Clone Name | bart35a11 |
---|---|
Clone Library Name | barley_pub |
>gb|AY106423.1| Zea mays PCO101267 mRNA sequence Length = 791 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 297 gctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaagggaaat 356 ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| | Sbjct: 392 gctggattcggcagcacagtggagctgcaattctgtgcctcctgctcgtacaagggaact 451 Query: 357 gcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttgcat 416 ||| ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| Sbjct: 452 gcagtgaccatgaagcgcatgctggaaacctcatttcctggcattcatgttatcttgcat 511 Query: 417 aattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaagtt 476 |||||||| || | ||||||||||| ||||| |||||| | || ||| || |||||||| Sbjct: 512 aattatcctcctccattccccaagcgtgtactcagcaaagttatcccaattgttcaagtt 571 Query: 477 ggagccattgcaacaataatggctggtgaccaga 510 |||||| ||||||||||||||||||||||||||| Sbjct: 572 ggagccgttgcaacaataatggctggtgaccaga 605 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 52 cgatggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacc 111 ||||||| |||| |||| | ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 126 cgatggatcgcgcgcagttgctcctcgtcggactcccggccttgctcttcttctccgacc 185 Query: 112 tctcccacatcttcgcgccgccgcctccccacctccgccaccc 154 || | |||||||||||||||||||||||||||||||||||||| Sbjct: 186 tcactcacatcttcgcgccgccgcctccccacctccgccaccc 228
>gb|AY596588.1| Saccharum officinarum clone SCUTLR2030F03, complete sequence Length = 1185 Score = 238 bits (120), Expect = 1e-59 Identities = 189/212 (89%) Strand = Plus / Minus Query: 297 gctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaagggaaat 356 ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| | Sbjct: 813 gctggattcggcagcacagtggagctgcaattctgtgcctcctgctcgtacaagggaact 754 Query: 357 gcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttgcat 416 || ||||||||| ||||||||||||||| ||||||||||||||| ||||| |||||| | Sbjct: 753 gcggtgaccatgacgcgcatgctggaaacctcatttcctggcattcatgttatcttgcgt 694 Query: 417 aattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaagtt 476 |||||||| || | ||||||||||| ||||| |||||| | || ||| || |||||||| Sbjct: 693 aattatcctcctccattccccaagcgtgtactcagcaaagttatcccaattgttcaagtt 634 Query: 477 ggagccattgcaacaataatggctggtgacca 508 |||||||||||||||||||||||||||||||| Sbjct: 633 ggagccattgcaacaataatggctggtgacca 602 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacctc 113 |||||||||| |||||| ||||| ||||| ||||| || | |||||| ||||||||||| Sbjct: 1065 atggaccgcgcgcagctgctccttgtcggactcccggccttcctcttcttctccgacctc 1006 Query: 114 tcccacatcttcgcgccgccgcctccccacctccgccaccctc 156 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 actcacatcttcgcgccgccgcctccccacctccgccaccctc 963
>ref|XM_475399.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 222 bits (112), Expect = 9e-55 Identities = 187/212 (88%) Strand = Plus / Plus Query: 294 ggagctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaaggga 353 |||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 286 ggagctggatatggcaccaccgtcgagctgcaattctgcgcctcctgctcgtacaagggg 345 Query: 354 aatgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttg 413 | ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 346 actgcaatgactatgaagcgcatgctggaaacatcatttccaggcattcatgttatcttg 405 Query: 414 cataattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaa 473 || ||||| || ||| |||||||||| || ||||| ||||| | ||||| || |||| Sbjct: 406 cacaattaccctccacccttccccaaacgtgtacttggcaaacttgtgccaattcttcag 465 Query: 474 gttggagccattgcaacaataatggctggtga 505 |||||||||||||||||||||||||||||||| Sbjct: 466 gttggagccattgcaacaataatggctggtga 497 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacctc 113 ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| Sbjct: 1 atggaccgcgtgcagctcctcctcgtcggtctccccgccctcctcttcctctccgacctc 60 Query: 114 tcccacatcttcgcgccgccgcctccccacctccgccaccc 154 ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 61 tcccacatcttcgcgccgccgccgccgcatctccggcaccc 101
>dbj|AK061873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A06, full insert sequence Length = 1123 Score = 222 bits (112), Expect = 9e-55 Identities = 187/212 (88%) Strand = Plus / Plus Query: 294 ggagctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaaggga 353 |||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 365 ggagctggatatggcaccaccgtcgagctgcaattctgcgcctcctgctcgtacaagggg 424 Query: 354 aatgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttg 413 | ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 425 actgcaatgactatgaagcgcatgctggaaacatcatttccaggcattcatgttatcttg 484 Query: 414 cataattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaa 473 || ||||| || ||| |||||||||| || ||||| ||||| | ||||| || |||| Sbjct: 485 cacaattaccctccacccttccccaaacgtgtacttggcaaacttgtgccaattcttcag 544 Query: 474 gttggagccattgcaacaataatggctggtga 505 |||||||||||||||||||||||||||||||| Sbjct: 545 gttggagccattgcaacaataatggctggtga 576 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacctc 113 ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| Sbjct: 80 atggaccgcgtgcagctcctcctcgtcggtctccccgccctcctcttcctctccgacctc 139 Query: 114 tcccacatcttcgcgccgccgcctccccacctccgccaccc 154 ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 140 tcccacatcttcgcgccgccgccgccgcatctccggcaccc 180
>dbj|AK098945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050H09, full insert sequence Length = 1093 Score = 222 bits (112), Expect = 9e-55 Identities = 187/212 (88%) Strand = Plus / Plus Query: 294 ggagctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaaggga 353 |||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 377 ggagctggatatggcaccaccgtcgagctgcaattctgcgcctcctgctcgtacaagggg 436 Query: 354 aatgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttg 413 | ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 437 actgcaatgactatgaagcgcatgctggaaacatcatttccaggcattcatgttatcttg 496 Query: 414 cataattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaa 473 || ||||| || ||| |||||||||| || ||||| ||||| | ||||| || |||| Sbjct: 497 cacaattaccctccacccttccccaaacgtgtacttggcaaacttgtgccaattcttcag 556 Query: 474 gttggagccattgcaacaataatggctggtga 505 |||||||||||||||||||||||||||||||| Sbjct: 557 gttggagccattgcaacaataatggctggtga 588 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacctc 113 ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| Sbjct: 92 atggaccgcgtgcagctcctcctcgtcggtctccccgccctcctcttcctctccgacctc 151 Query: 114 tcccacatcttcgcgccgccgcctccccacctccgccaccc 154 ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 152 tcccacatcttcgcgccgccgccgccgcatctccggcaccc 192
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 155 bits (78), Expect = 2e-34 Identities = 132/150 (88%) Strand = Plus / Plus Query: 356 tgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttgca 415 ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 144805 tgcaatgactatgaagcgcatgctggaaacatcatttccaggcattcatgttatcttgca 144864 Query: 416 taattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaagt 475 ||||| || ||| |||||||||| || ||||| ||||| | ||||| || |||| || Sbjct: 144865 caattaccctccacccttccccaaacgtgtacttggcaaacttgtgccaattcttcaggt 144924 Query: 476 tggagccattgcaacaataatggctggtga 505 |||||||||||||||||||||||||||||| Sbjct: 144925 tggagccattgcaacaataatggctggtga 144954 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacctc 113 ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| Sbjct: 142857 atggaccgcgtgcagctcctcctcgtcggtctccccgccctcctcttcctctccgacctc 142916 Query: 114 tcccacatcttcgcgccgccgcctccccacctccgccaccc 154 ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 142917 tcccacatcttcgcgccgccgccgccgcatctccggcaccc 142957 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 294 ggagctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaag 350 |||||||||| ||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 143240 ggagctggatatggcaccaccgtcgagctgcaattctgcgcctcctgctcgtacaag 143296
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 155 bits (78), Expect = 2e-34 Identities = 132/150 (88%) Strand = Plus / Plus Query: 356 tgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttgca 415 ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 99056 tgcaatgactatgaagcgcatgctggaaacatcatttccaggcattcatgttatcttgca 99115 Query: 416 taattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaagt 475 ||||| || ||| |||||||||| || ||||| ||||| | ||||| || |||| || Sbjct: 99116 caattaccctccacccttccccaaacgtgtacttggcaaacttgtgccaattcttcaggt 99175 Query: 476 tggagccattgcaacaataatggctggtga 505 |||||||||||||||||||||||||||||| Sbjct: 99176 tggagccattgcaacaataatggctggtga 99205 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacctc 113 ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| Sbjct: 97108 atggaccgcgtgcagctcctcctcgtcggtctccccgccctcctcttcctctccgacctc 97167 Query: 114 tcccacatcttcgcgccgccgcctccccacctccgccaccc 154 ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 97168 tcccacatcttcgcgccgccgccgccgcatctccggcaccc 97208 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 294 ggagctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaag 350 |||||||||| ||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 97491 ggagctggatatggcaccaccgtcgagctgcaattctgcgcctcctgctcgtacaag 97547
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 155 bits (78), Expect = 2e-34 Identities = 132/150 (88%) Strand = Plus / Plus Query: 356 tgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgttttcttgca 415 ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 22789606 tgcaatgactatgaagcgcatgctggaaacatcatttccaggcattcatgttatcttgca 22789665 Query: 416 taattatccgccagccttccccaagcgggtactgagcaaaatcatgccagttattcaagt 475 ||||| || ||| |||||||||| || ||||| ||||| | ||||| || |||| || Sbjct: 22789666 caattaccctccacccttccccaaacgtgtacttggcaaacttgtgccaattcttcaggt 22789725 Query: 476 tggagccattgcaacaataatggctggtga 505 |||||||||||||||||||||||||||||| Sbjct: 22789726 tggagccattgcaacaataatggctggtga 22789755 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctccccgcgctgctcttcatctccgacctc 113 ||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| Sbjct: 22787658 atggaccgcgtgcagctcctcctcgtcggtctccccgccctcctcttcctctccgacctc 22787717 Query: 114 tcccacatcttcgcgccgccgcctccccacctccgccaccc 154 ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 22787718 tcccacatcttcgcgccgccgccgccgcatctccggcaccc 22787758 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 294 ggagctggattcggcacgactgtggagctgcaattctgcgcctcctgctcgtacaag 350 |||||||||| ||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 22788041 ggagctggatatggcaccaccgtcgagctgcaattctgcgcctcctgctcgtacaag 22788097 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 125 cgcgccgccgcctccccacctccgccacc 153 |||||||||| ||||| |||||||||||| Sbjct: 27271790 cgcgccgccggctccctacctccgccacc 27271762 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gtcggcctccccgcgctgctc 98 ||||||||||||||||||||| Sbjct: 24597155 gtcggcctccccgcgctgctc 24597175
>gb|BT016302.1| Zea mays clone Contig135 mRNA sequence Length = 902 Score = 99.6 bits (50), Expect = 9e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 327 ttctgcgcctcctgctcgtacaagggaaatgcaatgaccatgaagcgcatgctggaaaca 386 |||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||| Sbjct: 210 ttctgcgcctcctgctcgtacaggggaactgcaatgaccatgaaacggatgctggaaacc 269 Query: 387 tcatttcctggcattaatgttttcttgcataattatcc 424 || |||||||| || ||||| ||||| | |||||||| Sbjct: 270 tcctttcctgggatccatgttgtcttggaaaattatcc 307
>gb|AY109230.1| Zea mays PCO070603 mRNA sequence Length = 1134 Score = 99.6 bits (50), Expect = 9e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 327 ttctgcgcctcctgctcgtacaagggaaatgcaatgaccatgaagcgcatgctggaaaca 386 |||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||| Sbjct: 394 ttctgcgcctcctgctcgtacaggggaactgcaatgaccatgaaacggatgctggaaacc 453 Query: 387 tcatttcctggcattaatgttttcttgcataattatcc 424 || |||||||| || ||||| ||||| | |||||||| Sbjct: 454 tcctttcctgggatccatgttgtcttggaaaattatcc 491 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 51 gcgatggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||| |||||| | ||| ||||||||||| Sbjct: 172 gcgatggaccgcgtccagctcgtgctcctcggcctcccc 210
>ref|NM_190451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 699 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 327 ttctgcgcctcctgctcgtacaagggaaatgcaatgaccatgaagcgcatgctggaaaca 386 ||||||||||||||||| || | |||||||||| | ||| ||||| ||||||||||| Sbjct: 244 ttctgcgcctcctgctcttataggggaaatgcagtcaccgtgaagaagatgctggaaacc 303 Query: 387 tcatttcctggcattaatgt 406 ||||||||||| ||| |||| Sbjct: 304 tcatttcctggtattcatgt 323 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||||||| | ||| ||||||||||| Sbjct: 1 atggaccgcgtgcagctcgtgctcctcggcctcccc 36
>dbj|AK120744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G13, full insert sequence Length = 1951 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 327 ttctgcgcctcctgctcgtacaagggaaatgcaatgaccatgaagcgcatgctggaaaca 386 ||||||||||||||||| || | |||||||||| | ||| ||||| ||||||||||| Sbjct: 1342 ttctgcgcctcctgctcttataggggaaatgcagtcaccgtgaagaagatgctggaaacc 1401 Query: 387 tcatttcctggcattaatgt 406 ||||||||||| ||| |||| Sbjct: 1402 tcatttcctggtattcatgt 1421 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||||||| | ||| ||||||||||| Sbjct: 1099 atggaccgcgtgcagctcgtgctcctcggcctcccc 1134
>dbj|AK060017.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G02, full insert sequence Length = 1076 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 327 ttctgcgcctcctgctcgtacaagggaaatgcaatgaccatgaagcgcatgctggaaaca 386 ||||||||||||||||| || | |||||||||| | ||| ||||| ||||||||||| Sbjct: 327 ttctgcgcctcctgctcttataggggaaatgcagtcaccgtgaagaagatgctggaaacc 386 Query: 387 tcatttcctggcattaatgt 406 ||||||||||| ||| |||| Sbjct: 387 tcatttcctggtattcatgt 406 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||||||| | ||| ||||||||||| Sbjct: 84 atggaccgcgtgcagctcgtgctcctcggcctcccc 119
>dbj|AK068980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002I10, full insert sequence Length = 952 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 327 ttctgcgcctcctgctcgtacaagggaaatgcaatgaccatgaagcgcatgctggaaaca 386 ||||||||||||||||| || | |||||||||| | ||| ||||| ||||||||||| Sbjct: 327 ttctgcgcctcctgctcttataggggaaatgcagtcaccgtgaagaagatgctggaaacc 386 Query: 387 tcatttcctgg 397 ||||||||||| Sbjct: 387 tcatttcctgg 397 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||||||| | ||| ||||||||||| Sbjct: 84 atggaccgcgtgcagctcgtgctcctcggcctcccc 119
>dbj|AK103803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033146J16, full insert sequence Length = 1977 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 54 atggaccgcgtgcagctcctcctcgtcgg 82 ||||||||||||||||||||||||||||| Sbjct: 34 atggaccgcgtgcagctcctcctcgtcgg 62
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||||||| | ||| ||||||||||| Sbjct: 35606270 atggaccgcgtgcagctcgtgctcctcggcctcccc 35606235 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 350 gggaaatgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgt 406 |||||||||| | ||| ||||| ||||||||||| ||||||||||| ||| |||| Sbjct: 35604589 gggaaatgcagtcaccgtgaagaagatgctggaaacctcatttcctggtattcatgt 35604533 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 1268957 cgccgccgcctccccacctcc 1268937
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||||||| | ||| ||||||||||| Sbjct: 136457 atggaccgcgtgcagctcgtgctcctcggcctcccc 136422 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 350 gggaaatgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgt 406 |||||||||| | ||| ||||| ||||||||||| ||||||||||| ||| |||| Sbjct: 134776 gggaaatgcagtcaccgtgaagaagatgctggaaacctcatttcctggtattcatgt 134720
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 54 atggaccgcgtgcagctcctcctcgtcggcctcccc 89 |||||||||||||||||| | ||| ||||||||||| Sbjct: 9607 atggaccgcgtgcagctcgtgctcctcggcctcccc 9572 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 350 gggaaatgcaatgaccatgaagcgcatgctggaaacatcatttcctggcattaatgt 406 |||||||||| | ||| ||||| ||||||||||| ||||||||||| ||| |||| Sbjct: 7926 gggaaatgcagtcaccgtgaagaagatgctggaaacctcatttcctggtattcatgt 7870
>ref|XM_749327.1| Aspergillus fumigatus Af293 high-affinity hexose transporter (Afu3g12010) partial mRNA Length = 1560 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 134 gcctccccacctccgccaccctcatg 159 |||||||||||||| ||||||||||| Sbjct: 905 gcctccccacctccaccaccctcatg 930
>gb|AC074140.5| Homo sapiens chromosome 19 clone LLNLF-18A12, complete sequence Length = 37049 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 aaagaaaaggaacggaggagag 27 |||||||||||||||||||||| Sbjct: 4044 aaagaaaaggaacggaggagag 4023
>gb|AC098825.3| Homo sapiens BAC clone RP11-506A18 from 4, complete sequence Length = 175758 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 gaaaaagaaaaggaacggagga 24 |||||||||||||||||||||| Sbjct: 171003 gaaaaagaaaaggaacggagga 171024
>ref|XM_482291.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 gcgccgccgcctccccacctccgcc 150 ||||||||| ||||||||||||||| Sbjct: 637 gcgccgccggctccccacctccgcc 613 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 cttcgcgccgccgcctccccacctc 146 ||||||||||||| ||||||||||| Sbjct: 528 cttcgcgccgccggctccccacctc 504
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 132157 cgccgccgcctccccacctcc 132177
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gtcggcctccccgcgctgctc 98 ||||||||||||||||||||| Sbjct: 111337 gtcggcctccccgcgctgctc 111357
>gb|AC135512.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0057M06, complete sequence Length = 147673 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 85188 cgccgccgcctccccacctcc 85208
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 125 cgcgccgccgcctccccacctccgccacc 153 |||||||||| ||||| |||||||||||| Sbjct: 146758 cgcgccgccggctccctacctccgccacc 146730
>emb|AL606605.4|OSJN00049 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089E12, complete sequence Length = 154111 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agctcctcctcgtcggcctcc 87 ||||||||||||||||||||| Sbjct: 87044 agctcctcctcgtcggcctcc 87024
>gb|AC016398.6| Homo sapiens chromosome 10 clone RP11-561G1, complete sequence Length = 158817 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gcctccccacctccgccaccc 154 ||||||||||||||||||||| Sbjct: 71605 gcctccccacctccgccaccc 71625
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agctcctcctcgtcggcctcc 87 ||||||||||||||||||||| Sbjct: 3743623 agctcctcctcgtcggcctcc 3743603
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 122 cttcgcgccgccgcctccccacctccgcc 150 ||||||||||||| |||||||||| |||| Sbjct: 10997230 cttcgcgccgccggctccccacctacgcc 10997258 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 gctcctcctcgtcggcctccccgcgctg 95 ||||| ||||||||||||| |||||||| Sbjct: 24071866 gctccacctcgtcggcctctccgcgctg 24071893
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 15579681 cgccgccgcctccccacctcc 15579701 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 7006899 cgccgccgcctccccacctcc 7006919
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cttcgcgccgccgcctccccacctc 146 ||||||||||||| ||||||||||| Sbjct: 19265087 cttcgcgccgccggctccccacctc 19265111 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 gcgccgccgcctccccacctccgcc 150 ||||||||| ||||||||||||||| Sbjct: 19264978 gcgccgccggctccccacctccgcc 19265002 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 gcgccgccgcctccccacctccgcc 150 ||||||||| ||||||||||||||| Sbjct: 19264598 gcgccgccggctccccacctccgcc 19264622
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 15565884 cgccgccgcctccccacctcc 15565904 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctccgcc 150 ||||||||||||||||| |||||| Sbjct: 8741840 cgccgccgcctccccacatccgcc 8741817
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 122 cttcgcgccgccgcctccccacctccgcc 150 ||||||||| ||| ||||||||||||||| Sbjct: 7834529 cttcgcgcctccggctccccacctccgcc 7834501
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cctccccacctccgccaccctcatg 159 |||||||||| |||||||||||||| Sbjct: 109940 cctccccacccccgccaccctcatg 109964
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 62611 cgccgccgcctccccacctcc 62591
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 122 cttcgcgccgccgcctccccacctccgcc 150 ||||||||| ||| ||||||||||||||| Sbjct: 48911 cttcgcgcctccggctccccacctccgcc 48883
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 122 cttcgcgccgccgcctccccacctccgcc 150 ||||||||| ||| ||||||||||||||| Sbjct: 147027 cttcgcgcctccggctccccacctccgcc 146999
>dbj|AK120064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B02, full insert sequence Length = 3712 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 2958 cgccgccgcctccccacctcc 2938
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 cttcgcgccgccgcctccccacctc 146 ||||||||||||| ||||||||||| Sbjct: 38100 cttcgcgccgccggctccccacctc 38124 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 gcgccgccgcctccccacctccgcc 150 ||||||||| ||||||||||||||| Sbjct: 37991 gcgccgccggctccccacctccgcc 38015 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 gcgccgccgcctccccacctccgcc 150 ||||||||| ||||||||||||||| Sbjct: 37611 gcgccgccggctccccacctccgcc 37635
>dbj|AP005737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062P14 Length = 168223 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 84367 cgccgccgcctccccacctcc 84387
>dbj|AK111451.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B11, full insert sequence Length = 2256 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agctcctcctcgtcggcctcc 87 ||||||||||||||||||||| Sbjct: 684 agctcctcctcgtcggcctcc 664
>dbj|AK101381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036E16, full insert sequence Length = 3281 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 2327 cgccgccgcctccccacctcc 2307
>dbj|AK065486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020M22, full insert sequence Length = 2937 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gtcggcctccccgcgctgctc 98 ||||||||||||||||||||| Sbjct: 118 gtcggcctccccgcgctgctc 98
>dbj|AK064242.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-B06, full insert sequence Length = 2516 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gtcggcctccccgcgctgctc 98 ||||||||||||||||||||| Sbjct: 135 gtcggcctccccgcgctgctc 115
>dbj|AK062819.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-E12, full insert sequence Length = 999 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 296 cgccgccgcctccccacctcc 316
>dbj|AK062129.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E02, full insert sequence Length = 1211 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 622 cgccgccgcctccccacctcc 602
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 15667297 cgccgccgcctccccacctcc 15667317 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgccgccgcctccccacctcc 147 ||||||||||||||||||||| Sbjct: 7073366 cgccgccgcctccccacctcc 7073386
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 122 cttcgcgccgccgcctccccacctccgcc 150 ||||||||||||| |||||||||| |||| Sbjct: 10996929 cttcgcgccgccggctccccacctacgcc 10996957 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 gctcctcctcgtcggcctccccgcgctg 95 ||||| ||||||||||||| |||||||| Sbjct: 24000072 gctccacctcgtcggcctctccgcgctg 24000099
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134082 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 122 cttcgcgccgccgcctccccacctccgcc 150 ||||||||||||| |||||||||| |||| Sbjct: 108345 cttcgcgccgccggctccccacctacgcc 108317
>ref|NM_114598.2| Arabidopsis thaliana unknown protein AT3G47300 mRNA, complete cds Length = 804 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctcctgctcgtacaagggaa 354 |||||||||||||||||||| Sbjct: 195 ctcctgctcgtacaagggaa 214
>ref|XM_468529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1272 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 ctcttcatctccgacctctcccac 119 ||||||||||||| |||||||||| Sbjct: 190 ctcttcatctccggcctctcccac 213
>gb|DQ215519.1| Taeniopygia guttata clone 0058P0016F12 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 502 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 60 ctcctcctcctcgggctccccgcgctgc 33
>gb|DQ215518.1| Taeniopygia guttata clone 0061P0021D04 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 508 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 63 ctcctcctcctcgggctccccgcgctgc 36
>gb|DQ215517.1| Taeniopygia guttata clone 0058P0034H11 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 519 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 60 ctcctcctcctcgggctccccgcgctgc 33
>gb|DQ215516.1| Taeniopygia guttata clone 0058P0027G06 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 515 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215515.1| Taeniopygia guttata clone 0058P0045H03 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 520 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215514.1| Taeniopygia guttata clone 0061P0016D06 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 518 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215513.1| Taeniopygia guttata clone 0058P0002B09 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 517 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215512.1| Taeniopygia guttata clone 0058P0009A08 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 561 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 116 ctcctcctcctcgggctccccgcgctgc 89
>gb|DQ215511.1| Taeniopygia guttata clone 0058P0060H03 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 520 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215510.1| Taeniopygia guttata clone 0058P0056G11 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 515 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 69 ctcctcctcctcgggctccccgcgctgc 42
>gb|DQ215509.1| Taeniopygia guttata clone 0058P0043F02 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 509 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 65 ctcctcctcctcgggctccccgcgctgc 38
>gb|DQ215508.1| Taeniopygia guttata clone 0061P0020D07 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 518 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 74 ctcctcctcctcgggctccccgcgctgc 47
>gb|DQ215507.1| Taeniopygia guttata clone 0058P0025D02 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 520 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215506.1| Taeniopygia guttata clone 0058P0010B08 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 520 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215505.1| Taeniopygia guttata clone 0061P0012A07 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 519 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215504.1| Taeniopygia guttata clone 0058P0044B11 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 506 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 60 ctcctcctcctcgggctccccgcgctgc 33
>gb|DQ215503.1| Taeniopygia guttata clone 0061P0002B10 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 495 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 49 ctcctcctcctcgggctccccgcgctgc 22
>gb|DQ215502.1| Taeniopygia guttata clone 0061P0016B01 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 513 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215501.1| Taeniopygia guttata clone 0058P0044H08 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 516 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215500.1| Taeniopygia guttata clone 0061P0017C11 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 503 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 60 ctcctcctcctcgggctccccgcgctgc 33
>gb|DQ215499.1| Taeniopygia guttata clone 0061P0002B11 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 495 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 49 ctcctcctcctcgggctccccgcgctgc 22
>gb|DQ215498.1| Taeniopygia guttata clone 0058P0015D06 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 518 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 70 ctcctcctcctcgggctccccgcgctgc 43
>gb|DQ215497.1| Taeniopygia guttata clone 0061P0027A02 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 520 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 73 ctcctcctcctcgggctccccgcgctgc 46
>gb|DQ215496.1| Taeniopygia guttata clone 0058P0059D04 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 494 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 50 ctcctcctcctcgggctccccgcgctgc 23
>gb|DQ215495.1| Taeniopygia guttata clone 0058P0061G08 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 521 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 74 ctcctcctcctcgggctccccgcgctgc 47
>gb|DQ215494.1| Taeniopygia guttata clone 0058P0012G06 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 496 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 50 ctcctcctcctcgggctccccgcgctgc 23
>gb|DQ215492.1| Taeniopygia guttata clone 0058P0002F11 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 516 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 57 ctcctcctcctcgggctccccgcgctgc 30
>gb|DQ215491.1| Taeniopygia guttata clone 0058P0015D12 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 505 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 60 ctcctcctcctcgggctccccgcgctgc 33
>gb|DQ215490.1| Taeniopygia guttata clone 0058P0015H08 ubiquinol-cytochrome c reductase hinge protein-like mRNA, complete sequence Length = 522 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 69 ctcctcctcgtcggcctccccgcgctgc 96 ||||||||| |||| ||||||||||||| Sbjct: 77 ctcctcctcctcgggctccccgcgctgc 50
>ref|XM_477307.1| Oryza sativa (japonica cultivar-group), mRNA Length = 915 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctccgcc 150 ||||||||||||||||| |||||| Sbjct: 594 cgccgccgcctccccacatccgcc 571
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cgtgcagctcctcctcgtcg 81 |||||||||||||||||||| Sbjct: 178317 cgtgcagctcctcctcgtcg 178298
>ref|XM_364372.1| Magnaporthe grisea 70-15 hypothetical protein (MG09217.4) partial mRNA Length = 1257 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ctgcgcctcctgctcgtaca 348 |||||||||||||||||||| Sbjct: 843 ctgcgcctcctgctcgtaca 824
>gb|AE002143.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 44 of 59 of the complete genome Length = 16155 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 atgttttcttgcataattat 422 |||||||||||||||||||| Sbjct: 2539 atgttttcttgcataattat 2520
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcgatggcgatggaccgcgt 64 |||||||||||||||||||| Sbjct: 1820948 gcgatggcgatggaccgcgt 1820929
>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence Length = 211296 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ctggaaacatcatttcctgg 397 |||||||||||||||||||| Sbjct: 108538 ctggaaacatcatttcctgg 108557
>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence Length = 319367 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ctggaaacatcatttcctgg 397 |||||||||||||||||||| Sbjct: 199746 ctggaaacatcatttcctgg 199765
>gb|BT010507.1| Arabidopsis thaliana At3g47300 gene, complete cds Length = 630 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctcctgctcgtacaagggaa 354 |||||||||||||||||||| Sbjct: 195 ctcctgctcgtacaagggaa 214
>emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chromosome 22, complete sequence Length = 70823 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 cgccagccttccccaagcgg 443 |||||||||||||||||||| Sbjct: 69607 cgccagccttccccaagcgg 69588
>emb|AL157699.13| Human DNA sequence from clone RP13-55H22 on chromosome Xq12-21.1 Contains the PJA1 gene for praja 1, a high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 119185 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gccgcctccccacctccgcc 150 |||||||||||||||||||| Sbjct: 348 gccgcctccccacctccgcc 367
>emb|AL096769.7|HS1080B10 Human DNA sequence from clone RP5-1080B10 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 81798 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ggaaatgcaatgaccatgaa 370 |||||||||||||||||||| Sbjct: 54358 ggaaatgcaatgaccatgaa 54377
>gb|BT009386.1| Triticum aestivum clone wlm96.pk034.m17:fis, full insert mRNA sequence Length = 1030 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gctcctcctcgtcggcctcc 87 |||||||||||||||||||| Sbjct: 59 gctcctcctcgtcggcctcc 78
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcgatggcgatggaccgcgt 64 |||||||||||||||||||| Sbjct: 3154865 gcgatggcgatggaccgcgt 3154846
>emb|AL627222.10| Mouse DNA sequence from clone RP23-265A5 on chromosome 11 Contains a novel gene, the Tac4 gene for tachykinin, the Myst2 gene for MYST histone acetyltransferase 2, two novel genes, the 5' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik) and a CpG island, complete sequence Length = 185645 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cctccccacctccgccaccc 154 |||||||||||||||||||| Sbjct: 180003 cctccccacctccgccaccc 179984
>emb|BX649452.4| Zebrafish DNA sequence from clone DKEY-226L10 in linkage group 24, complete sequence Length = 192113 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 atactgaagcccaatctgga 289 |||||||||||||||||||| Sbjct: 152777 atactgaagcccaatctgga 152758
>gb|DQ421306.1| Uncultured soil fungus clone 167-18 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 929 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tggaaacatcatttcctggc 398 |||||||||||||||||||| Sbjct: 122 tggaaacatcatttcctggc 141
>emb|BX248581.17| Zebrafish DNA sequence from clone CH211-208O6 in linkage group 24, complete sequence Length = 202872 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 atactgaagcccaatctgga 289 |||||||||||||||||||| Sbjct: 111551 atactgaagcccaatctgga 111532
>emb|CR536603.4| Human DNA sequence from clone WI2-2439F13 on chromosome 22, complete sequence Length = 10245 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 cgccagccttccccaagcgg 443 |||||||||||||||||||| Sbjct: 784 cgccagccttccccaagcgg 765
>gb|AC078873.22| Homo sapiens 12q BAC RP11-916O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190073 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 taatgttttcttgcataatt 420 |||||||||||||||||||| Sbjct: 20053 taatgttttcttgcataatt 20034
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcgatggcgatggaccgcgt 64 |||||||||||||||||||| Sbjct: 2307024 gcgatggcgatggaccgcgt 2307005
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ctcttcatctccgacctctcccac 119 ||||||||||||| |||||||||| Sbjct: 35694657 ctcttcatctccggcctctcccac 35694634
>emb|BX825283.1|CNS0A6EY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL26ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 759 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctcctgctcgtacaagggaa 354 |||||||||||||||||||| Sbjct: 161 ctcctgctcgtacaagggaa 180
>ref|XM_221129.3| PREDICTED: Rattus norvegicus envoplakin (predicted) (Evpl_predicted), mRNA Length = 6213 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccgccgcctccccacctcc 147 |||||||||||||||||||| Sbjct: 4333 gccgccgcctccccacctcc 4314
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 cgctgctcttcatctccgacctct 114 |||||||||||||||||| ||||| Sbjct: 1121685 cgctgctcttcatctccggcctct 1121708
>dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039C01 Length = 151054 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cgccgccgcctccccacctccgcc 150 ||||||||||||||||| |||||| Sbjct: 100481 cgccgccgcctccccacatccgcc 100458
>dbj|AK176362.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL24-06-L15 Length = 945 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctcctgctcgtacaagggaa 354 |||||||||||||||||||| Sbjct: 258 ctcctgctcgtacaagggaa 277
>dbj|AK176038.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL22-76-I04 Length = 884 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctcctgctcgtacaagggaa 354 |||||||||||||||||||| Sbjct: 263 ctcctgctcgtacaagggaa 282
>dbj|AK175455.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL21-88-D05 Length = 836 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctcctgctcgtacaagggaa 354 |||||||||||||||||||| Sbjct: 232 ctcctgctcgtacaagggaa 251
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ctcttcatctccgacctctcccac 119 ||||||||||||| |||||||||| Sbjct: 55271 ctcttcatctccggcctctcccac 55248
>dbj|AK099986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130A09, full insert sequence Length = 1964 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 gctcctcctcgtcggcctccccgcgctg 95 ||||| ||||||||||||| |||||||| Sbjct: 611 gctccacctcgtcggcctctccgcgctg 638
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 gctcctcctcgtcggcctccccgcgctg 95 ||||| ||||||||||||| |||||||| Sbjct: 15530 gctccacctcgtcggcctctccgcgctg 15503
>emb|AL772223.7| Mouse DNA sequence from clone RP23-372J10 on chromosome 4, complete sequence Length = 211954 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tgccagttattcaagttgga 479 |||||||||||||||||||| Sbjct: 68574 tgccagttattcaagttgga 68555 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,544,211 Number of Sequences: 3902068 Number of extensions: 4544211 Number of successful extensions: 111730 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109976 Number of HSP's gapped (non-prelim): 1754 length of query: 510 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 488 effective length of database: 17,147,199,772 effective search space: 8367833488736 effective search space used: 8367833488736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)