ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart34h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NLTP_AMACA (P80450) Nonspecific lipid-transfer protein (LTP) (Ph... 35 0.11
2NLTP1_AMAHP (P83167) Nonspecific lipid-transfer protein 1 (LTP 1... 35 0.11
3BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor 34 0.31
4NLTP_VIGUN (Q43681) Probable nonspecific lipid-transfer protein ... 33 0.52
5ADA32_MOUSE (Q8K410) ADAM 32 precursor (A disintegrin and metall... 30 5.8
6K1045_PONPY (Q5R4R7) Protein KIAA1045 homolog 30 5.8
7K1045_HUMAN (Q9UPV7) Protein KIAA1045 30 5.8
8PKD2_MOUSE (O35245) Polycystin-2 29 9.9

>NLTP_AMACA (P80450) Nonspecific lipid-transfer protein (LTP) (Phospholipid|
           transfer protein) (PLTP)
          Length = 94

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = +2

Query: 182 TPACASKLVG-CASSMNGTDAEKPPETCCGPLRD-------AVKNERACLCALYASPEIF 337
           T    +K +G C + + GT A  PP  CC  +R              AC C   A+    
Sbjct: 3   TCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQ--- 59

Query: 338 KAFNINVTDALRLSKRCGV 394
           K  ++N   A RL+ +CGV
Sbjct: 60  KTKSLNYKVAARLASQCGV 78



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>NLTP1_AMAHP (P83167) Nonspecific lipid-transfer protein 1 (LTP 1) (NS-LTP1)|
          Length = 94

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = +2

Query: 182 TPACASKLVG-CASSMNGTDAEKPPETCCGPLRD-------AVKNERACLCALYASPEIF 337
           T    +K +G C + + GT A  PP  CC  +R              AC C   A+    
Sbjct: 3   TCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQ--- 59

Query: 338 KAFNINVTDALRLSKRCGV 394
           K  ++N   A RL+ +CGV
Sbjct: 60  KTKSLNYKVAARLASQCGV 78



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>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 185  PACASKLVGCASSMNGTDAEKPPETCCGPLRDAVKNERACLC 310
            P C +K + C  +     A +PP   CGP R   K + AC C
Sbjct: 1532 PGCGAKKIWCQETCKCECASEPPRMGCGPNRYWDKEDCACQC 1573



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>NLTP_VIGUN (Q43681) Probable nonspecific lipid-transfer protein AKCS9|
           precursor (LTP)
          Length = 99

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +2

Query: 197 SKLVGCASSMNGTDAEKPPETCCGPLRDAVKNERACLCALYASPEIFKAFNINVTDALRL 376
           ++L  C  ++ G    KP  TCC  L    K +  CLC    +P + +   +N   A ++
Sbjct: 37  TELSSCVPAITG--GSKPSSTCCSKL----KVQEPCLCNYIKNPSLKQ--YVNSPGAKKV 88

Query: 377 SKRCGVT 397
              CGVT
Sbjct: 89  LSNCGVT 95



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>ADA32_MOUSE (Q8K410) ADAM 32 precursor (A disintegrin and metalloprotease|
           domain 32)
          Length = 750

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 230 GTDAEKPPETCCGPLRDAVKNERAC 304
           G++AE  P++CC P R  +K  RAC
Sbjct: 404 GSEAECGPDSCCEPNRCVLKAGRAC 428



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>K1045_PONPY (Q5R4R7) Protein KIAA1045 homolog|
          Length = 400

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 236 DAEKPPETCCGPLRDAVKNERACLCALYASPEIF 337
           D +KPPE C  P    V +E   +C ++ +  +F
Sbjct: 112 DDDKPPEICLEPREPVVNDEMCDVCEVWTAESLF 145



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>K1045_HUMAN (Q9UPV7) Protein KIAA1045|
          Length = 400

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 236 DAEKPPETCCGPLRDAVKNERACLCALYASPEIF 337
           D +KPPE C  P    V +E   +C ++ +  +F
Sbjct: 112 DDDKPPEICLEPREPVVNDEMCDVCEVWTAESLF 145



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>PKD2_MOUSE (O35245) Polycystin-2|
          Length = 966

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 370 PPLQALRRHRGRQQLPQHLSDELSSRFKFFSIRWQERRAPY 492
           P L+ LR   G   +PQ L DE+   +  +S+   E RAP+
Sbjct: 317 PRLRQLRVRNGSCSIPQDLRDEIKECYDVYSVS-SEDRAPF 356


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,864,002
Number of Sequences: 219361
Number of extensions: 681577
Number of successful extensions: 2530
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2530
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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