ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart35d07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 254 bits (128), Expect = 3e-64 Identities = 182/200 (91%) Strand = Plus / Minus Query: 252 tcagcatcctggtcggcgtgcacacgatgcccaagaagcactcccggcggcacctgatcc 311 |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| | | Sbjct: 4666152 tcagcatcctcgtcggcgtgcacacgatggccaagaagcactcgcggcggcacctggtgc 4666093 Query: 312 ggatggcgtacgcgctgcagcagacggcggcgctccggggcgccgcgcgggtagacgtcc 371 | |||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 4666092 gcatggcgtacgcggtgcagcagacggcggcgctccgcggcgcggcgcgcgtggacgtcc 4666033 Query: 372 ggttcgcgctctgcgcgcggccgatgccgcccgagcacgccgcgttcgtggcgctggagc 431 |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 4666032 ggttcgcgctgtgcgcgcggccgatgccgcaggagcaccgcgcgttcgtggcgctggagg 4665973 Query: 432 gccgcgcctacggcgacgtg 451 ||||||||||||||||||| Sbjct: 4665972 cccgcgcctacggcgacgtg 4665953 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gcagcgtcggcgtcggcgtcg 226 ||||||||||||||||||||| Sbjct: 10599659 gcagcgtcggcgtcggcgtcg 10599679 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tcgtcgccgccgtcgtgctc 48 |||||||||||||||||||| Sbjct: 24172004 tcgtcgccgccgtcgtgctc 24171985 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcgccgccgtcgtgctcgtc 51 |||||||||||||||||||| Sbjct: 9127795 tcgccgccgtcgtgctcgtc 9127814
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 254 bits (128), Expect = 3e-64 Identities = 182/200 (91%) Strand = Plus / Minus Query: 252 tcagcatcctggtcggcgtgcacacgatgcccaagaagcactcccggcggcacctgatcc 311 |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| | | Sbjct: 153516 tcagcatcctcgtcggcgtgcacacgatggccaagaagcactcgcggcggcacctggtgc 153457 Query: 312 ggatggcgtacgcgctgcagcagacggcggcgctccggggcgccgcgcgggtagacgtcc 371 | |||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 153456 gcatggcgtacgcggtgcagcagacggcggcgctccgcggcgcggcgcgcgtggacgtcc 153397 Query: 372 ggttcgcgctctgcgcgcggccgatgccgcccgagcacgccgcgttcgtggcgctggagc 431 |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 153396 ggttcgcgctgtgcgcgcggccgatgccgcaggagcaccgcgcgttcgtggcgctggagg 153337 Query: 432 gccgcgcctacggcgacgtg 451 ||||||||||||||||||| Sbjct: 153336 cccgcgcctacggcgacgtg 153317
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 254 bits (128), Expect = 3e-64 Identities = 182/200 (91%) Strand = Plus / Minus Query: 252 tcagcatcctggtcggcgtgcacacgatgcccaagaagcactcccggcggcacctgatcc 311 |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| | | Sbjct: 28751 tcagcatcctcgtcggcgtgcacacgatggccaagaagcactcgcggcggcacctggtgc 28692 Query: 312 ggatggcgtacgcgctgcagcagacggcggcgctccggggcgccgcgcgggtagacgtcc 371 | |||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 28691 gcatggcgtacgcggtgcagcagacggcggcgctccgcggcgcggcgcgcgtggacgtcc 28632 Query: 372 ggttcgcgctctgcgcgcggccgatgccgcccgagcacgccgcgttcgtggcgctggagc 431 |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 28631 ggttcgcgctgtgcgcgcggccgatgccgcaggagcaccgcgcgttcgtggcgctggagg 28572 Query: 432 gccgcgcctacggcgacgtg 451 ||||||||||||||||||| Sbjct: 28571 cccgcgcctacggcgacgtg 28552
>dbj|AK108798.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C05, full insert sequence Length = 1204 Score = 254 bits (128), Expect = 3e-64 Identities = 182/200 (91%) Strand = Plus / Plus Query: 252 tcagcatcctggtcggcgtgcacacgatgcccaagaagcactcccggcggcacctgatcc 311 |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| | | Sbjct: 318 tcagcatcctcgtcggcgtgcacacgatggccaagaagcactcgcggcggcacctggtgc 377 Query: 312 ggatggcgtacgcgctgcagcagacggcggcgctccggggcgccgcgcgggtagacgtcc 371 | |||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 378 gcatggcgtacgcggtgcagcagacggcggcgctccgcggcgcggcgcgcgtggacgtcc 437 Query: 372 ggttcgcgctctgcgcgcggccgatgccgcccgagcacgccgcgttcgtggcgctggagc 431 |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 438 ggttcgcgctgtgcgcgcggccgatgccgcaggagcaccgcgcgttcgtggcgctggagg 497 Query: 432 gccgcgcctacggcgacgtg 451 ||||||||||||||||||| Sbjct: 498 cccgcgcctacggcgacgtg 517
>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region Length = 106186 Score = 206 bits (104), Expect = 6e-50 Identities = 232/274 (84%), Gaps = 3/274 (1%) Strand = Plus / Minus Query: 258 tcctggtcggcgtgcacacgatgcccaagaagcactcccggcggcacctgatccggatgg 317 |||| |||||||||||||| |||||| |||||||||||||| ||||| ||||| |||| Sbjct: 72057 tcctcgtcggcgtgcacaccatgcccggcaagcactcccggcgccacctcatccgcatgg 71998 Query: 318 cgtacgcgctgcagcag---acggcggcgctccggggcgccgcgcgggtagacgtccggt 374 |||||||| |||||||| ||| | ||||| || | ||||||||| || |||||||| | Sbjct: 71997 cgtacgcgttgcagcagcagacgcccgcgctgcgcgccgccgcgcgcgtcgacgtccgct 71938 Query: 375 tcgcgctctgcgcgcggccgatgccgcccgagcacgccgcgttcgtggcgctggagcgcc 434 ||| |||||||||||| |||||||||||||||||| || |||||| ||||| ||| | Sbjct: 71937 tcgtgctctgcgcgcgcccgatgccgcccgagcaccgcgtgttcgttgcgctcgaggcgc 71878 Query: 435 gcgcctacggcgacgtgctgctcttcaactgcaccgagaacgccgaggacggcaagacgt 494 |||||||||||||||||||| || || ||||| |||||||||| ||||| || ||||||| Sbjct: 71877 gcgcctacggcgacgtgctggtcctcgactgcgccgagaacgcggaggaggggaagacgt 71818 Query: 495 acacctacttcgcggacctgccggccatgctcgg 528 |||| ||||||||| |||||| |||||||||| Sbjct: 71817 acacgtacttcgcgagcctgcccaccatgctcgg 71784
>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence Length = 203581 Score = 206 bits (104), Expect = 6e-50 Identities = 232/274 (84%), Gaps = 3/274 (1%) Strand = Plus / Minus Query: 258 tcctggtcggcgtgcacacgatgcccaagaagcactcccggcggcacctgatccggatgg 317 |||| |||||||||||||| |||||| |||||||||||||| ||||| ||||| |||| Sbjct: 56087 tcctcgtcggcgtgcacaccatgcccggcaagcactcccggcgccacctcatccgcatgg 56028 Query: 318 cgtacgcgctgcagcag---acggcggcgctccggggcgccgcgcgggtagacgtccggt 374 |||||||| |||||||| ||| | ||||| || | ||||||||| || |||||||| | Sbjct: 56027 cgtacgcgttgcagcagcagacgcccgcgctgcgcgccgccgcgcgcgtcgacgtccgct 55968 Query: 375 tcgcgctctgcgcgcggccgatgccgcccgagcacgccgcgttcgtggcgctggagcgcc 434 ||| |||||||||||| |||||||||||||||||| || |||||| ||||| ||| | Sbjct: 55967 tcgtgctctgcgcgcgcccgatgccgcccgagcaccgcgtgttcgttgcgctcgaggcgc 55908 Query: 435 gcgcctacggcgacgtgctgctcttcaactgcaccgagaacgccgaggacggcaagacgt 494 |||||||||||||||||||| || || ||||| |||||||||| ||||| || ||||||| Sbjct: 55907 gcgcctacggcgacgtgctggtcctcgactgcgccgagaacgcggaggaggggaagacgt 55848 Query: 495 acacctacttcgcggacctgccggccatgctcgg 528 |||| ||||||||| |||||| |||||||||| Sbjct: 55847 acacgtacttcgcgagcctgcccaccatgctcgg 55814
>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC Length = 226001 Score = 147 bits (74), Expect = 4e-32 Identities = 232/279 (83%), Gaps = 8/279 (2%) Strand = Plus / Minus Query: 258 tcctggtcggcgtgcacacgatgcccaagaagcactcccgg-cggcacctgatccggatg 316 |||| |||||||||||||| |||||| |||||||||||| || ||||| ||||| ||| Sbjct: 129109 tcctcgtcggcgtgcacaccatgcccggcaagcactcccgggcgccacctcatccgcatg 129050 Query: 317 gcg-tacgcgct----gcagcagacggcggcgctccggggcgccgcgcgggtagacgtcc 371 ||| |||||| | |||||||||| | ||||| || | ||||||||| || ||||||| Sbjct: 129049 gcggtacgcggttgcagcagcagacgcccgcgctgcgcgccgccgcgcgcgtcgacgtcc 128990 Query: 372 ggttcgcgctctgcgcgcggccgatgccgcccg-agcacgccgcgttcgtggcgctggag 430 | |||| |||||||||||| ||||||||||||| ||||| || |||||| ||||| ||| Sbjct: 128989 gcttcgtgctctgcgcgcgcccgatgccgcccgaagcaccgcgtgttcgttgcgctcgag 128930 Query: 431 cgccgcgcctacggcgacgtgc-tgctcttcaactgcaccgagaacgccgaggacggcaa 489 ||||||||||||||||||| || || || ||||| |||||||||| ||||| || || Sbjct: 128929 gcgcgcgcctacggcgacgtgcttggtcctcgactgcgccgagaacgcggaggaggggaa 128870 Query: 490 gacgtacacctacttcgcggacctgccggccatgctcgg 528 ||||||||| ||||||||| |||||| |||||||||| Sbjct: 128869 gacgtacacgtacttcgcgagcctgcccaccatgctcgg 128831
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 296 cggcggcacctgatccggatggcgtacgcgctgcagcagacggcgg 341 |||||||||||| ||||||||| |||||| || |||||| |||||| Sbjct: 15860137 cggcggcacctgctccggatggtgtacgccctccagcagccggcgg 15860092 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 210 cgtcggcgtcggcgtcgttggtggcgg 236 ||||||||||||||||| ||||||||| Sbjct: 8634944 cgtcggcgtcggcgtcggtggtggcgg 8634918 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 315 tggcgtacgcgctgcagcagacggcggcgc 344 |||||||||||||||||| | ||||||||| Sbjct: 15842976 tggcgtacgcgctgcagccggcggcggcgc 15842947 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 9458986 gcgtcggcgtcggcgtcgtt 9459005
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 296 cggcggcacctgatccggatggcgtacgcgctgcagcagacggcgg 341 |||||||||||| ||||||||| |||||| || |||||| |||||| Sbjct: 23263 cggcggcacctgctccggatggtgtacgccctccagcagccggcgg 23218 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 315 tggcgtacgcgctgcagcagacggcggcgc 344 |||||||||||||||||| | ||||||||| Sbjct: 6102 tggcgtacgcgctgcagccggcggcggcgc 6073
>ref|XM_483219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 200 cagccagcagcgtcggcgtcggcgtcgttggtggcg 235 |||||||| |||||||| ||||||||||||||||| Sbjct: 380 cagccagcggcgtcggcagcggcgtcgttggtggcg 345
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 200 cagccagcagcgtcggcgtcggcgtcgttggtggcg 235 |||||||| |||||||| ||||||||||||||||| Sbjct: 24872232 cagccagcggcgtcggcagcggcgtcgttggtggcg 24872267
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 200 cagccagcagcgtcggcgtcggcgtcgttggtggcg 235 |||||||| |||||||| ||||||||||||||||| Sbjct: 76678 cagccagcggcgtcggcagcggcgtcgttggtggcg 76713
>ref|XM_468154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 483 acggcaagacgtacacctacttc 505 ||||||||||||||||||||||| Sbjct: 392 acggcaagacgtacacctacttc 414
>ref|XM_364083.1| Magnaporthe grisea 70-15 hypothetical protein (MG08928.4) partial mRNA Length = 861 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 325 gctgcagcagacggcggcgctccgggg 351 |||||||||||||||||||||| |||| Sbjct: 213 gctgcagcagacggcggcgctctgggg 239
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 483 acggcaagacgtacacctacttc 505 ||||||||||||||||||||||| Sbjct: 33365359 acggcaagacgtacacctacttc 33365337 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgccgccgtcgtgctcgtcg 52 |||||||||||||||||||| Sbjct: 22253577 cgccgccgtcgtgctcgtcg 22253596
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 401 cccgagcacgccgcgttcgtggc 423 ||||||||||||||||||||||| Sbjct: 3980518 cccgagcacgccgcgttcgtggc 3980496
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 210 cgtcggcgtcggcgtcgttggtggcgg 236 ||||||||||||||||| ||||||||| Sbjct: 64740 cgtcggcgtcggcgtcggtggtggcgg 64714
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 483 acggcaagacgtacacctacttc 505 ||||||||||||||||||||||| Sbjct: 106109 acggcaagacgtacacctacttc 106087
>emb|AJ276313.1|DHY276313 Drosophila hydei E(spl)region transcript mdelta and E(spl)region transcript mgamma genes for HLHmdelta and HLHmgamma proteins Length = 6442 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 204 cagcagcgtcggcgtcggcgtcg 226 ||||||||||||||||||||||| Sbjct: 2816 cagcagcgtcggcgtcggcgtcg 2794
>dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic gene cluster Length = 21391 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 401 cccgagcacgccgcgttcgtggc 423 ||||||||||||||||||||||| Sbjct: 15674 cccgagcacgccgcgttcgtggc 15696
>gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosome 9, complete sequence Length = 204098 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tcctcctcctcaccctgctctg 111 |||||||||||||||||||||| Sbjct: 131349 tcctcctcctcaccctgctctg 131328
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 cgcgctgcagcagacggcggcg 343 |||||||||||||||||||||| Sbjct: 3052081 cgcgctgcagcagacggcggcg 3052102
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 gtcgtcgccgccgtcgtgctcgtcgt 53 ||||||||||||||||| |||||||| Sbjct: 75377 gtcgtcgccgccgtcgtcctcgtcgt 75352
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 cgcgctgcagcagacggcggcg 343 |||||||||||||||||||||| Sbjct: 1230855 cgcgctgcagcagacggcggcg 1230876
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 cgcgctgcagcagacggcggcg 343 |||||||||||||||||||||| Sbjct: 1404285 cgcgctgcagcagacggcggcg 1404264
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 28 gtcgtcgccgccgtcgtgctcgtcgt 53 ||||||||||||||||| |||||||| Sbjct: 22265921 gtcgtcgccgccgtcgtcctcgtcgt 22265946 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 cagcagcgtcggcgtcggcgt 224 ||||||||||||||||||||| Sbjct: 13380782 cagcagcgtcggcgtcggcgt 13380762
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 526 cgggggcgccggcggcggctca 547 |||||||||||||||||||||| Sbjct: 50502 cgggggcgccggcggcggctca 50481
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 315 tggcgtacgcgctgcagcagacggcggcgc 344 |||||||||||||||||| | ||||||||| Sbjct: 128162 tggcgtacgcgctgcagccggcggcggcgc 128133
>dbj|AK069858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035N15, full insert sequence Length = 1074 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 tggcgtacgcgctgcagcagacggcggcgc 344 |||||||||||||||||| | ||||||||| Sbjct: 323 tggcgtacgcgctgcagccggcggcggcgc 352
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 442 cggcgacgtgctgctcttcaactgca 467 ||||||||||||||||||| |||||| Sbjct: 259125 cggcgacgtgctgctcttccactgca 259150
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 cgcgctgcagcagacggcggcg 343 |||||||||||||||||||||| Sbjct: 1730434 cgcgctgcagcagacggcggcg 1730413 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cgcgcggccgatgccgcccg 404 |||||||||||||||||||| Sbjct: 2021014 cgcgcggccgatgccgcccg 2021033 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 2004790 gcgtcggcgtcggcgtcgtt 2004809
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 28 gtcgtcgccgccgtcgtgctcgtcgt 53 ||||||||||||||||| |||||||| Sbjct: 22575832 gtcgtcgccgccgtcgtcctcgtcgt 22575857 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 cagcagcgtcggcgtcggcgt 224 ||||||||||||||||||||| Sbjct: 13460961 cagcagcgtcggcgtcggcgt 13460941
>ref|XM_473541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cgtcgccgccgtcgtgctcgt 50 ||||||||||||||||||||| Sbjct: 126 cgtcgccgccgtcgtgctcgt 146
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 cgccgtcgtgctcgtcgtacc 56 ||||||||||||||||||||| Sbjct: 1453461 cgccgtcgtgctcgtcgtacc 1453441
>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03 map S20262S, complete sequence Length = 149553 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 cagcagcgtcggcgtcggcgt 224 ||||||||||||||||||||| Sbjct: 97135 cagcagcgtcggcgtcggcgt 97115
>ref|XM_370155.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06652.4) partial mRNA Length = 2127 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 actcgtcctcctcctcaccct 105 ||||||||||||||||||||| Sbjct: 808 actcgtcctcctcctcaccct 788
>emb|AL359832.33| Human DNA sequence from clone RP11-790G19 on chromosome 10 Contains the 5' end of the gene for transmembrane receptor Unc5H2 (UNC5H2),the 3'end of a novel gene and two CpG islands, complete sequence Length = 195130 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gtcctcctcctcaccctgctc 109 ||||||||||||||||||||| Sbjct: 115254 gtcctcctcctcaccctgctc 115274
>gb|U00046.1| Caenorhabditis elegans cosmid R13F6, complete sequence Length = 35396 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 gtcgtcgccgccgtcgtgctc 48 ||||||||||||||||||||| Sbjct: 825 gtcgtcgccgccgtcgtgctc 845
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgtcgccgccgtcgtgctcgt 50 ||||||||||||||||||||| Sbjct: 59405 cgtcgccgccgtcgtgctcgt 59385
>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete sequence Length = 202786 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 caccctgctctgcatcaccttcccc 124 |||||||||||||| |||||||||| Sbjct: 153024 caccctgctctgcagcaccttcccc 153000
>gb|AE005778.1| Caulobacter crescentus CB15 section 104 of 359 of the complete genome Length = 11015 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 cgccgcgttcgtggcgctggagcgc 433 |||||||||||| |||||||||||| Sbjct: 3757 cgccgcgttcgtcgcgctggagcgc 3733
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 tcgtcgccgccgtcgtgctcgtcgt 53 ||||||||||||||| ||||||||| Sbjct: 177859 tcgtcgccgccgtcgagctcgtcgt 177835
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 27 tgtcgtcgccgccgtcgtgctcgtcgtac 55 ||||||||||||||||| | ||||||||| Sbjct: 133816 tgtcgtcgccgccgtcgaggtcgtcgtac 133788 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gtcggcgtcggcgtcgttgg 230 |||||||||||||||||||| Sbjct: 1475476 gtcggcgtcggcgtcgttgg 1475495 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 gtcgtcgccgccgtcgtgctcgtc 51 |||||||||| ||||||||||||| Sbjct: 1406248 gtcgtcgccgtcgtcgtgctcgtc 1406271
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgtcgccgccgtcgtgctcgt 50 ||||||||||||||||||||| Sbjct: 28568615 cgtcgccgccgtcgtgctcgt 28568595 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcgccgccgtcgtgctcgtc 51 |||||||||||||||||||| Sbjct: 5634051 tcgccgccgtcgtgctcgtc 5634070 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 cagccagcagcgtcggcgtcggcgtcgt 227 ||||| || ||||||||||||||||||| Sbjct: 1754830 cagccggcggcgtcggcgtcggcgtcgt 1754857
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 431 cgccgcgcctacggcgacgtgctgc 455 |||||||||||||||| |||||||| Sbjct: 1343513 cgccgcgcctacggcggcgtgctgc 1343537
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gcagcgtcggcgtcggcgtcg 226 ||||||||||||||||||||| Sbjct: 136366 gcagcgtcggcgtcggcgtcg 136386
>emb|Y11368.1|ZMCYTP450 Z.mays cyp71c4 gene Length = 7466 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gcagcgtcggcgtcggcgtcg 226 ||||||||||||||||||||| Sbjct: 3033 gcagcgtcggcgtcggcgtcg 3053
>emb|X81831.1|ZMCYP71C4 Z.mays CYP71C4 mRNA for cytochrome P-450 Length = 1878 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gcagcgtcggcgtcggcgtcg 226 ||||||||||||||||||||| Sbjct: 265 gcagcgtcggcgtcggcgtcg 285
>dbj|AK070267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044P07, full insert sequence Length = 1309 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 cgtcgccgccgtcgtgctcgt 50 ||||||||||||||||||||| Sbjct: 75 cgtcgccgccgtcgtgctcgt 95
>gb|AY111773.1| Zea mays CL1575_1 mRNA sequence Length = 1963 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gcagcgtcggcgtcggcgtcg 226 ||||||||||||||||||||| Sbjct: 265 gcagcgtcggcgtcggcgtcg 285
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4, cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ), MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY (mmcY) genes, complete cds; and unknown genes Length = 63734 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 gccgcgttcgtggcgctggag 430 ||||||||||||||||||||| Sbjct: 22586 gccgcgttcgtggcgctggag 22566
>gb|U50973.1|SSU50973 Streptomyces sp. daunomycin C-14 hydroxylase (doxA), gene, complete cds, and (dauI) gene, partial cds Length = 3196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gcgtcggcgtcgttggtggcg 235 ||||||||||||||||||||| Sbjct: 957 gcgtcggcgtcgttggtggcg 937
>ref|XM_474689.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 555 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcgccgccgtcgtgctcgtc 51 |||||||||||||||||||| Sbjct: 32 tcgccgccgtcgtgctcgtc 51
>ref|XM_471134.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 200 cagccagcagcgtcggcgtcggcgtcgt 227 ||||| || ||||||||||||||||||| Sbjct: 749 cagccggcggcgtcggcgtcggcgtcgt 722
>ref|XM_466414.1| Oryza sativa (japonica cultivar-group), mRNA Length = 606 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgccgccgtcgtgctcgtcg 52 |||||||||||||||||||| Sbjct: 543 cgccgccgtcgtgctcgtcg 562
>ref|XM_450526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1281 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 767 gcgtcggcgtcggcgtcgtt 748
>ref|XM_517899.1| PREDICTED: Pan troglodytes similar to expressed sequence AU016693 (LOC462026), mRNA Length = 1093 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cgcgctgcagcagacggcgg 341 |||||||||||||||||||| Sbjct: 162 cgcgctgcagcagacggcgg 181
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 gtcgtcgccgccgtcgtgctcgtc 51 |||||||||||||||| ||||||| Sbjct: 2170862 gtcgtcgccgccgtcgcgctcgtc 2170885
>ref|XM_470487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 93 cagcgtcggcgtcggcgtcg 74
>gb|U72729.1|AH007024S2 Oryza longistaminata receptor-like kinase protein (Xa21) gene, family member F, 3' flanking sequence Length = 1332 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 caatgtcgtcgccgccgtcg 43 |||||||||||||||||||| Sbjct: 1199 caatgtcgtcgccgccgtcg 1180
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 gcgcgcggccgatgccgccc 403 |||||||||||||||||||| Sbjct: 2128656 gcgcgcggccgatgccgccc 2128675
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 1833813 cagcgtcggcgtcggcgtcg 1833794
>ref|XM_363194.1| Magnaporthe grisea 70-15 hypothetical protein (MG08778.4) partial cds Length = 870 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 426 tggagcgccgcgcctacggcgacgtgct 453 |||||||||||||| ||||||| ||||| Sbjct: 464 tggagcgccgcgccgacggcgaggtgct 437
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07, complete sequence Length = 156163 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 gctcgggggcgccggcggcggctc 546 ||||||||||| |||||||||||| Sbjct: 31510 gctcgggggcggcggcggcggctc 31487
>ref|XM_652844.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0332.2), mRNA Length = 1572 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ctgcaccgagaacgccgaggacggcaag 490 |||||||||||| |||||||| |||||| Sbjct: 1239 ctgcaccgagaaggccgaggatggcaag 1266
>ref|NM_152445.1| Homo sapiens chromosome 14 open reading frame 44 (C14orf44), mRNA Length = 2304 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 gtggcactcgtcctcctcctcaccctgc 107 |||||||||| |||| |||||||||||| Sbjct: 745 gtggcactcggcctcttcctcaccctgc 718
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 35885615 cagcgtcggcgtcggcgtcg 35885596
>gb|BC040527.1| Homo sapiens coiled-coil domain containing 100, mRNA (cDNA clone MGC:39578 IMAGE:4837992), complete cds Length = 3984 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cgcgctgcagcagacggcgg 341 |||||||||||||||||||| Sbjct: 182 cgcgctgcagcagacggcgg 201
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 cgtcgccgccgtcgtgctcgtcgt 53 |||||||||||||| ||||||||| Sbjct: 1753128 cgtcgccgccgtcgagctcgtcgt 1753105
>emb|BX044377.1|CNS096EL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC17DH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 249 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 tggcggacgacgggggtcagctca 254 ||||||||||||| |||||||||| Sbjct: 249 tggcggacgacggcggtcagctca 226
>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete sequence Length = 149449 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 cagccagcagcgtcggcgtcggcgtcgt 227 ||||| || ||||||||||||||||||| Sbjct: 97782 cagccggcggcgtcggcgtcggcgtcgt 97809
>gb|BC053909.1| Homo sapiens chromosome 14 open reading frame 44, mRNA (cDNA clone MGC:61766 IMAGE:6501484), complete cds Length = 2273 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 gtggcactcgtcctcctcctcaccctgc 107 |||||||||| |||| |||||||||||| Sbjct: 699 gtggcactcggcctcttcctcaccctgc 672
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 cagccagcagcgtcggcgtcggcgtcgt 227 ||||| || ||||||||||||||||||| Sbjct: 50097 cagccggcggcgtcggcgtcggcgtcgt 50124
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cgtcggcgtcgttggtggcg 235 |||||||||||||||||||| Sbjct: 595230 cgtcggcgtcgttggtggcg 595249
>gb|AC068512.9| Homo sapiens chromosome 17, clone RP11-453A12, complete sequence Length = 53366 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 tcgtcctcctcctcaccctgctctgcat 114 ||||||||||||||| ||||||| |||| Sbjct: 15940 tcgtcctcctcctcagcctgctcagcat 15967
>dbj|AK056259.1| Homo sapiens cDNA FLJ31697 fis, clone NT2RI2005851, weakly similar to PLECTIN Length = 2304 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 gtggcactcgtcctcctcctcaccctgc 107 |||||||||| |||| |||||||||||| Sbjct: 745 gtggcactcggcctcttcctcaccctgc 718
>gb|AC106792.2| Homo sapiens chromosome 5 clone RP11-403M22, complete sequence Length = 84297 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cgcgctgcagcagacggcgg 341 |||||||||||||||||||| Sbjct: 14491 cgcgctgcagcagacggcgg 14472
>gb|AC096317.6| Rattus norvegicus 1 BAC CH230-148F9 (Children's Hospital Oakland Research Institute) complete sequence Length = 211459 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcaccctgctctgc 112 |||||||||||||||||||| Sbjct: 128663 tcctcctcaccctgctctgc 128644
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 75510 cagcgtcggcgtcggcgtcg 75529
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gcagcgtcggcgtcggcgtc 225 |||||||||||||||||||| Sbjct: 937734 gcagcgtcggcgtcggcgtc 937753
>gb|AC158666.3| Mus musculus 6 BAC RP23-11A20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188927 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cctcctcaccctgctctgca 113 |||||||||||||||||||| Sbjct: 85685 cctcctcaccctgctctgca 85704
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 gctcgggggcgccggcggcggctc 546 ||||||||||| |||||||||||| Sbjct: 18391673 gctcgggggcggcggcggcggctc 18391650
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 35975745 cagcgtcggcgtcggcgtcg 35975726
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 33803322 gcgtcggcgtcggcgtcgtt 33803341
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cgccgcgttcgtggcgctgg 428 |||||||||||||||||||| Sbjct: 2096539 cgccgcgttcgtggcgctgg 2096520
>dbj|AB086653.1| Streptomyces halstedii vicenistatin biosynthetic gene cluster (vinR1, vinA, vinB, vinC, vinP2, vinP3, vinP4, vinG, vinF, vinD, vinE, vinH, vinI, vinJ, vinK, vinL, vinM, vinN, vinO, vinP1), partial and complete cds Length = 64492 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 30034 gcgtcggcgtcggcgtcgtt 30015
>gb|AC005480.3|AC005480 Homo sapiens PAC clone RP4-592G7 from 14q24.3, complete sequence Length = 94308 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 gtggcactcgtcctcctcctcaccctgc 107 |||||||||| |||| |||||||||||| Sbjct: 64726 gtggcactcggcctcttcctcaccctgc 64699
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggcggcgctccggggcgccgcgc 359 ||||||||||||| |||||||||| Sbjct: 2723424 cggcggcgctccgcggcgccgcgc 2723401
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167311 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tcctcctcctcaccctgctc 109 |||||||||||||||||||| Sbjct: 155558 tcctcctcctcaccctgctc 155539
>gb|DQ317423.1| Leersia virginica KNOTTED1-like homeodomain protein mRNA, partial cds Length = 1080 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 286 gcgtcggcgtcggcgtcgtt 305
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgccgccgtcgtgctcgtcg 52 |||||||||||||||||||| Sbjct: 12221 cgccgccgtcgtgctcgtcg 12240
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgtcctcctcctcaccctg 106 |||||||||||||||||||| Sbjct: 368571 tcgtcctcctcctcaccctg 368590
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ctgcgcgcggccgatgccgc 401 |||||||||||||||||||| Sbjct: 5596594 ctgcgcgcggccgatgccgc 5596613 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgtcggcgtcgttggtggcg 235 |||||||||||||||||||| Sbjct: 5512765 cgtcggcgtcgttggtggcg 5512746
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcgccgccgtcgtgctcgtc 51 |||||||||||||||||||| Sbjct: 21817 tcgccgccgtcgtgctcgtc 21836
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 42369 gcgtcggcgtcggcgtcgtt 42388
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcgccgccgtcgtgctcgtc 51 |||||||||||||||||||| Sbjct: 175113 tcgccgccgtcgtgctcgtc 175132
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgccgccgtcgtgctcgtcg 52 |||||||||||||||||||| Sbjct: 149421 cgccgccgtcgtgctcgtcg 149440
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tcgtcgccgccgtcgtgctc 48 |||||||||||||||||||| Sbjct: 2093 tcgtcgccgccgtcgtgctc 2074
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tcgtcgccgccgtcgtgctc 48 |||||||||||||||||||| Sbjct: 105462 tcgtcgccgccgtcgtgctc 105443
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgtcggcgtcggcgtcgtt 228 |||||||||||||||||||| Sbjct: 22622 gcgtcggcgtcggcgtcgtt 22641
>emb|AJ336369.1|HSA336369 Homo sapiens genomic sequence surrounding NotI site, clone NL6-IA11R Length = 405 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cgcgctgcagcagacggcgg 341 |||||||||||||||||||| Sbjct: 163 cgcgctgcagcagacggcgg 182
>emb|AJ336007.1|HSA336007 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KD9R Length = 746 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cgcgctgcagcagacggcgg 341 |||||||||||||||||||| Sbjct: 163 cgcgctgcagcagacggcgg 182
>gb|AF065159.3|AF065159 Bradyrhizobium japonicum putative arylsulfatase (arsA), putative soluble lytic transglycosylase precursor (sltA), dihydrodipicolinate synthase (dapA), MscL (mscL), SmpB (smpB), BcpB (bcpB), RnpO (rnpO), RelA/SpoT homolog (relA), PdxJ (pdxJ), and acyl carrier protein synthase AcpS (acpS) genes, complete cds; prokaryotic type I signal peptidase SipF (sipF) gene, sipF-sipS allele, complete cds; RNase III (rnc), GTP-binding protein Era (era), hypothetical protein, recO-like protein, topoisomerase II (gyrA), putative ABC transporter, putative GMC-oxidoreductase, hypothetical protein, putative cytochrome C binding protein (cyc4), putative polytopic integral membrane protein, superoxide dismutase SodM-like protein, putative inner membrane protein, AttM-like protein (attM), adenylate cyclases-like protein, and putative inner membrane protein (spcT) genes, complete cds; and unknown genes Length = 35209 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ctgcgcgcggccgatgccgc 401 |||||||||||||||||||| Sbjct: 33792 ctgcgcgcggccgatgccgc 33773
>dbj|AK100733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117O12, full insert sequence Length = 1119 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 242 cagcgtcggcgtcggcgtcg 223
>dbj|AK100045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153N14, full insert sequence Length = 2193 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcgccgccgtcgtgctcgtc 51 |||||||||||||||||||| Sbjct: 57 tcgccgccgtcgtgctcgtc 76
>dbj|AK073403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042F02, full insert sequence Length = 2138 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcgtcgccgccgtcgtgctc 48 |||||||||||||||||||| Sbjct: 1799 tcgtcgccgccgtcgtgctc 1818
>gb|AC155945.4| Mus musculus 6 BAC RP24-466A6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162561 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cctcctcaccctgctctgca 113 |||||||||||||||||||| Sbjct: 11783 cctcctcaccctgctctgca 11764
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 ccgaggacggcaagacgtacacct 500 |||| ||||||||||||||||||| Sbjct: 1113588 ccgacgacggcaagacgtacacct 1113565
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caacccaagttcgagcaatg 28 |||||||||||||||||||| Sbjct: 79474 caacccaagttcgagcaatg 79493
>dbj|AK061073.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D05, full insert sequence Length = 1106 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 243 cagcgtcggcgtcggcgtcg 224
>emb|X89714.1|AARHA1 A.aculeatus mRNA for rhamnogalacturonan acetylestease Length = 936 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcaccttccccgcctacctg 133 |||||||||||||||||||| Sbjct: 412 tcaccttccccgcctacctg 431
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caacccaagttcgagcaatg 28 |||||||||||||||||||| Sbjct: 296797 caacccaagttcgagcaatg 296816
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caacccaagttcgagcaatg 28 |||||||||||||||||||| Sbjct: 291895 caacccaagttcgagcaatg 291914
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 tcctcctcctcaccctgctctgca 113 |||||||||||| ||||||||||| Sbjct: 105254 tcctcctcctcaacctgctctgca 105231
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 cgctggagcgccgcgcctac 442 |||||||||||||||||||| Sbjct: 176824 cgctggagcgccgcgcctac 176843
>gb|AC106334.8| Rattus norvegicus BAC CH230-185M3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 206745 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcctcctcaccctgctctgc 112 |||||||||||||||||||| Sbjct: 174666 tcctcctcaccctgctctgc 174685
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcgccgccgtcgtgctcgtc 51 |||||||||||||||||||| Sbjct: 91258 tcgccgccgtcgtgctcgtc 91277
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgtcctcctcctcaccctg 106 |||||||||||||||||||| Sbjct: 17670 tcgtcctcctcctcaccctg 17689
>emb|CT009697.13| Mouse DNA sequence from clone RP23-131H5 on chromosome 13, complete sequence Length = 225802 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tcctcctcctcaccctgctc 109 |||||||||||||||||||| Sbjct: 95038 tcctcctcctcaccctgctc 95019
>emb|CR538726.12| Zebrafish DNA sequence from clone CH211-197C20 in linkage group 15, complete sequence Length = 190731 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gtccggttcgcgctctgcgc 387 |||||||||||||||||||| Sbjct: 170829 gtccggttcgcgctctgcgc 170848
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccagcagcgtcggcgtcggcgtcg 226 |||||||| ||||||||||||||| Sbjct: 2094089 ccagcagcttcggcgtcggcgtcg 2094112
>gb|L14321.1|HSBBICP4B Bovine herpesvirus type 1 immedidate-early transcriptional control protein (BICP4) gene, 5' end Length = 2764 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagcgtcggcgtcggcgtcg 226 |||||||||||||||||||| Sbjct: 1274 cagcgtcggcgtcggcgtcg 1255 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,754,216 Number of Sequences: 3902068 Number of extensions: 3754216 Number of successful extensions: 103783 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96254 Number of HSP's gapped (non-prelim): 7518 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
