||||||| |||||| ||| | |||| ||||||||||| Sbjct: 62374 ctggtcctcacaagctgagggaatgcccgcctctcatcattttcctaaggaacagact 62317
>ref|NM_205108.1| Gallus gallus ribosomal protein S4 (LOC396001), mRNA Length = 852 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgc 235 ||||||||||| || |||||| || ||||| ||||||| ||||| ||||| Sbjct: 119 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaagtacgc 168
>gb|AF511169.1| Sus scrofa clone UMNp272 microsatellite sequence Length = 299 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 aagcttggtggagcttttgccc 156 |||||||||||||||||||||| Sbjct: 203 aagcttggtggagcttttgccc 182
>gb|AF041428.1|AF041428 Homo sapiens ribosomal protein s4 X isoform gene, complete cds Length = 8542 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 333 ||||| |||||||| ||||| | |||||||||||||| ||||||| Sbjct: 3473 gatggcaaggtccgaactgatataacctaccctgctggattcatgg 3518
>gb|AC148013.3| Mus musculus BAC clone RP23-134C2 from 18, complete sequence Length = 192504 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| Sbjct: 102468 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagact 102411
>gb|L24368.1|CHKRPS4A Gallus gallus (clone pDP1435) domesticus ribosomal protein S4 mRNA, complete cds Length = 852 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 186 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatacgc 235 ||||||||||| || |||||| || ||||| ||||||| ||||| ||||| Sbjct: 119 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaagtacgc 168
>emb|AL731648.6| Mouse DNA sequence from clone RP23-35I10 on chromosome X, complete sequence Length = 119995 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Minus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| Sbjct: 90006 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagact 89949
>gb|AC154049.1| Drosophila melanogaster clone BACR23M02, complete sequence Length = 126566 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggagg 26 |||||||||||| |||||||||||| Sbjct: 108354 gaggagaaggaggaggcggcggagg 108378
>gb|AY123145.1| Physcomitrella patens phytochrome (phy4) gene, complete cds Length = 5863 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggagg 26 |||||||||||||||| |||||||| Sbjct: 167 gaggagaaggagcaggaggcggagg 191
>gb|AC182396.3| Pan troglodytes BAC clone CH251-244D19 from chromosome 16, complete sequence Length = 175231 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gaggagaaggagcaggcggcggagg 26 |||||||||||| |||||||||||| Sbjct: 72820 gaggagaaggaggaggcggcggagg 72796
>gb|BC114807.1| Bos taurus cDNA clone MGC:140092 IMAGE:8056482, complete cds Length = 1504 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 15 aggcggcggaggtgcccgaagaggagaag 43 |||||||||||| ||||||| |||||||| Sbjct: 69 aggcggcggaggggcccgaaaaggagaag 41
>gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156096 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggagg 26 |||||||||||| |||||||||||| Sbjct: 11427 gaggagaaggaggaggcggcggagg 11451
>gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromosome 16, complete sequence Length = 194406 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggagg 26 |||||||||||| |||||||||||| Sbjct: 85698 gaggagaaggaggaggcggcggagg 85722
>gb|AC092287.4| Homo sapiens chromosome 16 clone CTD-2288F12, complete sequence Length = 116478 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggagg 26 |||||||||||| |||||||||||| Sbjct: 89786 gaggagaaggaggaggcggcggagg 89810
>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete sequence Length = 334222 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gaggagaaggagcaggcggcggagg 26 |||||||||||| |||||||||||| Sbjct: 174961 gaggagaaggaggaggcggcggagg 174937
>gb|DQ333035.1| Synthetic construct Saccharomyces cerevisiae clone FLH115330.01X RPS4B gene, complete sequence Length = 1055 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggac 335 ||||||| |||||||| ||||||||||||||| Sbjct: 501 actgacaccacctacccagctggtttcatggac 533
>gb|U00030.1|YSCH9998 Saccharomyces cerevisiae chromosome VIII cosmid 9998 Length = 35600 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 303 actgacaagacctaccctgctggtttcatggac 335 ||||||| |||||||| ||||||||||||||| Sbjct: 31858 actgacaccacctacccagctggtttcatggac 31826
>gb|M64294.1|YSCRPS7A S.cerevisiae ribosomal protein S7 gene, exons 1 and 2 Length = 1169 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 303 actgacaagacctaccctgctggtttcatggac 335 ||||||| |||||||| ||||||||||||||| Sbjct: 575 actgacaccacctacccagctggtttcatggac 607
>dbj|D50110.1| Porcine mRNA for ribosomal protein S4, partial cds Length = 581 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 294 aaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||||||||||| | |||||||| |||||||| ||||| Sbjct: 166 aaggtccgcactgatataacctaccccgctggttttatgga 206
>dbj|D50109.1| Equus caballus mRNA for ribosomal protein S4, partial cds Length = 581 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 294 aaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 166 aaggtccgaactgatataacctaccctgctggttttatgga 206
>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence Length = 178764 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ccaagccatcatctggtcct 176 |||||||||||||||||||| Sbjct: 127679 ccaagccatcatctggtcct 127660
>gb|AC110035.8| Mus musculus chromosome 1, clone RP23-237M24, complete sequence Length = 172559 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ccaagccatcatctggtcct 176 |||||||||||||||||||| Sbjct: 1512 ccaagccatcatctggtcct 1493
>gb|BC081584.1| Danio rerio ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:92076 IMAGE:7046733), complete cds Length = 888 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccc 319 ||||| |||||||||||||||| |||||||| Sbjct: 224 gatggcaaggtccgcactgacatcacctaccc 255
>gb|AC169500.3| Mus musculus chromosome 5, clone wi1-1024F3, complete sequence Length = 45013 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gggtttgaagaagcatctga 99 |||||||||||||||||||| Sbjct: 30049 gggtttgaagaagcatctga 30068
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gatggaaaggtccgcactga 307 |||||||||||||||||||| Sbjct: 2447214 gatggaaaggtccgcactga 2447195
>ref|XM_529275.1| PREDICTED: Pan troglodytes similar to RPS4Y2 (LOC473900), mRNA Length = 2259 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 taccctgctggtttcatggacatt 338 ||||||||||| |||||||||||| Sbjct: 1564 taccctgctggattcatggacatt 1587
>ref|XM_523868.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC468479), mRNA Length = 1281 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 acctaccctgctggtttcatggac 335 |||||||||||||| ||||||||| Sbjct: 541 acctaccctgctggattcatggac 564
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gatggaaaggtccgcactga 307 |||||||||||||||||||| Sbjct: 2448079 gatggaaaggtccgcactga 2448060
>gb|AY738150.1| Cercopithecus aethiops apolipoprotein E precursor, gene, partial cds Length = 976 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 573 gaggtgaaggagcaggtggcggaggtgc 600
>ref|XM_959158.1| Neurospora crassa OR74A ribosomal protein YS7 (NCU02181.1) partial mRNA Length = 450 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatggac 335 ||||| ||||||||||| |||| |||||||| || || ||||||||| Sbjct: 226 gatggcaaggtccgcaccgacatcacctaccccgccggcttcatggac 273
>ref|NM_000041.2| Homo sapiens apolipoprotein E (APOE), mRNA Length = 1223 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 828 gaggtgaaggagcaggtggcggaggtgc 855
>gb|BC003557.1| Homo sapiens apolipoprotein E, mRNA (cDNA clone MGC:1571 IMAGE:3355712), complete cds Length = 1186 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 790 gaggtgaaggagcaggtggcggaggtgc 817
>ref|XM_329370.1| Neurospora crassa OR74A hypothetical protein ( ribosomal protein YS7 homolog - Emericella nidulans ) (NCU02181.1) partial mRNA Length = 450 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccctgctggtttcatggac 335 ||||| ||||||||||| |||| |||||||| || || ||||||||| Sbjct: 226 gatggcaaggtccgcaccgacatcacctaccccgccggcttcatggac 273
>ref|XR_003920.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC635803), mRNA Length = 788 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 187 gggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||| | |||| ||||||||||| Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagact 155
>ref|XR_002186.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC635803), mRNA Length = 788 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 187 gggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||| | |||| ||||||||||| Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagact 155
>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete sequence Length = 169661 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tatgacaccaagggccgctt 397 |||||||||||||||||||| Sbjct: 23731 tatgacaccaagggccgctt 23750 Score = 40.1 bits (20), Expect = 5.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 224 |||||||||||| | ||||||||||||||||| ||| | |||| ||||||||| Sbjct: 23522 ctggtcctcacaggctgagggaatgcctgcctctcatcattttcctaaggaacaga 23577
>ref|XM_446360.1| Candida glabrata CBS138, CAGL0F09031g partial mRNA Length = 786 Score = 40.1 bits (20), Expect = 5.4 Identities = 56/68 (82%) Strand = Plus / Plus Query: 267 atgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctggt 326 ||||| |||||| ||| || ||| || |||||| | |||||| |||||||| |||||| Sbjct: 196 atgcaacgtcatgttaaggttgacggtaaggtcagaactgacgctacctacccagctggt 255 Query: 327 ttcatgga 334 |||||||| Sbjct: 256 ttcatgga 263
>gb|K00396.1|HUMAPOE3 Homo sapiens preapolipoprotein E (APOE) mRNA, complete cds Length = 1156 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 805 gaggtgaaggagcaggtggcggaggtgc 832
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence Length = 186870 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tatgacaccaagggccgctt 397 |||||||||||||||||||| Sbjct: 169225 tatgacaccaagggccgctt 169244 Score = 40.1 bits (20), Expect = 5.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 169 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 224 |||||||||||| | ||||||||||||||||| ||| | |||| ||||||||| Sbjct: 169016 ctggtcctcacaggctgagggaatgcctgcctctcatcattttcctaaggaacaga 169071
>ref|NM_001005589.1| Danio rerio ribosomal protein S4, X-linked (rps4x), mRNA Length = 888 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 288 gatggaaaggtccgcactgacaagacctaccc 319 ||||| |||||||||||||||| |||||||| Sbjct: 224 gatggcaaggtccgcactgacatcacctaccc 255
>ref|XM_536183.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC479033), mRNA Length = 884 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 287 tgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||| ||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 231 tgatggcaaggtccaaactgatatcacctaccctgctggttttatgga 278
>ref|XM_854470.1| PREDICTED: Canis familiaris similar to 40S ribosomal protein S4, X isoform, transcript variant 2 (LOC479033), mRNA Length = 751 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 287 tgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||| ||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 218 tgatggcaaggtccaaactgatatcacctaccctgctggttttatgga 265
>gb|BC072022.1| Homo sapiens cDNA clone IMAGE:6263100, **** WARNING: chimeric clone **** Length = 1550 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 1158 gaggtgaaggagcaggtggcggaggtgc 1185
>emb|X13887.1|MFAPOE Monkey mRNA for apolipoprotein E Length = 1178 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 827 gaggtgaaggagcaggtggcggaggtgc 854
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 40.1 bits (20), Expect = 5.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 267 atgcagcgtcatattatggctgatggaaaggtccgcactgacaagacctaccctgctggt 326 ||||| |||||| ||| || ||| || |||||| | |||||| |||||||| |||||| Sbjct: 886108 atgcaacgtcatgttaaggttgacggtaaggtcagaactgacgctacctacccagctggt 886049 Query: 327 ttcatgga 334 |||||||| Sbjct: 886048 ttcatgga 886041
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ggagaaggagcaggcggcgg 23 |||||||||||||||||||| Sbjct: 27373 ggagaaggagcaggcggcgg 27392
>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20, complete sequence Length = 86384 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tcatggacattatttctatt 347 |||||||||||||||||||| Sbjct: 3419 tcatggacattatttctatt 3400
>emb|CR609307.1| full-length cDNA clone CS0DH003YG13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 798 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 287 tgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||| ||||| || ||||| | |||||||||||||| |||||||| Sbjct: 211 tgatggcaaggtacgaactgatataacctaccctgctggattcatgga 258
>dbj|AK148570.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120409G09 product:unclassifiable, full insert sequence Length = 2900 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ccaagccatcatctggtcct 176 |||||||||||||||||||| Sbjct: 243 ccaagccatcatctggtcct 224
>gb|AC008925.4| Homo sapiens chromosome 5 clone CTD-2284O10, complete sequence Length = 131990 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 287 tgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 334 |||||| ||||| || ||||| | |||||||||||||| |||||||| Sbjct: 49768 tgatggcaaggtacgaactgatataacctaccctgctggattcatgga 49815
>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15, complete sequence Length = 164720 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tttcatggacattatttcta 345 |||||||||||||||||||| Sbjct: 93781 tttcatggacattatttcta 93800
>gb|AY857461.1| Suberites domuncula S4 mRNA, complete cds Length = 786 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cattggatgcttgacaagct 139 |||||||||||||||||||| Sbjct: 49 cattggatgcttgacaagct 68
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 1 agaggagaaggagcaggcggcggaggtg 28 |||||||||||||| |||||||| |||| Sbjct: 7214543 agaggagaaggagccggcggcggcggtg 7214516
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gaagaggagaagcacggcga 51 |||||||||||||||||||| Sbjct: 16168156 gaagaggagaagcacggcga 16168137
>gb|AC011481.4|AC011481 Homo sapiens chromosome 19 clone CTB-129P6, complete sequence Length = 107567 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 51865 gaggtgaaggagcaggtggcggaggtgc 51892
>gb|AC012592.10| Homo sapiens BAC clone RP11-381F16 from 2, complete sequence Length = 155682 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aagtgcaatctatccttatg 269 |||||||||||||||||||| Sbjct: 129009 aagtgcaatctatccttatg 129028
>gb|AF200508.1|AF200506S3 Hylobates lar apolipoprotein E (APOE) gene, exon 4 and complete cds Length = 718 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 509 gaggtgaaggagcaggtggcggaggtgc 536
>gb|AF200502.1|AF200500S3 Gorilla gorilla apolipoprotein E (APOE) gene, exon 4 and complete cds Length = 718 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 509 gaggtgaaggagcaggtggcggaggtgc 536
>gb|AF200499.1|AF200497S3 Pan troglodytes apolipoprotein E (APOE) gene, exon 4 and complete cds Length = 718 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 509 gaggtgaaggagcaggtggcggaggtgc 536
>gb|AF261280.1|AF261280 Pan troglodytes apolipoprotein-E gene, complete cds Length = 5413 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 4333 gaggtgaaggagcaggtggcggaggtgc 4360
>gb|AF261279.1|AF261279 Homo sapiens apolipoprotein-E gene, complete cds Length = 5491 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 4294 gaggtgaaggagcaggtggcggaggtgc 4321
>ref|NM_001009007.1| Pan troglodytes apolipoprotein E (APOE), mRNA Length = 1012 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 803 gaggtgaaggagcaggtggcggaggtgc 830
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0040M10 Length = 162790 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gaagaggagaagcacggcga 51 |||||||||||||||||||| Sbjct: 72949 gaagaggagaagcacggcga 72930
>emb|BX510368.7| Zebrafish DNA sequence from clone DKEY-190P19 in linkage group 20, complete sequence Length = 84687 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tcatggacattatttctatt 347 |||||||||||||||||||| Sbjct: 29 tcatggacattatttctatt 10
>gb|AF200505.1|AF200503S3 Pongo pygmaeus apolipoprotein E (APOE) gene, exon 4 and complete cds Length = 718 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 509 gaggtgaaggagcaggtggcggaggtgc 536
>gb|AF050154.1|AF050154 Homo sapiens clone F19374 APO E-C2 gene cluster, complete sequence Length = 41907 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 21607 gaggtgaaggagcaggtggcggaggtgc 21634
>emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chromosome 7, complete sequence Length = 178673 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 187 gggaatgcctgcctctgatcctcatcctgaggaacagact 226 |||||||||||||| ||||| | |||| ||||||||||| Sbjct: 66672 gggaatgcctgcctatgatcattttcctaaggaacagact 66711
>dbj|AP005899.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-143J12, complete sequence Length = 155671 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 acctaccctgctggtttcatggac 335 |||||||||||||| ||||||||| Sbjct: 54386 acctaccctgctggattcatggac 54409
>emb|CR388097.9| Zebrafish DNA sequence from clone CH211-10J9 in linkage group 3, complete sequence Length = 195927 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tttcatggacattatttcta 345 |||||||||||||||||||| Sbjct: 193565 tttcatggacattatttcta 193584
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 1 agaggagaaggagcaggcggcggaggtg 28 |||||||||||||| |||||||| |||| Sbjct: 7214422 agaggagaaggagccggcggcggcggtg 7214395
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 agaggagaaggagcaggcggcggaggtg 28 |||||||||||||| |||||||| |||| Sbjct: 41568 agaggagaaggagccggcggcggcggtg 41595
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 1 agaggagaaggagcaggcggcggaggtg 28 |||||||||||||| |||||||| |||| Sbjct: 70856 agaggagaaggagccggcggcggcggtg 70829
>gb|M12529.1|HUMAPOE Human apolipoprotein E mRNA, complete cds Length = 1157 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 806 gaggtgaaggagcaggtggcggaggtgc 833
>gb|M10065.1|HUMAPOE4 Human apolipoprotein E (epsilon-4 allele) gene, complete cds Length = 5515 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 4289 gaggtgaaggagcaggtggcggaggtgc 4316
>gb|AC131574.4| Homo sapiens chromosome 11, clone RP11-957H15, complete sequence Length = 166214 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 atggacattatttctattcc 349 |||||||||||||||||||| Sbjct: 8813 atggacattatttctattcc 8832
>gb|M29322.1|BABAPOE Baboon apolipoprotein E (ApoE) gene, complete cds Length = 4762 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gaggagaaggagcaggcggcggaggtgc 29 |||| ||||||||||| ||||||||||| Sbjct: 3975 gaggtgaaggagcaggtggcggaggtgc 4002 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,451,064 Number of Sequences: 3902068 Number of extensions: 3451064 Number of successful extensions: 65364 Number of sequences better than 10.0: 228 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64560 Number of HSP's gapped (non-prelim): 721 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
