Clone Name | bart35a09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ADRB1_CANFA (P79148) Beta-1 adrenergic receptor (Beta-1 adrenoce... | 33 | 0.40 | 2 | UL51_PRVKA (Q85227) Protein UL51 | 29 | 7.5 | 3 | IF4B_YEAST (P34167) Eukaryotic translation initiation factor 4B ... | 29 | 9.7 | 4 | TOM1_MOUSE (O88746) Target of Myb protein 1 | 29 | 9.7 | 5 | ZN499_HUMAN (Q96K62) Zinc finger protein 499 | 29 | 9.7 |
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>ADRB1_CANFA (P79148) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 473 Score = 33.5 bits (75), Expect = 0.40 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 4/39 (10%) Frame = -1 Query: 235 RGTHRRTGKPP---PPPSTCLRRETDDPD-DDASAALGA 131 RG+H G PP PPPS + DD D DDA A GA Sbjct: 396 RGSHGAAGDPPRARPPPSPGAASDDDDDDEDDAGAGAGA 434
>UL51_PRVKA (Q85227) Protein UL51| Length = 236 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -1 Query: 235 RGTHRRTGKPPPPPSTCLRRETDDPDDDASAAL 137 R T R PPPP E D P+DDA+ L Sbjct: 181 RATAARPAPPPPPEEAGEDEEGDRPEDDAAPLL 213
>IF4B_YEAST (P34167) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 436 Score = 28.9 bits (63), Expect = 9.7 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -1 Query: 235 RGTHRRTGKPPPPPSTCLRRETDDPDDDASAALGANLE 122 RG++ ++ PP RRE ++PD D SAA G+N + Sbjct: 292 RGSNFQSSSRPP------RREREEPDIDWSAARGSNFQ 323
>TOM1_MOUSE (O88746) Target of Myb protein 1| Length = 492 Score = 28.9 bits (63), Expect = 9.7 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -1 Query: 214 GKPPPPPSTCLRRETDDPDDDASAAL 137 G P P P T RR+T + DDD AL Sbjct: 467 GPPRPSPGTAPRRKTQEKDDDMLFAL 492
>ZN499_HUMAN (Q96K62) Zinc finger protein 499| Length = 511 Score = 28.9 bits (63), Expect = 9.7 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 14/66 (21%) Frame = -2 Query: 255 PLGPPRSGEPTVGLESLRHRRRHVCAAKP--------------TIRTMMPAPPSEQISNG 118 P P P + LRHR RH+ AA+P R +PAPP+ + G Sbjct: 133 PTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG 192 Query: 117 RWICPS 100 PS Sbjct: 193 PDADPS 198 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,572,020 Number of Sequences: 219361 Number of extensions: 843780 Number of successful extensions: 3861 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3824 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)