>emb|AL713860.12| Mouse DNA sequence from clone RP23-446K18 on chromosome 11 Contains
            the Ccl8 and Ccl1 genes for chemokine (C-C motif) ligand
            8 and 1, complete sequence
          Length = 129489

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    atcctcccctcctgccaagc 26
            ||||||||||||||||||||
Sbjct: 9138 atcctcccctcctgccaagc 9157

>gb|AC012294.15| Mus musculus chromosome 11, clone RP23-328G11, complete sequence
          Length = 222121

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     atcctcccctcctgccaagc 26
             ||||||||||||||||||||
Sbjct: 21761 atcctcccctcctgccaagc 21742

>emb|AL713839.1|CNS07YOT Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
              clone 149H13 of library Caltech CITB-BAC from chromosome 11
              of Mus musculus (mouse)
          Length = 240425

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      atcctcccctcctgccaagc 26
              ||||||||||||||||||||
Sbjct: 152569 atcctcccctcctgccaagc 152588

>emb|AL607034.16| Mouse DNA sequence from clone RP23-303K9 on chromosome 11, complete
             sequence
          Length = 143148

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     atcctcccctcctgccaagc 26
             ||||||||||||||||||||
Sbjct: 72088 atcctcccctcctgccaagc 72069

>gb|AE008860.1| Salmonella typhimurium LT2, section 164 of 220 of the complete genome
          Length = 21321

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     aatcctcccctcctgccaa 24
             |||||||||||||||||||
Sbjct: 10541 aatcctcccctcctgccaa 10559

>emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 17/20
          Length = 265050

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      aatcctcccctcctgccaa 24
              |||||||||||||||||||
Sbjct: 211991 aatcctcccctcctgccaa 211973

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 6       aatcctcccctcctgccaa 24
               |||||||||||||||||||
Sbjct: 3451315 aatcctcccctcctgccaa 3451333

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 6       aatcctcccctcctgccaa 24
               |||||||||||||||||||
Sbjct: 4169638 aatcctcccctcctgccaa 4169620

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 6       aatcctcccctcctgccaa 24
               |||||||||||||||||||
Sbjct: 3599094 aatcctcccctcctgccaa 3599112

>ref|XM_525264.1| PREDICTED: Pan troglodytes jagged 1 (LOC469879), mRNA
          Length = 4581

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 9    cctcccctcctgccaagc 26
            ||||||||||||||||||
Sbjct: 2233 cctcccctcctgccaagc 2216

>gb|AC107711.13| Mus musculus chromosome 14, clone RP23-291I12, complete sequence
          Length = 228302

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      cggaatcctcccctcctg 20
              ||||||||||||||||||
Sbjct: 159744 cggaatcctcccctcctg 159761

>gb|AC125125.4| Mus musculus BAC clone RP24-274E6 from chromosome 8, complete sequence
          Length = 180801

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    cgatccccggaaagtttc 43
             ||||||||||||||||||
Sbjct: 68049 cgatccccggaaagtttc 68066

>gb|AC123529.3| Mus musculus BAC clone RP23-425M11 from chromosome 8, complete sequence
          Length = 181535

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     ctcccctcctgccaagcg 27
              ||||||||||||||||||
Sbjct: 106985 ctcccctcctgccaagcg 107002

>gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, complete sequence
          Length = 230139

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    ctcccctcctgccaagcg 27
             ||||||||||||||||||
Sbjct: 29110 ctcccctcctgccaagcg 29127

>emb|AL035456.26|HS1099D15 Human DNA sequence from clone RP5-1099D15 on chromosome 20 Contains the
             3' end of a novel gene, the JAG1 gene encoding Jagged 1
             (involved in Alagille syndrome), a pseudogene aimilar to
             DNAJ protein, a CpG island, ESTs, STSs and GSSs, complete
             sequence
          Length = 125952

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 9     cctcccctcctgccaagc 26
             ||||||||||||||||||
Sbjct: 58694 cctcccctcctgccaagc 58711

>gb|AC118487.4| Rattus norvegicus 2 BAC CH230-285C2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 177865

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     cggaatcctcccctcctg 20
             ||||||||||||||||||
Sbjct: 67637 cggaatcctcccctcctg 67620

>gb|AC009506.5| Homo sapiens BAC clone RP11-542H1 from 2, complete sequence
          Length = 191764

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 7      atcctcccctcctgccaa 24
              ||||||||||||||||||
Sbjct: 114558 atcctcccctcctgccaa 114541

>emb|AL713981.17| Mouse DNA sequence from clone RP23-173O12 on chromosome 2, complete
             sequence
          Length = 223609

 Score = 36.2 bits (18), Expect = 6.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 9     cctcccctcctgccaagc 26
             ||||||||||||||||||
Sbjct: 89777 cctcccctcctgccaagc 89794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 294,562
Number of Sequences: 3902068
Number of extensions: 294562
Number of successful extensions: 68181
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68119
Number of HSP's gapped (non-prelim): 62
length of query: 49
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 29
effective length of database: 17,155,003,908
effective search space: 497495113332
effective search space used: 497495113332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)