>SCM_DROME (Q9VHA0) Polycomb protein Scm (Sex comb on midleg protein)|
          Length = 877

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = -3

Query: 290 GKDARTEEGEMSRRPVTRRRETAGTRESADTASRSAAP--ETVGVENRRQWVRPSSSRTR 117
           G+D+ T  G  S  P      T+    SA + S SA+P   T     +RQ  RP+   T 
Sbjct: 4   GRDSSTSSGSNSAAPGASTNATSSASASASSTSTSASPGSTTSPASTQRQRGRPAKRATC 63

Query: 116 IWYRE 102
            W  E
Sbjct: 64  TWCGE 68

>BMP3_HUMAN (P12645) Bone morphogenetic protein 3 precursor (BMP-3)|
           (Osteogenin) (BMP-3A)
          Length = 472

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 130 AAAPGSGTGRPRPWRAVAVAVGETLASYLWPLAEVVELKG 11
           A  PGS  G  +PWR   +  G T+ S+    AE +E KG
Sbjct: 73  ARTPGSLEGGSQPWRPRLLREGNTVRSFRAAAAETLERKG 112

>YBX2A_XENLA (P21574) Y-box-binding protein 2-A (Cytoplasmic RNA-binding protein|
           p56) (mRNP4)
          Length = 336

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -3

Query: 314 DAEGNWPSGKDARTEEGEMSRRPVTRRRETAGTRESADTASRSAAPE 174
           D E    SG+D R E      RP  +RR   G  + A TA      E
Sbjct: 251 DGEAKAESGEDPRPEPQRQRNRPYVQRRRRQGATQVAATAQGEGKAE 297

>UL51_PRVKA (Q85227) Protein UL51|
          Length = 236

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 57  RVSPTATATARHGRGLPVPD---PGAAARRPHPLPP 155
           R  P     A  G GLPVP    P A A RP P PP
Sbjct: 157 RRQPAPVRAAPAGLGLPVPAQPAPRATAARPAPPPP 192

>VGLC_VZVS (P10241) Glycoprotein GPV|
          Length = 591

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +3

Query: 6   PLPFNSTTSARGQR*DARVSPTATATARHGRGLPVPDP-----GAAARRPHP 146
           P P  + TSA  ++ D  V+PT+ AT +       PDP      AA+R+P P
Sbjct: 71  PDPAVAPTSAASRKPDPAVAPTSAATRK-------PDPAVAPTSAASRKPDP 115

>NFI_XYLFT (Q87CZ0) Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)|
           (Deoxyribonuclease V) (DNase V)
          Length = 239

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
 Frame = +1

Query: 13  PSIQRPPPEARGRTLGFRXXXXXXRAMAEVSRYQILVRLLDGRTHCLRFST--PTVSGA- 183
           P++   P    G  +GF       RA A +     L RLL+  TH +R  T  P V G  
Sbjct: 37  PNLLSEPTLLAGFDVGFEDEGRTTRAAAVLMNAGDL-RLLE--THVVRVPTSMPYVPGLL 93

Query: 184 ------ALLDAVSALSRVPAV 228
                 ALL A++ LSR+PA+
Sbjct: 94  SFRELPALLQALTQLSRIPAL 114

>VGLC_VZVD (P09256) Glycoprotein GPV|
          Length = 560

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +3

Query: 6   PLPFNSTTSARGQR*DARVSPTATATARHGRGLPVPDP-----GAAARRPHP 146
           P P  + TSA  ++ D  V+PT+ AT +       PDP      AA+R+P P
Sbjct: 96  PDPAVAPTSAASRKPDPAVAPTSAATRK-------PDPAVAPTSAASRKPDP 140



 Score = 28.9 bits (63), Expect = 9.0
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +3

Query: 6   PLPFNSTTSARGQR*DARVSPTATATARHGRGLPVPDP-----GAAARRPHP 146
           P P  + TSA  ++ D  V+PT+ AT +       PDP      AA+R+P P
Sbjct: 68  PDPAVAPTSAASRKPDPAVAPTSAATRK-------PDPAVAPTSAASRKPDP 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,772,493
Number of Sequences: 219361
Number of extensions: 672783
Number of successful extensions: 3456
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3440
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)