ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart35g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predic... 109 1e-20
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
3dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
4dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
5ref|XM_468692.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 2e-06
7gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 62 2e-06
8gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CU... 62 2e-06
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10ref|NM_191572.1| Oryza sativa (japonica cultivar-group), predic... 44 0.47
11dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 44 0.47
12dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
13dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
14dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
15ref|XM_473042.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
16ref|XM_753137.1| Ustilago maydis 521 hypothetical protein (UM020... 42 1.9
17gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.9
18gb|AC133337.5| Oryza sativa chromosome 3 BAC OSJNBa0023A13 genom... 42 1.9
19emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segmen... 42 1.9
20emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 42 1.9
21gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.9
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
23gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genom... 42 1.9
24dbj|AK121024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
25dbj|AK062706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
26emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 42 1.9
27gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.4
28gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
29gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
30ref|XM_369003.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 7.4
31gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.4
32emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100... 40 7.4
33dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 7.4
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
35gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z21... 40 7.4
36gb|AC110740.15| Mus musculus chromosome 8, clone RP24-421B13, co... 40 7.4
37gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosom... 40 7.4
38emb|AL663077.8| Mouse DNA sequence from clone RP23-22K4 on chrom... 40 7.4 
>ref|XM_463421.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score =  109 bits (55), Expect = 1e-20
 Identities = 135/161 (83%), Gaps = 3/161 (1%)
 Strand = Plus / Plus

                                                                       
Query: 194 gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
           ||||||||||||||||||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 79  gtctccatgatcgagctcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 138

                                                                       
Query: 254 ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
            || | ||||| |||||||   |||||||||| ||||| || ||||||||||||||| ||
Sbjct: 139 gtcgtcgacccaccgtacggcaacaccggcgcgacggggcctttcctcgccggcgtcacc 198

                                                    
Query: 311 gcggccaacccctccatcactttccaccgtctacccaaggt 351
           |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 199 gcggccaacccggccatgacgttccaccgtctgccgaaggt 239



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                       
Query: 394 ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcctccccggacgt 453
           |||| ||||||||||||||||   ||| | |||||||||| ||||||||||||||| |||
Sbjct: 288 ggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctccccggtcgt 347

                                          
Query: 454 cctcgtgttggacttcttctgcagcgccgcc 484
           |||| |  | ||||||||||||| |||||||
Sbjct: 348 cctcatcatcgacttcttctgcaacgccgcc 378
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  109 bits (55), Expect = 1e-20
 Identities = 135/161 (83%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                            
Query: 194      gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
                ||||||||||||||||||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 28842838 gtctccatgatcgagctcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 28842779

                                                                            
Query: 254      ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
                 || | ||||| |||||||   |||||||||| ||||| || ||||||||||||||| ||
Sbjct: 28842778 gtcgtcgacccaccgtacggcaacaccggcgcgacggggcctttcctcgccggcgtcacc 28842719

                                                         
Query: 311      gcggccaacccctccatcactttccaccgtctacccaaggt 351
                |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 28842718 gcggccaacccggccatgacgttccaccgtctgccgaaggt 28842678



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                            
Query: 394      ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcctccccggacgt 453
                |||| ||||||||||||||||   ||| | |||||||||| ||||||||||||||| |||
Sbjct: 28842629 ggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctccccggtcgt 28842570

                                               
Query: 454      cctcgtgttggacttcttctgcagcgccgcc 484
                |||| |  | ||||||||||||| |||||||
Sbjct: 28842569 cctcatcatcgacttcttctgcaacgccgcc 28842539



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 198      ccatgatcgagctcgccaagctcttc 223
                ||||| ||||||||||||||||||||
Sbjct: 30706955 ccatggtcgagctcgccaagctcttc 30706930



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 297      tcgccggcgtctccgcggccaacccctccatcactttccacc 338
                |||||||| || ||||  |||||||||||||||| |||||||
Sbjct: 30706856 tcgccggcatcgccgcctccaacccctccatcaccttccacc 30706815
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>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score =  109 bits (55), Expect = 1e-20
 Identities = 135/161 (83%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                         
Query: 194   gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
             ||||||||||||||||||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 60881 gtctccatgatcgagctcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 60822

                                                                         
Query: 254   ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
              || | ||||| |||||||   |||||||||| ||||| || ||||||||||||||| ||
Sbjct: 60821 gtcgtcgacccaccgtacggcaacaccggcgcgacggggcctttcctcgccggcgtcacc 60762

                                                      
Query: 311   gcggccaacccctccatcactttccaccgtctacccaaggt 351
             |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 60761 gcggccaacccggccatgacgttccaccgtctgccgaaggt 60721



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                         
Query: 394   ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcctccccggacgt 453
             |||| ||||||||||||||||   ||| | |||||||||| ||||||||||||||| |||
Sbjct: 60672 ggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctccccggtcgt 60613

                                            
Query: 454   cctcgtgttggacttcttctgcagcgccgcc 484
             |||| |  | ||||||||||||| |||||||
Sbjct: 60612 cctcatcatcgacttcttctgcaacgccgcc 60582
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>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full
           insert sequence
          Length = 1727

 Score =  109 bits (55), Expect = 1e-20
 Identities = 135/161 (83%), Gaps = 3/161 (1%)
 Strand = Plus / Plus

                                                                       
Query: 194 gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
           ||||||||||||||||||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 140 gtctccatgatcgagctcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 199

                                                                       
Query: 254 ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
            || | ||||| |||||||   |||||||||| ||||| || ||||||||||||||| ||
Sbjct: 200 gtcgtcgacccaccgtacggcaacaccggcgcgacggggcctttcctcgccggcgtcacc 259

                                                    
Query: 311 gcggccaacccctccatcactttccaccgtctacccaaggt 351
           |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 260 gcggccaacccggccatgacgttccaccgtctgccgaaggt 300



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                       
Query: 394 ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcctccccggacgt 453
           |||| ||||||||||||||||   ||| | |||||||||| ||||||||||||||| |||
Sbjct: 349 ggtcacccgcctctccaaccccggcctccgcgacttcctcgccggcgcctccccggtcgt 408

                                          
Query: 454 cctcgtgttggacttcttctgcagcgccgcc 484
           |||| |  | ||||||||||||| |||||||
Sbjct: 409 cctcatcatcgacttcttctgcaacgccgcc 439
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>ref|XM_468692.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 459

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 129/161 (80%), Gaps = 3/161 (1%)
 Strand = Plus / Plus

                                                                       
Query: 194 gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
           ||||||||||||||| ||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 121 gtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 180

                                                                       
Query: 254 ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
            || | ||||| || |||    ||||||| || |||||  | |||||| |||||||| ||
Sbjct: 181 gtcgtcgacccaccatacagcaacaccggtgcaacgggggctttcctcaccggcgtcacc 240

                                                    
Query: 311 gcggccaacccctccatcactttccaccgtctacccaaggt 351
           |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 241 gcggccaacccggccatgacgttccaccgtctgccgaaggt 281



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 394 ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcct 443
           |||| ||||||||||||||||   ||| | |||||||||| |||||||||
Sbjct: 330 ggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcgcct 379
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 129/161 (80%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                            
Query: 194      gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
                ||||||||||||||| ||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 17071250 gtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 17071191

                                                                            
Query: 254      ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
                 || | ||||| || |||    ||||||| || |||||  | |||||| |||||||| ||
Sbjct: 17071190 gtcgtcgacccaccatacagcaacaccggtgcaacgggggctttcctcaccggcgtcacc 17071131

                                                         
Query: 311      gcggccaacccctccatcactttccaccgtctacccaaggt 351
                |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 17071130 gcggccaacccggccatgacgttccaccgtctgccgaaggt 17071090



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 394      ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcct 443
                |||| ||||||||||||||||   ||| | |||||||||| |||||||||
Sbjct: 17071041 ggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcgcct 17070992



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 352      caagctcctcgactccgaccactccatga 380
                ||||||| || ||||||||||||||||||
Sbjct: 19865507 caagctcttctactccgaccactccatga 19865479
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>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
              sequence
          Length = 157662

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 129/161 (80%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                          
Query: 194    gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
              ||||||||||||||| ||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 101996 gtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 101937

                                                                          
Query: 254    ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
               || | ||||| || |||    ||||||| || |||||  | |||||| |||||||| ||
Sbjct: 101936 gtcgtcgacccaccatacagcaacaccggtgcaacgggggctttcctcaccggcgtcacc 101877

                                                       
Query: 311    gcggccaacccctccatcactttccaccgtctacccaaggt 351
              |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 101876 gcggccaacccggccatgacgttccaccgtctgccgaaggt 101836



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 394    ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcct 443
              |||| ||||||||||||||||   ||| | |||||||||| |||||||||
Sbjct: 101787 ggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcgcct 101738
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>gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CULM1 (BC1) gene,
           complete cds
          Length = 4498

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 129/161 (80%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                       
Query: 194 gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
           ||||||||||||||| ||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 821 gtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 762

                                                                       
Query: 254 ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
            || | ||||| || |||    ||||||| || |||||  | |||||| |||||||| ||
Sbjct: 761 gtcgtcgacccaccatacagcaacaccggtgcaacgggggctttcctcaccggcgtcacc 702

                                                    
Query: 311 gcggccaacccctccatcactttccaccgtctacccaaggt 351
           |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 701 gcggccaacccggccatgacgttccaccgtctgccgaaggt 661



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 394 ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcct 443
           |||| ||||||||||||||||   ||| | |||||||||| |||||||||
Sbjct: 612 ggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcgcct 563
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 129/161 (80%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                            
Query: 194      gtctccatgatcgagctcgccaagctcttcgctgctcgcgggctatccgtcacggtcgtc 253
                ||||||||||||||| ||| |||| | ||||| || ||||| ||  ||||||| ||||||
Sbjct: 17064819 gtctccatgatcgagttcggcaaggtgttcgccgcccgcggcctcgccgtcaccgtcgtc 17064760

                                                                            
Query: 254      ctcatggacccgccgtacg---acaccggcgccacgggccccttcctcgccggcgtctcc 310
                 || | ||||| || |||    ||||||| || |||||  | |||||| |||||||| ||
Sbjct: 17064759 gtcgtcgacccaccatacagcaacaccggtgcaacgggggctttcctcaccggcgtcacc 17064700

                                                         
Query: 311      gcggccaacccctccatcactttccaccgtctacccaaggt 351
                |||||||||||  |||| || ||||||||||| || |||||
Sbjct: 17064699 gcggccaacccggccatgacgttccaccgtctgccgaaggt 17064659



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 394      ggtcgcccgcctctccaacccgcacctacacgacttcctcaccggcgcct 443
                |||| ||||||||||||||||   ||| | |||||||||| |||||||||
Sbjct: 17064610 ggtcacccgcctctccaaccccagcctccgcgacttcctcgccggcgcct 17064561



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 352      caagctcctcgactccgaccactccatga 380
                ||||||| || ||||||||||||||||||
Sbjct: 19858535 caagctcttctactccgaccactccatga 19858507
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>ref|NM_191572.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1416

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 297 tcgccggcgtctccgcggccaacccctccatcactttccacc 338
           |||||||| || ||||  |||||||||||||||| |||||||
Sbjct: 164 tcgccggcatcgccgcctccaacccctccatcaccttccacc 205



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 198 ccatgatcgagctcgccaagctcttc 223
           ||||| ||||||||||||||||||||
Sbjct: 65  ccatggtcgagctcgccaagctcttc 90
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 163     gctctactcgtccccgctcattgggc 188
               |||||||| |||||||||||||||||
Sbjct: 1458683 gctctacttgtccccgctcattgggc 1458658
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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1060H01
          Length = 157987

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 198    ccatgatcgagctcgccaagctcttc 223
              ||||| ||||||||||||||||||||
Sbjct: 149232 ccatggtcgagctcgccaagctcttc 149207



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 297    tcgccggcgtctccgcggccaacccctccatcactttccacc 338
              |||||||| || ||||  |||||||||||||||| |||||||
Sbjct: 149133 tcgccggcatcgccgcctccaacccctccatcaccttccacc 149092
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>dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114D10, full
            insert sequence
          Length = 3206

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 198  ccatgatcgagctcgccaagctcttc 223
            ||||| ||||||||||||||||||||
Sbjct: 1298 ccatggtcgagctcgccaagctcttc 1273



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 297  tcgccggcgtctccgcggccaacccctccatcactttccacc 338
            |||||||| || ||||  |||||||||||||||| |||||||
Sbjct: 1199 tcgccggcatcgccgcctccaacccctccatcaccttccacc 1158
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>dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J15, full
           insert sequence
          Length = 1674

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 297 tcgccggcgtctccgcggccaacccctccatcactttccacc 338
           |||||||| || ||||  |||||||||||||||| |||||||
Sbjct: 248 tcgccggcatcgccgcctccaacccctccatcaccttccacc 289



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 198 ccatgatcgagctcgccaagctcttc 223
           ||||| ||||||||||||||||||||
Sbjct: 149 ccatggtcgagctcgccaagctcttc 174
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>ref|XM_473042.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1002

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 352 caagctcctcgactccgaccactccatga 380
           ||||||| || ||||||||||||||||||
Sbjct: 594 caagctcttctactccgaccactccatga 622
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>ref|XM_753137.1| Ustilago maydis 521 hypothetical protein (UM02083.1) partial mRNA
          Length = 2613

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 120  tggacggcaccatgacgatca 140
            |||||||||||||||||||||
Sbjct: 2024 tggacggcaccatgacgatca 2044
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 110     gttgtcgacatggacggcacc 130
               |||||||||||||||||||||
Sbjct: 3451782 gttgtcgacatggacggcacc 3451762
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>gb|AC133337.5| Oryza sativa chromosome 3 BAC OSJNBa0023A13 genomic sequence, complete
             sequence
          Length = 72745

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 352   caagctcctcgactccgaccactccatga 380
             ||||||| || ||||||||||||||||||
Sbjct: 58507 caagctcttctactccgaccactccatga 58479
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>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7
          Length = 347365

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 479    gccgccatggacgtggccaag 499
              |||||||||||||||||||||
Sbjct: 344267 gccgccatggacgtggccaag 344247
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 261    acccgccgtacgacaccggcg 281
              |||||||||||||||||||||
Sbjct: 148996 acccgccgtacgacaccggcg 148976
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 114     tcgacatggacggcaccatga 134
               |||||||||||||||||||||
Sbjct: 2973215 tcgacatggacggcaccatga 2973235
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 352      caagctcctcgactccgaccactccatga 380
                ||||||| || ||||||||||||||||||
Sbjct: 24865937 caagctcttctactccgaccactccatga 24865965
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>gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genomic sequence, complete
             sequence
          Length = 137297

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 352   caagctcctcgactccgaccactccatga 380
             ||||||| || ||||||||||||||||||
Sbjct: 17796 caagctcttctactccgaccactccatga 17768
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>dbj|AK121024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049O11, full
           insert sequence
          Length = 1396

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 352 caagctcctcgactccgaccactccatga 380
           ||||||| || ||||||||||||||||||
Sbjct: 720 caagctcttctactccgaccactccatga 748
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>dbj|AK062706.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-B08, full
           insert sequence
          Length = 621

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 352 caagctcctcgactccgaccactccatga 380
           ||||||| || ||||||||||||||||||
Sbjct: 305 caagctcttctactccgaccactccatga 333
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 352    caagctcctcgactccgaccactccatga 380
              ||||||| || ||||||||||||||||||
Sbjct: 127653 caagctcttctactccgaccactccatga 127681
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      taccgatcaggatcaggaac 99
               ||||||||||||||||||||
Sbjct: 4086144 taccgatcaggatcaggaac 4086125
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>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
             complete sequence
          Length = 133352

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 188   catctcgtctccatgatcgagctcgccaagctcttc 223
             ||||||| | ||||| | ||||||||||||||||||
Sbjct: 14344 catctcgcccccatggtggagctcgccaagctcttc 14379
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>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 188   catctcgtctccatgatcgagctcgccaagctcttc 223
             ||||||| | ||||| | ||||||||||||||||||
Sbjct: 92654 catctcgcccccatggtggagctcgccaagctcttc 92689
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>ref|XM_369003.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00241.4) partial mRNA
          Length = 6306

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 tcgacatggacggcaccatg 133
           ||||||||||||||||||||
Sbjct: 950 tcgacatggacggcaccatg 969
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     catgatcgagctcgccaagc 218
               ||||||||||||||||||||
Sbjct: 1055851 catgatcgagctcgccaagc 1055832
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>emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100H13 on chromosome 20q11.2
             Contains the 3' end of the gene for a novel protein
             (KIAA1219), a novel gene, a HSPC037 pseudogene, the
             C20orf95 gene for a novel RhoGAP domain-containing protein
             and two CpG islands, complete sequence
          Length = 116792

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   gcgccgccatggacgtggcc 496
             ||||||||||||||||||||
Sbjct: 49975 gcgccgccatggacgtggcc 49956
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     ggctatccgtcacggtcgtc 253
               ||||||||||||||||||||
Sbjct: 2126879 ggctatccgtcacggtcgtc 2126898
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 188      catctcgtctccatgatcgagctcgccaagctcttc 223
                ||||||| | ||||| | ||||||||||||||||||
Sbjct: 25989583 catctcgcccccatggtggagctcgccaagctcttc 25989618
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>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S
              ribosomal protein S8 (Z214A02.25), and putative casein
              kinase I (Z214A02.27) genes, complete cds
          Length = 158797

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                              
Query: 293    ttcctcgccggcgtctccgcggccaacccctccatcactttccaccgt 340
              |||||| |||||||||||  ||||||||  |||||| | |||||||||
Sbjct: 152863 ttcctcaccggcgtctccttggccaacctgtccatctccttccaccgt 152910
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>gb|AC110740.15| Mus musculus chromosome 8, clone RP24-421B13, complete sequence
          Length = 213782

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     ccaactccctcgtgacattccaaa 40
              |||||||| |||||||||||||||
Sbjct: 115864 ccaactccatcgtgacattccaaa 115887
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>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence
          Length = 249504

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ccaccgtctacccaaggtca 353
              ||||||||||||||||||||
Sbjct: 133503 ccaccgtctacccaaggtca 133522
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>emb|AL663077.8| Mouse DNA sequence from clone RP23-22K4 on chromosome 2, complete
            sequence
          Length = 96128

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  cctccatcactttccaccgt 340
            ||||||||||||||||||||
Sbjct: 2089 cctccatcactttccaccgt 2070


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,991,722
Number of Sequences: 3902068
Number of extensions: 2991722
Number of successful extensions: 62035
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61427
Number of HSP's gapped (non-prelim): 604
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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