Clone Name | bart34h03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggccgtcatgctcagcacgtg 165 ||||||||||||||||||||| Sbjct: 96294 ggccgtcatgctcagcacgtg 96274
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggccgtcatgctcagcacgtg 165 ||||||||||||||||||||| Sbjct: 68380 ggccgtcatgctcagcacgtg 68360
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 ccgaccgtgcccactgcgccg 511 ||||||||||||||||||||| Sbjct: 2844824 ccgaccgtgcccactgcgccg 2844844
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggccgtcatgctcagcacgtg 165 ||||||||||||||||||||| Sbjct: 15982629 ggccgtcatgctcagcacgtg 15982609
>gb|AY396707.1| Carludovica palmata phytochrome C (PHYC) gene, partial cds Length = 1182 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 gctcctcatggccgtcatgctcag 159 |||||||||||| ||||||||||| Sbjct: 415 gctcctcatggctgtcatgctcag 438
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 gctgccggcagtacccggcg 482 |||||||||||||||||||| Sbjct: 1929449 gctgccggcagtacccggcg 1929468
>ref|XM_359635.1| Magnaporthe grisea 70-15 hypothetical protein (MG05142.4) partial mRNA Length = 3891 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgcgcgcgcccatggcttcc 109 |||||||||||||||||||| Sbjct: 1509 cgcgcgcgcccatggcttcc 1528
>gb|AY425113.1| Hypericum empetrifolium PHYC (PHYC) gene, partial cds Length = 1177 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 gctcctcatggccgtcatgctcag 159 |||||||||||| ||||||||||| Sbjct: 415 gctcctcatggctgtcatgctcag 438
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gcgcgcctcctcgccgacgt 192 |||||||||||||||||||| Sbjct: 246316 gcgcgcctcctcgccgacgt 246335
>gb|DQ098104.1| Rhodococcus aetherivorans strain I24 putative benzaldehyde dehydrogenase gene, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcctcgccgacgtccccgcc 199 |||||||||||||||||||| Sbjct: 1097 tcctcgccgacgtccccgcc 1116
>gb|AF276721.1|AF276721 Dioscorea elephantipes phytochrome C (PHYC) gene, partial cds Length = 1388 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 gctcctcatggccgtcatgctcag 159 |||||||||||| ||||||||||| Sbjct: 469 gctcctcatggctgtcatgctcag 492
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 tgccgtccgtccccggcgtg 577 |||||||||||||||||||| Sbjct: 7113235 tgccgtccgtccccggcgtg 7113216
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 gtgccgacggtgccgctgcc 468 |||||||||||||||||||| Sbjct: 1522643 gtgccgacggtgccgctgcc 1522624
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 184 cgccgacgtccccgccttgcccataccgacgctgcc 219 |||||||| | ||||||||||||| ||| ||||||| Sbjct: 78776 cgccgacgccaccgccttgcccatgccgccgctgcc 78811 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,180,841 Number of Sequences: 3902068 Number of extensions: 3180841 Number of successful extensions: 92416 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91795 Number of HSP's gapped (non-prelim): 621 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)