Clone Name | bart35g04 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1169 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Plus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 184 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 243 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 244 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 303 Query: 322 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 304 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 363 Query: 382 gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441 |||||||||||||| | ||||||||||||||||| || || || ||||||||||| ||| Sbjct: 364 gttgttaaacctggacaggataaatcaattgctggtattgttactgagagagattacctc 423 Query: 442 cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501 |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 424 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 483 Query: 502 gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 484 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 540 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 75 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 134 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 135 gcgacacatcagtg 148
>dbj|AB110184.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 14FPB077 Length = 1057 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Plus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 135 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 194 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 195 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 254 Query: 322 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 255 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 314 Query: 382 gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441 |||||||||||||| | ||||||||||||||||| || || || ||||||||||| ||| Sbjct: 315 gttgttaaacctggacaggataaatcaattgctggtattgttactgagagagattacctc 374 Query: 442 cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501 |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 375 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 434 Query: 502 gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 435 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 491 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 26 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 85 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 86 gcgacacatcagtg 99
>dbj|AK061742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F01, full insert sequence Length = 1067 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Plus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 255 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 314 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 315 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 374 Query: 322 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 375 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 434 Query: 382 gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441 |||||||||||||| | ||||||||||||||||| || || || ||||||||||| ||| Sbjct: 435 gttgttaaacctggacaggataaatcaattgctggtattgttactgagagagattacctc 494 Query: 442 cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501 |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 495 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 554 Query: 502 gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 555 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 611 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 146 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 205 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 206 gcgacacatcagtg 219
>dbj|AK068510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152K18, full insert sequence Length = 3163 Score = 385 bits (194), Expect = e-103 Identities = 317/357 (88%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 2245 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 2304 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 2305 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 2364 Query: 322 gatgatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtg 381 ||||| ||||||||||||||||||||| ||||| || ||||| || |||||| ||||| Sbjct: 2365 gatgactctgtctatgatgctgtcaaatctatgacgcaacacaatgttggagctctggtg 2424 Query: 382 gttgttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctc 441 |||||||||||||| | ||||||||||||||||| || || || |||||| ||| ||| Sbjct: 2425 gttgttaaacctggacaggataaatcaattgctggtattgttactgagaga--ttacctc 2482 Query: 442 cggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgact 501 |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 2483 aggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagacatcatgact 2542 Query: 502 gaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2543 gaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 2599 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 2136 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 2195 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 2196 gcgacacatcagtg 2209
>gb|AY104325.1| Zea mays PCO141653 mRNA sequence Length = 1167 Score = 337 bits (170), Expect = 2e-89 Identities = 308/354 (87%) Strand = Plus / Plus Query: 205 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 264 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 300 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 359 Query: 265 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 324 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 360 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 419 Query: 325 gatagtgtctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggtt 384 ||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 420 gatagcgtctatgacgctgtcaaatctatgactcagcacaacgtgggagctttggtggtt 479 Query: 385 gttaaacctggggaagataaatcaattgctggcatcgtcacagagagagattatctccgg 444 || |||||||| | |||||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 480 gtcaaacctggacagaataaatcaatcgctggcattgtcactgagagagattatctccgg 539 Query: 445 aaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaa 504 |||||||| |||||||| | || ||||||||||| || ||||| || |||||||||||| Sbjct: 540 aaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcgacatcatgactgaa 599 Query: 505 gagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 |||||||| |||||||| ||||| || ||||||| |||||||| ||||||||| Sbjct: 600 gagaacaaactgatcacagtgaatcccgacaccaaggtcctgcaggcaatgcag 653
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 29915824 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 29915765 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 29915764 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 29915705 Query: 322 gatgatagtgtctatgatgctgtcaaatc 350 ||||| ||||||||||||||||||||| Sbjct: 29915704 gatgactctgtctatgatgctgtcaaatc 29915676 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 |||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 29915146 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 29915087 Query: 492 tatcatgactgaagag 507 ||||||||||||||| Sbjct: 29915086 catcatgactgaagag 29915071 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 506 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 29914823 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 29914771 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 29915933 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 29915874 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 29915873 gcgacacatcagtg 29915860 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410 |||||| || ||||| || |||||| ||||||||||||||||||| | ||||||||||| Sbjct: 29915599 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 29915540 Query: 411 tgctggcatcgtcacagagagag 433 |||||| || || || ||||||| Sbjct: 29915539 tgctggtattgttactgagagag 29915517
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Plus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 94782 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 94841 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 94842 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 94901 Query: 322 gatgatagtgtctatgatgctgtcaaatc 350 ||||| ||||||||||||||||||||| Sbjct: 94902 gatgactctgtctatgatgctgtcaaatc 94930 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 |||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 95460 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 95519 Query: 492 tatcatgactgaagag 507 ||||||||||||||| Sbjct: 95520 catcatgactgaagag 95535 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 506 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95783 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 95835 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 94673 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 94732 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 94733 gcgacacatcagtg 94746 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410 |||||| || ||||| || |||||| ||||||||||||||||||| | ||||||||||| Sbjct: 95007 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 95066 Query: 411 tgctggcatcgtcacagagagag 433 |||||| || || || ||||||| Sbjct: 95067 tgctggtattgttactgagagag 95089
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 81765 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 81706 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 81705 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 81646 Query: 322 gatgatagtgtctatgatgctgtcaaatc 350 ||||| ||||||||||||||||||||| Sbjct: 81645 gatgactctgtctatgatgctgtcaaatc 81617 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 |||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 81087 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 81028 Query: 492 tatcatgactgaagag 507 ||||||||||||||| Sbjct: 81027 catcatgactgaagag 81012 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 506 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 80764 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 80712 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 81874 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 81815 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 81814 gcgacacatcagtg 81801 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410 |||||| || ||||| || |||||| ||||||||||||||||||| | ||||||||||| Sbjct: 81540 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 81481 Query: 411 tgctggcatcgtcacagagagag 433 |||||| || || || ||||||| Sbjct: 81480 tgctggtattgttactgagagag 81458
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 202 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 261 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 30007246 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 30007187 Query: 262 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 321 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 30007186 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 30007127 Query: 322 gatgatagtgtctatgatgctgtcaaatc 350 ||||| ||||||||||||||||||||| Sbjct: 30007126 gatgactctgtctatgatgctgtcaaatc 30007098 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 |||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 30006568 agattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggaga 30006509 Query: 492 tatcatgactgaagag 507 ||||||||||||||| Sbjct: 30006508 catcatgactgaagag 30006493 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 506 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 30006245 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcag 30006193 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 93 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 152 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 30007355 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 30007296 Query: 153 ccaacacatcagtg 166 | ||||||||||| Sbjct: 30007295 gcgacacatcagtg 30007282 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410 |||||| || ||||| || |||||| ||||||||||||||||||| | ||||||||||| Sbjct: 30007021 gatgacgcaacacaatgttggagctctggtggttgttaaacctggacaggataaatcaat 30006962 Query: 411 tgctggcatcgtcacagagagag 433 |||||| || || || ||||||| Sbjct: 30006961 tgctggtattgttactgagagag 30006939
>ref|NM_121124.3| Arabidopsis thaliana unknown protein AT5G10860 mRNA, complete cds Length = 1025 Score = 157 bits (79), Expect = 5e-35 Identities = 211/255 (82%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 364 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 423 Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451 |||| || | || | ||||||| ||| | ||||||||||||||||| ||||| |||| Sbjct: 424 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 483 Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511 | ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 484 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 543 Query: 512 agctgatcacggtga 526 |||| ||||| |||| Sbjct: 544 agcttatcactgtga 558
>gb|AF361845.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 975 Score = 157 bits (79), Expect = 5e-35 Identities = 211/255 (82%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 364 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 423 Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451 |||| || | || | ||||||| ||| | ||||||||||||||||| ||||| |||| Sbjct: 424 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 483 Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511 | ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 484 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 543 Query: 512 agctgatcacggtga 526 |||| ||||| |||| Sbjct: 544 agcttatcactgtga 558
>gb|AY066046.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 621 Score = 157 bits (79), Expect = 5e-35 Identities = 211/255 (82%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 182 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 241 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 242 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 301 Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451 |||| || | || | ||||||| ||| | ||||||||||||||||| ||||| |||| Sbjct: 302 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 361 Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511 | ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 362 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 421 Query: 512 agctgatcacggtga 526 |||| ||||| |||| Sbjct: 422 agcttatcactgtga 436
>emb|BX832342.1|CNS0A0VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 927 Score = 157 bits (79), Expect = 5e-35 Identities = 211/255 (82%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 245 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 304 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 305 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 364 Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451 |||| || | || | ||||||| ||| | ||||||||||||||||| ||||| |||| Sbjct: 365 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 424 Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511 | ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 425 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 484 Query: 512 agctgatcacggtga 526 |||| ||||| |||| Sbjct: 485 agcttatcactgtga 499
>emb|BX831340.1|CNS0A0OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 157 bits (79), Expect = 5e-35 Identities = 211/255 (82%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 279 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 338 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 339 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 398 Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451 |||| || | || | ||||||| ||| | ||||||||||||||||| ||||| |||| Sbjct: 399 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 458 Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511 | ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 459 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 518 Query: 512 agctgatcacggtga 526 |||| ||||| |||| Sbjct: 519 agcttatcactgtga 533
>emb|BX833110.1|CNS0A0JJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 157 bits (79), Expect = 5e-35 Identities = 211/255 (82%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 287 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 346 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 347 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 406 Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451 |||| || | || | ||||||| ||| | ||||||||||||||||| ||||| |||| Sbjct: 407 ctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatca 466 Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511 | ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 467 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 526 Query: 512 agctgatcacggtga 526 |||| ||||| |||| Sbjct: 527 agcttatcactgtga 541
>gb|AY389652.1| Hyacinthus orientalis CBS1 mRNA, partial cds Length = 818 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Plus Query: 244 tttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatggatca 303 ||||| |||| ||| ||| | ||| |||| ||||| ||||| |||||||||||||| || Sbjct: 145 tttgaaagcaccaccgtttcggatgttttaaagtctaaaggcaagagtgctgatggttcc 204 Query: 304 tggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcgatgacacagcac 363 ||||| ||||||||||||||||| ||||| |||||||| || ||||| ||||| || ||| Sbjct: 205 tggctgtggtgcaccacagatgacagtgtttatgatgccgtgaaatccatgactcaacac 264 Query: 364 aacgtgggagctttggtggttgttaaacctggggaagataaatcaattgctggcatcgtc 423 || || || || |||||||| || || |||||||| || ||| |||||||| || | Sbjct: 265 aatgttggtgcgttggtggtggtaaagcctggggaggagaaagatattgctggaattatt 324 Query: 424 acagagagagattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaa 483 || |||||||||||||| ||||||| || || || || | || |||||||||||||| Sbjct: 325 actgagagagattatctgaggaaaattattgttcaaggaaggtcatccaagtcaaccaag 384 Query: 484 gttggagatatcatgactgaagagaacaagctgatcac 521 ||||| || ||||||||||||||||| ||||||||||| Sbjct: 385 gttggggacatcatgactgaagagaataagctgatcac 422
>emb|BX832554.1|CNS0A15P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 143 bits (72), Expect = 7e-31 Identities = 211/256 (82%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 257 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 316 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 317 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 376 Query: 392 -ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatc 450 |||| || | || | ||||||| ||| | ||||||||||||||||| ||||| ||| Sbjct: 377 tctggtgagcaacaagctcttgctggtatcattacagagagagattatctacggaagatc 436 Query: 451 atcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaac 510 || ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 437 attgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaat 496 Query: 511 aagctgatcacggtga 526 ||||| ||||| |||| Sbjct: 497 aagcttatcactgtga 512
>emb|BX831549.1|CNS0A0VJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 143 bits (72), Expect = 7e-31 Identities = 201/244 (82%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 255 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 314 Query: 332 tctatgatgctgtcaaatcgatgacacagcacaacgtgggagctttggtggttgttaaac 391 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |||| Sbjct: 315 tttatgatgctgttaaatccatgacacaacacaatgttggtgccttggtggttgtgaaac 374 Query: 392 ctggggaagataaatcaattgctggcatcgtcacagagagagattatctccggaaaatca 451 |||| || | || | ||||||| ||| | ||||||||||||||| | ||||| |||| Sbjct: 375 ctggtgagcaacaagctcttgctggtatcattacagagagagattatatacggaagatca 434 Query: 452 tcgtgcagggtcgatcctccaagtcaaccaaagttggagatatcatgactgaagagaaca 511 | ||||| || |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 435 ttgtgcaagggagatcatccaaatcaacaaaagttggagacattatgactgaagagaata 494 Query: 512 agct 515 |||| Sbjct: 495 agct 498
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 141 bits (71), Expect = 3e-30 Identities = 191/231 (82%) Strand = Plus / Plus Query: 121 tcacatggcagtgtactcaaatctgctgtcctccaacacatcagtgttgtgaagcctgct 180 |||||||||||||| || |||| ||||| || ||||||||||| | | || || || Sbjct: 66051 tcacatggcagtgtgcttaaatacgctgttctacaacacatcagcgctcccaaaccagca 66110 Query: 181 atgctgcccgctgtgttcccgcgcttcatgtcagtatcatctgctcaaatagaggagagc 240 ||||| || ||||| || | || ||||||||||| |||||||||| ||||||| || Sbjct: 66111 atgcttcctgctgtcttttctcgtttcatgtcagtttcatctgctcgcctagaggatagt 66170 Query: 241 ggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgga 300 |||||||| | |||||| ||||| | |||||||| ||||||||||||||||||||| Sbjct: 66171 ggatttgaaactgccactgtatcagatgtcttgaagtctaaagggaagagtgctgatgga 66230 Query: 301 tcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcg 351 || |||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 66231 tcttggctctggtgcaccacagaggatactgtctatgatgctgtcaaatcg 66281 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410 |||||| ||||||||||||||||||||||||||||| |||||||| || | ||||||||| Sbjct: 66380 gatgacgcagcacaacgtgggagctttggtggttgtcaaacctggagaggctaaatcaat 66439 Query: 411 tgctggcatcgtcacagagagag 433 ||||||||| ||||| ||||||| Sbjct: 66440 tgctggcattgtcactgagagag 66462 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 506 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcag 558 ||||||| |||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 67936 agaacaaactgatcacagtgaaccccaacaccaaagtcctgcaagcaatgcag 67988 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||| |||||||| |||| ||||||||||| || ||||| || Sbjct: 67766 agattatctaaggaaaatcatagtgcagggaagatcttccaagtcaactaaggttggcga 67825 Query: 492 tatcatgac 500 |||||||| Sbjct: 67826 catcatgac 67834
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 205 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 264 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 135870 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 135929 Query: 265 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 324 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135930 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 135989 Query: 325 gatagtgtctatgatgctgtcaaatc 350 ||||| |||||||| ||||||||||| Sbjct: 135990 gatagcgtctatgacgctgtcaaatc 136015 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410 |||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 136115 gatgactcagcacaacgtgggagctttggtggttgtcaaacctggacagaataaatcaat 136174 Query: 411 tgctggcatcgtcacagagagag 433 |||||||| ||||| ||||||| Sbjct: 136175 cgctggcattgtcactgagagag 136197 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 ||||||||||||||||||||| |||||||| | || ||||||||||| || ||||| || Sbjct: 137149 agattatctccggaaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcga 137208 Query: 492 tatcatgactgaagag 507 ||||||||||||||| Sbjct: 137209 catcatgactgaagag 137224
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 205 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 264 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 118941 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 119000 Query: 265 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 324 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 119001 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 119060 Query: 325 gatagtgtctatgatgctgtcaaatc 350 ||||| |||||||| ||||||||||| Sbjct: 119061 gatagcgtctatgacgctgtcaaatc 119086 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaat 410 |||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 119186 gatgactcagcacaacgtgggagctttggtggttgtcaaacctggacagaataaatcaat 119245 Query: 411 tgctggcatcgtcacagagagag 433 |||||||| ||||| ||||||| Sbjct: 119246 cgctggcattgtcactgagagag 119268 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 ||||||||||||||||||||| |||||||| | || ||||||||||| || ||||| || Sbjct: 120220 agattatctccggaaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcga 120279 Query: 492 tatcatgactgaagag 507 ||||||||||||||| Sbjct: 120280 catcatgactgaagag 120295
>gb|AY681118.1| Citrus limon unknown mRNA Length = 351 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 411 tgctggcatcgtcacagagagagattatctccggaaaatcatcgtgcagggtcgatcctc 470 |||||| ||| |||||||||||||||||||| |||| ||||| |||||||| |||| || Sbjct: 51 tgctgggatcatcacagagagagattatctcaggaagatcatagtgcagggaagatcatc 110 Query: 471 caagtcaaccaaagttggagatatcatgactgaagagaacaagctgatcac 521 ||||||||| |||||||| || |||||||||||||||||| |||||||||| Sbjct: 111 caagtcaactaaagttggggacatcatgactgaagagaaccagctgatcac 161
>gb|AF459408.1| Narcissus pseudonarcissus DAFSAG13 senescence-associated putative protein mRNA, partial cds Length = 410 Score = 113 bits (57), Expect = 6e-22 Identities = 147/177 (83%) Strand = Plus / Plus Query: 240 cggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgg 299 |||||||||||||| ||| ||| |||| |||| || || || || || ||||||||||| Sbjct: 228 cggatttgagagcaccacagtttcagacgttttaaaatcaaagggtaaaagtgctgatgg 287 Query: 300 atcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcgatgacaca 359 ||| ||||| |||||||| ||||| || | ||||||||||||||| ||||| ||||| || Sbjct: 288 atcttggctttggtgcactacagaggacactgtctatgatgctgtgaaatcaatgactca 347 Query: 360 gcacaacgtgggagctttggtggttgttaaacctggggaagataaatcaattgctgg 416 |||||| || || |||||||| || || ||||||||||| || ||| ||||||||| Sbjct: 348 gcacaatgttggtgctttggttgtggtgaaacctggggaggagaaaggaattgctgg 404
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project) Length = 98473 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 432 agattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggaga 491 ||||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 37264 agattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggaga 37205 Query: 492 tatcatgactgaagag 507 || |||||||||||| Sbjct: 37204 cattatgactgaagag 37189 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 37589 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 37530 Query: 332 tctatgatgctgtcaaatc 350 | ||||||||||| ||||| Sbjct: 37529 tttatgatgctgttaaatc 37511 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctgg 395 ||||||||| ||||| || || || ||||||||||| |||||||| Sbjct: 37430 gatgacacaacacaatgttggtgccttggtggttgtgaaacctgg 37386
>emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytosolic chorismate mutase, exons 1-6 Length = 5177 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 272 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 331 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 4850 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 4909 Query: 332 tctatgatgctgtcaaatc 350 | ||||||||||| ||||| Sbjct: 4910 tttatgatgctgttaaatc 4928 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 351 gatgacacagcacaacgtgggagctttggtggttgttaaacctgg 395 ||||||||| ||||| || || || ||||||||||| |||||||| Sbjct: 5009 gatgacacaacacaatgttggtgccttggtggttgtgaaacctgg 5053
>gb|AC102014.6| Mus musculus chromosome 1, clone RP24-553D14, complete sequence Length = 142451 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 491 atatcatgactgaagagaacaa 512 |||||||||||||||||||||| Sbjct: 69256 atatcatgactgaagagaacaa 69235
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 aaatgcagcgagcaattcaag 112 ||||||||||||||||||||| Sbjct: 1152267 aaatgcagcgagcaattcaag 1152247
>emb|BX043922.1|CNS0961Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC17AB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 913 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 296 gaacaagctgatcacggtgaa 316
>emb|BX041367.1|CNS0942Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC12CH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 292 gaacaagctgatcacggtgaa 312
>emb|BX039334.1|CNS092II Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC1AE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1002 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 741 gaacaagctgatcacggtgaa 721
>emb|BX039333.1|CNS092IH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC1AE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1064 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 293 gaacaagctgatcacggtgaa 313
>emb|BX023232.1|CNS08Q38 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA35CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 766 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 759 gaacaagctgatcacggtgaa 739
>emb|BX023231.1|CNS08Q37 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 978 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 279 gaacaagctgatcacggtgaa 299
>emb|BX012270.1|CNS08HMQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19CA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 979 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 277 gaacaagctgatcacggtgaa 297
>ref|XM_309432.2| Anopheles gambiae str. PEST ENSANGP00000011203 (ENSANGG00000008714), partial mRNA Length = 978 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gaacaagctgatcacggtgaa 527 ||||||||||||||||||||| Sbjct: 285 gaacaagctgatcacggtgaa 305
>ref|NM_112224.2| Arabidopsis thaliana RNA binding / ribonuclease III AT3G13740 mRNA, complete cds Length = 1082 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||||||| Sbjct: 284 ctccaagtccaccaaagttggaga 307
>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete sequence Length = 212903 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctgtcctccaacacatcagt 165 |||||||||||||||||||| Sbjct: 147714 ctgtcctccaacacatcagt 147733
>emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chromosome 1p31.3-32.3 Contains gene FLJ20331, two novel genes, the SFRS11 gene for arginine/serine-rich 11 splicing factor and the 3' end of gene DKFZP566D1346, complete sequence Length = 131612 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tattttgaagtccaaaggga 286 |||||||||||||||||||| Sbjct: 24496 tattttgaagtccaaaggga 24515
>emb|AL157413.18| Human DNA sequence from clone RP11-526K17 on chromosome 20 Contains a novel gene and part of the C20orf39 gene for chromosome 20 open reading frame 39, complete sequence Length = 133207 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aagtccaaagggaagagtgc 293 |||||||||||||||||||| Sbjct: 126202 aagtccaaagggaagagtgc 126183
>gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, complete sequence Length = 177163 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 agcactgttgcagatatttt 272 |||||||||||||||||||| Sbjct: 119062 agcactgttgcagatatttt 119081
>gb|AY072533.1| Arabidopsis thaliana unknown protein (At3g13730; MMM17.16) mRNA, complete cds Length = 774 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||||||| Sbjct: 245 ctccaagtccaccaaagttggaga 268
>gb|AF386979.1|AF386979 Arabidopsis thaliana Unknown protein (MMM17.15) mRNA, complete cds Length = 1082 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||||||| Sbjct: 284 ctccaagtccaccaaagttggaga 307
>gb|AC087528.15| Homo sapiens chromosome 15, clone RP11-497M17, complete sequence Length = 142965 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 agatatcatgactgaagaga 508 |||||||||||||||||||| Sbjct: 70178 agatatcatgactgaagaga 70159
>emb|BX826102.1|CNS0A7K6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZG01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1046 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||||||| Sbjct: 255 ctccaagtccaccaaagttggaga 278
>emb|BX825866.1|CNS0A7IM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 886 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||||||| Sbjct: 194 ctccaagtccaccaaagttggaga 217
>gb|AY084429.1| Arabidopsis thaliana clone 108144 mRNA, complete sequence Length = 1071 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||||||| Sbjct: 283 ctccaagtccaccaaagttggaga 306
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 aagagaacaagctgatcacg 522 |||||||||||||||||||| Sbjct: 5325622 aagagaacaagctgatcacg 5325603
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctccaagtcaaccaaagttggaga 491 ||||||||| |||||||||||||| Sbjct: 49572 ctccaagtccaccaaagttggaga 49595
>gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, complete sequence Length = 157232 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ctgtcctccaacacatcagt 165 |||||||||||||||||||| Sbjct: 62256 ctgtcctccaacacatcagt 62237 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,851,638 Number of Sequences: 3902068 Number of extensions: 4851638 Number of successful extensions: 79286 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79086 Number of HSP's gapped (non-prelim): 188 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)