>gb|AY106401.1| Zea mays PCO137523 mRNA sequence
          Length = 949

 Score =  129 bits (65), Expect = 1e-26
 Identities = 125/145 (86%)
 Strand = Plus / Plus

                                                                       
Query: 247 gccgccggagacctgctgcggcccgctgagggacgccgtcaagaacgagcgggcctgcct 306
           ||||||||| ||||||||||||||||| | |||||||||||||||||| |     |||||
Sbjct: 291 gccgccggacacctgctgcggcccgctcaaggacgccgtcaagaacgacctcaagtgcct 350

                                                                       
Query: 307 ctgcgcgctctacgcctcgccggagatcttcaaggccttcaacatcaacgtcaccgacgc 366
           |||||  ||||||||| |||||||||||||||||||||||||||||| | ||  ||| ||
Sbjct: 351 ctgcgatctctacgccacgccggagatcttcaaggccttcaacatcagcctcgacgaggc 410

                                    
Query: 367 gctccgcctctccaagcgctgcggc 391
            ||| ||||||||||||| ||||||
Sbjct: 411 cctcggcctctccaagcgttgcggc 435

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 6e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                            
Query: 302      tgcctctgcgcgctctacgcctcgccggagatcttcaaggccttcaacatcaacgtcacc 361
                ||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 28234123 tgcctctgcgacctctacgcctcgccggagatcttcaaggccttcaacatcaacatctcc 28234182

                                              
Query: 362      gacgcgctccgcctctccaagcgctgcggc 391
                ||||| ||||||||||||| ||| ||||||
Sbjct: 28234183 gacgccctccgcctctccacgcggtgcggc 28234212

>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0623A10
          Length = 156517

 Score =  123 bits (62), Expect = 6e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                         
Query: 302   tgcctctgcgcgctctacgcctcgccggagatcttcaaggccttcaacatcaacgtcacc 361
             ||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 32152 tgcctctgcgacctctacgcctcgccggagatcttcaaggccttcaacatcaacatctcc 32211

                                           
Query: 362   gacgcgctccgcctctccaagcgctgcggc 391
             ||||| ||||||||||||| ||| ||||||
Sbjct: 32212 gacgccctccgcctctccacgcggtgcggc 32241

>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0009H10
          Length = 175754

 Score =  123 bits (62), Expect = 6e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                          
Query: 302    tgcctctgcgcgctctacgcctcgccggagatcttcaaggccttcaacatcaacgtcacc 361
              ||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 165029 tgcctctgcgacctctacgcctcgccggagatcttcaaggccttcaacatcaacatctcc 165088

                                            
Query: 362    gacgcgctccgcctctccaagcgctgcggc 391
              ||||| ||||||||||||| ||| ||||||
Sbjct: 165089 gacgccctccgcctctccacgcggtgcggc 165118

>dbj|AK069702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026H03, full
           insert sequence
          Length = 1798

 Score =  123 bits (62), Expect = 6e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                       
Query: 302 tgcctctgcgcgctctacgcctcgccggagatcttcaaggccttcaacatcaacgtcacc 361
           ||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 tgcctctgcgacctctacgcctcgccggagatcttcaaggccttcaacatcaacatctcc 364

                                         
Query: 362 gacgcgctccgcctctccaagcgctgcggc 391
           ||||| ||||||||||||| ||| ||||||
Sbjct: 365 gacgccctccgcctctccacgcggtgcggc 394

>dbj|AK063215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D11, full
           insert sequence
          Length = 669

 Score =  123 bits (62), Expect = 6e-25
 Identities = 83/90 (92%)
 Strand = Plus / Plus

                                                                       
Query: 302 tgcctctgcgcgctctacgcctcgccggagatcttcaaggccttcaacatcaacgtcacc 361
           ||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 330 tgcctctgcgacctctacgcctcgccggagatcttcaaggccttcaacatcaacatctcc 389

                                         
Query: 362 gacgcgctccgcctctccaagcgctgcggc 391
           ||||| ||||||||||||| ||| ||||||
Sbjct: 390 gacgccctccgcctctccacgcggtgcggc 419

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 324     cgccggagatcttcaaggccttcaac 349
               ||||||||||| ||||||||||||||
Sbjct: 1431265 cgccggagatcctcaaggccttcaac 1431290

>ref|XM_479274.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 273 tgagggacgccgtcaagaacg 293
           |||||||||||||||||||||
Sbjct: 155 tgagggacgccgtcaagaacg 175

>gb|AY785158.1| Sus scrofa telomerase reverse transcriptase mRNA, partial cds
          Length = 1842

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 cggcccgctgagggacgccgt 285
           |||||||||||||||||||||
Sbjct: 816 cggcccgctgagggacgccgt 836

>ref|XM_417943.1| PREDICTED: Gallus gallus similar to Shaw-related voltage-gated
           potassium channel protein 4 isoform a; voltage-gated
           potassium channel protein KV3.4 (LOC419806), mRNA
          Length = 1788

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 339 aggccttcaacatcaacgtca 359
           |||||||||||||||||||||
Sbjct: 614 aggccttcaacatcaacgtca 634

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 273      tgagggacgccgtcaagaacg 293
                |||||||||||||||||||||
Sbjct: 26504600 tgagggacgccgtcaagaacg 26504580

>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1340_C08
          Length = 192167

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 273   tgagggacgccgtcaagaacg 293
             |||||||||||||||||||||
Sbjct: 49871 tgagggacgccgtcaagaacg 49851

>tpe|BN000634.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx105 gene
           for class III peroxidase 105 precursor, exon 1
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 273 tgagggacgccgtcaagaacg 293
           |||||||||||||||||||||
Sbjct: 155 tgagggacgccgtcaagaacg 175

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 179     ggcacgccggcgtgcgcgtcc 199
               |||||||||||||||||||||
Sbjct: 2150153 ggcacgccggcgtgcgcgtcc 2150173

>gb|AC022342.3| Drosophila melanogaster clone BACR33N21, complete sequence
          Length = 179839

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   cgaggacgtcagcagctgcc 416
             ||||||||||||||||||||
Sbjct: 82366 cgaggacgtcagcagctgcc 82347

>gb|DQ145546.1| Sinorhizobium meliloti plasmid pSmeSM11a, complete sequence
          Length = 144170

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   gagaagccgccggagacctg 261
             ||||||||||||||||||||
Sbjct: 29743 gagaagccgccggagacctg 29762

>gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complete sequence
          Length = 206324

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 521    agcctgttcctggtcctgtggtct 544
              ||||||||||||||| ||||||||
Sbjct: 178609 agcctgttcctggtcatgtggtct 178586

>gb|AC105586.5| Rattus norvegicus 3 BAC CH230-239D4 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 235468

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    cgtggggctgatgagcctgt 527
              ||||||||||||||||||||
Sbjct: 171924 cgtggggctgatgagcctgt 171905

>gb|AY515314.1| Stichococcus bacillaris KCBP-like kinesin gene, partial cds
          Length = 6921

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  gacctgctgcggcccgctga 275
            ||||||||||||||||||||
Sbjct: 5177 gacctgctgcggcccgctga 5196

>gb|AC016168.18| Homo sapiens chromosome 17, clone RP11-87G24, complete sequence
          Length = 193537

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    ttcctggtcctgtggtctgc 546
              ||||||||||||||||||||
Sbjct: 135658 ttcctggtcctgtggtctgc 135639

>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    ctcgccggagatcttcaagg 341
              ||||||||||||||||||||
Sbjct: 779549 ctcgccggagatcttcaagg 779530

>emb|AL844855.15| Mouse DNA sequence from clone RP23-113K9 on chromosome 2, complete
             sequence
          Length = 221545

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   cagcagctgccccagcacct 425
             ||||||||||||||||||||
Sbjct: 16608 cagcagctgccccagcacct 16627

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     aacgtcaccgacgcgctccg 372
               ||||||||||||||||||||
Sbjct: 1089039 aacgtcaccgacgcgctccg 1089058

>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete
              sequence
          Length = 314743

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    cgaggacgtcagcagctgcc 416
              ||||||||||||||||||||
Sbjct: 228743 cgaggacgtcagcagctgcc 228724

>gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940143D9, complete sequence
          Length = 118759

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ccgtcaagaacgagcgggcc 301
            ||||||||||||||||||||
Sbjct: 2282 ccgtcaagaacgagcgggcc 2263

>gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940139D9, complete sequence
          Length = 118752

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ccgtcaagaacgagcgggcc 301
            ||||||||||||||||||||
Sbjct: 2282 ccgtcaagaacgagcgggcc 2263

>emb|AL844577.3| Mouse DNA sequence from clone RP23-129P1 on chromosome 2, complete
              sequence
          Length = 204516

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 521    agcctgttcctggtcctgtggtct 544
              ||||||||||||||| ||||||||
Sbjct: 103655 agcctgttcctggtcatgtggtct 103678

>gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940124D9, complete sequence
          Length = 118889

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccgtcaagaacgagcgggcc 301
              ||||||||||||||||||||
Sbjct: 116477 ccgtcaagaacgagcgggcc 116496


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,197,649
Number of Sequences: 3902068
Number of extensions: 3197649
Number of successful extensions: 61557
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61247
Number of HSP's gapped (non-prelim): 310
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)