>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic kidney|
            disease protein 1)
          Length = 4303

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 241  MNHLIIAHVYSVMRVDPRGPPRVDVIPRLQALLPDPVGEETH 116
            M H+++ +V+        GPPR+  +   +AL PDP G   H
Sbjct: 3727 MAHVLLPYVHGNQSSPELGPPRLRQVRLQEALYPDPPGPRVH 3768

>IF2_DESPS (Q6AJY4) Translation initiation factor IF-2|
          Length = 939

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 239 ESPYHRPRIFRDARRPTRPSTSRCDPPPSGSPSRS 135
           E P  R    R  R+PTRP  +R   P + SP+RS
Sbjct: 240 ELPIQREEPSRPRRKPTRPPVNRSPRPSTPSPNRS 274

>PDZK4_MOUSE (Q9QY39) PDZ domain-containing protein 4 (PDZ domain-containing|
           RING finger protein 4-like protein)
          Length = 772

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 283 DRSCSDLLVPSSGKMNHLIIAHVYSVMRVDPRGPPRVDVIPRLQALLPDPVGEE 122
           D SC DL +  SG    +   H+ ++ ++ P  PP   + P + + LP P+  E
Sbjct: 59  DSSCHDLQLVDSGTQTDITFEHIMALGKLRPPTPPMGILEPYVLSELP-PISHE 111

>PDZK4_HUMAN (Q76G19) PDZ domain-containing protein 4 (PDZ domain-containing|
           RING finger protein 4-like protein)
          Length = 769

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -2

Query: 283 DRSCSDLLVPSSGKMNHLIIAHVYSVMRVDPRGPPRVDVIPRLQALLPDPVGEE 122
           D SC DL +  SG    +   H+ ++ ++ P  PP V        L P P+  E
Sbjct: 59  DSSCHDLQLVDSGTQTDITFEHIMALGKLRPPTPPMV-------ILEPPPISHE 105

>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1734

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 224  RPRIFRDARRPTR-PSTSRCDPPPSGSPSRSCWR 126
            RP+ F +A  P + PS SR  P  S +PS  CW+
Sbjct: 1523 RPQAFEEATNPLQVPSLSRSGPT-SPTPSEGCWK 1555

>AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor|
          Length = 1216

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +2

Query: 155 KAGDHIYSWRAAWVYAHHGIYVGDDKVIHFTRGRDQEVGTGTVIDFLLVSSGPNRSSTPC 334
           ++G H   W  AWV  HH +       + F   RD   GT   +D + V  GP  ++  C
Sbjct: 759 RSGTHGNRWHQAWVTLHHQLQPSTKYQLLFEGLRDGYHGT-MGLDDMAVRPGPCWAAKRC 817

Query: 335 LVCSSD 352
               SD
Sbjct: 818 SFEDSD 823

>UN112_DROME (Q9VZI3) Unc-112-related protein (Fermitin-1)|
          Length = 708

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 116 MGLLSNRIGKESLKAGDHIYSWR 184
           +G+ +NRI +  L  GDHI +WR
Sbjct: 615 LGVANNRIMRMDLNTGDHIKTWR 637


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,806,174
Number of Sequences: 219361
Number of extensions: 1611116
Number of successful extensions: 5100
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5097
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)