Clone Name | bart34h02 |
---|---|
Clone Library Name | barley_pub |
>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)| Length = 332 Score = 37.4 bits (85), Expect = 0.030 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 3/129 (2%) Frame = +1 Query: 16 ANHEDDPNKATMTYGSEQEDDPHKVTMSYRANQEVDPNKVTSSYGPGHEEYTNRITLSDV 195 A+H + A + D H T ++ A+ D + T ++ + + Sbjct: 195 AHHAAYAHHAHHAADAHHAADAHHATDAHHAHHAADAHHATDAHHAADAHHAADAHHATD 254 Query: 196 SEHEDDPNKATMSYGSKDE---VDPNKATMSYKLKHGNDLKTVSTGHKTHIEGEASHHVP 366 + H D + AT ++ + D D + AT S+ H D + H T A+HH Sbjct: 255 AHHAADAHHATDAHHAADAHHAADAHHATDSHHAHHAADAHHAAAHHATDAHHAAAHHAT 314 Query: 367 SHSHKNKRH 393 H H Sbjct: 315 DAHHAAAHH 323
>SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 699 Score = 35.8 bits (81), Expect = 0.087 Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 5/128 (3%) Frame = +1 Query: 22 HEDDPNKATMTYGSEQEDDPHKVTMSYRANQEVDPNKVTSSYGPGHEEYTNRITLSDVSE 201 HE+D + + +DD V++ YR ++ G G EE DVS+ Sbjct: 243 HEEDDDDDD---DDDDDDDDDDVSIEYR-------HQAHRHQGHGIEED------EDVSD 286 Query: 202 --HEDDPNKATMSYGSKDEVDPNKATMSYKLKHGNDLKTVSTGHKTHIE---GEASHHVP 366 H DP+ S+ D D + +T ++G+ K +E GE HHVP Sbjct: 287 GHHHRDPSHRHRSHEEDDNDDDDVST-----EYGHQAHRHQDHRKEEVEAVSGEHHHHVP 341 Query: 367 SHSHKNKR 390 H H+ R Sbjct: 342 DHRHQGHR 349
>PAK7_HUMAN (Q9P286) Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1)| (p21-activated kinase 7) (PAK-7) (PAK-5) Length = 719 Score = 35.0 bits (79), Expect = 0.15 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Frame = +1 Query: 34 PNKATMTYGSEQEDDPHKVTMSYRANQEVDP--NKVTSSYGPGHEEYTNRITLSDVSEHE 207 P K T G ++ D VT S +E P ++ SS+GPGH E IT S S Sbjct: 76 PCKETSINGLLEDFDNISVTRSNSLRKESPPTPDQGASSHGPGHAEENGFITFSQYSSES 135 Query: 208 D-DPNKATMSYGSK----DEVDP 261 D + T Y K D++DP Sbjct: 136 DTTADYTTEKYREKSLYGDDLDP 158
>SYV_COREF (Q8FN65) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 903 Score = 33.9 bits (76), Expect = 0.33 Identities = 29/118 (24%), Positives = 50/118 (42%) Frame = +1 Query: 46 TMTYGSEQEDDPHKVTMSYRANQEVDPNKVTSSYGPGHEEYTNRITLSDVSEHEDDPNKA 225 ++ YGS +D+PH V + R E V + P E Y + + + DD Sbjct: 218 SIRYGSLNDDEPHVVVATTRV--ETMLGDVAVAVHPDDERYRHLVGTTLPHPFRDD---L 272 Query: 226 TMSYGSKDEVDPNKATMSYKLKHGNDLKTVSTGHKTHIEGEASHHVPSHSHKNKRHAD 399 T+ + D VDP + + K+ +D + G + H++ +P+ K R AD Sbjct: 273 TLKVVADDYVDPEFGSGAVKITPAHDPNDYALGLRHHLD------MPTIMDKTGRIAD 324
>DBP10_CANGA (Q6FNA2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 969 Score = 32.0 bits (71), Expect = 1.3 Identities = 25/109 (22%), Positives = 45/109 (41%) Frame = +1 Query: 61 SEQEDDPHKVTMSYRANQEVDPNKVTSSYGPGHEEYTNRITLSDVSEHEDDPNKATMSYG 240 +EQE+ K ++R DPN S Y P +E ++ LS +E + ++ Sbjct: 743 AEQENASKKKKKTFR-----DPNFFLSHYAPANEIQDKQLELSGGFINEAAQSAYDLNSD 797 Query: 241 SKDEVDPNKATMSYKLKHGNDLKTVSTGHKTHIEGEASHHVPSHSHKNK 387 K +V AT+ + K + +K +I GE+ + + K Sbjct: 798 DKVQVHKQTATVKWDKKRKKYVNMNGIDNKKYIIGESGQKIAASFRSGK 846
>EBA1_PLAFC (P19214) Erythrocyte-binding antigen EBA-175| Length = 1435 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 12/97 (12%) Frame = +1 Query: 100 YRANQEVDPNKVTSSY------------GPGHEEYTNRITLSDVSEHEDDPNKATMSYGS 243 Y+ N+ D +T Y E Y LS V++ +D +A M Sbjct: 1066 YKVNEREDERTLTKEYEDIVLKSHMNRESDDGELYDENSDLSTVNDESEDA-EAKMKGND 1124 Query: 244 KDEVDPNKATMSYKLKHGNDLKTVSTGHKTHIEGEAS 354 E+ N + + ND+KTV TH++ E S Sbjct: 1125 TSEMSHNSSQHIESDQQKNDMKTVGDLGTTHVQNEIS 1161
>SYV_CORJK (Q4JWU8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 932 Score = 31.2 bits (69), Expect = 2.1 Identities = 26/102 (25%), Positives = 45/102 (44%) Frame = +1 Query: 25 EDDPNKATMTYGSEQEDDPHKVTMSYRANQEVDPNKVTSSYGPGHEEYTNRITLSDVSEH 204 +D+ ++ YGS ++ +PH V + R E V + P E YT+ + S H Sbjct: 225 DDEGELVSIRYGSLEDSEPHVVVATTRV--ETMLGDVAVAVHPEDERYTDLVGKS--LPH 280 Query: 205 EDDPNKATMSYGSKDEVDPNKATMSYKLKHGNDLKTVSTGHK 330 P++ M + D VDP T + K+ +D + G + Sbjct: 281 PFLPDR-QMIVVADDYVDPEFGTGAVKITPAHDPNDFAMGQR 321
>MHP1_YEAST (P43638) MAP-homologous protein 1| Length = 1398 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Frame = +1 Query: 7 SYGANHEDDPNKATMTYGSEQEDDPHKVTMSYRANQEVDPNKVTSSYGPGHEEYTNRITL 186 SYG N+ + N ++++ + D ++ ++ E DP+K+T+ G + ++ Sbjct: 393 SYGNNNNNSTNASSLS-ANVNNPDTSSTSLWSSSSMEFDPSKITTVPGLENIRPLKHVSF 451 Query: 187 SDVSEHEDDPNKATMSYGSKDEVD--PNKATMSYKL 288 + + D P + K EV+ PN + + ++L Sbjct: 452 ATNTYFNDPPQQICSKNPRKGEVEVKPNGSVVIHRL 487
>CTL5_MOUSE (Q5RJI2) Choline transporter-like protein 5 (Solute carrier family| 44 member 5) Length = 710 Score = 30.8 bits (68), Expect = 2.8 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Frame = -3 Query: 404 KTSACLLFLWL*EGTW*LASPSMCVLCPVETVFRSFPCFSLYDIVALFGSTSSFDPYDIV 225 +T + + L EG+ ++ ++ PV T C S + + A+F +TS + ++ Sbjct: 341 RTRIQVAIILLQEGSKAISYLPSALIYPVLTFILLSICISYWAVTAVFLATSGVPIFKVM 400 Query: 224 ALLGSSSCSDTSDNVILFVYSS----CPGPYDDVTLFGSTS*FARY 99 G D + + +F Y++ CPG + +G S + Y Sbjct: 401 VPAGQCIYEDETCDPEIFPYTNIPKDCPGASCNFAFYGGRSMYHNY 446
>Y104_METJA (Q57568) Hypothetical ATP-dependent helicase MJ0104 (EC 3.6.1.-)| Length = 663 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +1 Query: 145 YGPGHEEYTNRITLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSYKLKHGNDLKTVSTG 324 +GP T IT V E + + +K + S D + Y +K DLK V G Sbjct: 206 HGPPGTGKTRTITEVIVQEVKFNKHKVLATADSNIAADN---ILEYLIKKYPDLKVVRVG 262 Query: 325 HKTHIEGE-ASHHVPSHSHKNKRHADVFFFRDMLR 426 H T I + H +P ++++ ++ R+ ++ Sbjct: 263 HPTRISKDLIQHSLPYLIENHEKYQEILALREKIK 297
>PER28_ARATH (Q9SS67) Peroxidase 28 precursor (EC 1.11.1.7) (Atperox P28)| (ATP39) Length = 321 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = -3 Query: 296 PCFSLYDIVALFGSTSSFDPYDIVALLGS-----SSCSDTSDNVILFVYSSCPGPYDDVT 132 P S+ +++ FG+ + +D VALLG+ +SC + D V F + P P D T Sbjct: 161 PFISVEGMLSFFGN-KGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPT 219 Query: 131 LFG 123 L G Sbjct: 220 LAG 222
>CAN7_HUMAN (Q9Y6W3) Calpain-7 (EC 3.4.22.-) (PalB homolog) (PalBH)| Length = 813 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 214 PNKATMSYGSKDEVDPNKATMSYKLKHGND-LKTVSTGHKTHIEGEASHHVPSHSH 378 P + M S+ N M Y+ H D L T STG T EGE VP+H++ Sbjct: 405 PERIAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGMMTEAEGEKWGLVPTHAY 460
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 30.0 bits (66), Expect = 4.8 Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 6/100 (6%) Frame = +1 Query: 16 ANHEDDPNKATMTYGSEQEDD-----PHKVTMSYRANQEVDPN-KVTSSYGPGHEEYTNR 177 + H + + T T + DD P K M + N + + + + P H+ Sbjct: 35 SRHHSESEERTETRENGVTDDLDAPKPKKAKMREKLNGDTKEGLRFSDEFSPSHKSRRKD 94 Query: 178 ITLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSYKLKHG 297 + DV E+E + + S S D + T++ + K G Sbjct: 95 LPNGDVDEYEKRSKRVSSSENSHKSSDKAEETLTREQKEG 134
>ZN613_HUMAN (Q6PF04) Zinc finger protein 613| Length = 617 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +2 Query: 164 SIQIELHYQMCRNTKMIPIKLQCHMGQKTKWIQTKQQCH 280 +++ E+H Q+C K + LQ H QK + ++ +QCH Sbjct: 67 TVENEIHSQICPEIKKVNNHLQMH-SQKQRCLKRVEQCH 104
>CAN7_MOUSE (Q9R1S8) Calpain-7 (EC 3.4.22.-) (PalB homolog) (PalBH)| Length = 813 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 214 PNKATMSYGSKDEVDPNKATMSYKLKHGND-LKTVSTGHKTHIEGEASHHVPSHSH 378 P + M S+ N M Y+ H D L T STG T EGE VP+H++ Sbjct: 405 PERIAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAY 460
>SGOL2_MOUSE (Q7TSY8) Shugoshin-like 2| Length = 1164 Score = 29.6 bits (65), Expect = 6.2 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +1 Query: 148 GPGHEEYTNRITLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSYKLKHGN 300 G GH E+T+ + + H D K+++ S+ + P+ + KL HGN Sbjct: 218 GSGHLEHTSSVDILPNESHSDQSPKSSL---SEMKTAPSPSLRREKLSHGN 265
>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) Length = 1105 Score = 29.6 bits (65), Expect = 6.2 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +1 Query: 181 TLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSYKLKHGNDLKTVSTGH 327 T++D+ E +++ T++ G K++ DP K S + G D T T H Sbjct: 404 TVADLDEQDEE----TVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQTNH 448
>LYS_BPB03 (Q37896) Lysozyme (EC 3.2.1.17) (Lysis protein) (Muramidase)| (Endolysin) (Morphogenesis protein 2) Length = 263 Score = 29.6 bits (65), Expect = 6.2 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +1 Query: 169 TNRITLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSYKLKHGNDLKTVSTGHKTHI 339 T+ TL +++ +PNK + P K+T+ YK+K G L ++ +KT + Sbjct: 182 TSTKTLLELNPTIKNPNKIYVGQRINVGGSPVKSTLKYKIKRGETLTGIAKKNKTTV 238
>COG8_CAEEL (O44502) Putative conserved oligomeric Golgi complex component 8| Length = 743 Score = 29.3 bits (64), Expect = 8.1 Identities = 22/88 (25%), Positives = 36/88 (40%) Frame = +1 Query: 58 GSEQEDDPHKVTMSYRANQEVDPNKVTSSYGPGHEEYTNRITLSDVSEHEDDPNKATMSY 237 G+E+ ++ K + R +E+ V P EE + L + E D P A Sbjct: 504 GAEKIEEIVKPLLQKRTLEEIGLENVLKPTKP--EEEKTKFFLEETVE--DGPGLAEPQE 559 Query: 238 GSKDEVDPNKATMSYKLKHGNDLKTVST 321 + + V + T + KHG D +T T Sbjct: 560 EASESVKEQETTSELEKKHGTDFETAET 587
>Y1632_HAEIN (Q57525) Hypothetical protein HI1632| Length = 121 Score = 29.3 bits (64), Expect = 8.1 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 149 PYDDVTLFGSTS*FARYDIVTLCGSSSCSDPYVIVALLGSSS 24 PY V FG TS A +D +T C +DP V +L +S+ Sbjct: 2 PYLSVAKFGGTS-VANHDAMTACAKIVIADPNTRVVVLSASA 42
>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)| Length = 3075 Score = 29.3 bits (64), Expect = 8.1 Identities = 13/56 (23%), Positives = 29/56 (51%) Frame = +1 Query: 178 ITLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSYKLKHGNDLKTVSTGHKTHIEG 345 +++ ++S ++ P K + S G+ + +D N +T+ + G +K TH +G Sbjct: 2215 LSVKEMSSNQKSPTKTSKSPGTANVLDVNNSTLMFVGGLGGQIKKSPAVKVTHFKG 2270
>DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 687 Score = 29.3 bits (64), Expect = 8.1 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = +1 Query: 136 TSSYGPGHEEYTNRITLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSYKLKHGN 300 +SS GH+ Y D S DDPN + S GS D N + HG+ Sbjct: 428 SSSNSDGHDSYD----FDDESMQGDDPNSSDESNGSDGSDDANSESAIENGNHGD 478
>APLP_MANSE (Q25490) Apolipophorins precursor [Contains: Apolipophorin-2| (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)] Length = 3305 Score = 29.3 bits (64), Expect = 8.1 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 14/113 (12%) Frame = +1 Query: 127 NKVTSSYGPGHEEYTNRITLSDVSEHEDDPNK--------------ATMSYGSKDEVDPN 264 N++ YGP + RIT S + ++ + +K + +VDP Sbjct: 1216 NELDIHYGPNRGDNNARITFSQILKYHVENSKNFNVITKNNLEIRAVPFKLVANADVDPK 1275 Query: 265 KATMSYKLKHGNDLKTVSTGHKTHIEGEASHHVPSHSHKNKRHADVFFFRDML 423 K + + + + + +THI+ E + + ++ N + + F RD++ Sbjct: 1276 KIDIDIEGQLQDKSAGFNLDARTHIKKEGDYSIKVKANLNNANLEAFSRRDIV 1328
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 29.3 bits (64), Expect = 8.1 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 37/162 (22%) Frame = +1 Query: 25 EDDPNKATMTYGSEQEDDPHKVTMSYRANQ-EVDPNKVTSSYGPGHEEYTNRITLSDVSE 201 EDD ++ T + H+ +R + E D ++ S+ H+ + +R + E Sbjct: 379 EDDDDEGDSTESDRHQAHRHR---GHREEEDEDDDDEGDSTESDHHQAHRHRGHREEEDE 435 Query: 202 HEDDPNKATMS----------YGSKDEVD----------PNKATMSYKLKHGNDLK---- 309 +DD +T S +G +++ D P++ ++ G D Sbjct: 436 EDDDEGDSTESDRHQAHRHRGHGEEEDEDDDDEGEHHHVPHRGHRGHEEDDGGDDDDGDD 495 Query: 310 TVSTGHKTH------------IEGEASHHVPSHSHKNKRHAD 399 + GH+ H E HHVP H H+ H D Sbjct: 496 STENGHQAHRHQGHGKEEAEVTSDEHHHHVPDHGHQG--HGD 535
>NLP1_CAEEL (Q11088) Neuropeptide-like protein 1 precursor| Length = 176 Score = 29.3 bits (64), Expect = 8.1 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 22/106 (20%) Frame = +1 Query: 31 DPNKATMTYG------SEQEDDPHKVTMS-------YRANQEVDPNKVTSSYGPGHE--- 162 DPN M++G +EQ + K T + + +D N S+G + Sbjct: 50 DPNAFRMSFGKRSAEQNEQANKEDKATSDKLYDDTKFEEMKRMDANAFRMSFGKRSDAHQ 109 Query: 163 ------EYTNRITLSDVSEHEDDPNKATMSYGSKDEVDPNKATMSY 282 EY N S + D N MS+G + +DPN MS+ Sbjct: 110 AADDQVEYVND-DFSLPEQKRMDANAFRMSFGKRVNLDPNSFRMSF 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.126 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,933,544 Number of Sequences: 219361 Number of extensions: 1688625 Number of successful extensions: 3593 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3403 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3573 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)