ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart35g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469638.1| Oryza sativa (japonica cultivar-group), mRNA 406 e-110
2dbj|AB110184.1| Oryza sativa (japonica cultivar-group) mRNA for ... 406 e-110
3dbj|AK061742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110
4dbj|AK068510.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103
5gb|AY104325.1| Zea mays PCO141653 mRNA sequence 337 2e-89
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 168 1e-38
7gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 168 1e-38
8gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom... 168 1e-38
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
10ref|NM_121124.3| Arabidopsis thaliana unknown protein AT5G10860 ... 157 5e-35
11gb|AF361845.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, c... 157 5e-35
12gb|AY066046.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, c... 157 5e-35
13emb|BX832342.1|CNS0A0VO Arabidopsis thaliana Full-length cDNA Co... 157 5e-35
14emb|BX831340.1|CNS0A0OX Arabidopsis thaliana Full-length cDNA Co... 157 5e-35
15emb|BX833110.1|CNS0A0JJ Arabidopsis thaliana Full-length cDNA Co... 157 5e-35
16gb|AY389652.1| Hyacinthus orientalis CBS1 mRNA, partial cds 155 2e-34
17emb|BX832554.1|CNS0A15P Arabidopsis thaliana Full-length cDNA Co... 143 7e-31
18emb|BX831549.1|CNS0A0VJ Arabidopsis thaliana Full-length cDNA Co... 143 7e-31
19gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence 141 3e-30
20gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh... 131 3e-27
21gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, co... 131 3e-27
22gb|AY681118.1| Citrus limon unknown mRNA 125 2e-25
23gb|AF459408.1| Narcissus pseudonarcissus DAFSAG13 senescence-ass... 113 6e-22
24emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, B... 64 5e-07
25emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytos... 62 2e-06
26gb|AC102014.6| Mus musculus chromosome 1, clone RP24-553D14, com... 44 0.48
27gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.9
28emb|BX043922.1|CNS0961Y Single read from an extremity of a full-... 42 1.9
29emb|BX041367.1|CNS0942Z Single read from an extremity of a full-... 42 1.9
30emb|BX039334.1|CNS092II Single read from an extremity of a full-... 42 1.9
31emb|BX039333.1|CNS092IH Single read from an extremity of a full-... 42 1.9
32emb|BX023232.1|CNS08Q38 Single read from an extremity of a full-... 42 1.9
33emb|BX023231.1|CNS08Q37 Single read from an extremity of a full-... 42 1.9
34emb|BX012270.1|CNS08HMQ Single read from an extremity of a full-... 42 1.9
35ref|XM_309432.2| Anopheles gambiae str. PEST ENSANGP00000011203 ... 42 1.9
36ref|NM_112224.2| Arabidopsis thaliana RNA binding / ribonuclease... 40 7.6
37emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chr... 40 7.6
38emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chro... 40 7.6
39emb|AL157413.18| Human DNA sequence from clone RP11-526K17 on ch... 40 7.6
40gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, com... 40 7.6
41gb|AY072533.1| Arabidopsis thaliana unknown protein (At3g13730; ... 40 7.6
42gb|AF386979.1|AF386979 Arabidopsis thaliana Unknown protein (MMM... 40 7.6
43gb|AC087528.15| Homo sapiens chromosome 15, clone RP11-497M17, c... 40 7.6
44emb|BX826102.1|CNS0A7K6 Arabidopsis thaliana Full-length cDNA Co... 40 7.6
45emb|BX825866.1|CNS0A7IM Arabidopsis thaliana Full-length cDNA Co... 40 7.6
46gb|AY084429.1| Arabidopsis thaliana clone 108144 mRNA, complete ... 40 7.6
47dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.6
48dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 7.6
49gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, compl... 40 7.6

>ref|XM_469638.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1169

 Score =  406 bits (205), Expect = e-110
 Identities = 319/357 (89%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
           |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 184 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 243

                                                                       
Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
           ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 244 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 303

                                                                       
Query: 322 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381
           |||||   ||||||||||||||||||||| ||||| || ||||| || |||||| |||||
Sbjct: 304 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 363

                                                                       
Query: 382 gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441
           ||||||||||||||  | ||||||||||||||||| || || || ||||||||||| |||
Sbjct: 364 gttgttaaacctggacaggataaatcaattgctggtattgttactgagagagattacctc 423

                                                                       
Query: 442 cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501
            |||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 424 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 483

                                                                    
Query: 502 gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
           ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 484 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 540



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                       
Query: 93  aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
           |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 75  aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 134

                         
Query: 153 ccaacacatcagtg 166
            | |||||||||||
Sbjct: 135 gcgacacatcagtg 148



to top

>dbj|AB110184.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 14FPB077
          Length = 1057

 Score =  406 bits (205), Expect = e-110
 Identities = 319/357 (89%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
           |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 135 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 194

                                                                       
Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
           ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 195 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 254

                                                                       
Query: 322 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381
           |||||   ||||||||||||||||||||| ||||| || ||||| || |||||| |||||
Sbjct: 255 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 314

                                                                       
Query: 382 gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441
           ||||||||||||||  | ||||||||||||||||| || || || ||||||||||| |||
Sbjct: 315 gttgttaaacctggacaggataaatcaattgctggtattgttactgagagagattacctc 374

                                                                       
Query: 442 cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501
            |||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 375 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 434

                                                                    
Query: 502 gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
           ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 435 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 491



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                       
Query: 93  aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
           |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 26  aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 85

                         
Query: 153 ccaacacatcagtg 166
            | |||||||||||
Sbjct: 86  gcgacacatcagtg 99



to top

>dbj|AK061742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F01, full
           insert sequence
          Length = 1067

 Score =  406 bits (205), Expect = e-110
 Identities = 319/357 (89%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
           |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 255 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 314

                                                                       
Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
           ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 315 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 374

                                                                       
Query: 322 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381
           |||||   ||||||||||||||||||||| ||||| || ||||| || |||||| |||||
Sbjct: 375 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 434

                                                                       
Query: 382 gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441
           ||||||||||||||  | ||||||||||||||||| || || || ||||||||||| |||
Sbjct: 435 gttgttaaacctggacaggataaatcaattgctggtattgttactgagagagattacctc 494

                                                                       
Query: 442 cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501
            |||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 495 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 554

                                                                    
Query: 502 gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
           ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 555 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 611



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                       
Query: 93  aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
           |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 146 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 205

                         
Query: 153 ccaacacatcagtg 166
            | |||||||||||
Sbjct: 206 gcgacacatcagtg 219



to top

>dbj|AK068510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152K18, full
            insert sequence
          Length = 3163

 Score =  385 bits (194), Expect = e-103
 Identities = 317/357 (88%), Gaps = 2/357 (0%)
 Strand = Plus / Plus

                                                                        
Query: 202  cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
            |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 2245 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 2304

                                                                        
Query: 262  gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
            ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 2305 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 2364

                                                                        
Query: 322  gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381
            |||||   ||||||||||||||||||||| ||||| || ||||| || |||||| |||||
Sbjct: 2365 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 2424

                                                                        
Query: 382  gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441
            ||||||||||||||  | ||||||||||||||||| || || || ||||||  ||| |||
Sbjct: 2425 gttgttaaacctggacaggataaatcaattgctggtattgttactgagaga--ttacctc 2482

                                                                        
Query: 442  cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501
             |||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 2483 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 2542

                                                                     
Query: 502  gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
            ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2543 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 2599



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                        
Query: 93   aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
            |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 2136 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 2195

                          
Query: 153  ccaacacatcagtg 166
             | |||||||||||
Sbjct: 2196 gcgacacatcagtg 2209



to top

>gb|AY104325.1| Zea mays PCO141653 mRNA sequence
          Length = 1167

 Score =  337 bits (170), Expect = 2e-89
 Identities = 308/354 (87%)
 Strand = Plus / Plus

                                                                       
Query: 205 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 264
           ||||||||||| ||||||||||   |||||||  | |||||||| |    |||||| |||
Sbjct: 300 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 359

                                                                       
Query: 265 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 324
           ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 360 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 419

                                                                       
Query: 325 gatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggtt 384
           ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 420 gatagcgtctatgacgctgtcaaatctatgactcagcacaacgtgggagctttggtggtt 479

                                                                       
Query: 385 gttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctccgg 444
           || ||||||||  |  |||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 480 gtcaaacctggacagaataaatcaatcgctggcattgtcactgagagagattatctccgg 539

                                                                       
Query: 445 aaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaa 504
           |||||||| ||||||||  | || ||||||||||| || ||||| || ||||||||||||
Sbjct: 540 aaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcgacatcatgactgaa 599

                                                                 
Query: 505 gagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
           |||||||| |||||||| ||||| || |||||||  |||||||| |||||||||
Sbjct: 600 gagaacaaactgatcacagtgaatcccgacaccaaggtcctgcaggcaatgcag 653



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  168 bits (85), Expect = 1e-38
 Identities = 133/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 202      cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
                |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 29915824 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 29915765

                                                                            
Query: 262      gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
                ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 29915764 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 29915705

                                             
Query: 322      gatgatagtgtctatgatgctgtcaaatc 350
                |||||   |||||||||||||||||||||
Sbjct: 29915704 gatgactctgtctatgatgctgtcaaatc 29915676



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 432      agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
                |||||| ||| |||||||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 29915146 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 29915087

                                
Query: 492      tatcatgactgaagag 507
                 |||||||||||||||
Sbjct: 29915086 catcatgactgaagag 29915071



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                     
Query: 506      agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
                ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 29914823 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 29914771



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                            
Query: 93       aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
                |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 29915933 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 29915874

                              
Query: 153      ccaacacatcagtg 166
                 | |||||||||||
Sbjct: 29915873 gcgacacatcagtg 29915860



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 351      gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410
                |||||| || ||||| || |||||| |||||||||||||||||||  | |||||||||||
Sbjct: 29915599 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 29915540

                                       
Query: 411      tgctggcatcgtcacagagagag 433
                |||||| || || || |||||||
Sbjct: 29915539 tgctggtattgttactgagagag 29915517



to top

>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score =  168 bits (85), Expect = 1e-38
 Identities = 133/149 (89%)
 Strand = Plus / Plus

                                                                         
Query: 202   cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
             |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 94782 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 94841

                                                                         
Query: 262   gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
             ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 94842 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 94901

                                          
Query: 322   gatgatagtgtctatgatgctgtcaaatc 350
             |||||   |||||||||||||||||||||
Sbjct: 94902 gatgactctgtctatgatgctgtcaaatc 94930



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                         
Query: 432   agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
             |||||| ||| |||||||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 95460 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 95519

                             
Query: 492   tatcatgactgaagag 507
              |||||||||||||||
Sbjct: 95520 catcatgactgaagag 95535



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                  
Query: 506   agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
             ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 95783 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 95835



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                         
Query: 93    aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
             |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 94673 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 94732

                           
Query: 153   ccaacacatcagtg 166
              | |||||||||||
Sbjct: 94733 gcgacacatcagtg 94746



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                         
Query: 351   gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410
             |||||| || ||||| || |||||| |||||||||||||||||||  | |||||||||||
Sbjct: 95007 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 95066

                                    
Query: 411   tgctggcatcgtcacagagagag 433
             |||||| || || || |||||||
Sbjct: 95067 tgctggtattgttactgagagag 95089



to top

>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
             sequence
          Length = 139946

 Score =  168 bits (85), Expect = 1e-38
 Identities = 133/149 (89%)
 Strand = Plus / Minus

                                                                         
Query: 202   cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
             |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 81765 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 81706

                                                                         
Query: 262   gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
             ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 81705 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 81646

                                          
Query: 322   gatgatagtgtctatgatgctgtcaaatc 350
             |||||   |||||||||||||||||||||
Sbjct: 81645 gatgactctgtctatgatgctgtcaaatc 81617



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                         
Query: 432   agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
             |||||| ||| |||||||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 81087 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 81028

                             
Query: 492   tatcatgactgaagag 507
              |||||||||||||||
Sbjct: 81027 catcatgactgaagag 81012



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                  
Query: 506   agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
             ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 80764 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 80712



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                         
Query: 93    aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
             |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 81874 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 81815

                           
Query: 153   ccaacacatcagtg 166
              | |||||||||||
Sbjct: 81814 gcgacacatcagtg 81801



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 351   gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410
             |||||| || ||||| || |||||| |||||||||||||||||||  | |||||||||||
Sbjct: 81540 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 81481

                                    
Query: 411   tgctggcatcgtcacagagagag 433
             |||||| || || || |||||||
Sbjct: 81480 tgctggtattgttactgagagag 81458



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  168 bits (85), Expect = 1e-38
 Identities = 133/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 202      cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261
                |||| ||||||||| ||||||||||||||||||||||| ||||||||||    |||||| 
Sbjct: 30007246 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 30007187

                                                                            
Query: 262      gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321
                ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || 
Sbjct: 30007186 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 30007127

                                             
Query: 322      gatgatagtgtctatgatgctgtcaaatc 350
                |||||   |||||||||||||||||||||
Sbjct: 30007126 gatgactctgtctatgatgctgtcaaatc 30007098



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 432      agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
                |||||| ||| |||||||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 30006568 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 30006509

                                
Query: 492      tatcatgactgaagag 507
                 |||||||||||||||
Sbjct: 30006508 catcatgactgaagag 30006493



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                     
Query: 506      agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
                ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 30006245 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 30006193



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                            
Query: 93       aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152
                |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| ||
Sbjct: 30007355 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 30007296

                              
Query: 153      ccaacacatcagtg 166
                 | |||||||||||
Sbjct: 30007295 gcgacacatcagtg 30007282



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 351      gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410
                |||||| || ||||| || |||||| |||||||||||||||||||  | |||||||||||
Sbjct: 30007021 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 30006962

                                       
Query: 411      tgctggcatcgtcacagagagag 433
                |||||| || || || |||||||
Sbjct: 30006961 tgctggtattgttactgagagag 30006939



to top

>ref|NM_121124.3| Arabidopsis thaliana unknown protein AT5G10860 mRNA, complete cds
          Length = 1025

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 364 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 423

                                                                       
Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451
           |||| ||  |  || |  ||||||| ||| | ||||||||||||||||| ||||| ||||
Sbjct: 424 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 483

                                                                       
Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511
           | ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 484 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 543

                          
Query: 512 agctgatcacggtga 526
           |||| ||||| ||||
Sbjct: 544 agcttatcactgtga 558



to top

>gb|AF361845.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds
          Length = 975

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 364 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 423

                                                                       
Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451
           |||| ||  |  || |  ||||||| ||| | ||||||||||||||||| ||||| ||||
Sbjct: 424 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 483

                                                                       
Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511
           | ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 484 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 543

                          
Query: 512 agctgatcacggtga 526
           |||| ||||| ||||
Sbjct: 544 agcttatcactgtga 558



to top

>gb|AY066046.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds
          Length = 621

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 182 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 241

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 242 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 301

                                                                       
Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451
           |||| ||  |  || |  ||||||| ||| | ||||||||||||||||| ||||| ||||
Sbjct: 302 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 361

                                                                       
Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511
           | ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 362 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 421

                          
Query: 512 agctgatcacggtga 526
           |||| ||||| ||||
Sbjct: 422 agcttatcactgtga 436



to top

>emb|BX832342.1|CNS0A0VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZF09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 927

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 245 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 304

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 305 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 364

                                                                       
Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451
           |||| ||  |  || |  ||||||| ||| | ||||||||||||||||| ||||| ||||
Sbjct: 365 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 424

                                                                       
Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511
           | ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 425 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 484

                          
Query: 512 agctgatcacggtga 526
           |||| ||||| ||||
Sbjct: 485 agcttatcactgtga 499



to top

>emb|BX831340.1|CNS0A0OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS7ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 956

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 279 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 338

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 339 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 398

                                                                       
Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451
           |||| ||  |  || |  ||||||| ||| | ||||||||||||||||| ||||| ||||
Sbjct: 399 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 458

                                                                       
Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511
           | ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 459 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 518

                          
Query: 512 agctgatcacggtga 526
           |||| ||||| ||||
Sbjct: 519 agcttatcactgtga 533



to top

>emb|BX833110.1|CNS0A0JJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZF05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 994

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 287 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 346

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 347 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 406

                                                                       
Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451
           |||| ||  |  || |  ||||||| ||| | ||||||||||||||||| ||||| ||||
Sbjct: 407 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 466

                                                                       
Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511
           | ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 467 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 526

                          
Query: 512 agctgatcacggtga 526
           |||| ||||| ||||
Sbjct: 527 agcttatcactgtga 541



to top

>gb|AY389652.1| Hyacinthus orientalis CBS1 mRNA, partial cds
          Length = 818

 Score =  155 bits (78), Expect = 2e-34
 Identities = 228/278 (82%)
 Strand = Plus / Plus

                                                                       
Query: 244 tttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatggatca 303
           ||||| |||| ||| ||| | ||| |||| ||||| ||||| |||||||||||||| || 
Sbjct: 145 tttgaaagcaccaccgtttcggatgttttaaagtctaaaggcaagagtgctgatggttcc 204

                                                                       
Query: 304 tggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcgatgacacagcac 363
           ||||| ||||||||||||||||| ||||| |||||||| || ||||| ||||| || |||
Sbjct: 205 tggctgtggtgcaccacagatgacagtgtttatgatgccgtgaaatccatgactcaacac 264

                                                                       
Query: 364 aacgtgggagctttggtggttgttaaacctggggaagataaatcaattgctggcatcgtc 423
           || || || || |||||||| || || |||||||| || |||   |||||||| ||  | 
Sbjct: 265 aatgttggtgcgttggtggtggtaaagcctggggaggagaaagatattgctggaattatt 324

                                                                       
Query: 424 acagagagagattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaa 483
           || ||||||||||||||  ||||||| || || || ||  | || |||||||||||||| 
Sbjct: 325 actgagagagattatctgaggaaaattattgttcaaggaaggtcatccaagtcaaccaag 384

                                                 
Query: 484 gttggagatatcatgactgaagagaacaagctgatcac 521
           ||||| || ||||||||||||||||| |||||||||||
Sbjct: 385 gttggggacatcatgactgaagagaataagctgatcac 422



to top

>emb|BX832554.1|CNS0A15P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH7ZG08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 979

 Score =  143 bits (72), Expect = 7e-31
 Identities = 211/256 (82%), Gaps = 1/256 (0%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 257 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 316

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 317 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 376

                                                                       
Query: 392 -ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatc 450
            |||| ||  |  || |  ||||||| ||| | ||||||||||||||||| ||||| |||
Sbjct: 377 tctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatc 436

                                                                       
Query: 451 atcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaac 510
           || ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| 
Sbjct: 437 attgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaat 496

                           
Query: 511 aagctgatcacggtga 526
           ||||| ||||| ||||
Sbjct: 497 aagcttatcactgtga 512



to top

>emb|BX831549.1|CNS0A0VJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH14ZE07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 919

 Score =  143 bits (72), Expect = 7e-31
 Identities = 201/244 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
           |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 255 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 314

                                                                       
Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391
           | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| ||||
Sbjct: 315 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 374

                                                                       
Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451
           |||| ||  |  || |  ||||||| ||| | ||||||||||||||| | ||||| ||||
Sbjct: 375 ctggtgagcaacaagctcttgctggtatcattacagagagagattatatacggaagatca 434

                                                                       
Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511
           | ||||| ||  |||| ||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct: 435 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 494

               
Query: 512 agct 515
           ||||
Sbjct: 495 agct 498



to top

>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score =  141 bits (71), Expect = 3e-30
 Identities = 191/231 (82%)
 Strand = Plus / Plus

                                                                         
Query: 121   tcacatggcagtgtactcaaatctgctgtcctccaacacatcagtgttgtgaagcctgct 180
             |||||||||||||| || ||||  ||||| || ||||||||||| | |   || || || 
Sbjct: 66051 tcacatggcagtgtgcttaaatacgctgttctacaacacatcagcgctcccaaaccagca 66110

                                                                         
Query: 181   atgctgcccgctgtgttcccgcgcttcatgtcagtatcatctgctcaaatagaggagagc 240
             ||||| || ||||| ||  | || ||||||||||| ||||||||||   ||||||| || 
Sbjct: 66111 atgcttcctgctgtcttttctcgtttcatgtcagtttcatctgctcgcctagaggatagt 66170

                                                                         
Query: 241   ggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgga 300
             |||||||| |    ||||||  ||||| | |||||||| |||||||||||||||||||||
Sbjct: 66171 ggatttgaaactgccactgtatcagatgtcttgaagtctaaagggaagagtgctgatgga 66230

                                                                
Query: 301   tcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcg 351
             || |||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 66231 tcttggctctggtgcaccacagaggatactgtctatgatgctgtcaaatcg 66281



 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                         
Query: 351   gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410
             |||||| ||||||||||||||||||||||||||||| |||||||| || | |||||||||
Sbjct: 66380 gatgacgcagcacaacgtgggagctttggtggttgtcaaacctggagaggctaaatcaat 66439

                                    
Query: 411   tgctggcatcgtcacagagagag 433
             ||||||||| ||||| |||||||
Sbjct: 66440 tgctggcattgtcactgagagag 66462



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 506   agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558
             ||||||| |||||||| ||||| ||  |||||| |||||||||||||||||||
Sbjct: 67936 agaacaaactgatcacagtgaaccccaacaccaaagtcctgcaagcaatgcag 67988



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 432   agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
             |||||||||  |||||||||| ||||||||  |||| ||||||||||| || ||||| ||
Sbjct: 67766 agattatctaaggaaaatcatagtgcagggaagatcttccaagtcaactaaggttggcga 67825

                      
Query: 492   tatcatgac 500
              ||||||||
Sbjct: 67826 catcatgac 67834



to top

>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds
          Length = 160480

 Score =  131 bits (66), Expect = 3e-27
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                          
Query: 205    ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 264
              ||||||||||| ||||||||||   |||||||  | |||||||| |    |||||| |||
Sbjct: 135870 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 135929

                                                                          
Query: 265    gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 324
              ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 135930 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 135989

                                        
Query: 325    gatagtgtctatgatgctgtcaaatc 350
              ||||| |||||||| |||||||||||
Sbjct: 135990 gatagcgtctatgacgctgtcaaatc 136015



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                          
Query: 351    gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410
              |||||| ||||||||||||||||||||||||||||| ||||||||  |  ||||||||||
Sbjct: 136115 gatgactcagcacaacgtgggagctttggtggttgtcaaacctggacagaataaatcaat 136174

                                     
Query: 411    tgctggcatcgtcacagagagag 433
               |||||||| ||||| |||||||
Sbjct: 136175 cgctggcattgtcactgagagag 136197



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                          
Query: 432    agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
              ||||||||||||||||||||| ||||||||  | || ||||||||||| || ||||| ||
Sbjct: 137149 agattatctccggaaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcga 137208

                              
Query: 492    tatcatgactgaagag 507
               |||||||||||||||
Sbjct: 137209 catcatgactgaagag 137224



to top

>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf
              copia_LTR and Huck gypsy_LTR retrotransposons, complete
              sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR
              and Opie1 copia_LTR retrotransposons, complete sequence; Ji
              copia_LTR retrotransposon, complete sequence; and unknown
              protein (adh1B), cyclin H-1 (adh1C), unknown protein
              (adh1D), hypothetical protein (adh1E), and unknown protein
              (adh1F) genes, complete cds
          Length = 126039

 Score =  131 bits (66), Expect = 3e-27
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                          
Query: 205    ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 264
              ||||||||||| ||||||||||   |||||||  | |||||||| |    |||||| |||
Sbjct: 118941 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 119000

                                                                          
Query: 265    gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 324
              ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 119001 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 119060

                                        
Query: 325    gatagtgtctatgatgctgtcaaatc 350
              ||||| |||||||| |||||||||||
Sbjct: 119061 gatagcgtctatgacgctgtcaaatc 119086



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                          
Query: 351    gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410
              |||||| ||||||||||||||||||||||||||||| ||||||||  |  ||||||||||
Sbjct: 119186 gatgactcagcacaacgtgggagctttggtggttgtcaaacctggacagaataaatcaat 119245

                                     
Query: 411    tgctggcatcgtcacagagagag 433
               |||||||| ||||| |||||||
Sbjct: 119246 cgctggcattgtcactgagagag 119268



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                          
Query: 432    agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
              ||||||||||||||||||||| ||||||||  | || ||||||||||| || ||||| ||
Sbjct: 120220 agattatctccggaaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcga 120279

                              
Query: 492    tatcatgactgaagag 507
               |||||||||||||||
Sbjct: 120280 catcatgactgaagag 120295



to top

>gb|AY681118.1| Citrus limon unknown mRNA
          Length = 351

 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                       
Query: 411 tgctggcatcgtcacagagagagattatctccggaaaatcatcgtgcagggtcgatcctc 470
           |||||| ||| |||||||||||||||||||| |||| ||||| ||||||||  |||| ||
Sbjct: 51  tgctgggatcatcacagagagagattatctcaggaagatcatagtgcagggaagatcatc 110

                                                              
Query: 471 caagtcaaccaaagttggagatatcatgactgaagagaacaagctgatcac 521
           ||||||||| |||||||| || |||||||||||||||||| ||||||||||
Sbjct: 111 caagtcaactaaagttggggacatcatgactgaagagaaccagctgatcac 161



to top

>gb|AF459408.1| Narcissus pseudonarcissus DAFSAG13 senescence-associated putative
           protein mRNA, partial cds
          Length = 410

 Score =  113 bits (57), Expect = 6e-22
 Identities = 147/177 (83%)
 Strand = Plus / Plus

                                                                       
Query: 240 cggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgg 299
           |||||||||||||| ||| ||| ||||  |||| || || || || || |||||||||||
Sbjct: 228 cggatttgagagcaccacagtttcagacgttttaaaatcaaagggtaaaagtgctgatgg 287

                                                                       
Query: 300 atcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcgatgacaca 359
           ||| ||||| |||||||| ||||| || | ||||||||||||||| ||||| ||||| ||
Sbjct: 288 atcttggctttggtgcactacagaggacactgtctatgatgctgtgaaatcaatgactca 347

                                                                    
Query: 360 gcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaattgctgg 416
           |||||| || || |||||||| || || ||||||||||| || |||  |||||||||
Sbjct: 348 gcacaatgttggtgctttggttgtggtgaaacctggggaggagaaaggaattgctgg 404



to top

>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project)
          Length = 98473

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                         
Query: 432   agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491
             ||||||||| ||||| ||||| ||||| ||  |||| ||||| ||||| |||||||||||
Sbjct: 37264 agattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggaga 37205

                             
Query: 492   tatcatgactgaagag 507
              || ||||||||||||
Sbjct: 37204 cattatgactgaagag 37189



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                         
Query: 272   tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
             |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 37589 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 37530

                                
Query: 332   tctatgatgctgtcaaatc 350
             | ||||||||||| |||||
Sbjct: 37529 tttatgatgctgttaaatc 37511



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 351   gatgacacagcacaacgtgggagctttggtggttgttaaacctgg 395
             ||||||||| ||||| || || || ||||||||||| ||||||||
Sbjct: 37430 gatgacacaacacaatgttggtgccttggtggttgtgaaacctgg 37386



to top

>emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytosolic chorismate mutase, exons
            1-6
          Length = 5177

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                        
Query: 272  tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331
            |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | ||
Sbjct: 4850 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 4909

                               
Query: 332  tctatgatgctgtcaaatc 350
            | ||||||||||| |||||
Sbjct: 4910 tttatgatgctgttaaatc 4928



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 351  gatgacacagcacaacgtgggagctttggtggttgttaaacctgg 395
            ||||||||| ||||| || || || ||||||||||| ||||||||
Sbjct: 5009 gatgacacaacacaatgttggtgccttggtggttgtgaaacctgg 5053



to top

>gb|AC102014.6| Mus musculus chromosome 1, clone RP24-553D14, complete sequence
          Length = 142451

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 491   atatcatgactgaagagaacaa 512
             ||||||||||||||||||||||
Sbjct: 69256 atatcatgactgaagagaacaa 69235



to top

>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 92      aaatgcagcgagcaattcaag 112
               |||||||||||||||||||||
Sbjct: 1152267 aaatgcagcgagcaattcaag 1152247



to top

>emb|BX043922.1|CNS0961Y Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC17AB11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 913

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 296 gaacaagctgatcacggtgaa 316



to top

>emb|BX041367.1|CNS0942Z Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC12CH04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 940

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 292 gaacaagctgatcacggtgaa 312



to top

>emb|BX039334.1|CNS092II Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC1AE07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1002

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 741 gaacaagctgatcacggtgaa 721



to top

>emb|BX039333.1|CNS092IH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC1AE07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1064

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 293 gaacaagctgatcacggtgaa 313



to top

>emb|BX023232.1|CNS08Q38 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA35CB03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 766

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 759 gaacaagctgatcacggtgaa 739



to top

>emb|BX023231.1|CNS08Q37 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA35CB03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 978

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 279 gaacaagctgatcacggtgaa 299



to top

>emb|BX012270.1|CNS08HMQ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA19CA12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 979

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 277 gaacaagctgatcacggtgaa 297



to top

>ref|XM_309432.2| Anopheles gambiae str. PEST ENSANGP00000011203
           (ENSANGG00000008714), partial mRNA
          Length = 978

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 507 gaacaagctgatcacggtgaa 527
           |||||||||||||||||||||
Sbjct: 285 gaacaagctgatcacggtgaa 305



to top

>ref|NM_112224.2| Arabidopsis thaliana RNA binding / ribonuclease III AT3G13740 mRNA,
           complete cds
          Length = 1082

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 468 ctccaagtcaaccaaagttggaga 491
           ||||||||| ||||||||||||||
Sbjct: 284 ctccaagtccaccaaagttggaga 307



to top

>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete
              sequence
          Length = 212903

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ctgtcctccaacacatcagt 165
              ||||||||||||||||||||
Sbjct: 147714 ctgtcctccaacacatcagt 147733



to top

>emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chromosome 1p31.3-32.3
             Contains gene FLJ20331, two novel genes, the SFRS11 gene
             for arginine/serine-rich 11 splicing factor and the 3' end
             of gene DKFZP566D1346, complete sequence
          Length = 131612

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tattttgaagtccaaaggga 286
             ||||||||||||||||||||
Sbjct: 24496 tattttgaagtccaaaggga 24515



to top

>emb|AL157413.18| Human DNA sequence from clone RP11-526K17 on chromosome 20 Contains a
              novel gene and part of the C20orf39 gene for chromosome 20
              open reading frame 39, complete sequence
          Length = 133207

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    aagtccaaagggaagagtgc 293
              ||||||||||||||||||||
Sbjct: 126202 aagtccaaagggaagagtgc 126183



to top

>gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, complete sequence
          Length = 177163

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    agcactgttgcagatatttt 272
              ||||||||||||||||||||
Sbjct: 119062 agcactgttgcagatatttt 119081



to top

>gb|AY072533.1| Arabidopsis thaliana unknown protein (At3g13730; MMM17.16) mRNA,
           complete cds
          Length = 774

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 468 ctccaagtcaaccaaagttggaga 491
           ||||||||| ||||||||||||||
Sbjct: 245 ctccaagtccaccaaagttggaga 268



to top

>gb|AF386979.1|AF386979 Arabidopsis thaliana Unknown protein (MMM17.15) mRNA, complete cds
          Length = 1082

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 468 ctccaagtcaaccaaagttggaga 491
           ||||||||| ||||||||||||||
Sbjct: 284 ctccaagtccaccaaagttggaga 307



to top

>gb|AC087528.15| Homo sapiens chromosome 15, clone RP11-497M17, complete sequence
          Length = 142965

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   agatatcatgactgaagaga 508
             ||||||||||||||||||||
Sbjct: 70178 agatatcatgactgaagaga 70159



to top

>emb|BX826102.1|CNS0A7K6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZG01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1046

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 468 ctccaagtcaaccaaagttggaga 491
           ||||||||| ||||||||||||||
Sbjct: 255 ctccaagtccaccaaagttggaga 278



to top

>emb|BX825866.1|CNS0A7IM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZD10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 886

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 468 ctccaagtcaaccaaagttggaga 491
           ||||||||| ||||||||||||||
Sbjct: 194 ctccaagtccaccaaagttggaga 217



to top

>gb|AY084429.1| Arabidopsis thaliana clone 108144 mRNA, complete sequence
          Length = 1071

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 468 ctccaagtcaaccaaagttggaga 491
           ||||||||| ||||||||||||||
Sbjct: 283 ctccaagtccaccaaagttggaga 306



to top

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 503     aagagaacaagctgatcacg 522
               ||||||||||||||||||||
Sbjct: 5325622 aagagaacaagctgatcacg 5325603



to top

>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17
          Length = 80733

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 468   ctccaagtcaaccaaagttggaga 491
             ||||||||| ||||||||||||||
Sbjct: 49572 ctccaagtccaccaaagttggaga 49595



to top

>gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, complete sequence
          Length = 157232

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ctgtcctccaacacatcagt 165
             ||||||||||||||||||||
Sbjct: 62256 ctgtcctccaacacatcagt 62237


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,851,638
Number of Sequences: 3902068
Number of extensions: 4851638
Number of successful extensions: 79286
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79086
Number of HSP's gapped (non-prelim): 188
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top