ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart35g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY246906.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) ge... 440 e-120
2gb|AY246907.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) mR... 432 e-118
3gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 242 9e-61
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 242 9e-61
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 242 9e-61
6dbj|AK065950.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 9e-61
7gb|DQ231252.1| Oryza sativa (japonica cultivar-group) SNARE prot... 234 2e-58
8ref|XM_464588.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.028
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
10dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
11gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 46 0.11
12emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 46 0.11
13gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 46 0.11
14gb|AY247216.1| Hordeum vulgare subsp. vulgare syntaxin-like prot... 44 0.44
15emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 44 0.44
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
17dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
18dbj|AK107080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
19gb|AY559173.1| Zea mays isolate mon00102 Ac insertion site 44 0.44
20ref|XM_483583.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
21ref|XM_851201.1| PREDICTED: Canis familiaris hypothetical protei... 42 1.7
22ref|XM_850425.1| PREDICTED: Canis familiaris similar to regulato... 42 1.7
23emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 42 1.7
24gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.7
25dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
27dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.7
28dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
29dbj|AK120995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
30dbj|AK120844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
31dbj|AK120813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
32gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.7
33gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
34emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
35dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.7
36ref|XM_512566.1| PREDICTED: Pan troglodytes similar to FLJ45744 ... 40 6.8
37ref|XM_475716.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
38gb|BT018423.1| Zea mays clone EL01N0361A06.d mRNA sequence 40 6.8
39gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 6.8
40ref|XM_368410.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 6.8
41gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.8
42gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.8
43gb|DQ356948.1| Crocodilepox virus, complete genome 40 6.8
44gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
45gb|CP000243.1| Escherichia coli UTI89, complete genome 40 6.8
46gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.8
47ref|XM_790259.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.8
48emb|AL121957.15|HSDJ67A8 Human DNA sequence from clone RP1-67A8 ... 40 6.8
49gb|AF192122.1| Fontinalis antipyretica isolate FA297 internal tr... 40 6.8
50emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chrom... 40 6.8
51emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.8
52emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.8
53emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 6.8
54emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chr... 40 6.8
55gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.8
56gb|AC008474.9| Homo sapiens chromosome 19 clone CTC-379B2, compl... 40 6.8
57dbj|AK127646.1| Homo sapiens cDNA FLJ45744 fis, clone KIDNE2017153 40 6.8
58dbj|AK124499.1| Homo sapiens cDNA FLJ42508 fis, clone BRACE2043665 40 6.8
59dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 6.8
60dbj|AK006506.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.8
61gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.8
62dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
63dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
64gb|AE009537.1| Brucella melitensis 16M chromosome I, section 94 ... 40 6.8
65gb|AE004925.1| Pseudomonas aeruginosa PAO1, section 486 of 529 o... 40 6.8
66gb|AC008736.6|AC008736 Homo sapiens chromosome 19 clone CTD-2538... 40 6.8
67dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.8
68gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 6.8
69dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.8
70dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
71dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
72ref|NM_207391.1| Homo sapiens RGS9 anchor protein (RGS9BP), mRNA 40 6.8
73dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
74gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.8
75emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 6.8
76dbj|AB242210.1| Pichia minuta var. minuta OmTDH1 gene for glycer... 40 6.8
77dbj|AB239708.1| Pichia minuta TDH gene for glyceraldehyde-3-phos... 40 6.8
78dbj|AB077269.1| Desulfovibrio vulgaris hmc, ORF2, ORF3 genes for... 40 6.8 
>gb|AY246906.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) gene, complete cds
          Length = 2346

 Score =  440 bits (222), Expect = e-120
 Identities = 228/230 (99%)
 Strand = Plus / Plus

                                                                        
Query: 5    gctccgctcgccacaatactagcggttaagtaactaaccccttcttcctcccttgtccac 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853  gctccgctcgccacaatactagcggttaagtaactaaccccttcttcctcccttgtccac 912

                                                                        
Query: 65   tccgcttctccccatccaagaaatagcgccaacagctccacccatcgaggagaatcaaga 124
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 913  tccgcttctccccatccaagaaacagcgccaacagctccacccatcgaggagaatcaaga 972

                                                                        
Query: 125  aaccgcgccggcgtggtgatcaaggacatccatcgatcgaacgaccgaccctgccttgcc 184
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 973  aaccgcgccggcgtggtgatcaaggacatccatcgatcgatcgaccgaccctgccttgcc 1032

                                                              
Query: 185  tgagtcaacccggcggcagccatgaacaacctcttctcgagctcgtggaa 234
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 tgagtcaacccggcggcagccatgaacaacctcttctcgagctcgtggaa 1082



 Score =  432 bits (218), Expect = e-118
 Identities = 218/218 (100%)
 Strand = Plus / Plus

                                                                        
Query: 285  tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 1192

                                                                        
Query: 345  acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 1252

                                                                        
Query: 405  acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 1312

                                                  
Query: 465  gcatggacgccgacgtggccgccgccatcaagaaggcc 502
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1313 gcatggacgccgacgtggccgccgccatcaagaaggcc 1350
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>gb|AY246907.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) mRNA, complete cds
          Length = 1293

 Score =  432 bits (218), Expect = e-118
 Identities = 218/218 (100%)
 Strand = Plus / Plus

                                                                       
Query: 285 tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 311

                                                                       
Query: 345 acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 371

                                                                       
Query: 405 acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 431

                                                 
Query: 465 gcatggacgccgacgtggccgccgccatcaagaaggcc 502
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gcatggacgccgacgtggccgccgccatcaagaaggcc 469



 Score =  383 bits (193), Expect = e-103
 Identities = 199/201 (99%)
 Strand = Plus / Plus

                                                                       
Query: 34  gtaactaaccccttcttcctcccttgtccactccgcttctccccatccaagaaatagcgc 93
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1   gtaactaaccccttcttcctcccttgtccactccgcttctccccatccaagaaacagcgc 60

                                                                       
Query: 94  caacagctccacccatcgaggagaatcaagaaaccgcgccggcgtggtgatcaaggacat 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caacagctccacccatcgaggagaatcaagaaaccgcgccggcgtggtgatcaaggacat 120

                                                                       
Query: 154 ccatcgatcgaacgaccgaccctgccttgcctgagtcaacccggcggcagccatgaacaa 213
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatcgatcgatcgaccgaccctgccttgcctgagtcaacccggcggcagccatgaacaa 180

                                
Query: 214 cctcttctcgagctcgtggaa 234
           |||||||||||||||||||||
Sbjct: 181 cctcttctcgagctcgtggaa 201
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score =  242 bits (122), Expect = 9e-61
 Identities = 194/218 (88%)
 Strand = Plus / Plus

                                                                         
Query: 285   tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 344
             |||||||| || |||||||||| || ||||||||||||||||| ||  | ||||||||||
Sbjct: 43144 tggagatggcgccgccgccgggggcggcggcgggggcgagccttgataggttcttcgagg 43203

                                                                         
Query: 345   acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 404
             |||||||||||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 43204 acgtggagtcgatcaaggacgagctccgcgacctggagcggatccagcggtcgctccacg 43263

                                                                         
Query: 405   acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 464
             ||| |||||||  |||||||||||| ||||||||| |||||||||||||||| ||  | |
Sbjct: 43264 acgccaacgaggggggcaagtcgctgcacgacgcggcggcggtgcgcgcgctgcgggcgc 43323

                                                   
Query: 465   gcatggacgccgacgtggccgccgccatcaagaaggcc 502
             |||||||||||||||| |||||||||||||||||||||
Sbjct: 43324 gcatggacgccgacgtcgccgccgccatcaagaaggcc 43361



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 200   gcagccatgaacaacctcttctcgagctcgtggaa 234
             |||||||||||||| |||||||| |||||||||||
Sbjct: 43056 gcagccatgaacaatctcttctctagctcgtggaa 43090
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  242 bits (122), Expect = 9e-61
 Identities = 194/218 (88%)
 Strand = Plus / Plus

                                                                            
Query: 285      tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 344
                |||||||| || |||||||||| || ||||||||||||||||| ||  | ||||||||||
Sbjct: 32391016 tggagatggcgccgccgccgggggcggcggcgggggcgagccttgataggttcttcgagg 32391075

                                                                            
Query: 345      acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 404
                |||||||||||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 32391076 acgtggagtcgatcaaggacgagctccgcgacctggagcggatccagcggtcgctccacg 32391135

                                                                            
Query: 405      acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 464
                ||| |||||||  |||||||||||| ||||||||| |||||||||||||||| ||  | |
Sbjct: 32391136 acgccaacgaggggggcaagtcgctgcacgacgcggcggcggtgcgcgcgctgcgggcgc 32391195

                                                      
Query: 465      gcatggacgccgacgtggccgccgccatcaagaaggcc 502
                |||||||||||||||| |||||||||||||||||||||
Sbjct: 32391196 gcatggacgccgacgtcgccgccgccatcaagaaggcc 32391233



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 200      gcagccatgaacaacctcttctcgagctcgtggaa 234
                |||||||||||||| |||||||| |||||||||||
Sbjct: 32390928 gcagccatgaacaatctcttctctagctcgtggaa 32390962
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  242 bits (122), Expect = 9e-61
 Identities = 194/218 (88%)
 Strand = Plus / Plus

                                                                            
Query: 285      tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 344
                |||||||| || |||||||||| || ||||||||||||||||| ||  | ||||||||||
Sbjct: 32481526 tggagatggcgccgccgccgggggcggcggcgggggcgagccttgataggttcttcgagg 32481585

                                                                            
Query: 345      acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 404
                |||||||||||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 32481586 acgtggagtcgatcaaggacgagctccgcgacctggagcggatccagcggtcgctccacg 32481645

                                                                            
Query: 405      acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 464
                ||| |||||||  |||||||||||| ||||||||| |||||||||||||||| ||  | |
Sbjct: 32481646 acgccaacgaggggggcaagtcgctgcacgacgcggcggcggtgcgcgcgctgcgggcgc 32481705

                                                      
Query: 465      gcatggacgccgacgtggccgccgccatcaagaaggcc 502
                |||||||||||||||| |||||||||||||||||||||
Sbjct: 32481706 gcatggacgccgacgtcgccgccgccatcaagaaggcc 32481743



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 200      gcagccatgaacaacctcttctcgagctcgtggaa 234
                |||||||||||||| |||||||| |||||||||||
Sbjct: 32481438 gcagccatgaacaatctcttctctagctcgtggaa 32481472
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>dbj|AK065950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049M07, full
           insert sequence
          Length = 1206

 Score =  242 bits (122), Expect = 9e-61
 Identities = 194/218 (88%)
 Strand = Plus / Plus

                                                                       
Query: 285 tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 344
           |||||||| || |||||||||| || ||||||||||||||||| ||  | ||||||||||
Sbjct: 131 tggagatggcgccgccgccgggggcggcggcgggggcgagccttgataggttcttcgagg 190

                                                                       
Query: 345 acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 404
           |||||||||||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 191 acgtggagtcgatcaaggacgagctccgcgacctggagcggatccagcggtcgctccacg 250

                                                                       
Query: 405 acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 464
           ||| |||||||  |||||||||||| ||||||||| |||||||||||||||| ||  | |
Sbjct: 251 acgccaacgaggggggcaagtcgctgcacgacgcggcggcggtgcgcgcgctgcgggcgc 310

                                                 
Query: 465 gcatggacgccgacgtggccgccgccatcaagaaggcc 502
           |||||||||||||||| |||||||||||||||||||||
Sbjct: 311 gcatggacgccgacgtcgccgccgccatcaagaaggcc 348



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 200 gcagccatgaacaacctcttctcgagctcgtggaa 234
           |||||||||||||| |||||||| |||||||||||
Sbjct: 43  gcagccatgaacaatctcttctctagctcgtggaa 77
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>gb|DQ231252.1| Oryza sativa (japonica cultivar-group) SNARE protein (SYP121) mRNA,
           complete cds
          Length = 1015

 Score =  234 bits (118), Expect = 2e-58
 Identities = 193/218 (88%)
 Strand = Plus / Plus

                                                                       
Query: 285 tggagatgacggcgccgccgggcgccgcggcgggggcgagcctggaccgcttcttcgagg 344
           |||||||| || |||||||||| || ||||||||||||||||| ||  | ||||||||||
Sbjct: 89  tggagatggcgccgccgccgggggcggcggcgggggcgagccttgataggttcttcgagg 148

                                                                       
Query: 345 acgtggagtcgatcaaggacgacctgcgggagctggagcggatccagcgctccctccacg 404
           |||||||||||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 149 acgtggagtcgatcaaggacgagctccgcgacctggagcggatccagcggtcgctccacg 208

                                                                       
Query: 405 acggcaacgagtcgggcaagtcgctccacgacgcgtcggcggtgcgcgcgctccgctccc 464
           ||| |||||||  |||||||||||| ||||||||| |||||||||||||||| ||  | |
Sbjct: 209 acgccaacgaggggggcaagtcgctgcacgacgcggcggcggtgcgcgcgctgcgggcgc 268

                                                 
Query: 465 gcatggacgccgacgtggccgccgccatcaagaaggcc 502
           |||||||||||||||| ||| |||||||||||||||||
Sbjct: 269 gcatggacgccgacgtcgccaccgccatcaagaaggcc 306



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 202 agccatgaacaacctcttctcgagctcgtggaa 234
           |||||||||||| |||||||| |||||||||||
Sbjct: 3   agccatgaacaatctcttctctagctcgtggaa 35
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>ref|XM_464588.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 936

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 453 cgctccgctcccgcatggacgccgacgt 480
           |||||||| |||||||||||||||||||
Sbjct: 245 cgctccgcgcccgcatggacgccgacgt 272
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 453     cgctccgctcccgcatggacgccgacgt 480
               |||||||| |||||||||||||||||||
Sbjct: 6158616 cgctccgcgcccgcatggacgccgacgt 6158589



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 448     gcgcgcgctccgctcccgcatgga 471
               |||||||||| |||||||||||||
Sbjct: 4526880 gcgcgcgctctgctcccgcatgga 4526857
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>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1006_A02
          Length = 175153

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 453    cgctccgctcccgcatggacgccgacgt 480
              |||||||| |||||||||||||||||||
Sbjct: 124098 cgctccgcgcccgcatggacgccgacgt 124071
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 351     agtcgatcaaggacgacctgcgg 373
               |||||||||||||||||||||||
Sbjct: 2176658 agtcgatcaaggacgacctgcgg 2176680
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 351    agtcgatcaaggacgacctgcgg 373
              |||||||||||||||||||||||
Sbjct: 831880 agtcgatcaaggacgacctgcgg 831902
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 303     cgggcgccgcggcgggggcgagc 325
               |||||||||||||||||||||||
Sbjct: 1008504 cgggcgccgcggcgggggcgagc 1008526



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 296     gcgccgccgggcgccgcggc 315
               ||||||||||||||||||||
Sbjct: 2776960 gcgccgccgggcgccgcggc 2776941



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 435     acgcgtcggcggtgcgcgcg 454
               ||||||||||||||||||||
Sbjct: 2519099 acgcgtcggcggtgcgcgcg 2519080
to top
>gb|AY247216.1| Hordeum vulgare subsp. vulgare syntaxin-like protein 3 gene,
           partial cds
          Length = 553

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 ctccgctcccgcatggacgccgacgt 480
           ||||||||||||||||||| ||||||
Sbjct: 212 ctccgctcccgcatggacggcgacgt 237
to top
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 473    gccgacgtggccgccgccatca 494
              ||||||||||||||||||||||
Sbjct: 133873 gccgacgtggccgccgccatca 133894
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 455      ctccgctcccgcatggacgccgacgt 480
                ||||||||||||||||||| ||||||
Sbjct: 22801813 ctccgctcccgcatggacggcgacgt 22801838



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 325      cctggaccgcttcttcgaggacgtggag 352
                ||||||| | ||||||||||||||||||
Sbjct: 22801683 cctggacaggttcttcgaggacgtggag 22801710
to top
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0633E08
          Length = 136471

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 455   ctccgctcccgcatggacgccgacgt 480
             ||||||||||||||||||| ||||||
Sbjct: 88764 ctccgctcccgcatggacggcgacgt 88789



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 325   cctggaccgcttcttcgaggacgtggag 352
             ||||||| | ||||||||||||||||||
Sbjct: 88634 cctggacaggttcttcgaggacgtggag 88661
to top
>dbj|AK107080.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F10, full
           insert sequence
          Length = 1131

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 ctccgctcccgcatggacgccgacgt 480
           ||||||||||||||||||| ||||||
Sbjct: 337 ctccgctcccgcatggacggcgacgt 362



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 325 cctggaccgcttcttcgaggacgtggag 352
           ||||||| | ||||||||||||||||||
Sbjct: 207 cctggacaggttcttcgaggacgtggag 234
to top
>gb|AY559173.1| Zea mays isolate mon00102 Ac insertion site
          Length = 687

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 297 cgccgccgggcgccgcggcgggggcg 322
           ||||||||||||||||||||| ||||
Sbjct: 128 cgccgccgggcgccgcggcggcggcg 153
to top
>ref|XM_483583.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2202

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 470  gacgccgacgtggccgccgcc 490
            |||||||||||||||||||||
Sbjct: 1885 gacgccgacgtggccgccgcc 1905
to top
>ref|XM_851201.1| PREDICTED: Canis familiaris hypothetical protein LOC606937
           (LOC606937), mRNA
          Length = 2532

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 383 cggatccagcgctccctccac 403
           |||||||||||||||||||||
Sbjct: 863 cggatccagcgctccctccac 883
to top
>ref|XM_850425.1| PREDICTED: Canis familiaris similar to regulator of G protein
           signaling 9-binding protein (LOC612699), mRNA
          Length = 1005

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 361 ggacgacctgcgggagctggagcgg 385
           |||||||||||| ||||||||||||
Sbjct: 447 ggacgacctgcgcgagctggagcgg 471
to top
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 296    gcgccgccgggcgccgcggcg 316
              |||||||||||||||||||||
Sbjct: 203482 gcgccgccgggcgccgcggcg 203462
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 472     cgccgacgtggccgccgccat 492
               |||||||||||||||||||||
Sbjct: 1387603 cgccgacgtggccgccgccat 1387623
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 297     cgccgccgggcgccgcggcgg 317
               |||||||||||||||||||||
Sbjct: 3032697 cgccgccgggcgccgcggcgg 3032717
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 470      gacgccgacgtggccgccgcc 490
                |||||||||||||||||||||
Sbjct: 27096681 gacgccgacgtggccgccgcc 27096661
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 306     gcgccgcggcgggggcgagcc 326
               |||||||||||||||||||||
Sbjct: 5541512 gcgccgcggcgggggcgagcc 5541492
to top
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 470   gacgccgacgtggccgccgcc 490
             |||||||||||||||||||||
Sbjct: 67768 gacgccgacgtggccgccgcc 67748
to top
>dbj|AK120995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043P11, full
            insert sequence
          Length = 2885

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 470  gacgccgacgtggccgccgcc 490
            |||||||||||||||||||||
Sbjct: 2277 gacgccgacgtggccgccgcc 2297
to top
>dbj|AK120844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M14, full
           insert sequence
          Length = 2489

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 297 cgccgccgggcgccgcggcgg 317
           |||||||||||||||||||||
Sbjct: 469 cgccgccgggcgccgcggcgg 449
to top
>dbj|AK120813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014M03, full
           insert sequence
          Length = 2643

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 297 cgccgccgggcgccgcggcgg 317
           |||||||||||||||||||||
Sbjct: 469 cgccgccgggcgccgcggcgg 449
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 132     ccggcgtggtgatcaaggaca 152
               |||||||||||||||||||||
Sbjct: 4477042 ccggcgtggtgatcaaggaca 4477062
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 297     cgccgccgggcgccgcggcgg 317
               |||||||||||||||||||||
Sbjct: 3032642 cgccgccgggcgccgcggcgg 3032662
to top
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 297    cgccgccgggcgccgcggcgg 317
              |||||||||||||||||||||
Sbjct: 122146 cgccgccgggcgccgcggcgg 122126
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 367     cctgcgggagctggagcggat 387
               |||||||||||||||||||||
Sbjct: 1897971 cctgcgggagctggagcggat 1897951
to top
>ref|XM_512566.1| PREDICTED: Pan troglodytes similar to FLJ45744 protein (LOC455923),
           mRNA
          Length = 3168

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 365 gacctgcgggagctggagcg 384
           ||||||||||||||||||||
Sbjct: 436 gacctgcgggagctggagcg 455
to top
>ref|XM_475716.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2700

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 301 gccgggcgccgcggcggggg 320
           ||||||||||||||||||||
Sbjct: 267 gccgggcgccgcggcggggg 286
to top
>gb|BT018423.1| Zea mays clone EL01N0361A06.d mRNA sequence
          Length = 1435

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 360 aggacgacctgcgggagctggagc 383
           ||||||| ||||||||||||||||
Sbjct: 134 aggacgatctgcgggagctggagc 111
to top
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    tggagatgacggcgccgccg 304
              ||||||||||||||||||||
Sbjct: 984983 tggagatgacggcgccgccg 984964
to top
>ref|XM_368410.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00834.4) partial mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 294 cggcgccgccgggcgccgcggcgggggcgagc 325
           ||||||||||| ||||||| ||| ||||||||
Sbjct: 348 cggcgccgccgagcgccgccgcgagggcgagc 379
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 304     gggcgccgcggcgggggcga 323
               ||||||||||||||||||||
Sbjct: 2111805 gggcgccgcggcgggggcga 2111786
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     acgcgtcggcggtgcgcgcg 454
               ||||||||||||||||||||
Sbjct: 2303223 acgcgtcggcggtgcgcgcg 2303242
to top
>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 476    gacgtggccgccgccatcaagaag 499
              ||||||||||||||| ||||||||
Sbjct: 165693 gacgtggccgccgccgtcaagaag 165716
to top
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
             complete sequence
          Length = 143073

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   gccgggcgccgcggcggggg 320
             ||||||||||||||||||||
Sbjct: 82084 gccgggcgccgcggcggggg 82103
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 83      agaaatagcgccaacagctc 102
               ||||||||||||||||||||
Sbjct: 4070993 agaaatagcgccaacagctc 4071012
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 125     aaccgcgccggcgtggtgat 144
               ||||||||||||||||||||
Sbjct: 3078670 aaccgcgccggcgtggtgat 3078689
to top
>ref|XM_790259.1| PREDICTED: Strongylocentrotus purpuratus similar to dynein light
           chain-2 (LOC590662), mRNA
          Length = 501

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 476 gacgtggccgccgccatcaagaag 499
           ||||| ||||||||||||||||||
Sbjct: 340 gacgtcgccgccgccatcaagaag 363
to top
>emb|AL121957.15|HSDJ67A8 Human DNA sequence from clone RP1-67A8 on chromosome 6q16.2-21 Contains
             the 5' end of a novel gene, a novel gene, the 5' end of
             the C6orf210 gene for chromosome 6 open reading frame 210
             and two CpG islands, complete sequence
          Length = 154918

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    cccttcttcctcccttgtcc 62
             ||||||||||||||||||||
Sbjct: 72835 cccttcttcctcccttgtcc 72854
to top
>gb|AF192122.1| Fontinalis antipyretica isolate FA297 internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           26S ribosomal RNA gene, partial sequence
          Length = 899

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 catcgatcgaacgaccgacc 174
           ||||||||||||||||||||
Sbjct: 118 catcgatcgaacgaccgacc 137
to top
>emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chromosome 11, complete
              sequence
          Length = 194230

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    gagctggagcggatccagcg 393
              ||||||||||||||||||||
Sbjct: 178393 gagctggagcggatccagcg 178374
to top
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    gacgccgacgtggccgccgc 489
              ||||||||||||||||||||
Sbjct: 119700 gacgccgacgtggccgccgc 119719
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    acgcgtcggcggtgcgcgcg 454
              ||||||||||||||||||||
Sbjct: 464685 acgcgtcggcggtgcgcgcg 464704
to top
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    gatgacggcgccgccgggcg 308
              ||||||||||||||||||||
Sbjct: 213363 gatgacggcgccgccgggcg 213344
to top
>emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chromosome 11 Contains the
             Gp1ba gene for glycoprotein 1b alpha polypeptide, the
             Slc25a11 gene for solute carrier family 25 (mitochondrial
             carrier; oxoglutarate carrier) member 11, the gene for a
             novel PA domain and C3HC4 type zinc finger (RING finger)
             containing protein, the Pfn1 gene for profilin 1, five
             novel genes, the Eno3 gene for muscle enolase 3 beta, the
             Spag7 gene for sperm associated antigen 7, the Kif1c gene
             for kinesin family member 1C, a ribosomal protein 37A
             (Rpl37a) pseudogene, the gene for a novel zinc finger
             protein and six CpG islands, complete sequence
          Length = 207086

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gagctggagcggatccagcg 393
             ||||||||||||||||||||
Sbjct: 22806 gagctggagcggatccagcg 22787
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 364    cgacctgcgggagctggagcggatccag 391
              ||||||| | ||||||||||||||||||
Sbjct: 883302 cgacctgtgcgagctggagcggatccag 883275
to top
>gb|AC008474.9| Homo sapiens chromosome 19 clone CTC-379B2, complete sequence
          Length = 186115

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    gacctgcgggagctggagcg 384
              ||||||||||||||||||||
Sbjct: 181949 gacctgcgggagctggagcg 181968
to top
>dbj|AK127646.1| Homo sapiens cDNA FLJ45744 fis, clone KIDNE2017153
          Length = 2327

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 365 gacctgcgggagctggagcg 384
           ||||||||||||||||||||
Sbjct: 850 gacctgcgggagctggagcg 869
to top
>dbj|AK124499.1| Homo sapiens cDNA FLJ42508 fis, clone BRACE2043665
          Length = 3122

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  gacctgcgggagctggagcg 384
            ||||||||||||||||||||
Sbjct: 1293 gacctgcgggagctggagcg 1312
to top
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    tgcgggagctggagcggatc 388
              ||||||||||||||||||||
Sbjct: 607028 tgcgggagctggagcggatc 607009
to top
>dbj|AK006506.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700029K24 product:unclassifiable, full
           insert sequence
          Length = 477

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 374 gagctggagcggatccagcg 393
           ||||||||||||||||||||
Sbjct: 280 gagctggagcggatccagcg 261
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 435     acgcgtcggcggtgcgcgcg 454
               ||||||||||||||||||||
Sbjct: 1523909 acgcgtcggcggtgcgcgcg 1523890
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      cggcgccgccgggcgccgcg 313
                ||||||||||||||||||||
Sbjct: 13705176 cggcgccgccgggcgccgcg 13705195
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 301      gccgggcgccgcggcggggg 320
                ||||||||||||||||||||
Sbjct: 25441723 gccgggcgccgcggcggggg 25441742
to top
>gb|AE009537.1| Brucella melitensis 16M chromosome I, section 94 of 195 of the
           complete sequence
          Length = 10818

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tggagatgacggcgccgccg 304
           ||||||||||||||||||||
Sbjct: 891 tggagatgacggcgccgccg 910
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>gb|AE004925.1| Pseudomonas aeruginosa PAO1, section 486 of 529 of the complete
            genome
          Length = 10689

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  cgccgccgggcgccgcggcg 316
            ||||||||||||||||||||
Sbjct: 6013 cgccgccgggcgccgcggcg 5994
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>gb|AC008736.6|AC008736 Homo sapiens chromosome 19 clone CTD-2538C1, complete sequence
          Length = 191925

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    gacctgcgggagctggagcg 384
              ||||||||||||||||||||
Sbjct: 128168 gacctgcgggagctggagcg 128149
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     gacggcgccgccgggcgccg 311
               ||||||||||||||||||||
Sbjct: 1243364 gacggcgccgccgggcgccg 1243383
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 285     tggagatgacggcgccgccg 304
               ||||||||||||||||||||
Sbjct: 1003984 tggagatgacggcgccgccg 1003965
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 468     tggacgccgacgtggccgccgcca 491
               |||||||||||| |||||||||||
Sbjct: 2373501 tggacgccgacgcggccgccgcca 2373478
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>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    cggcgccgccgggcgccgcg 313
              ||||||||||||||||||||
Sbjct: 103290 cggcgccgccgggcgccgcg 103309
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>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1297_C09
          Length = 163378

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 448   gcgcgcgctccgctcccgcatgga 471
             |||||||||| |||||||||||||
Sbjct: 62259 gcgcgcgctctgctcccgcatgga 62236
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>ref|NM_207391.1| Homo sapiens RGS9 anchor protein (RGS9BP), mRNA
          Length = 3122

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  gacctgcgggagctggagcg 384
            ||||||||||||||||||||
Sbjct: 1293 gacctgcgggagctggagcg 1312
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>dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H22, full
           insert sequence
          Length = 3498

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 301 gccgggcgccgcggcggggg 320
           ||||||||||||||||||||
Sbjct: 442 gccgggcgccgcggcggggg 461
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 297     cgccgccgggcgccgcggcg 316
               ||||||||||||||||||||
Sbjct: 1851067 cgccgccgggcgccgcggcg 1851086
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 285     tggagatgacggcgccgccg 304
               ||||||||||||||||||||
Sbjct: 1001104 tggagatgacggcgccgccg 1001085
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>dbj|AB242210.1| Pichia minuta var. minuta OmTDH1 gene for glyceraldehyde-3-phosphate
            dehydrogenase, complete cds
          Length = 6140

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 483  ccgccgccatcaagaaggcc 502
            ||||||||||||||||||||
Sbjct: 2264 ccgccgccatcaagaaggcc 2283
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>dbj|AB239708.1| Pichia minuta TDH gene for glyceraldehyde-3-phosphate
           dehydrogenase, complete cds
          Length = 1011

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 483 ccgccgccatcaagaaggcc 502
           ||||||||||||||||||||
Sbjct: 773 ccgccgccatcaagaaggcc 792
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>dbj|AB077269.1| Desulfovibrio vulgaris hmc, ORF2, ORF3 genes for
            high-molecular-weight cytochrome c, hypothetical protein,
            complete and partial cds
          Length = 5067

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 472  cgccgacgtggccgccgcca 491
            ||||||||||||||||||||
Sbjct: 2925 cgccgacgtggccgccgcca 2944


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,991,091
Number of Sequences: 3902068
Number of extensions: 2991091
Number of successful extensions: 71496
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68540
Number of HSP's gapped (non-prelim): 2951
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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