>PVG3_SCHPO (Q9USX0) Beta-1,3-galactosyltransferase pvg3 (EC 2.4.1.134)|
           (Pyruvylated Gal-beta-1,3-epitope synthesis protein 3)
           (PvGal synthesis protein 3)
          Length = 378

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +2

Query: 257 ILVGVHTMPKKHSRRHLIRMAYALQQTAALRGAARVDVRFALCARPMPPEHAAFVALERR 436
           + +G+ +  K   RR+ +R  Y  +          VDVRF L   P   +  A +  E+R
Sbjct: 66  LYLGIFSQAKNVDRRNFLRTDYN-EYIKEFAVNDTVDVRFIL-GLPENEQELATIREEQR 123

Query: 437 AYGDVLLFNCTENAEDGKTYTYF 505
            YGD+ +    EN + GK+  YF
Sbjct: 124 TYGDLAVLPIPENVDAGKSIVYF 146

>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = -2

Query: 433 ALQRHERGV-----LGRHRPRAEREPDVYPRGAPERRRLLQR 323
           AL+R +R V      GRH PR  R P     GAP RR LL+R
Sbjct: 68  ALRRADRRVEHVPLRGRH-PRVRRVPQRDQDGAPRRRHLLRR 108

>ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
            (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1748

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 403  GRHRPRAEREPDVYPRGAPERRRLLQRVRHPDQVPP 296
            GR RP A+  P   P+ A  ++   Q  R  +QVPP
Sbjct: 1169 GRLRPEAQPHPSAGPKPAESKQYFEQYSRSYEQVPP 1204


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,108,995
Number of Sequences: 219361
Number of extensions: 696265
Number of successful extensions: 2043
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)