>RETO_PAPSO (P93479) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 535

 Score =  107 bits (267), Expect = 2e-23
 Identities = 53/117 (45%), Positives = 75/117 (64%)
 Frame = +2

Query: 212 IRNPKFFTPTTVRPLCIVTPTNASHVQAAVLCGRRHDVRLRVRSGGHDYEGLSYRSERPE 391
           ++NP F  PT  +P  IV P +   + + V C  R    +R+RSGGH YEGLSY ++ P 
Sbjct: 62  MQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTADTP- 120

Query: 392 VFAVVDLANLRAVRVDRAAGTAWVDSGATVGELYYAVAKAAPGLAFSAGVRSTMGLG 562
            F +VD+ NL  + +D  + TAWV+SGAT+GELYYA+A++   L F+AG   T+G G
Sbjct: 121 -FVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSG 176

>RETO_ESCCA (P30986) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 538

 Score =  102 bits (253), Expect = 1e-21
 Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 3/164 (1%)
 Frame = +2

Query: 80  LGCYVSVPSLAASG-DFLQCLS-SSIPSERVXXXXXXXXXXXXXX-XIRNPKFFTPTTVR 250
           L  ++S+ + A  G D L CL+ + + +  V                I+NP F      +
Sbjct: 11  LSIFLSLLNCALGGNDLLSCLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISK 70

Query: 251 PLCIVTPTNASHVQAAVLCGRRHDVRLRVRSGGHDYEGLSYRSERPEVFAVVDLANLRAV 430
           P  I+ P +   +   + C R+    +R+RSGGH YEGLSY S+ P  F ++DL NL  V
Sbjct: 71  PSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTP--FILIDLMNLNRV 128

Query: 431 RVDRAAGTAWVDSGATVGELYYAVAKAAPGLAFSAGVRSTMGLG 562
            +D  + TAWV+SG+T+GELYYA+ +++  L F+AG   T+G G
Sbjct: 129 SIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTG 172

>HDNO_ARTOX (P08159) 6-hydroxy-D-nicotine oxidase (EC 1.5.3.6) (6-HDNO)|
          Length = 458

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 29/103 (28%), Positives = 46/103 (44%)
 Frame = +2

Query: 248 RPLCIVTPTNASHVQAAVLCGRRHDVRLRVRSGGHDYEGLSYRSERPEVFAVVDLANLRA 427
           RP  I    +A  V  +V     + + + VRSGGH+  G +      +   V+DL  + +
Sbjct: 37  RPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATN----DGGIVLDLRLMNS 92

Query: 428 VRVDRAAGTAWVDSGATVGELYYAVAKAAPGLAFSAGVRSTMG 556
           + +D A   A +  G   G+L    AK   GLA   G+   +G
Sbjct: 93  IHIDTAGSRARIGGGVISGDLVKEAAKF--GLAAVTGMHPKVG 133

>ALL5_APIGR (P81943) Allergen Api g 5 (Fragments)|
          Length = 86

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +2

Query: 416 NLRAVRVDRAAGTAWVDSGATVGELYYAVAKA 511
           NL+AV  D  A TA V +GAT+GE+YY +  A
Sbjct: 24  NLKAVIADPVAKTAVVQAGATLGEVYYXIIYA 55

>YEK3_SCHPO (O36015) Putative ribosomal RNA methyltransferase C4F10.03c (EC|
           2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase)
          Length = 285

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 221 PKFFTPTTVRPLCIVTPTNASHVQAAVLCG 310
           P  F P   +PLC++ PTNA  +   + CG
Sbjct: 210 PSNFQPDLTKPLCVIDPTNAHEIAPFIACG 239

>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor|
          Length = 684

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 17/75 (22%)
 Frame = -2

Query: 547 RAHAGREREPGRRLGDGVVQLPDR---------RARVHPRGARGPVDAHG--------AE 419
           +  AGR   PG +  +G+  LP R         R R    G  GP    G         E
Sbjct: 318 KGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMPGE 377

Query: 418 VGEVDHREHLGALGP 374
            GE  HR   GALGP
Sbjct: 378 RGEAGHRGSAGALGP 392

>MPAG4_DACGL (P82946) Major pollen allergen Dac g 4 (Fragments)|
          Length = 55

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +2

Query: 446 AGTAWVDSGATVGELYYAV 502
           A TAWVDSGA +GEL Y V
Sbjct: 24  ARTAWVDSGAQLGELSYGV 42

>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 23/71 (32%)
 Frame = -2

Query: 271  GRHDAERPHSRRGEEL--------------------GVPDGRHQDGSERRRTRRQYALA- 155
            G H   R H R GEE                     G  +G   DG ERRR  R  A A 
Sbjct: 954  GEHRRHRAHRRPGEEGPEDKAERRARHREGSRPARGGEGEGEGPDGGERRRRHRHGAPAT 1013

Query: 154  --GDARREALE 128
              GDARRE  E
Sbjct: 1014 YEGDARREDKE 1024

>RS3_RALSO (Q8XV18) 30S ribosomal protein S3|
          Length = 264

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -2

Query: 271 GRHDA---ERPHSRRGEELGVPDGRHQDGSERRRTRRQYALAGDARREALEEVAG 116
           GR+DA   E P   R +  G P+GR ++G  R   +R+ A AG  R    +   G
Sbjct: 209 GRNDAPVVEEPQEERRKRPGRPEGRRREGEGRPGGQRRGAGAGGRRSGGADAKTG 263

>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B|
            subunit (Voltage-gated calcium channel alpha subunit
            Cav2.2) (DOE-4)
          Length = 2326

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -2

Query: 283  GRVGGRHDAERPHSRRGEELG--VPDGRHQDGSERRRTRRQYALAGDARREALE 128
            G  G RH   +  SR G   G  V    H +G+ERRR  RQ   + +   E  E
Sbjct: 946  GTKGERHSRAKDGSRSGGREGEAVSRSHHAEGAERRRKHRQKVASTNESEEKRE 999

>MGR6_HUMAN (O15303) Metabotropic glutamate receptor 6 precursor (mGluR6)|
          Length = 877

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +2

Query: 374 RSERPEVFAVVDLANLRAVRVDRAAGTAWVDSGATVGELYYAVAKAAPGLA 526
           R+  P + A++ LA L    + RAAG+  +  G T+G L+   A+ A G A
Sbjct: 6   RAREPLLVALLPLAWLAQAGLARAAGSVRLAGGLTLGGLFPVHARGAAGRA 56

>TAP1_MOUSE (P21958) Antigen peptide transporter 1 (APT1) (Peptide transporter|
           TAP1) (ATP-binding cassette sub-family B member 2)
           (Histocompatibility antigen modifier 1)
          Length = 724

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 353 DYEGLSYRSERPEVFAVVDLANLRAVRVDRAAGTAWVDSG 472
           D  GL Y + RP+ FA+  +A L A  +    G+ W  SG
Sbjct: 102 DSAGLLYWNSRPDAFAISYVAALPAAALWHKLGSLWAPSG 141

>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 25/82 (30%), Positives = 34/82 (41%)
 Frame = -2

Query: 283 GRVGGRHDAERPHSRRGEELGVPDGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQG 104
           GR GG+ D +R            DG+ +DG   R  +RQ A AG  R +      GGS+ 
Sbjct: 243 GRPGGQRDGQR------------DGQ-RDGQGNRGGQRQGAGAGGPRPQGGPRPQGGSRP 289

Query: 103 GDGHVATEEASCEQECHACGNR 38
             G     + +  QE    G R
Sbjct: 290 QGGSAQGAQGAPSQERQGGGRR 311

>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
           kinase)
          Length = 1321

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = -2

Query: 235 GEELGVPDGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQGGDGHVATEEAS 71
           GE LG   G   +GSER   R Q         +  +E  G +   DG +  EE S
Sbjct: 779 GEVLGPRSGSSSEGSERSTDRSQEGAPSTLLADDQKESRGRASMADGDLEPEEGS 833

>VP40_HHV11 (P10210) Capsid protein P40 (Virion structural protein UL26)|
           [Contains: Capsid protein VP24 (EC 3.4.21.97)
           (Assemblin) (Protease); Capsid protein VP22A; UL26.5
           protein; C-terminal peptide]
          Length = 635

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
 Frame = +1

Query: 157 RARIDAEFA----VVHFRPGVVHPEPQVLHPDDC 246
           RAR  A +     V H+RP V  PEP   HP  C
Sbjct: 496 RARTSAPYGMYTPVAHYRPQVGEPEPTTTHPALC 529

>TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)|
          Length = 909

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
 Frame = -2

Query: 298 GGLDVGRVGGRHDAERPHSRRGEELGVPDGRHQDG-SERRRTRRQYALAGDARREA---L 131
           G L+ G  GG      PHSR G      +G  QDG S +  TR Q  +  +++      L
Sbjct: 199 GHLEEGASGGLLSPSTPHSRDGAARPKDEGSWQDGDSSQEITRLQGRMQAESQSPTNVDL 258

Query: 130 EEVAGGSQGGDGHVATEEASCEQECHACGNRHFCR 26
           E+     +G  G  +   A+  +   + G + + R
Sbjct: 259 EDKEREQRGWAGEFSLGVAAQSEAAFSPGRQDWSR 293

>VP6_BTV1S (Q03328) VP6 protein (Minor inner core protein VP6)|
          Length = 328

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = -2

Query: 283 GRVGGRHDAERPHSRRGEELGVPDGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQG 104
           G       AER    + EEL   +GR++  + R+R  ++   A   RR      +G S  
Sbjct: 35  GETNKESKAERKEGDKAEELKDGEGRNRRAARRKRAAKETKDARCDRRIHTAVGSGSSAK 94

Query: 103 GDGHVATE 80
           G G  A E
Sbjct: 95  GPGERANE 102

>ABA1_ASCSU (Q06811) ABA-1 polyprotein precursor (Body fluid allergen 1)|
            (Allergen Asc s 1) (Nematode polyprotein allergen ABA-1)
            (NPA ABA-1) [Contains: ABA-1B1 repeat unit; ABA-1A4
            repeat unit; ABA-1A3 repeat unit; ABA-1A2 repeat unit;
            ABA-1A1 repeat uni
          Length = 1365

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 214  DGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQGGDGHVATEEASCE 65
            DG+ +   E +       L GDA++EA E + GG +    HV  EE + E
Sbjct: 1228 DGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAE 1277



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 214  DGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQGGDGHVATEEASCE 65
            DG+ +   E +       L GDA++EA E + GG +    HV  EE + E
Sbjct: 1095 DGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAE 1144



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 214  DGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQGGDGHVATEEASCE 65
            DG+ +   E +       L GDA++EA E + GG +    HV  EE + E
Sbjct: 962  DGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAE 1011



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 214 DGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQGGDGHVATEEASCE 65
           DG+ +   E +       L GDA++EA E + GG +    HV  EE + E
Sbjct: 829 DGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAE 878



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 214 DGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQGGDGHVATEEASCE 65
           DG+ +   E +       L GDA++EA E + GG +    HV  EE + E
Sbjct: 696 DGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAE 745



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 214 DGRHQDGSERRRTRRQYALAGDARREALEEVAGGSQGGDGHVATEEASCE 65
           DG+ +   E +       L GDA++EA E + GG +    HV  EE + E
Sbjct: 563 DGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAE 612


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,870,606
Number of Sequences: 219361
Number of extensions: 1179652
Number of successful extensions: 5242
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5229
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)