ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart35a03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C08, full insert sequence Length = 1325 Score = 682 bits (344), Expect = 0.0 Identities = 437/468 (93%) Strand = Plus / Plus Query: 120 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 179 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 197 Query: 180 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 257 Query: 240 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 299 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 258 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 317 Query: 300 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 359 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 318 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 377 Query: 360 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 419 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 378 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 437 Query: 420 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 479 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 438 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 497 Query: 480 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 539 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 498 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 557 Query: 540 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 |||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 558 aatacccaccaaagcatactatgctgtggaggaggttaaagagaatgc 605
>dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D07, full insert sequence Length = 1373 Score = 682 bits (344), Expect = 0.0 Identities = 437/468 (93%) Strand = Plus / Plus Query: 120 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 179 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 152 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 211 Query: 180 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 271 Query: 240 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 299 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 272 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 331 Query: 300 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 359 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 332 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 391 Query: 360 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 419 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 392 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 451 Query: 420 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 479 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 452 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 511 Query: 480 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 539 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 512 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 571 Query: 540 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 |||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 572 aatacccaccaaagcatactatgctgtggaggaggttaaagagaatgc 619
>dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F12, full insert sequence Length = 1431 Score = 674 bits (340), Expect = 0.0 Identities = 436/468 (93%) Strand = Plus / Plus Query: 120 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 179 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 211 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 270 Query: 180 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 330 Query: 240 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 299 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 331 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 390 Query: 300 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 359 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 391 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 450 Query: 360 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 419 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 451 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 510 Query: 420 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 479 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 511 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 570 Query: 480 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 539 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 571 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 630 Query: 540 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 |||||||||||||||||| ||||||| || ||||||||||||||||| Sbjct: 631 aatacccaccaaagcatactatgctgcggaggaggttaaagagaatgc 678
>dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mRNA for 26S proteasome regulatory particle non-ATPase subunit8, complete cds Length = 1308 Score = 666 bits (336), Expect = 0.0 Identities = 435/468 (92%) Strand = Plus / Plus Query: 120 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 179 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 123 ggagatggacgtggtgaaggcggcgcacgtctcggggcggacgctggagaaggtggtggt 182 Query: 180 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 242 Query: 240 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 299 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 243 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 302 Query: 300 ctcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgacca 359 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 303 ctcctacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatca 362 Query: 360 taattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgt 419 ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 363 taattaccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgt 422 Query: 420 tggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtt 479 ||||||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || Sbjct: 423 tggctggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactatt 482 Query: 480 taccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggg 539 | |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || Sbjct: 483 caataactatgttcctaaccctgtcctggtgattattgatgttcaacccaaggagttagg 542 Query: 540 aatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 |||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 543 aatacccaccaaagcatactatgctgtggaggaggttaaagagaatgc 590
>gb|AY109022.1| Zea mays PCO082032 mRNA sequence Length = 1409 Score = 577 bits (291), Expect = e-161 Identities = 423/467 (90%) Strand = Plus / Plus Query: 121 gagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggtg 180 ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct: 131 gagatggacgtggtgaaggcggcgcagttgtcggggcggacgctggaacgggtagtggtg 190 Query: 181 cacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgg 240 || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcccttggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgc 250 Query: 241 aagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaac 300 ||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||| Sbjct: 251 aagcgcgtcgtcggcgtcctcctcggcacctcatcccgcgggtccgtcgatgtcaccaac 310 Query: 301 tcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccat 360 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 311 tcctacgccgtgccgtttgaggaggatgacaaggatcctaggatctggttccttgaccac 370 Query: 361 aattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgtt 420 |||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 371 aattaccacgagtcaatgttctccatgttcaagaggattaatgccaaggagcatgttgtt 430 Query: 421 ggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgttt 480 ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| || Sbjct: 431 ggctggtacagcactggcccaaaactaagggagaacgacttggatgtccatgcattattc 490 Query: 481 accaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttggga 540 | || |||||||||||||| || |||||||||| ||||| |||||||||||| |||| Sbjct: 491 aacagttatgttcctaatccagtcttggtgattattgatgtccaacccaaggagctgggt 550 Query: 541 atacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 ||||| |||||||| || || ||||| || ||||||||||||||||| Sbjct: 551 ataccgaccaaagcgtactacgctgtggaggaggttaaagagaatgc 597
>ref|XM_474221.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 557 bits (281), Expect = e-155 Identities = 366/393 (93%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 124 atggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggtgcac 183 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 atggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggtgcac 60 Query: 184 ccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccggaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 61 ccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccgcaag 120 Query: 244 cgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaactcc 303 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 121 cgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaactcc 180 Query: 304 tacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataat 363 ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 181 tacgccgtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataat 240 Query: 364 taccatgagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgttggc 423 ||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 taccacgaatcgatgttttccatgttcaagaggatcaacgccaaggagcatgttgttggc 300 Query: 424 tggtacagcactggtccaaaactaaaggagaacgacttggatgttcatgcattgtttacc 483 ||||||||||| ||||||||||| | |||||||||||||||| | || ||| | || | Sbjct: 301 tggtacagcaccggtccaaaactcagggagaacgacttggatatacacgcactattcaat 360 Query: 484 aactatgttcct-aatcctgtgctggtgattat 515 |||||||||||| || ||||| ||||||||||| Sbjct: 361 aactatgttcctcaaccctgtcctggtgattat 393
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 331 bits (167), Expect = 2e-87 Identities = 185/191 (96%) Strand = Plus / Plus Query: 120 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 179 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 23366 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 23425 Query: 180 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23426 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 23485 Query: 240 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 299 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 23486 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 23545 Query: 300 ctcctacgccg 310 ||||||||||| Sbjct: 23546 ctcctacgccg 23556 Score = 131 bits (66), Expect = 3e-27 Identities = 87/94 (92%) Strand = Plus / Plus Query: 310 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 369 ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 23786 gtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataattaccac 23845 Query: 370 gagtctatgttctccatgttcaagaggatcaacg 403 || || ||||| |||||||||||||||||||||| Sbjct: 23846 gaatcgatgttttccatgttcaagaggatcaacg 23879 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 403 gccaaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 462 |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 23962 gccaaggagcatgttgttggctggtacagcaccggtccaaaactcagggagaacgacttg 24021 Query: 463 gat 465 ||| Sbjct: 24022 gat 24024 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/100 (90%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 486 ctatgttcct-aatcctgtgctggtgattatcga-tgttcaacccaaggagttgggaata 543 |||||||||| || ||||| ||||||||||| || |||||||||||||||||| |||||| Sbjct: 24798 ctatgttcctcaaccctgtcctggtgattattgaatgttcaacccaaggagttaggaata 24857 Query: 544 cccaccaaagcatattatgctgttg-aagaggttaaagag 582 |||||||||||||| |||||||| | | |||||||||||| Sbjct: 24858 cccaccaaagcatactatgctgtggcaggaggttaaagag 24897
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 331 bits (167), Expect = 2e-87 Identities = 185/191 (96%) Strand = Plus / Plus Query: 120 ggagatggacgtggtgaaggcggcgcagctgtcggggcggacgctggagaaggtggtggt 179 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33811467 ggagatggacgtggtgaaggcggcgcagctctcggggcggacgctggagaaggtggtggt 33811526 Query: 180 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33811527 gcacccgctggtgctgctcagcatcgtcgaccactacaaccgcgtcgcccgcgacacccg 33811586 Query: 240 gaagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggcgtcgtcgacgtcaccaa 299 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 33811587 caagcgcgtcgtcggcgtgctcctcggcacctcctcccgcggttccgtcgatgtcaccaa 33811646 Query: 300 ctcctacgccg 310 ||||||||||| Sbjct: 33811647 ctcctacgccg 33811657 Score = 131 bits (66), Expect = 3e-27 Identities = 87/94 (92%) Strand = Plus / Plus Query: 310 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 369 ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 33811887 gtgccgtttgaagaggatgacaaggatccgaggatctggttcctcgatcataattaccac 33811946 Query: 370 gagtctatgttctccatgttcaagaggatcaacg 403 || || ||||| |||||||||||||||||||||| Sbjct: 33811947 gaatcgatgttttccatgttcaagaggatcaacg 33811980 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 403 gccaaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 462 |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct: 33812063 gccaaggagcatgttgttggctggtacagcaccggtccaaaactcagggagaacgacttg 33812122 Query: 463 gat 465 ||| Sbjct: 33812123 gat 33812125 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/100 (90%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 486 ctatgttcct-aatcctgtgctggtgattatcga-tgttcaacccaaggagttgggaata 543 |||||||||| || ||||| ||||||||||| || |||||||||||||||||| |||||| Sbjct: 33812899 ctatgttcctcaaccctgtcctggtgattattgaatgttcaacccaaggagttaggaata 33812958 Query: 544 cccaccaaagcatattatgctgttg-aagaggttaaagag 582 |||||||||||||| |||||||| | | |||||||||||| Sbjct: 33812959 cccaccaaagcatactatgctgtggcaggaggttaaagag 33812998
>ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV34) mRNA, complete cds Length = 1372 Score = 143 bits (72), Expect = 7e-31 Identities = 240/296 (81%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 298 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 357 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 358 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 417 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 418 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 477 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 478 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 537 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 538 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgc 593
>gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA, RPN8a-2 allele, complete cds Length = 932 Score = 143 bits (72), Expect = 7e-31 Identities = 240/296 (81%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 169 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 228 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 229 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 288 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 289 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 348 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 349 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 408 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 409 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgc 464
>gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mRNA, complete cds Length = 1367 Score = 143 bits (72), Expect = 7e-31 Identities = 240/296 (81%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 297 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 356 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 357 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 416 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 417 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 476 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 477 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 536 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 537 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgc 592
>emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1302 Score = 143 bits (72), Expect = 7e-31 Identities = 240/296 (81%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 277 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 336 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 337 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 396 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 397 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 456 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 457 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 516 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 517 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgc 572
>emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1265 Score = 143 bits (72), Expect = 7e-31 Identities = 240/296 (81%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 274 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 333 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 334 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 393 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 394 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 453 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 454 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 513 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 514 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgc 569
>gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, complete cds Length = 927 Score = 143 bits (72), Expect = 7e-31 Identities = 240/296 (81%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 169 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 228 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || || || || ||||||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 229 cttgatcacaactaccatgagtcaatgttccacatgttcaagagaattaatgccaaggag 288 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 289 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggatgttcac 348 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| || ||||| ||||| ||||| || || || Sbjct: 349 gcgttgttcaatggctatgttccaaatccagtcctggtcattattgatgtccagcctaaa 408 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 409 gaacttggaatccctaccaaagcatactatgcagtggaggaggttaaggagaatgc 464
>gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA, RPN8a-1 allele, complete cds Length = 1314 Score = 127 bits (64), Expect = 4e-26 Identities = 238/296 (80%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 229 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 288 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || ||||| || || |||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 289 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 348 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||| || ||| Sbjct: 349 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggacgtccat 408 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| ||| |||| ||||| ||||| ||||| || Sbjct: 409 gcgttgttcaatggctatgttccaaatccagtgttggtcattattgatgtccaacctaaa 468 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| ||||| ||||| || ||||| || || ||||| || |||||||| Sbjct: 469 gaacttggaatccccacaaaagcttactatgcagtggaggaggtcaaggagaatgc 524
>gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete sequence Length = 1368 Score = 127 bits (64), Expect = 4e-26 Identities = 238/296 (80%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 298 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 357 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || ||||| || || |||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 358 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 417 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||| || ||| Sbjct: 418 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggacgtccat 477 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| ||| |||| ||||| ||||| ||||| || Sbjct: 478 gcgttgttcaatggctatgttccaaatccagtgttggtcattattgatgtccaacctaaa 537 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| ||||| ||||| || ||||| || || ||||| || |||||||| Sbjct: 538 gaacttggaatccccacaaaagcttactatgcagtggaggaggtcaaggagaatgc 593
>gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasome subunit athMOV34 mRNA, complete cds Length = 1357 Score = 127 bits (64), Expect = 4e-26 Identities = 238/296 (80%) Strand = Plus / Plus Query: 292 gtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctggttc 351 ||||||||| ||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 260 gtcaccaacagctatgcagtgccctttgaggaggatgacaaagacccaagcatctggttt 319 Query: 352 ctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaaggag 411 || ||||| || || |||||||| |||||| |||||||||||| || || ||||||||| Sbjct: 320 cttgaccacaactatcatgagtcaatgttccacatgttcaagagaattaatgccaaggag 379 Query: 412 catgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgttcat 471 |||||||| || ||||||||||| || || ||||| ||||| || ||||| || ||| Sbjct: 380 catgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttggacgtccat 439 Query: 472 gcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaacccaag 531 || ||||| | ||||||||| ||||| ||| |||| ||||| ||||| ||||| || Sbjct: 440 gcgttgttcaatggctatgttccaaatccagtgttggtcattattgatgtccaacctaaa 499 Query: 532 gagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || | ||||| ||||| ||||| || ||||| || || ||||| || |||||||| Sbjct: 500 gaacttggaatccccacaaaagcttactatgcagtggaggaggtcaaggagaatgc 555
>ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 mRNA, complete cds Length = 1417 Score = 117 bits (59), Expect = 4e-23 Identities = 239/299 (79%) Strand = Plus / Plus Query: 289 gacgtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctgg 348 |||||||||||| |||||| ||||| ||||||||||||||||| ||| | || || ||| Sbjct: 265 gacgtcaccaacagctacgcagtgccttttgaggaggatgacaaagacacaagcatatgg 324 Query: 349 ttcctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaag 408 || || || || || ||||| ||||| ||||| |||||||||||| || || || ||| Sbjct: 325 tttcttgatcacaactaccacgagtcgatgtttcacatgttcaagagaattaatgctaag 384 Query: 409 gagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgtt 468 |||||| |||| || ||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 385 gagcatattgtgggttggtacagcacaggtcctaaacttcgagagaatgatttggatgtt 444 Query: 469 catgcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaaccc 528 || || || || | ||| ||||| ||||| ||| |||| ||||| ||||| ||||| Sbjct: 445 cacgctttattcaatggctacgttccaaatccagtgttggtcattattgatgtccaacct 504 Query: 529 aaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || || | ||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 505 aaagaacttggaatccccacaaaagcatactatgcggttgaggaggtgaaagagaatgc 563
>gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b (RPN8b) mRNA, partial cds Length = 930 Score = 117 bits (59), Expect = 4e-23 Identities = 239/299 (79%) Strand = Plus / Plus Query: 289 gacgtcaccaactcctacgccgtgccgtttgaggaggatgacaaggacccgaggatctgg 348 |||||||||||| |||||| ||||| ||||||||||||||||| ||| | || || ||| Sbjct: 166 gacgtcaccaacagctacgcagtgccttttgaggaggatgacaaagacacaagcatatgg 225 Query: 349 ttcctcgaccataattaccatgagtctatgttctccatgttcaagaggatcaacgccaag 408 || || || || || ||||| ||||| ||||| |||||||||||| || || || ||| Sbjct: 226 tttcttgatcacaactaccacgagtcgatgtttcacatgttcaagagaattaatgctaag 285 Query: 409 gagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttggatgtt 468 |||||| |||| || ||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 286 gagcatattgtgggttggtacagcacaggtcctaaacttcgagagaatgatttggatgtt 345 Query: 469 catgcattgtttaccaactatgttcctaatcctgtgctggtgattatcgatgttcaaccc 528 || || || || | ||| ||||| ||||| ||| |||| ||||| ||||| ||||| Sbjct: 346 cacgctttattcaatggctacgttccaaatccagtgttggtcattattgatgtccaacct 405 Query: 529 aaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 || || | ||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 406 aaagaacttggaatccccacaaaagcatactatgcggttgaggaggtgaaagagaatgc 464
>gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA Length = 1191 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 310 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 369 ||||| ||||||||||| |||| |||||| || || ||||| || |||||||| || ||| Sbjct: 187 gtgccctttgaggaggaggacagggaccctagtatttggtttcttgaccataactatcat 246 Query: 370 gagtctatgttctccatgttcaagaggatcaacgccaaggagcatgttgttggctggtac 429 || || ||||| ||||||||| ||||| ||||| ||||||||||||||||| ||||| Sbjct: 247 gaatcaatgttttccatgttccgtaggataaacgcaaaggagcatgttgttggttggtat 306 Query: 430 agcactggtccaaaact 446 ||||||||||| ||||| Sbjct: 307 agcactggtcccaaact 323 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 529 aaggagttgggaatacccaccaaagcatattatgctgttgaagaggttaaagagaatgc 587 |||||| | |||||||| || || ||||| ||||| ||||| || |||||||||||||| Sbjct: 406 aaggagctaggaataccaactaaggcatactatgcagttgaggaagttaaagagaatgc 464
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3 Length = 87835 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 310 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 369 ||||| ||||||||||||||||| ||||| || |||||||| || || || || |||||| Sbjct: 57169 gtgccctttgaggaggatgacaaagacccaagcatctggtttcttgatcacaactaccat 57228 Query: 370 gagtctatgttctccatgttcaagag 395 ||||| |||||| |||||||||||| Sbjct: 57229 gagtcaatgttccacatgttcaagag 57254 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 403 gccaaggagcatgttgttggctggtacagcactggtccaaaactaaaggagaacgacttg 462 ||||||||||||||||| || ||||||||||| || || ||||| ||||| || ||| Sbjct: 57345 gccaaggagcatgttgtaggttggtacagcacaggccctaaacttcgagagaatgatttg 57404 Query: 463 gatgttcatgcattgtt 479 |||||||| || ||||| Sbjct: 57405 gatgttcacgcgttgtt 57421 Score = 42.1 bits (21), Expect = 2.0 Identities = 75/93 (80%) Strand = Plus / Plus Query: 486 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagttgggaatacc 545 ||||||||| ||||| || ||||| ||||| ||||| || || || || | ||||| || Sbjct: 57612 ctatgttccaaatccagtcctggtcattattgatgtccagcctaaagaacttggaatccc 57671 Query: 546 caccaaagcatattatgctgttgaagaggttaa 578 ||||||||||| ||||| || || |||||||| Sbjct: 57672 taccaaagcatactatgcagtggaggaggttaa 57704
>emb|AJ719835.1| Gallus gallus partial mRNA for hypothetical protein, clone 7b3 Length = 1038 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 172 gtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 219 |||||||||||||||||||||||||||||| ||||||| |||| |||| Sbjct: 96 gtggtggtgcacccgctggtgctgctcagcgtcgtcgatcacttcaac 143
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 486 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagtt 536 |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 9600143 ctatgttcctaaccctgtcctggtgattattgatgttcaaccgaaggagtt 9600093
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1059D01 Length = 158792 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 486 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagtt 536 |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 107873 ctatgttcctaaccctgtcctggtgattattgatgttcaaccgaaggagtt 107823
>dbj|AP005834.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0005C24 Length = 168151 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 486 ctatgttcctaatcctgtgctggtgattatcgatgttcaacccaaggagtt 536 |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 606 ctatgttcctaaccctgtcctggtgattattgatgttcaaccgaaggagtt 556
>gb|DQ216029.1| Taeniopygia guttata clone 0064P0001A12 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 171 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 219 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 58 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 106
>gb|DQ216028.1| Taeniopygia guttata clone 0058P0011D07 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1121 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 171 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 219 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 117 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 165
>gb|DQ216027.1| Taeniopygia guttata clone 0063P0033E11 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1068 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 171 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 219 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 65 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 113
>gb|DQ216026.1| Taeniopygia guttata clone 0061P0027A07 proteasome 26S non-ATPase subunit 7-like mRNA, complete sequence Length = 1090 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 171 ggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaac 219 ||||||||||||||||||||||||||||||| |||| || |||| |||| Sbjct: 73 ggtggtggtgcacccgctggtgctgctcagcgtcgtggatcacttcaac 121
>gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete sequence Length = 28951 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 406 aaggagcatgttgttggctggtacagcactggtccaaaact 446 ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 24806 aaggagcatgttgttggttggtatagcactggtcccaaact 24846 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 310 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 369 ||||| ||||||||||| || | |||||| | |||||||| || |||||||| || ||| Sbjct: 24615 gtgccctttgaggaggaggagagggaccctggtatctggtttcttgaccataactatcat 24674 Query: 370 gagtctatgttctccatgttc 390 || || ||||| ||||||||| Sbjct: 24675 gaatcgatgttttccatgttc 24695
>ref|XM_320392.2| Anopheles gambiae str. PEST ENSANGP00000013949 (ENSANGG00000011460), partial mRNA Length = 977 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 169 aaggtggtggtgcacccgctggtgctgctcagcatcgtcgaccactacaaccg 221 |||||| | |||||||||||||||||||||||| | || ||||||| |||||| Sbjct: 150 aaggtgatcgtgcacccgctggtgctgctcagcgtggtggaccacttcaaccg 202
>dbj|AB225523.1| Aspergillus oryzae cDNA, contig sequence: AoEST2376 Length = 579 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 496 aatcctgtgctggtgattatcgatgttcaacccaaggag 534 |||||| ||||||||||| ||||||||||||| |||||| Sbjct: 502 aatcctttgctggtgattgtcgatgttcaaccaaaggag 540
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 496 aatcctgtgctggtgattatcgatgttcaacccaaggag 534 |||||| ||||||||||| ||||||||||||| |||||| Sbjct: 2599584 aatcctttgctggtgattgtcgatgttcaaccaaaggag 2599622
>ref|XM_511103.1| PREDICTED: Pan troglodytes similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog) (LOC454240), mRNA Length = 1890 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 380 agaaggtggtggtccaccccctggtgctgctcag 413
>ref|NM_002811.3| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) (PSMD7), mRNA Length = 1678 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 152 agaaggtggtggtccaccccctggtgctgctcag 185
>gb|BC012606.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone MGC:13607 IMAGE:4334058), complete cds Length = 1175 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 141 agaaggtggtggtccaccccctggtgctgctcag 174
>gb|BC013513.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, mRNA (cDNA clone IMAGE:4235236), with apparent retained intron Length = 1036 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 132 agaaggtggtggttcaccccctggtgctgctcag 165
>gb|AY126304.1| Mus musculus isolate 0126.HH59 M-MuLV retroviral integration site Length = 453 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 172 agaaggtggtggttcaccccctggtgctgctcag 139
>gb|BC000338.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone IMAGE:2822691), partial cds Length = 1107 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 147 agaaggtggtggtccaccccctggtgctgctcag 180
>gb|BC103437.1| Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog), mRNA (cDNA clone MGC:128537 IMAGE:7985023), complete cds Length = 1135 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 128 agaaggtggtggtccaccccctggtgctgctcag 161
>emb|CR620737.1| full-length cDNA clone CS0DF037YG19 of Fetal brain of Homo sapiens (human) Length = 1568 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 104 agaaggtggtggtccaccccctggtgctgctcag 137
>emb|CR616820.1| full-length cDNA clone CS0DG002YN14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1599 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 93 agaaggtggtggtccaccccctggtgctgctcag 126
>emb|CR601507.1| full-length cDNA clone CS0DI083YB17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 994 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 80 agaaggtggtggtccaccccctggtgctgctcag 113
>emb|CR600117.1| full-length cDNA clone CS0DH004YP16 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1588 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 88 agaaggtggtggtccaccccctggtgctgctcag 121
>emb|CR599542.1| full-length cDNA clone CS0DA004YM20 of Neuroblastoma of Homo sapiens (human) Length = 1597 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 102 agaaggtggtggtccaccccctggtgctgctcag 135
>emb|CR597005.1| full-length cDNA clone CS0DA004YG14 of Neuroblastoma of Homo sapiens (human) Length = 1585 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 91 agaaggtggtggtccaccccctggtgctgctcag 124
>emb|CR595724.1| full-length cDNA clone CS0DJ012YF02 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1584 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 91 agaaggtggtggtccaccccctggtgctgctcag 124
>dbj|AK146128.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730007F24 product:Warning: possibly chimeric clone, full insert sequence Length = 2324 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 98 agaaggtggtggttcaccccctggtgctgctcag 131
>dbj|AK159825.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420032C16 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 1090 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 102 agaaggtggtggttcaccccctggtgctgctcag 135
>dbj|AK158379.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930111J18 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 861 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 127 agaaggtggtggttcaccccctggtgctgctcag 160
>dbj|AK012463.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700060P05 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 850 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 115 agaaggtggtggttcaccccctggtgctgctcag 148
>dbj|AK031013.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830490F08 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 7, full insert sequence Length = 1017 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 101 agaaggtggtggttcaccccctggtgctgctcag 134
>gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484E3, complete sequence Length = 195342 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 166162 agaaggtggtggtccaccccctggtgctgctcag 166195
>dbj|D50063.1|HUMP40MOV Homo sapiens mRNA for proteasome subunit p40 / Mov34 protein, complete cds Length = 1602 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 103 agaaggtggtggtccaccccctggtgctgctcag 136
>gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, complete sequence Length = 142427 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 79152 agaaggtggtggttcaccccctggtgctgctcag 79185
>ref|NM_010817.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Psmd7), mRNA Length = 1599 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 150 agaaggtggtggttcaccccctggtgctgctcag 183
>ref|NM_001034423.1| Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) (PSMD7), mRNA Length = 1135 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 128 agaaggtggtggtccaccccctggtgctgctcag 161
>gb|M64634.1|MUSMOV341 Mouse Mov-34 36 kD protein gene, exon 1 Length = 852 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 441 agaaggtggtggttcaccccctggtgctgctcag 474
>gb|M64641.1|MUSMOV34 Mouse Mov-34 protein mRNA, complete cds Length = 1547 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 ||||||||||||| ||||| |||||||||||||| Sbjct: 98 agaaggtggtggttcaccccctggtgctgctcag 131
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148, complete sequence Length = 106000 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 166 gagaaggtggtggtgcacccgctggtgct 194 |||||||||||||| |||||||||||||| Sbjct: 66609 gagaaggtggtggttcacccgctggtgct 66581
>ref|XM_503049.1| Yarrowia lipolytica CLIB122, YALI0D19910g predicted mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 384 catgttcaagaggatcaacgccaagga 410 ||||||||||| ||||||||||||||| Sbjct: 294 catgttcaagaagatcaacgccaagga 320
>gb|AY609436.1| Sus scrofa clone Clu_11484.scr.msk.p1.Contig1, mRNA sequence Length = 1608 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgct 197 ||||||||||||| ||||| ||||||||||| Sbjct: 105 agaaggtggtggtccaccccctggtgctgct 135
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 384 catgttcaagaggatcaacgccaagga 410 ||||||||||| ||||||||||||||| Sbjct: 2516688 catgttcaagaagatcaacgccaagga 2516714
>ref|NM_196387.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0044A10.3), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 ggaggagaggggaggagatgga 128 |||||||||||||||||||||| Sbjct: 87 ggaggagaggggaggagatgga 66
>ref|XM_468697.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 1206 gtcgtcggcgtcctcctcggctcctcctcc 1177
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 65894 gtcgtcggcgtcctcctcggctcctcctcc 65865
>ref|XM_458621.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D04235g) partial mRNA Length = 963 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 460 ttggatgttcatgcattgtttaccaa 485 ||||| |||||||||||||||||||| Sbjct: 801 ttggaggttcatgcattgtttaccaa 826
>gb|DQ196343.1| Homo sapiens prostate cancer antigen-1 (DEPC1) gene, complete cds Length = 43337 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 gctggagaaggtggtggtgcac 183 |||||||||||||||||||||| Sbjct: 20626 gctggagaaggtggtggtgcac 20605
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 17099496 gtcgtcggcgtcctcctcggctcctcctcc 17099467
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 130242 gtcgtcggcgtcctcctcggctcctcctcc 130213
>ref|XM_381155.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG00979.1) partial mRNA Length = 1479 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 149 tgtcggggcggacgctggagaaggtggtgg 178 |||||||||||||| |||||||| |||||| Sbjct: 1165 tgtcggggcggacgttggagaagatggtgg 1136
>ref|XM_858060.1| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein), transcript variant 2 (LOC479671), mRNA Length = 525 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 |||||||||| || ||||| |||||||||||||| Sbjct: 67 agaaggtggtcgttcaccccctggtgctgctcag 100
>ref|XM_536802.2| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein), transcript variant 1 (LOC479671), mRNA Length = 1547 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 |||||||||| || ||||| |||||||||||||| Sbjct: 91 agaaggtggtcgttcaccccctggtgctgctcag 124
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 ttggatgttcatgcattgtttaccaa 485 ||||| |||||||||||||||||||| Sbjct: 302320 ttggaggttcatgcattgtttaccaa 302295
>gb|AC087521.10| Homo sapiens chromosome 11, clone RP11-613D13, complete sequence Length = 188967 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 gctggagaaggtggtggtgcac 183 |||||||||||||||||||||| Sbjct: 64198 gctggagaaggtggtggtgcac 64219
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0044A10, from chromosome 10, complete sequence Length = 169270 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 ggaggagaggggaggagatgga 128 |||||||||||||||||||||| Sbjct: 4590 ggaggagaggggaggagatgga 4569
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 ggaggagaggggaggagatgga 128 |||||||||||||||||||||| Sbjct: 13049071 ggaggagaggggaggagatgga 13049050
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 17093065 gtcgtcggcgtcctcctcggctcctcctcc 17093036
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 37294022 gtcgtcggcgtcctcctcggctcctcctcc 37293993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatgg 127 ||||||||||||||||||||| Sbjct: 22238451 ggaggagaggggaggagatgg 22238471
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 44.1 bits (22), Expect = 0.51 Identities = 70/86 (81%) Strand = Plus / Plus Query: 310 gtgccgtttgaggaggatgacaaggacccgaggatctggttcctcgaccataattaccat 369 ||||| ||||||||||||||||| ||| | || || ||||| || || || || ||||| Sbjct: 66731 gtgccttttgaggaggatgacaaagacacaagcatatggtttcttgatcacaactaccac 66790 Query: 370 gagtctatgttctccatgttcaagag 395 ||||| ||||| |||||||||||| Sbjct: 66791 gagtcgatgtttcacatgttcaagag 66816 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 406 aaggagcatgttgttggctggtacagcactggtccaaaact 446 ||||||||| |||| || ||||||||||| ||||| ||||| Sbjct: 66907 aaggagcatattgtgggttggtacagcacaggtcctaaact 66947
>ref|XM_226439.3| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (predicted) (Psmd7_predicted), mRNA Length = 1668 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 167 agaaggtggtggtgcacccgctggtgctgctcag 200 |||| |||||||| ||||| |||||||||||||| Sbjct: 230 agaaagtggtggtccaccccctggtgctgctcag 263
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 6056 gtcgtcggcgtcctcctcggctcctcctcc 6027
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 131011 gtcgtcggcgtcctcctcggctcctcctcc 130982
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 ggaggagaggggaggagatgga 128 |||||||||||||||||||||| Sbjct: 13056411 ggaggagaggggaggagatgga 13056390
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gtcgtcggcgtgctcctcggcacctcctcc 276 ||||||||||| ||||||||| |||||||| Sbjct: 1931959 gtcgtcggcgtcctcctcggctcctcctcc 1931930 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 17370244 gaggagaggggaggagatgg 17370263
>gb|AC132249.3| Mus musculus BAC clone RP24-434O21 from chromosome 6, complete sequence Length = 180332 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatgg 127 ||||||||||||||||||||| Sbjct: 166233 ggaggagaggggaggagatgg 166253
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ggagaaggtggtggtgcacccgctg 189 ||||||||||||||||||| ||||| Sbjct: 81958 ggagaaggtggtggtgcacgcgctg 81934
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ggagaaggtggtggtgcacccgctg 189 ||||||||||||||||||| ||||| Sbjct: 37788 ggagaaggtggtggtgcacgcgctg 37812
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatgg 127 ||||||||||||||||||||| Sbjct: 20403 ggaggagaggggaggagatgg 20423
>gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, complete sequence Length = 139560 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ggaggagaggggaggagatgg 127 ||||||||||||||||||||| Sbjct: 30172 ggaggagaggggaggagatgg 30152
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatgg 127 ||||||||||||||||||||| Sbjct: 20930 ggaggagaggggaggagatgg 20950
>gb|AC154024.2| Mus musculus 6 BAC RP24-137K15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173257 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatgg 127 ||||||||||||||||||||| Sbjct: 32722 ggaggagaggggaggagatgg 32742
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 gtggtgaaggcggcgcagctgtcgg 154 ||||||| ||||||||||||||||| Sbjct: 172371 gtggtgacggcggcgcagctgtcgg 172347
>emb|AL806521.9| Mouse DNA sequence from clone RP23-385N7 on chromosome 4, complete sequence Length = 187066 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 cgccggaggagaggggaggag 123 ||||||||||||||||||||| Sbjct: 159337 cgccggaggagaggggaggag 159317
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 5316 gaggagaggggaggagatgg 5335
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 31298 gaggagaggggaggagatgg 31317
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcgcccgcgacacccgga 241 |||||||||||||||||||| Sbjct: 2482322 cgtcgcccgcgacacccgga 2482303
>gb|AC141927.3| Mus musculus BAC clone RP23-237F16 from chromosome 6, complete sequence Length = 186452 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 gccggaggagaggggaggagatgg 127 |||||||||||||||||| ||||| Sbjct: 57269 gccggaggagaggggaggtgatgg 57292
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gctgtcggggcggacgctgg 166 |||||||||||||||||||| Sbjct: 924626 gctgtcggggcggacgctgg 924607 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gctgtcggggcggacgctgg 166 |||||||||||||||||||| Sbjct: 897841 gctgtcggggcggacgctgg 897822
>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence Length = 221436 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 70996 gaggagaggggaggagatgg 71015
>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene, partial cds Length = 2020 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gcggcgcagctgtcggggcggacg 162 |||||||||||| ||||||||||| Sbjct: 1800 gcggcgcagctgccggggcggacg 1823
>ref|XM_390914.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10738.1) partial mRNA Length = 1035 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 gaggaggatgacaaggaccc 338 |||||||||||||||||||| Sbjct: 196 gaggaggatgacaaggaccc 215
>gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosome 15, complete sequence Length = 193321 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 59692 gaggagaggggaggagatgg 59673
>emb|AJ621049.1| Bos taurus partial mRNA for L-type voltage-gated calcium channel alpha 1S subunit (caV1.1 gene) Length = 489 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 acccgaggatctggttcctc 354 |||||||||||||||||||| Sbjct: 130 acccgaggatctggttcctc 111
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcgcccgcgacacccgga 241 |||||||||||||||||||| Sbjct: 60206 cgtcgcccgcgacacccgga 60187
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gctgtcggggcggacgctgg 166 |||||||||||||||||||| Sbjct: 2243349 gctgtcggggcggacgctgg 2243330 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gctgtcggggcggacgctgg 166 |||||||||||||||||||| Sbjct: 2216498 gctgtcggggcggacgctgg 2216479
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgtcgcccgcgacacccgga 241 |||||||||||||||||||| Sbjct: 259192 cgtcgcccgcgacacccgga 259173
>gb|AE006017.1| Caulobacter crescentus CB15 section 343 of 359 of the complete genome Length = 10135 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 agcgcgtcgtcggcgtgctcctcg 265 ||||||||||||||||| |||||| Sbjct: 3724 agcgcgtcgtcggcgtgatcctcg 3701
>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence Length = 206320 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatg 126 |||||||||||||||||||| Sbjct: 202786 ggaggagaggggaggagatg 202805
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 ttcctaatcctgtgctggtg 510 |||||||||||||||||||| Sbjct: 1476243 ttcctaatcctgtgctggtg 1476224
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gctgtcggggcggacgctgg 166 |||||||||||||||||||| Sbjct: 1789922 gctgtcggggcggacgctgg 1789903
>gb|AC148659.1| Macaca mulatta Major Histocompatibility Complex BAC MMU005H07, complete sequence Length = 174766 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gctcctcggcacctcctcccgcgg 281 ||||||||||||| |||||||||| Sbjct: 144645 gctcctcggcaccccctcccgcgg 144622
>gb|AC161938.2| Mus musculus 6 BAC RP24-162E3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163330 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 gccggaggagaggggaggagatgg 127 |||||||||||||||||| ||||| Sbjct: 59502 gccggaggagaggggaggtgatgg 59479
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 cctcctcccgcggcgtcgtcgacg 292 |||||||||||||||||| ||||| Sbjct: 10256429 cctcctcccgcggcgtcgacgacg 10256406
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 17276598 gaggagaggggaggagatgg 17276617
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 6043639 gaggagaggggaggagatgg 6043620
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gagaggggaggagatggacg 130 |||||||||||||||||||| Sbjct: 868713 gagaggggaggagatggacg 868732
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatg 126 |||||||||||||||||||| Sbjct: 19597036 ggaggagaggggaggagatg 19597055
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 gctcctcggcacctcctcccgcgg 281 ||||||||||||| |||||||||| Sbjct: 1740961 gctcctcggcaccccctcccgcgg 1740984
>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence Length = 203200 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 166859 gaggagaggggaggagatgg 166840
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gctggagaaggtggtggtgc 181 |||||||||||||||||||| Sbjct: 1169319 gctggagaaggtggtggtgc 1169338
>gb|AC132808.2| Homo sapiens chromosome 3 clone RP11-794P9, complete sequence Length = 195741 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ggaggagaggggaggagatg 126 |||||||||||||||||||| Sbjct: 123254 ggaggagaggggaggagatg 123235
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gagaggggaggagatggacg 130 |||||||||||||||||||| Sbjct: 151847 gagaggggaggagatggacg 151866
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 aaggcggcgcagctgtcggg 155 |||||||||||||||||||| Sbjct: 4547184 aaggcggcgcagctgtcggg 4547165
>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) Length = 11618 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gagaggggaggagatggacg 130 |||||||||||||||||||| Sbjct: 788 gagaggggaggagatggacg 807
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gagaggggaggagatggacg 130 |||||||||||||||||||| Sbjct: 49608 gagaggggaggagatggacg 49627
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 94451 gaggagaggggaggagatgg 94432
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ggaggagaggggaggagatg 126 |||||||||||||||||||| Sbjct: 63322 ggaggagaggggaggagatg 63341
>dbj|AK099846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109F13, full insert sequence Length = 2864 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 cctcctcccgcggcgtcgtcgacg 292 |||||||||||||||||| ||||| Sbjct: 35 cctcctcccgcggcgtcgacgacg 58
>ref|NM_212261.1| Eremothecium gossypii AFR578Cp (AFR578C), mRNA Length = 1878 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 ttcctaatcctgtgctggtg 510 |||||||||||||||||||| Sbjct: 484 ttcctaatcctgtgctggtg 503
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ctacaaccgcgtcgcccgcg 232 |||||||||||||||||||| Sbjct: 221612 ctacaaccgcgtcgcccgcg 221593
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 acccgctggtgctgctcagcatcgtcga 209 ||||||||||||||||| |||| ||||| Sbjct: 5741651 acccgctggtgctgctcggcatagtcga 5741678
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gctggtgctgctcagcatcg 205 |||||||||||||||||||| Sbjct: 76895 gctggtgctgctcagcatcg 76914
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 cctcctcccgcggcgtcgtcgacg 292 |||||||||||||||||| ||||| Sbjct: 10256311 cctcctcccgcggcgtcgacgacg 10256288
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 cctcctcccgcggcgtcgtcgacg 292 |||||||||||||||||| ||||| Sbjct: 19348 cctcctcccgcggcgtcgacgacg 19325
>gb|AC147224.5| Mus musculus BAC clone RP23-101E7 from 15, complete sequence Length = 201924 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gaggagaggggaggagatgg 127 |||||||||||||||||||| Sbjct: 58683 gaggagaggggaggagatgg 58702
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgtcggcgtgctcctcggca 268 |||||||||||||||||||| Sbjct: 659840 cgtcggcgtgctcctcggca 659821
>emb|X76753.2|HSSTGEX1 Homo sapiens HG 5-HTT gene for serotonin transporter, exon 1 Length = 3695 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ggagaggggaggagatggac 129 |||||||||||||||||||| Sbjct: 979 ggagaggggaggagatggac 998 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,165,088 Number of Sequences: 3902068 Number of extensions: 4165088 Number of successful extensions: 100154 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97991 Number of HSP's gapped (non-prelim): 2153 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
