>NPBL_COPCI (Q00333) Protein rad9 (SCC2 homolog)|
          Length = 2157

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 262 SWSSMTR-SEPMTPPSIADDGCRSAPLSGSDRGATASDIPDMAAASVSLLSICSYGK 95
           S+  MT  S+P+TP        R APL+ + R + AS +P  A++S S+ S+ S  K
Sbjct: 372 SYKPMTLISQPLTPS-------RGAPLTPTSRASNASSVPTTASSSTSITSMSSSSK 421

>BRNQ_BACSU (P94499) Branched-chain amino acid transport system carrier protein|
           brnQ (Branched-chain amino acid uptake carrier brnQ)
          Length = 440

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = +3

Query: 237 SLRVIELQLVAFIMVFSMSGLVPLIDLAFPVVTTLYLIVLSRLAFPSLHSKLDDQXXXXX 416
           S + I + L  F  + +  GL  LI ++ PV+ T+Y I +S +    LHS    +     
Sbjct: 317 SYKKIAVVLSVFSTLVANIGLTQLIKVSMPVLLTMYPIAISLIFLTFLHSVFKGKT---- 372

Query: 417 XXXXQEIFRGSKLF 458
                E+++GS LF
Sbjct: 373 -----EVYQGSLLF 381

>TWIST_DROME (P10627) Protein twist|
          Length = 490

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -3

Query: 307 SGTRPDIEKTMMKATSWSSMTRSEPMTPPSIADDGCRSAPLSGSDRGATA 158
           S  R D+E     A S  S      M+P  +ADDG   + L GSD G  A
Sbjct: 290 SSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKA 339

>TWIST_DROER (Q8I1G0) Protein twist|
          Length = 490

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -3

Query: 307 SGTRPDIEKTMMKATSWSSMTRSEPMTPPSIADDGCRSAPLSGSDRGATA 158
           S  R D+E     A S  S      M+P  +ADDG   + L GSD G  A
Sbjct: 290 SSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKA 339

>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)|
          Length = 1669

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = -3

Query: 319 ARSMSGTRPDIEKTMMKATSWSSMTRSEPMTPPSIADDGCRSAPLSGSDRGATASDIPDM 140
           A S+SG+ P    T    TS SS + S   +  S       +AP + S  GA  + +   
Sbjct: 667 ASSISGSTPASSITSTSCTSSSSSSASMSSSCSSSNSGSTTTAPTTSSSAGAPTAPLTLA 726

Query: 139 AAASVSLLSI 110
           AAA  +L ++
Sbjct: 727 AAAETTLANV 736

>SYTL5_RAT (Q812E4) Synaptotagmin-like protein 5|
          Length = 753

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 187 LSGSDRGAT-ASDIPDMAAASVSLLSICSYGKCATDRRSP 71
           +SGSDRG+T +SD+ D  A   +    CS G     +RSP
Sbjct: 225 VSGSDRGSTTSSDLTDQEAGRGAPKGSCSNGGIPVTQRSP 264

>KN8R_YEAST (P53739) Probable serine/threonine-protein kinase YNR047W (EC|
           2.7.11.1)
          Length = 893

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 292 DIEK-TMMKATSWSSMTRSEPMTPPSIADDGCRSAPLSGSDRGATASD 152
           D++K    K   WS +   EP   P +++DG   A LS + +  T+ D
Sbjct: 770 DVKKHPFFKKVQWSLLRNQEPPLIPVLSEDGYDFAKLSSNKKRQTSQD 817

>IAA19_ARATH (O24409) Auxin-responsive protein IAA19 (Indoleacetic acid-induced|
           protein 19) (MASSUGU2 protein)
          Length = 197

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = -3

Query: 292 DIEKTMMKATSWSSMTRSEPMTPPSIADDGCRSAPLSGSDRGATASDIPDMAAASVSLLS 113
           D+ + MMK  +++ M     MT      D C S  +S        +D P   +  V    
Sbjct: 21  DVAEKMMKKRAFTEMN----MTSSGSNSDQCESGVVSSGGDAEKVNDSPAAKSQVVGWPP 76

Query: 112 ICSYGK 95
           +CSY K
Sbjct: 77  VCSYRK 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,206,013
Number of Sequences: 219361
Number of extensions: 750316
Number of successful extensions: 3005
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2983
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)