>ZN496_HUMAN (Q96IT1) Zinc finger protein 496|
          Length = 587

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 512 RGARAHSPHVSPFRVWSLRGGWLKLFWHTLDPVLHLLVDE 393
           R   A  P  +  R+W L GGWL+   HT + +L LLV E
Sbjct: 49  RYQEAAGPREALQRLWDLCGGWLRPERHTKEQILELLVLE 88

>PDR8_YEAST (Q06149) Transcription factor PDR8 (Pleiotropic drug resistance|
           protein 8)
          Length = 701

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 270 RFLDVVERYFARSDDSKRLQERPHLHYQVGVTPEGVEVPRSLVDKEMQDRIKS 428
           RF ++++  FA ++ +KRL +     YQ+  T     V R L DK  Q RI++
Sbjct: 596 RFYEIIDSIFAVNERNKRLLKAVSNFYQLTSTLAFERVSRVLFDKASQARIET 648

>NBEA_HUMAN (Q8NFP9) Protein neurobeachin (Lysosomal trafficking regulator 2)|
           (Protein BCL8B)
          Length = 2946

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 509 GARAHSPHVSPFRVWSLRGGWLKLFWHTLDPVLHLLVDEAARYLHAFR 366
           G  A +  + P   W  + G+    W  +DP+ ++ VD+   YL+ FR
Sbjct: 237 GCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFR 284

>NBEA_MOUSE (Q9EPN1) Protein neurobeachin (Lysosomal trafficking regulator 2)|
          Length = 2936

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 509 GARAHSPHVSPFRVWSLRGGWLKLFWHTLDPVLHLLVDEAARYLHAFR 366
           G  A +  + P   W  + G+    W  +DP+ ++ VD+   YL+ FR
Sbjct: 227 GCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFR 274

>LRBA_HUMAN (P50851) Lipopolysaccharide-responsive and beige-like anchor|
           protein (CDC4-like protein) (Beige-like protein)
          Length = 2863

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 509 GARAHSPHVSPFRVWSLRGGWLKLFWHTLDPVLHLLVDEAARYLHAFR 366
           G  A +  + P   W  + G+    W  +DPV ++ VD+   YL+ FR
Sbjct: 211 GKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNINVDKDKPYLYCFR 258

>NCKX_DROME (Q9U6A0) Sodium/potassium/calcium exchanger|
           (Na(+)/K(+)/Ca(2+)-exchange protein)
          Length = 856

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -1

Query: 458 RGGWLKLFWHTLDPVLHLLVDEAARYLHA 372
           R G L+L  HT+DP+    VDE A  LHA
Sbjct: 569 RHGLLQLMIHTIDPLHDGKVDEKATQLHA 597


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,976,572
Number of Sequences: 219361
Number of extensions: 1082762
Number of successful extensions: 3626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3613
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)