ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart35d06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 99 acgaccgccgccaggagctccaggcgttcgacgacaccaaggccggcgtcaagggcctcg 158 ||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 13637 acgaccgcctccgcgagctcaaggccttcgacgacaccaaggccggcgtcaagggcctcg 13696 Query: 159 tcgacgccggggtcaccaccgtcccgcccatcttccaccaccctcccgac 208 |||||||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 13697 tcgacgccggcgtcaccgccgtcccgcgcatcttccaccaccctcccgac 13746 Score = 137 bits (69), Expect = 5e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 446 aggttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctc 505 ||||||||||||||||||||||| ||| |||| ||||| ||||| ||||||||||| ||| Sbjct: 14011 aggttcaactccaacttcgacctgttcgagtcccccgccgccaactggcgcgacacgctc 14070 Query: 506 ttctgccaggcgttcccggacccgccggagctggaggagctccccgccgccgtgcgggac 565 |||||||||||| ||||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 14071 ttctgccaggcggcgccggacccgccggcgccggaggagctccccgccgacgtgaggggc 14130 Query: 566 gtcctgctggagt 578 || |||| ||||| Sbjct: 14131 gtgctgccggagt 14143 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 275 gtggtcggccaggtgcgggcggcggccgagacggtgggcttcttccaggtggtcagccac 334 ||||||| ||||||| || ||||||| ||| |||||||||||||||||||||||| |||| Sbjct: 13837 gtggtcgcccaggtgaggtcggcggcggagtcggtgggcttcttccaggtggtcaaccac 13896 Query: 335 ggcgtacgggccggcctcctcgccgagatgctcgcgtccgtgcggcggttccacgag 391 ||||| | ||| ||||| | || |||||||||| | |||||||||||| ||||| Sbjct: 13897 ggcgtgccggcgcgcctcacggacgggatgctcgcggcggtgcggcggttcaacgag 13953 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 ccatcccggtcatcgacctc 256 |||||||||||||||||||| Sbjct: 13790 ccatcccggtcatcgacctc 13809
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 99 acgaccgccgccaggagctccaggcgttcgacgacaccaaggccggcgtcaagggcctcg 158 ||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 27290758 acgaccgcctccgcgagctcaaggccttcgacgacaccaaggccggcgtcaagggcctcg 27290699 Query: 159 tcgacgccggggtcaccaccgtcccgcccatcttccaccaccctcccgac 208 |||||||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 27290698 tcgacgccggcgtcaccgccgtcccgcgcatcttccaccaccctcccgac 27290649 Score = 137 bits (69), Expect = 5e-29 Identities = 117/133 (87%) Strand = Plus / Minus Query: 446 aggttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctc 505 ||||||||||||||||||||||| ||| |||| ||||| ||||| ||||||||||| ||| Sbjct: 27290384 aggttcaactccaacttcgacctgttcgagtcccccgccgccaactggcgcgacacgctc 27290325 Query: 506 ttctgccaggcgttcccggacccgccggagctggaggagctccccgccgccgtgcgggac 565 |||||||||||| ||||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 27290324 ttctgccaggcggcgccggacccgccggcgccggaggagctccccgccgacgtgaggggc 27290265 Query: 566 gtcctgctggagt 578 || |||| ||||| Sbjct: 27290264 gtgctgccggagt 27290252 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 36014566 ctccaggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcaca 36014625 Query: 176 accgtcccgcccatcttccaccacc 200 ||| |||| ||||||||||||||| Sbjct: 36014626 accatccccgccatcttccaccacc 36014650 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Minus Query: 275 gtggtcggccaggtgcgggcggcggccgagacggtgggcttcttccaggtggtcagccac 334 ||||||| ||||||| || ||||||| ||| |||||||||||||||||||||||| |||| Sbjct: 27290558 gtggtcgcccaggtgaggtcggcggcggagtcggtgggcttcttccaggtggtcaaccac 27290499 Query: 335 ggcgtacgggccggcctcctcgccgagatgctcgcgtccgtgcggcggttccacgag 391 ||||| | ||| ||||| | || |||||||||| | |||||||||||| ||||| Sbjct: 27290498 ggcgtgccggcgcgcctcacggacgggatgctcgcggcggtgcggcggttcaacgag 27290442 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 448 gttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 |||||||||||| |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 36014907 gttcaactccaatttcgacctgttccagtcgccggccgccaactggcgtgacac 36014960 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 catcccggtcatcgacctctc 258 ||||||||||||||||||||| Sbjct: 23259565 catcccggtcatcgacctctc 23259545 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaaga 410 |||||||| ||| | |||||||||||| ||||| |||||| |||| ||||| Sbjct: 36014818 gagatgctggcggcggtgcggcggttcaacgagcagccggcggagggcaaga 36014869 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ccatcccggtcatcgacctc 256 |||||||||||||||||||| Sbjct: 27290605 ccatcccggtcatcgacctc 27290586
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 99 acgaccgccgccaggagctccaggcgttcgacgacaccaaggccggcgtcaagggcctcg 158 ||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 27382081 acgaccgcctccgcgagctcaaggccttcgacgacaccaaggccggcgtcaagggcctcg 27382022 Query: 159 tcgacgccggggtcaccaccgtcccgcccatcttccaccaccctcccgac 208 |||||||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 27382021 tcgacgccggcgtcaccgccgtcccgcgcatcttccaccaccctcccgac 27381972 Score = 137 bits (69), Expect = 5e-29 Identities = 117/133 (87%) Strand = Plus / Minus Query: 446 aggttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctc 505 ||||||||||||||||||||||| ||| |||| ||||| ||||| ||||||||||| ||| Sbjct: 27381707 aggttcaactccaacttcgacctgttcgagtcccccgccgccaactggcgcgacacgctc 27381648 Query: 506 ttctgccaggcgttcccggacccgccggagctggaggagctccccgccgccgtgcgggac 565 |||||||||||| ||||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 27381647 ttctgccaggcggcgccggacccgccggcgccggaggagctccccgccgacgtgaggggc 27381588 Query: 566 gtcctgctggagt 578 || |||| ||||| Sbjct: 27381587 gtgctgccggagt 27381575 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 36104640 ctccaggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcaca 36104699 Query: 176 accgtcccgcccatcttccaccacc 200 ||| |||| ||||||||||||||| Sbjct: 36104700 accatccccgccatcttccaccacc 36104724 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Minus Query: 275 gtggtcggccaggtgcgggcggcggccgagacggtgggcttcttccaggtggtcagccac 334 ||||||| ||||||| || ||||||| ||| |||||||||||||||||||||||| |||| Sbjct: 27381881 gtggtcgcccaggtgaggtcggcggcggagtcggtgggcttcttccaggtggtcaaccac 27381822 Query: 335 ggcgtacgggccggcctcctcgccgagatgctcgcgtccgtgcggcggttccacgag 391 ||||| | ||| ||||| | || |||||||||| | |||||||||||| ||||| Sbjct: 27381821 ggcgtgccggcgcgcctcacggacgggatgctcgcggcggtgcggcggttcaacgag 27381765 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 448 gttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 |||||||||||| |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 36104981 gttcaactccaatttcgacctgttccagtcgccggccgccaactggcgtgacac 36105034 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 catcccggtcatcgacctctc 258 ||||||||||||||||||||| Sbjct: 23252593 catcccggtcatcgacctctc 23252573 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaaga 410 |||||||| ||| | |||||||||||| ||||| |||||| |||| ||||| Sbjct: 36104892 gagatgctggcggcggtgcggcggttcaacgagcagccggcggagggcaaga 36104943 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ccatcccggtcatcgacctc 256 |||||||||||||||||||| Sbjct: 27381928 ccatcccggtcatcgacctc 27381909
>ref|XM_482200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1131 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 96 Query: 176 accgtccc 183 |||||||| Sbjct: 97 accgtccc 104 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 358 cgagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgta 417 ||||||||||||| | |||||||| ||| ||||| ||| ||||| ||| ||| || Sbjct: 297 cgagatgctcgcggcggtgcggcgcttcaacgaggagcccctggaggcgaaggtgcccta 356 Query: 418 ctacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccagtc 477 ||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||| || Sbjct: 357 ctacaccagggacgtcgccagcaaggtccggttcaactccaacttcgacctcttccgttc 416 Query: 478 gcccgcggccaattggcgcgacac 501 ||| |||||||| ||||| ||||| Sbjct: 417 gccggcggccaactggcgggacac 440 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 275 gtggtcggccaggtgcgggcggcggccgagacggtgggcttcttccaggtggtcagccac 334 ||||||| | ||||| || |||| ||||||||||| ||||||||||||||||||| ||| Sbjct: 214 gtggtcgccgaggtgaggacggccgccgagacggtcggcttcttccaggtggtcaaccat 273 Query: 335 ggcgt 339 ||||| Sbjct: 274 ggcgt 278
>ref|XM_482188.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1478 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 169 Query: 176 accgtccc 183 |||||||| Sbjct: 170 accgtccc 177 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 361 gatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgtacta 420 |||||||||| | | |||||||||| ||||| ||| || ||||| ||| |||| ||||| Sbjct: 373 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 432 Query: 421 cacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccagtcgcc 480 |||| ||||||||| ||| |||||| ||||| || |||||||||||| ||||||||||| Sbjct: 433 caccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgcc 492 Query: 481 cgcggccaattggcgcgacac 501 ||||| | ||||||||||| Sbjct: 493 ggcggcgcagtggcgcgacac 513
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 18563006 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 18562947 Query: 176 accgtccc 183 |||||||| Sbjct: 18562946 accgtccc 18562939 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 18536309 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 18536250 Query: 176 accgtccc 183 |||||||| Sbjct: 18536249 accgtccc 18536242 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 18485915 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 18485856 Query: 176 accgtccc 183 |||||||| Sbjct: 18485855 accgtccc 18485848 Score = 105 bits (53), Expect = 2e-19 Identities = 83/93 (89%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 18502852 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 18502793 Query: 176 accgtcccgcccatcttccaccaccctcccgac 208 ||| |||| | |||||| |||||| |||||| Sbjct: 18502792 accatcccctacttcttccgccacccgcccgac 18502760 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 358 cgagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgta 417 ||||||||||||| | |||||||| ||| ||||| ||| ||||| ||| ||| || Sbjct: 18562746 cgagatgctcgcggcggtgcggcgcttcaacgaggagcccctggaggcgaaggtgcccta 18562687 Query: 418 ctacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccagtc 477 ||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||| || Sbjct: 18562686 ctacaccagggacgtcgccagcaaggtccggttcaactccaacttcgacctcttccgttc 18562627 Query: 478 gcccgcggccaattggcgcgacac 501 ||| |||||||| ||||| ||||| Sbjct: 18562626 gccggcggccaactggcgggacac 18562603 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 361 gatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgtacta 420 |||||||||| | | |||||||||| ||||| ||| || ||||| ||| |||| ||||| Sbjct: 18485652 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 18485593 Query: 421 cacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccagtcgcc 480 |||| ||||||||| ||| |||||| ||||| || |||||||||||| ||||||||||| Sbjct: 18485592 caccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgcc 18485533 Query: 481 cgcggccaattggcgcgacac 501 ||||| | ||||||||||| Sbjct: 18485532 ggcggcgcagtggcgcgacac 18485512 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||||||||||||||||||| | |||||||| || || |||||| Sbjct: 18574441 ctccaggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcacc 18574500 Query: 176 accgtcccgcccatcttccaccaccctcccgactccctc 214 |||||||| | |||||||||||| |||||| ||||| Sbjct: 18574501 accgtccccgacttcttccaccaccagcccgaccccctc 18574539 Score = 93.7 bits (47), Expect = 6e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgtac 418 |||||||||||| | |||||||| ||||||||| ||| ||||| ||| ||||||| Sbjct: 18536067 gagatgctcgcggcggtgcggcgcttccacgaggagcccctggaggcgaaggtgccgtac 18536008 Query: 419 tacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttcc 473 |||||| ||||| ||||||| |||||| |||||||||||||||||| |||||||| Sbjct: 18536007 tacaccagggacgtcgccagcaaggtctggttcaactccaacttcggcctcttcc 18535953 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 416 tactacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccag 475 ||||||||| ||||| ||||||| |||||| |||||| ||||||||||||||| |||| Sbjct: 18502534 tactacaccagggacgtcgccagcaaggtccggttcagctccaacttcgacctgttccgt 18502475 Query: 476 tcgcccgcggccaattggcgcgacac 501 ||||| |||||||| ||||||||||| Sbjct: 18502474 tcgccggcggccaactggcgcgacac 18502449 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 18540554 ctccaggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcacc 18540495 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 401 gaggccaagacgccgtactacacccgggacctcgccaggaaggtcaggttcaactccaac 460 ||||| ||| |||| ||||||||| ||||| ||| ||| ||||| |||||| ||||||| Sbjct: 18575853 gaggcaaaggcgccatactacaccagggacgtcggcagcaaggttcggttcagctccaac 18575912 Query: 461 ttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 | |||||| |||| | |||| |||||||| ||||||||||| Sbjct: 18575913 tacgacctgttccggccgccggcggccaactggcgcgacac 18575953 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 275 gtggtcggccaggtgcgggcggcggccgagacggtgggcttcttccaggtggtcagccac 334 ||||||| | ||||| || |||| ||||||||||| ||||||||||||||||||| ||| Sbjct: 18562829 gtggtcgccgaggtgaggacggccgccgagacggtcggcttcttccaggtggtcaaccat 18562770 Query: 335 ggcgt 339 ||||| Sbjct: 18562769 ggcgt 18562765 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 291 gggcggcggccgagacggtgggcttcttccaggtggtcagccacggcgt 339 ||||||| || |||||||| ||||||||||||||||||| ||| ||||| Sbjct: 18536135 gggcggccgcggagacggtcggcttcttccaggtggtcaaccatggcgt 18536087 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 300 ccgagacggtgggcttcttccaggtggtcagccacg 335 |||||||||| ||||||||||||||||||| ||||| Sbjct: 18575752 ccgagacggtcggcttcttccaggtggtcaaccacg 18575787 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 292 ggcggcggccgagacggtgggcttcttccaggtggtcagccacggcgt 339 |||||| ||||||||||| |||||||||||||| |||| ||| ||||| Sbjct: 18502658 ggcggcagccgagacggtcggcttcttccaggttgtcaaccatggcgt 18502611 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 catcccggtcatcgacctctc 258 ||||||||||||||||||||| Sbjct: 9161029 catcccggtcatcgacctctc 9161009
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 145029 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 144970 Query: 176 accgtccc 183 |||||||| Sbjct: 144969 accgtccc 144962 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 118332 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 118273 Query: 176 accgtccc 183 |||||||| Sbjct: 118272 accgtccc 118265 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 67938 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 67879 Query: 176 accgtccc 183 |||||||| Sbjct: 67878 accgtccc 67871 Score = 105 bits (53), Expect = 2e-19 Identities = 83/93 (89%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 84875 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 84816 Query: 176 accgtcccgcccatcttccaccaccctcccgac 208 ||| |||| | |||||| |||||| |||||| Sbjct: 84815 accatcccctacttcttccgccacccgcccgac 84783 Score = 103 bits (52), Expect = 6e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 358 cgagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgta 417 ||||||||||||| | |||||||| ||| ||||| ||| ||||| ||| ||| || Sbjct: 144769 cgagatgctcgcggcggtgcggcgcttcaacgaggagcccctggaggcgaaggtgcccta 144710 Query: 418 ctacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccagtc 477 ||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||| || Sbjct: 144709 ctacaccagggacgtcgccagcaaggtccggttcaactccaacttcgacctcttccgttc 144650 Query: 478 gcccgcggccaattggcgcgacac 501 ||| |||||||| ||||| ||||| Sbjct: 144649 gccggcggccaactggcgggacac 144626 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 361 gatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgtacta 420 |||||||||| | | |||||||||| ||||| ||| || ||||| ||| |||| ||||| Sbjct: 67675 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 67616 Query: 421 cacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccagtcgcc 480 |||| ||||||||| ||| |||||| ||||| || |||||||||||| ||||||||||| Sbjct: 67615 caccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgcc 67556 Query: 481 cgcggccaattggcgcgacac 501 ||||| | ||||||||||| Sbjct: 67555 ggcggcgcagtggcgcgacac 67535 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||||||||||||||||||| | |||||||| || || |||||| Sbjct: 156464 ctccaggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcacc 156523 Query: 176 accgtcccgcccatcttccaccaccctcccgactccctc 214 |||||||| | |||||||||||| |||||| ||||| Sbjct: 156524 accgtccccgacttcttccaccaccagcccgaccccctc 156562 Score = 93.7 bits (47), Expect = 6e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgtac 418 |||||||||||| | |||||||| ||||||||| ||| ||||| ||| ||||||| Sbjct: 118090 gagatgctcgcggcggtgcggcgcttccacgaggagcccctggaggcgaaggtgccgtac 118031 Query: 419 tacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttcc 473 |||||| ||||| ||||||| |||||| |||||||||||||||||| |||||||| Sbjct: 118030 tacaccagggacgtcgccagcaaggtctggttcaactccaacttcggcctcttcc 117976 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 416 tactacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccag 475 ||||||||| ||||| ||||||| |||||| |||||| ||||||||||||||| |||| Sbjct: 84557 tactacaccagggacgtcgccagcaaggtccggttcagctccaacttcgacctgttccgt 84498 Query: 476 tcgcccgcggccaattggcgcgacac 501 ||||| |||||||| ||||||||||| Sbjct: 84497 tcgccggcggccaactggcgcgacac 84472 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 122577 ctccaggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcacc 122518 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 401 gaggccaagacgccgtactacacccgggacctcgccaggaaggtcaggttcaactccaac 460 ||||| ||| |||| ||||||||| ||||| ||| ||| ||||| |||||| ||||||| Sbjct: 157876 gaggcaaaggcgccatactacaccagggacgtcggcagcaaggttcggttcagctccaac 157935 Query: 461 ttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 | |||||| |||| | |||| |||||||| ||||||||||| Sbjct: 157936 tacgacctgttccggccgccggcggccaactggcgcgacac 157976 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 275 gtggtcggccaggtgcgggcggcggccgagacggtgggcttcttccaggtggtcagccac 334 ||||||| | ||||| || |||| ||||||||||| ||||||||||||||||||| ||| Sbjct: 144852 gtggtcgccgaggtgaggacggccgccgagacggtcggcttcttccaggtggtcaaccat 144793 Query: 335 ggcgt 339 ||||| Sbjct: 144792 ggcgt 144788 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 291 gggcggcggccgagacggtgggcttcttccaggtggtcagccacggcgt 339 ||||||| || |||||||| ||||||||||||||||||| ||| ||||| Sbjct: 118158 gggcggccgcggagacggtcggcttcttccaggtggtcaaccatggcgt 118110 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 300 ccgagacggtgggcttcttccaggtggtcagccacg 335 |||||||||| ||||||||||||||||||| ||||| Sbjct: 157775 ccgagacggtcggcttcttccaggtggtcaaccacg 157810 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 292 ggcggcggccgagacggtgggcttcttccaggtggtcagccacggcgt 339 |||||| ||||||||||| |||||||||||||| |||| ||| ||||| Sbjct: 84681 ggcggcagccgagacggtcggcttcttccaggttgtcaaccatggcgt 84634
>dbj|AK068286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K15, full insert sequence Length = 1478 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 169 Query: 176 accgtccc 183 |||||||| Sbjct: 170 accgtccc 177 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 361 gatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgtacta 420 |||||||||| | | |||||||||| ||||| ||| || ||||| ||| |||| ||||| Sbjct: 373 gatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctacta 432 Query: 421 cacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccagtcgcc 480 |||| ||||||||| ||| |||||| ||||| || |||||||||||| ||||||||||| Sbjct: 433 caccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgcc 492 Query: 481 cgcggccaattggcgcgacac 501 ||||| | ||||||||||| Sbjct: 493 ggcggcgcagtggcgcgacac 513
>ref|XM_482192.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 105 bits (53), Expect = 2e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37 ctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcacc 96 Query: 176 accgtcccgcccatcttccaccaccctcccgac 208 ||| |||| | |||||| |||||| |||||| Sbjct: 97 accatcccctacttcttccgccacccgcccgac 129 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 416 tactacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttccag 475 ||||||||| ||||| ||||||| |||||| |||||| ||||||||||||||| |||| Sbjct: 355 tactacaccagggacgtcgccagcaaggtccggttcagctccaacttcgacctgttccgt 414 Query: 476 tcgcccgcggccaattggcgcgacac 501 ||||| |||||||| ||||||||||| Sbjct: 415 tcgccggcggccaactggcgcgacac 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 292 ggcggcggccgagacggtgggcttcttccaggtggtcagccacggcgt 339 |||||| ||||||||||| |||||||||||||| |||| ||| ||||| Sbjct: 231 ggcggcagccgagacggtcggcttcttccaggttgtcaaccatggcgt 278
>ref|XM_470509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 37 ctccaggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcaca 96 Query: 176 accgtcccgcccatcttccaccacc 200 ||| |||| ||||||||||||||| Sbjct: 97 accatccccgccatcttccaccacc 121 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 448 gttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 |||||||||||| |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 378 gttcaactccaatttcgacctgttccagtcgccggccgccaactggcgtgacac 431 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaaga 410 |||||||| ||| | |||||||||||| ||||| |||||| |||| ||||| Sbjct: 289 gagatgctggcggcggtgcggcggttcaacgagcagccggcggagggcaaga 340
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 76077 ctccaggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcaca 76136 Query: 176 accgtcccgcccatcttccaccacc 200 ||| |||| ||||||||||||||| Sbjct: 76137 accatccccgccatcttccaccacc 76161 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 448 gttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 |||||||||||| |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 76418 gttcaactccaatttcgacctgttccagtcgccggccgccaactggcgtgacac 76471 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaaga 410 |||||||| ||| | |||||||||||| ||||| |||||| |||| ||||| Sbjct: 76329 gagatgctggcggcggtgcggcggttcaacgagcagccggcggagggcaaga 76380
>dbj|AK071828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118E08, full insert sequence Length = 1252 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 56 ctccaggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcaca 115 Query: 176 accgtcccgcccatcttccaccacc 200 ||| |||| ||||||||||||||| Sbjct: 116 accatccccgccatcttccaccacc 140 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 448 gttcaactccaacttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 |||||||||||| |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 397 gttcaactccaatttcgacctgttccagtcgccggccgccaactggcgtgacac 450 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaaga 410 |||||||| ||| | |||||||||||| ||||| |||||| |||| ||||| Sbjct: 308 gagatgctggcggcggtgcggcggttcaacgagcagccggcggagggcaaga 359
>ref|XM_482201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 252 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||||||||||||||||||| | |||||||| || || |||||| Sbjct: 61 ctccaggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcacc 120 Query: 176 accgtcccgcccatcttccaccaccctcccgactccctc 214 |||||||| | |||||||||||| |||||| ||||| Sbjct: 121 accgtccccgacttcttccaccaccagcccgaccccctc 159
>ref|XM_482196.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1146 Score = 93.7 bits (47), Expect = 6e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 359 gagatgctcgcgtccgtgcggcggttccacgagtcgccggccgaggccaagacgccgtac 418 |||||||||||| | |||||||| ||||||||| ||| ||||| ||| ||||||| Sbjct: 298 gagatgctcgcggcggtgcggcgcttccacgaggagcccctggaggcgaaggtgccgtac 357 Query: 419 tacacccgggacctcgccaggaaggtcaggttcaactccaacttcgacctcttcc 473 |||||| ||||| ||||||| |||||| |||||||||||||||||| |||||||| Sbjct: 358 tacaccagggacgtcgccagcaaggtctggttcaactccaacttcggcctcttcc 412 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 37 ctccaggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcacc 96 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 299 gccgagacggtgggcttcttccaggtggtcagccacggcgt 339 ||||||||||| ||||||||||||||||||| ||| ||||| Sbjct: 238 gccgagacggtcggcttcttccaggtggtcaaccatggcgt 278
>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1756_G07 Length = 149457 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 116 ctccaggcgttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggggtcacc 175 |||||||| ||||||||||||||||||||||||||| | |||||||| || || |||||| Sbjct: 1711 ctccaggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcacc 1770 Query: 176 accgtcccgcccatcttccaccaccctcccgactccctc 214 |||||||| | |||||||||||| |||||| ||||| Sbjct: 1771 accgtccccgacttcttccaccaccagcccgaccccctc 1809 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 401 gaggccaagacgccgtactacacccgggacctcgccaggaaggtcaggttcaactccaac 460 ||||| ||| |||| ||||||||| ||||| ||| ||| ||||| |||||| ||||||| Sbjct: 3123 gaggcaaaggcgccatactacaccagggacgtcggcagcaaggttcggttcagctccaac 3182 Query: 461 ttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 | |||||| |||| | |||| |||||||| ||||||||||| Sbjct: 3183 tacgacctgttccggccgccggcggccaactggcgcgacac 3223 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 300 ccgagacggtgggcttcttccaggtggtcagccacg 335 |||||||||| ||||||||||||||||||| ||||| Sbjct: 3022 ccgagacggtcggcttcttccaggtggtcaaccacg 3057
>ref|XM_482202.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 401 gaggccaagacgccgtactacacccgggacctcgccaggaaggtcaggttcaactccaac 460 ||||| ||| |||| ||||||||| ||||| ||| ||| ||||| |||||| ||||||| Sbjct: 589 gaggcaaaggcgccatactacaccagggacgtcggcagcaaggttcggttcagctccaac 648 Query: 461 ttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 | |||||| |||| | |||| |||||||| ||||||||||| Sbjct: 649 tacgacctgttccggccgccggcggccaactggcgcgacac 689 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 300 ccgagacggtgggcttcttccaggtggtcagccacg 335 |||||||||| ||||||||||||||||||| ||||| Sbjct: 488 ccgagacggtcggcttcttccaggtggtcaaccacg 523
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 451 caactccaacttcgacctcttccagtcgcccgcggccaattggcgcgaca 500 ||||| |||||||||||| | ||||||||| |||||||| |||||||||| Sbjct: 5525897 caactgcaacttcgacctgtaccagtcgccggcggccaactggcgcgaca 5525946 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 457 caacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctct 506 |||||||||||| | ||||||||| | |||||| ||||||||||| |||| Sbjct: 5555704 caacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 5555753
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 451 caactccaacttcgacctcttccagtcgcccgcggccaattggcgcgaca 500 ||||| |||||||||||| | ||||||||| |||||||| |||||||||| Sbjct: 80527 caactgcaacttcgacctgtaccagtcgccggcggccaactggcgcgaca 80576 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 457 caacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctct 506 |||||||||||| | ||||||||| | |||||| ||||||||||| |||| Sbjct: 110334 caacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 110383
>ref|XM_474682.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 457 caacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctct 506 |||||||||||| | ||||||||| | |||||| ||||||||||| |||| Sbjct: 441 caacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 490
>gb|AF540907.1| Zea mays 2-oxoglutarate-dependent oxygenase (bx6) mRNA, complete cds Length = 1365 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 454 ctccaacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctcttctgc 511 ||||||||||||||||||| || | | |||||| | ||||||||||| ||||||||| Sbjct: 473 ctccaacttcgacctcttcaaggccgctgcggccgactggcgcgacacgctcttctgc 530 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 gcggccgagacggtgggcttcttc 319 ||||||| |||||||||||||||| Sbjct: 315 gcggccgggacggtgggcttcttc 338
>dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E20, full insert sequence Length = 1387 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 457 caacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctct 506 |||||||||||| | ||||||||| | |||||| ||||||||||| |||| Sbjct: 451 caacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 500
>gb|AY104457.1| Zea mays PCO086194 mRNA sequence Length = 1459 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 454 ctccaacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctcttctgc 511 ||||||||||||||||||| || | | |||||| | ||||||||||| ||||||||| Sbjct: 493 ctccaacttcgacctcttcaaggccgctgcggccgactggcgcgacacgctcttctgc 550 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 gcggccgagacggtgggcttcttc 319 ||||||| |||||||||||||||| Sbjct: 335 gcggccgggacggtgggcttcttc 358
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 457 caacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctct 506 |||||||||||| | ||||||||| | |||||| ||||||||||| |||| Sbjct: 12911 caacttcgacctgtaccagtcgccggtggccaactggcgcgacacgctct 12960
>gb|AY110514.1| Zea mays CL948_1 mRNA sequence Length = 1344 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 457 caacttcgacctcttccagtcgcccgcggccaattggcgcgacac 501 |||||||||||| | |||||| |||| |||||| ||||||||||| Sbjct: 428 caacttcgacctgtaccagtctcccgtggccaactggcgcgacac 472
>ref|XM_613307.2| PREDICTED: Bos taurus similar to zinc finger protein 367, transcript variant 1 (LOC540823), mRNA Length = 1389 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 292 ggcggcggccgagacggtgggc 313 |||||||||||||||||||||| Sbjct: 360 ggcggcggccgagacggtgggc 339
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 ggacctcgccaggaaggtcagg 448 |||||||||||||||||||||| Sbjct: 3279809 ggacctcgccaggaaggtcagg 3279788
>gb|BC112540.1| Bos taurus cDNA clone IMAGE:8015090 Length = 1657 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 292 ggcggcggccgagacggtgggc 313 |||||||||||||||||||||| Sbjct: 69 ggcggcggccgagacggtgggc 90
>gb|BT024055.1| Zea mays clone EL01N0440A10 mRNA sequence Length = 1384 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 454 ctccaacttcgacctcttccagtcgcccgcggccaattggcgcgacaccctcttctgc 511 ||||||||||||||||||| || | | |||||| | ||||||||||| | ||||||| Sbjct: 480 ctccaacttcgacctcttcaaggctgctgcggccgactggcgcgacacgcccttctgc 537 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 gcggccgagacggtgggcttcttc 319 ||||||| |||||||||||||||| Sbjct: 322 gcggccgggacggtgggcttcttc 345
>emb|CR847514.13| Zebrafish DNA sequence from clone DKEYP-11D6 in linkage group 3, complete sequence Length = 165569 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 cccatcttccaccaccctcccg 206 |||||||||||||||||||||| Sbjct: 111555 cccatcttccaccaccctcccg 111534
>ref|NM_124043.2| Arabidopsis thaliana unknown protein AT5G46730 mRNA, complete cds Length = 1057 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 ctccacttcctccaccgccgccacc 238 ||||||||||||||||||| ||||| Sbjct: 673 ctccacttcctccaccgccaccacc 649
>ref|XM_480999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 939 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 catcccggtcatcgacctctc 258 ||||||||||||||||||||| Sbjct: 81 catcccggtcatcgacctctc 101
>ref|XM_476744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1298 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 311 ggcttcttccaggtggtcagccacggcgt 339 ||||||||||||||||| | ||||||||| Sbjct: 253 ggcttcttccaggtggtgaaccacggcgt 281
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 ccaccgccgccaccatcccgg 245 ||||||||||||||||||||| Sbjct: 4203103 ccaccgccgccaccatcccgg 4203123
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 catcccggtcatcgacctctc 258 ||||||||||||||||||||| Sbjct: 96046 catcccggtcatcgacctctc 96026
>ref|XM_814557.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510463.140) partial mRNA Length = 1125 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 215 tccacttcctccaccgccgccacca 239 |||||| |||||||||||||||||| Sbjct: 510 tccactgcctccaccgccgccacca 486
>ref|XM_814558.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510463.150) partial mRNA Length = 939 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 215 tccacttcctccaccgccgccacca 239 |||||| |||||||||||||||||| Sbjct: 453 tccactgcctccaccgccgccacca 429
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 211 cctctccacttcctccaccgccgccacca 239 ||||||||| |||||| |||||||||||| Sbjct: 34470 cctctccacctcctcctccgccgccacca 34498
>emb|AL121982.19|HS1185H19 Human DNA sequence from clone RP5-1185H19 on chromosome 1p13.1-13.3 Contains two novel genes and a CpG island, complete sequence Length = 104780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 accaccctcccgactccctct 215 ||||||||||||||||||||| Sbjct: 35295 accaccctcccgactccctct 35315
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 ccaccgccgccaccatcccgg 245 ||||||||||||||||||||| Sbjct: 44058 ccaccgccgccaccatcccgg 44078
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 ccaccgccgccaccatcccgg 245 ||||||||||||||||||||| Sbjct: 80084 ccaccgccgccaccatcccgg 80104
>gb|BT008615.1| Arabidopsis thaliana clone RAFL15-50-L08 (R50171) unknown protein (At5g46730) mRNA, complete cds Length = 1076 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 ctccacttcctccaccgccgccacc 238 ||||||||||||||||||| ||||| Sbjct: 673 ctccacttcctccaccgccaccacc 649
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 211 cctctccacttcctccaccgccgccacca 239 ||||||||| |||||| |||||||||||| Sbjct: 2054 cctctccacctcctcctccgccgccacca 2026
>ref|XM_396643.2| PREDICTED: Apis mellifera similar to ENSANGP00000006292 (LOC413193), mRNA Length = 1677 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 ctccacttcctccaccgccgccacc 238 |||||| |||||||||||||||||| Sbjct: 776 ctccacctcctccaccgccgccacc 800
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 tcctccaccgccgccaccatc 241 ||||||||||||||||||||| Sbjct: 17349882 tcctccaccgccgccaccatc 17349862
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 ggccgagacggtgggcttcttccag 322 |||||||||| |||||||||||||| Sbjct: 366748 ggccgagacgctgggcttcttccag 366772
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 tcctccaccgccgccaccatc 241 ||||||||||||||||||||| Sbjct: 136754 tcctccaccgccgccaccatc 136734
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 tcctccaccgccgccaccatc 241 ||||||||||||||||||||| Sbjct: 73795 tcctccaccgccgccaccatc 73775
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 catcccggtcatcgacctctc 258 ||||||||||||||||||||| Sbjct: 96523 catcccggtcatcgacctctc 96503
>dbj|AB016882.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZA15 Length = 79995 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 ctccacttcctccaccgccgccacc 238 ||||||||||||||||||| ||||| Sbjct: 46659 ctccacttcctccaccgccaccacc 46635
>dbj|AK121818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099A15, full insert sequence Length = 1301 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 311 ggcttcttccaggtggtcagccacggcgt 339 ||||||||||||||||| | ||||||||| Sbjct: 257 ggcttcttccaggtggtgaaccacggcgt 285
>dbj|AK107641.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F02, full insert sequence Length = 1812 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cctctccacttcctccaccgc 231 ||||||||||||||||||||| Sbjct: 111 cctctccacttcctccaccgc 131
>dbj|AK073307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026A10, full insert sequence Length = 1337 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 catcccggtcatcgacctctc 258 ||||||||||||||||||||| Sbjct: 147 catcccggtcatcgacctctc 167
>gb|AF134837.1|AF134837 Amycolatopsis mediterranei aspartokinase and aspartate-semialdehyde dehydrogenase operon, complete sequence Length = 2982 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 caggtgcgggcggcggccgag 304 ||||||||||||||||||||| Sbjct: 2004 caggtgcgggcggcggccgag 2024
>dbj|AK060318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F03, full insert sequence Length = 1298 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 311 ggcttcttccaggtggtcagccacggcgt 339 ||||||||||||||||| | ||||||||| Sbjct: 253 ggcttcttccaggtggtgaaccacggcgt 281
>gb|AY104706.1| Zea mays PCO076122 mRNA sequence Length = 1382 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 311 ggcttcttccaggtggtcagccacggcgt 339 ||||||||||||||||| | ||||||||| Sbjct: 291 ggcttcttccaggtggtgaaccacggcgt 319
>emb|AL731857.9| Mouse DNA sequence from clone RP23-106A3 on chromosome 2, complete sequence Length = 157220 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 gaaggtcaggttcaactccaa 459 ||||||||||||||||||||| Sbjct: 133455 gaaggtcaggttcaactccaa 133435
>ref|XM_550048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 515 gccggagctggaggagctcc 534
>ref|NM_194512.1| Oryza sativa (japonica cultivar-group) putative maize transposon MuDR mudrA-like protein (OSJNBa0071K19.12), mRNA Length = 2814 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ccctctccacttcctccacc 229 |||||||||||||||||||| Sbjct: 1343 ccctctccacttcctccacc 1324
>ref|NM_196009.1| Oryza sativa (japonica cultivar-group) putative membrane-associated salt-inducible protein (OSJNBb0076H04.15), mRNA Length = 2115 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 1406 gcctcctcgccgagatgctc 1425
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 131163 gccggagctggaggagctcc 131144
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11 map near 50283S, complete sequence Length = 148306 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 106055 gccggagctggaggagctcc 106074
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccctctccacttcctccacc 229 |||||||||||||||||||| Sbjct: 107309 ccctctccacttcctccacc 107328
>ref|XM_361594.1| Magnaporthe grisea 70-15 hypothetical protein (MG04068.4) partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 ccacttcctccaccgccgccacca 239 |||| ||||||||||||||||||| Sbjct: 281 ccacctcctccaccgccgccacca 258
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gagtcgccggccgaggccaagacg 412 |||||||||||| ||||||||||| Sbjct: 1775797 gagtcgccggccaaggccaagacg 1775820
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ttcctccaccgccgccacca 239 |||||||||||||||||||| Sbjct: 4051708 ttcctccaccgccgccacca 4051689
>gb|AY442257.1| Populus alba x Populus tremula clone cET-1-pop1-409 predicted protein mRNA, complete cds Length = 3436 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 caacactctgtctgtgatcc 28 |||||||||||||||||||| Sbjct: 385 caacactctgtctgtgatcc 366
>gb|AC083849.6| Homo sapiens BAC clone RP11-163I18 from 7, complete sequence Length = 128611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 caggaaggtcaggttcaact 455 |||||||||||||||||||| Sbjct: 109884 caggaaggtcaggttcaact 109865
>ref|XM_979594.1| PREDICTED: Mus musculus DMRT-like family B with proline-rich C-terminal, 1 (Dmrtb1), mRNA Length = 2000 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 212 ctctccacttcct-ccaccgccgccacc 238 ||||||||||||| |||||||||||||| Sbjct: 1142 ctctccacttcctgccaccgccgccacc 1169
>ref|XM_205469.6| PREDICTED: Mus musculus DMRT-like family B with proline-rich C-terminal, 1 (Dmrtb1), mRNA Length = 2000 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 212 ctctccacttcct-ccaccgccgccacc 238 ||||||||||||| |||||||||||||| Sbjct: 1142 ctctccacttcctgccaccgccgccacc 1169
>ref|XM_916034.2| PREDICTED: Mus musculus DMRT-like family B with proline-rich C-terminal, 1 (Dmrtb1), mRNA Length = 2000 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 212 ctctccacttcct-ccaccgccgccacc 238 ||||||||||||| |||||||||||||| Sbjct: 1142 ctctccacttcctgccaccgccgccacc 1169
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccctctccacttcctccacc 229 |||||||||||||||||||| Sbjct: 342251 ccctctccacttcctccacc 342270
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ggcgttcgacgacaccaaggccggcgtc 148 |||||||| ||||||||||| ||||||| Sbjct: 41427 ggcgttcgccgacaccaaggtcggcgtc 41454
>emb|BX294151.1| Pirellula sp. strain 1 complete genome; segment 19/24 Length = 295650 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctccaccgccgccaccat 240 |||||||||||||||||||| Sbjct: 203158 tcctccaccgccgccaccat 203177
>emb|AL596272.1|LMFL1994U Leishmania major Friedlin cosmid L1994, chimeric portion Length = 21597 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cccccaatctccgccacaga 46 |||||||||||||||||||| Sbjct: 20469 cccccaatctccgccacaga 20488
>emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosynthetic gene cluster Length = 84985 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 gcgggacgtcctgctggagt 578 |||||||||||||||||||| Sbjct: 46751 gcgggacgtcctgctggagt 46732
>emb|CR381570.12| Zebrafish DNA sequence from clone CH211-74M13 in linkage group 10, complete sequence Length = 151591 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cggtgggcttcttccaggtg 325 |||||||||||||||||||| Sbjct: 10782 cggtgggcttcttccaggtg 10801
>ref|NM_213041.1| Danio rerio zgc:73362 (zgc:73362), mRNA Length = 2548 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 ccacttcctccaccgccgccacca 239 |||||||||||| ||||||||||| Sbjct: 467 ccacttcctccagcgccgccacca 490
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 77257 gcctcctcgccgagatgctc 77276
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ccgccaggagctccaggcgt 125 |||||||||||||||||||| Sbjct: 328563 ccgccaggagctccaggcgt 328582
>dbj|AK132787.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930402G11 product:DMRT-like family B with proline-rich C-terminal, 1, full insert sequence Length = 1321 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 212 ctctccacttcct-ccaccgccgccacc 238 ||||||||||||| |||||||||||||| Sbjct: 462 ctctccacttcctgccaccgccgccacc 489
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 122172 gcctcctcgccgagatgctc 122153
>dbj|AK161436.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930584P19 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 1295 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 212 ctctccacttcct-ccaccgccgccacc 238 ||||||||||||| |||||||||||||| Sbjct: 442 ctctccacttcctgccaccgccgccacc 469
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 acgagtcgccggccgaggcc 406 |||||||||||||||||||| Sbjct: 1658754 acgagtcgccggccgaggcc 1658735
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 acgaccgccgccaggagctc 118 |||||||||||||||||||| Sbjct: 26541692 acgaccgccgccaggagctc 26541711
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 28172608 gccggagctggaggagctcc 28172589 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 13973218 gccggagctggaggagctcc 13973237
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 10481704 gcctcctcgccgagatgctc 10481685 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccctctccacttcctccacc 229 |||||||||||||||||||| Sbjct: 342251 ccctctccacttcctccacc 342270
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 30718554 gccggagctggaggagctcc 30718573 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 30714129 gccggagctggaggagctcc 30714148 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 1925612 gccggagctggaggagctcc 1925631
>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0021A09 Length = 127973 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 7829 gccggagctggaggagctcc 7848 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 3404 gccggagctggaggagctcc 3423
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 156406 gccggagctggaggagctcc 156425
>emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 in linkage group 17, complete sequence Length = 181677 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cccatcttccaccaccctcccgac 208 ||||||| |||||||||||||||| Sbjct: 93618 cccatctcccaccaccctcccgac 93595
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ggccaggtgcgggcggcggc 300 |||||||||||||||||||| Sbjct: 1475318 ggccaggtgcgggcggcggc 1475337
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 caccaaggccggcgtcaagg 152 |||||||||||||||||||| Sbjct: 217483 caccaaggccggcgtcaagg 217502
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ctcgtcgacgccggggtcaccacc 178 |||||||||||||||| ||||||| Sbjct: 2266164 ctcgtcgacgccggggacaccacc 2266141
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 166994 gccggagctggaggagctcc 167013
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 tgcgggacgtcctgctggag 577 |||||||||||||||||||| Sbjct: 110812 tgcgggacgtcctgctggag 110793
>dbj|AK111785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089N11, full insert sequence Length = 3650 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 acgaccgccgccaggagctc 118 |||||||||||||||||||| Sbjct: 594 acgaccgccgccaggagctc 613
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ccctctccacttcctccacc 229 |||||||||||||||||||| Sbjct: 1796 ccctctccacttcctccacc 1777
>dbj|AK110233.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-F06, full insert sequence Length = 2908 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cacagagcaccgtcgccggc 60 |||||||||||||||||||| Sbjct: 104 cacagagcaccgtcgccggc 123
>dbj|AK101176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029A13, full insert sequence Length = 3762 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 391 gcctcctcgccgagatgctc 410
>dbj|AK099994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132H24, full insert sequence Length = 2132 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 366 gcctcctcgccgagatgctc 385
>dbj|AK072615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134C11, full insert sequence Length = 3124 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ccctctccacttcctccacc 229 |||||||||||||||||||| Sbjct: 1270 ccctctccacttcctccacc 1251
>dbj|AK065104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N10, full insert sequence Length = 1832 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 390 gcctcctcgccgagatgctc 409
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cggcgtcaagggcctcgtcgacgc 165 |||||||||| ||||||||||||| Sbjct: 770648 cggcgtcaagcgcctcgtcgacgc 770671
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 140 gccggcgtcaagggcctcgtcgacgccg 167 ||||||||| |||||| ||||||||||| Sbjct: 2657161 gccggcgtccagggccgcgtcgacgccg 2657134
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcctcctcgccgagatgctc 367 |||||||||||||||||||| Sbjct: 10487743 gcctcctcgccgagatgctc 10487724 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccctctccacttcctccacc 229 |||||||||||||||||||| Sbjct: 342248 ccctctccacttcctccacc 342267
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 28157486 gccggagctggaggagctcc 28157467 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gccggagctggaggagctcc 548 |||||||||||||||||||| Sbjct: 14055220 gccggagctggaggagctcc 14055239
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 acgaccgccgccaggagctc 118 |||||||||||||||||||| Sbjct: 26469861 acgaccgccgccaggagctc 26469880
>emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727_H11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 85710 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 acgaccgccgccaggagctc 118 |||||||||||||||||||| Sbjct: 11697 acgaccgccgccaggagctc 11716
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 acgaccgccgccaggagctc 118 |||||||||||||||||||| Sbjct: 383 acgaccgccgccaggagctc 364
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ggccaggtgcgggcggcggc 300 |||||||||||||||||||| Sbjct: 1150013 ggccaggtgcgggcggcggc 1150032
>gb|AF020191.1|AF020191 Mus musculus proline-rich protein 13 mRNA, partial cds Length = 1370 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 212 ctctccacttcct-ccaccgccgccacc 238 ||||||||||||| |||||||||||||| Sbjct: 364 ctctccacttcctgccaccgccgccacc 391
>gb|AF022741.1|AF022741 Oryza sativa thioredoxin F isoform mRNA, complete cds Length = 808 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acgggccggcctcctcgccg 359 |||||||||||||||||||| Sbjct: 134 acgggccggcctcctcgccg 153
>gb|U68763.1|GMU68763 Glycine max putative transcription factor SCOF-1 (scof-1) mRNA, complete cds Length = 996 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 ccacttcctccaccgccgccacca 239 ||||||||||| |||||||||||| Sbjct: 433 ccacttcctccgccgccgccacca 456
>dbj|AP006708.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09I23, TM0590c, complete sequence Length = 79353 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 ccacttcctccaccgccgccacca 239 |||||||| ||||||||||||||| Sbjct: 9905 ccacttccgccaccgccgccacca 9928
>dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01K09, TM0278, complete sequence Length = 82082 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cctccaccgccgccaccatc 241 |||||||||||||||||||| Sbjct: 32405 cctccaccgccgccaccatc 32424
>emb|AL627259.8| Mouse DNA sequence from clone RP23-399H3 on chromosome 4, complete sequence Length = 176063 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 212 ctctccacttcct-ccaccgccgccacc 238 ||||||||||||| |||||||||||||| Sbjct: 151968 ctctccacttcctgccaccgccgccacc 151941
>gb|BC064707.1| Danio rerio zgc:73362, mRNA (cDNA clone MGC:73362 IMAGE:4144799), complete cds Length = 2548 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 ccacttcctccaccgccgccacca 239 |||||||||||| ||||||||||| Sbjct: 467 ccacttcctccagcgccgccacca 490
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctccaccgccgccaccatcc 242 |||||||||||||||||||| Sbjct: 23762 ctccaccgccgccaccatcc 23743 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,945,715 Number of Sequences: 3902068 Number of extensions: 3945715 Number of successful extensions: 107735 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 104271 Number of HSP's gapped (non-prelim): 3469 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
