ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart34g01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 188 bits (95), Expect = 1e-44 Identities = 256/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 118 cgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgg 177 |||||||||| | |||||| |||||||||| ||| | || ||||||||||||| | ||| Sbjct: 23051280 cgccgctgcgggttgtgatcttcccgtggctggcgttcgggcacctgctcccgtacatgg 23051221 Query: 178 agctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtt 237 ||||||| ||||| | || || ||||||||| |||||||| ||||||||||||| | Sbjct: 23051220 agctcgcggagcgcatggcgtcgaggggccaccacgtgtccttcgtctccacgccgcgga 23051161 Query: 238 acctcgcgcgcctcccgccgccgg---cgccgcgcgtggagctcgtcgcgctcccgctgc 294 || |||||||||||||| |||||| || || ||||||||||| ||||| ||||| | Sbjct: 23051160 acatcgcgcgcctcccggcgccggtggcgtcggcggtggagctcgtggcgctgccgctcc 23051101 Query: 295 cgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtcccggcacaccagc 354 |||| |||||||||||| ||||||||||||||||||||||||||||||| | || ||| Sbjct: 23051100 cgcgggtggacggcctcgccgacggcgccgagtccaccaacgacgtccccgacgacgagc 23051041 Query: 355 gggagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 || ||||| | | |||||||||||||||||||||| || ||||| | |||||||||| Sbjct: 23051040 aggggctcctcatggaggccttcgacggcctcgccgctcctttcgccgacttcctggccg 23050981 Query: 415 ccgcctgcg 423 |||| |||| Sbjct: 23050980 ccgcgtgcg 23050972
>dbj|AK121202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087K24, full insert sequence Length = 1834 Score = 188 bits (95), Expect = 1e-44 Identities = 256/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 118 cgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgg 177 |||||||||| | |||||| |||||||||| ||| | || ||||||||||||| | ||| Sbjct: 21 cgccgctgcgggttgtgatcttcccgtggctggcgttcgggcacctgctcccgtacatgg 80 Query: 178 agctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtt 237 ||||||| ||||| | || || ||||||||| |||||||| ||||||||||||| | Sbjct: 81 agctcgcggagcgcatggcgtcgaggggccaccacgtgtccttcgtctccacgccgcgga 140 Query: 238 acctcgcgcgcctcccgccgccgg---cgccgcgcgtggagctcgtcgcgctcccgctgc 294 || |||||||||||||| |||||| || || ||||||||||| ||||| ||||| | Sbjct: 141 acatcgcgcgcctcccggcgccggtggcgtcggcggtggagctcgtggcgctgccgctcc 200 Query: 295 cgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtcccggcacaccagc 354 |||| |||||||||||| ||||||||||||||||||||||||||||||| | || ||| Sbjct: 201 cgcgggtggacggcctcgccgacggcgccgagtccaccaacgacgtccccgacgacgagc 260 Query: 355 gggagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 || ||||| | | |||||||||||||||||||||| || ||||| | |||||||||| Sbjct: 261 aggggctcctcatggaggccttcgacggcctcgccgctcctttcgccgacttcctggccg 320 Query: 415 ccgcctgcg 423 |||| |||| Sbjct: 321 ccgcgtgcg 329
>dbj|AK060965.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B11, full insert sequence Length = 1729 Score = 188 bits (95), Expect = 1e-44 Identities = 256/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 118 cgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgg 177 |||||||||| | |||||| |||||||||| ||| | || ||||||||||||| | ||| Sbjct: 20 cgccgctgcgggttgtgatcttcccgtggctggcgttcgggcacctgctcccgtacatgg 79 Query: 178 agctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtt 237 ||||||| ||||| | || || ||||||||| |||||||| ||||||||||||| | Sbjct: 80 agctcgcggagcgcatggcgtcgaggggccaccacgtgtccttcgtctccacgccgcgga 139 Query: 238 acctcgcgcgcctcccgccgccgg---cgccgcgcgtggagctcgtcgcgctcccgctgc 294 || |||||||||||||| |||||| || || ||||||||||| ||||| ||||| | Sbjct: 140 acatcgcgcgcctcccggcgccggtggcgtcggcggtggagctcgtggcgctgccgctcc 199 Query: 295 cgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtcccggcacaccagc 354 |||| |||||||||||| ||||||||||||||||||||||||||||||| | || ||| Sbjct: 200 cgcgggtggacggcctcgccgacggcgccgagtccaccaacgacgtccccgacgacgagc 259 Query: 355 gggagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 || ||||| | | |||||||||||||||||||||| || ||||| | |||||||||| Sbjct: 260 aggggctcctcatggaggccttcgacggcctcgccgctcctttcgccgacttcctggccg 319 Query: 415 ccgcctgcg 423 |||| |||| Sbjct: 320 ccgcgtgcg 328
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 188 bits (95), Expect = 1e-44 Identities = 256/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 118 cgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgg 177 |||||||||| | |||||| |||||||||| ||| | || ||||||||||||| | ||| Sbjct: 22979471 cgccgctgcgggttgtgatcttcccgtggctggcgttcgggcacctgctcccgtacatgg 22979412 Query: 178 agctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtt 237 ||||||| ||||| | || || ||||||||| |||||||| ||||||||||||| | Sbjct: 22979411 agctcgcggagcgcatggcgtcgaggggccaccacgtgtccttcgtctccacgccgcgga 22979352 Query: 238 acctcgcgcgcctcccgccgccgg---cgccgcgcgtggagctcgtcgcgctcccgctgc 294 || |||||||||||||| |||||| || || ||||||||||| ||||| ||||| | Sbjct: 22979351 acatcgcgcgcctcccggcgccggtggcgtcggcggtggagctcgtggcgctgccgctcc 22979292 Query: 295 cgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtcccggcacaccagc 354 |||| |||||||||||| ||||||||||||||||||||||||||||||| | || ||| Sbjct: 22979291 cgcgggtggacggcctcgccgacggcgccgagtccaccaacgacgtccccgacgacgagc 22979232 Query: 355 gggagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 || ||||| | | |||||||||||||||||||||| || ||||| | |||||||||| Sbjct: 22979231 aggggctcctcatggaggccttcgacggcctcgccgctcctttcgccgacttcctggccg 22979172 Query: 415 ccgcctgcg 423 |||| |||| Sbjct: 22979171 ccgcgtgcg 22979163
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 188 bits (95), Expect = 1e-44 Identities = 256/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 118 cgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgg 177 |||||||||| | |||||| |||||||||| ||| | || ||||||||||||| | ||| Sbjct: 127117 cgccgctgcgggttgtgatcttcccgtggctggcgttcgggcacctgctcccgtacatgg 127176 Query: 178 agctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtt 237 ||||||| ||||| | || || ||||||||| |||||||| ||||||||||||| | Sbjct: 127177 agctcgcggagcgcatggcgtcgaggggccaccacgtgtccttcgtctccacgccgcgga 127236 Query: 238 acctcgcgcgcctcccgccgccgg---cgccgcgcgtggagctcgtcgcgctcccgctgc 294 || |||||||||||||| |||||| || || ||||||||||| ||||| ||||| | Sbjct: 127237 acatcgcgcgcctcccggcgccggtggcgtcggcggtggagctcgtggcgctgccgctcc 127296 Query: 295 cgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtcccggcacaccagc 354 |||| |||||||||||| ||||||||||||||||||||||||||||||| | || ||| Sbjct: 127297 cgcgggtggacggcctcgccgacggcgccgagtccaccaacgacgtccccgacgacgagc 127356 Query: 355 gggagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 || ||||| | | |||||||||||||||||||||| || ||||| | |||||||||| Sbjct: 127357 aggggctcctcatggaggccttcgacggcctcgccgctcctttcgccgacttcctggccg 127416 Query: 415 ccgcctgcg 423 |||| |||| Sbjct: 127417 ccgcgtgcg 127425
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 137 bits (69), Expect = 4e-29 Identities = 151/177 (85%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 247 gcctcccgccgccggcgccgcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacg 306 ||||||||| || |||||||| ||| |||||||||||||| ||||| |||||| | |||| Sbjct: 84985 gcctcccgc-gctggcgccgctcgtcgagctcgtcgcgctgccgctcccgcgcatcgacg 85043 Query: 307 gcctccccgacggcgccgagtccaccaacgacgtcccggcacaccagcgggagctccact 366 ||||||| ||||||||||||||||||| |||||| || || || ||||||||| Sbjct: 85044 gcctcccggacggcgccgagtccaccagcgacgtgccatacgacaagttcgagctccaca 85103 Query: 367 ggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccgccgcctgcg 423 |||||||||||||||||||||||||||| ||||||| |||||| | |||||| |||| Sbjct: 85104 ggaaggccttcgacggcctcgccgcgccgttcgcggcgttcctcgacgccgcgtgcg 85160 Score = 69.9 bits (35), Expect = 7e-09 Identities = 104/127 (81%) Strand = Plus / Plus Query: 128 catcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccga 187 |||||| ||| ||||||||||||| | ||||||||||| || ||||| |||||||| || Sbjct: 84853 catcgtcatcttcccgtggctcgctttcggccacctgcttccctgcctcgagctcgctga 84912 Query: 188 gcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgttacctcgcgcg 247 ||| || ||| | || || ||||||||||| | ||| ||||||||| | |||||| ||| Sbjct: 84913 gcgtctggccgcgcgcggtcaccgcgtgtcgttcgtttccacgccgcgcaacctcgagcg 84972 Query: 248 cctcccg 254 |||||| Sbjct: 84973 actcccg 84979
>ref|XM_469430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 121 bits (61), Expect = 2e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 117 tcgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctg 176 |||||||||| | |||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 81 tcgccgctgcacgtcgtcatcttcccgtggctcgccttcggccacctgctcccctgcctt 140 Query: 177 gagctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgt 236 || ||||||||||| |||||| | || |||||||||||||||| ||||||||| ||| | Sbjct: 141 gacctcgccgagcgcctcgccgcgcgcggccaccgcgtgtccttcgtctccaccccgcgc 200 Query: 237 tacctcgcgcgcctcccgccg 257 ||||||| |||||||||||| Sbjct: 201 aacctcgcccgcctcccgccg 221 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 276 ctcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaac 335 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||| |||||| | Sbjct: 252 ctcgtggcgctcccactgccgcgcgtcgacgggctccccgacggcgccgaggccaccagc 311 Query: 336 gacgtcccggcacaccagcgggagctccactggaaggccttcgacggcctcgccgcgcc 394 ||||||||| || || ||||| ||| ||||||| |||||||| ||||||||||| Sbjct: 312 gacgtcccgttcgacaagttcgagcttcacaggaaggcgttcgacgggctcgccgcgcc 370
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 121 bits (61), Expect = 2e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 117 tcgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctg 176 |||||||||| | |||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 60585 tcgccgctgcacgtcgtcatcttcccgtggctcgccttcggccacctgctcccctgcctt 60644 Query: 177 gagctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgt 236 || ||||||||||| |||||| | || |||||||||||||||| ||||||||| ||| | Sbjct: 60645 gacctcgccgagcgcctcgccgcgcgcggccaccgcgtgtccttcgtctccaccccgcgc 60704 Query: 237 tacctcgcgcgcctcccgccg 257 ||||||| |||||||||||| Sbjct: 60705 aacctcgcccgcctcccgccg 60725 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 36267 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 36208 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 36207 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 36164 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 276 ctcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaac 335 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||| |||||| | Sbjct: 60756 ctcgtggcgctcccactgccgcgcgtcgacgggctccccgacggcgccgaggccaccagc 60815 Query: 336 gacgtcccggcacaccagcgggagctccactggaaggccttcgacggcctcgccgcgcc 394 ||||||||| || || ||||| ||| ||||||| |||||||| ||||||||||| Sbjct: 60816 gacgtcccgttcgacaagttcgagcttcacaggaaggcgttcgacgggctcgccgcgcc 60874 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 36108 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 36049 Query: 337 acgtccc 343 ||||||| Sbjct: 36048 acgtccc 36042 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 36019 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 35969 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Minus Query: 288 ccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtccc 343 ||||| |||||||| || || |||||| ||||||||||||| ||| || ||||||| Sbjct: 37142 ccgctcccgcgcgtcgaggggctccccaacggcgccgagtctacccacaacgtccc 37087
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 2e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 117 tcgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctg 176 |||||||||| | |||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 27924857 tcgccgctgcacgtcgtcatcttcccgtggctcgccttcggccacctgctcccctgcctt 27924916 Query: 177 gagctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgt 236 || ||||||||||| |||||| | || |||||||||||||||| ||||||||| ||| | Sbjct: 27924917 gacctcgccgagcgcctcgccgcgcgcggccaccgcgtgtccttcgtctccaccccgcgc 27924976 Query: 237 tacctcgcgcgcctcccgccg 257 ||||||| |||||||||||| Sbjct: 27924977 aacctcgcccgcctcccgccg 27924997 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 276 ctcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaac 335 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||| |||||| | Sbjct: 27925028 ctcgtggcgctcccactgccgcgcgtcgacgggctccccgacggcgccgaggccaccagc 27925087 Query: 336 gacgtcccggcacaccagcgggagctccactggaaggccttcgacggcctcgccgcgcc 394 ||||||||| || || ||||| ||| ||||||| |||||||| ||||||||||| Sbjct: 27925088 gacgtcccgttcgacaagttcgagcttcacaggaaggcgttcgacgggctcgccgcgcc 27925146 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cctcccgccgccggcgccgcgc 269 |||||||||||||||||||||| Sbjct: 10335473 cctcccgccgccggcgccgcgc 10335452 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gcctcccgccgccggcgccg 266 |||||||||||||||||||| Sbjct: 30978458 gcctcccgccgccggcgccg 30978439 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcctcctcctcgccgctgcg 127 |||||||||||||||||||| Sbjct: 7720678 tcctcctcctcgccgctgcg 7720697 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctcccgccgccggcgcc 265 |||||||||||||||||||| Sbjct: 5230238 cgcctcccgccgccggcgcc 5230257
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 121 bits (61), Expect = 2e-24 Identities = 121/141 (85%) Strand = Plus / Minus Query: 117 tcgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctg 176 |||||||||| | |||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 100169 tcgccgctgcacgtcgtcatcttcccgtggctcgccttcggccacctgctcccctgcctt 100110 Query: 177 gagctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgt 236 || ||||||||||| |||||| | || |||||||||||||||| ||||||||| ||| | Sbjct: 100109 gacctcgccgagcgcctcgccgcgcgcggccaccgcgtgtccttcgtctccaccccgcgc 100050 Query: 237 tacctcgcgcgcctcccgccg 257 ||||||| |||||||||||| Sbjct: 100049 aacctcgcccgcctcccgccg 100029 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 124487 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 124546 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 124547 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 124590 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 276 ctcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaac 335 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||| |||||| | Sbjct: 99998 ctcgtggcgctcccactgccgcgcgtcgacgggctccccgacggcgccgaggccaccagc 99939 Query: 336 gacgtcccggcacaccagcgggagctccactggaaggccttcgacggcctcgccgcgcc 394 ||||||||| || || ||||| ||| ||||||| |||||||| ||||||||||| Sbjct: 99938 gacgtcccgttcgacaagttcgagcttcacaggaaggcgttcgacgggctcgccgcgcc 99880 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 124646 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 124705 Query: 337 acgtccc 343 ||||||| Sbjct: 124706 acgtccc 124712 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 124735 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 124785 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 288 ccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtccc 343 ||||| |||||||| || || |||||| ||||||||||||| ||| || ||||||| Sbjct: 123612 ccgctcccgcgcgtcgaggggctccccaacggcgccgagtctacccacaacgtccc 123667
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 2e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 117 tcgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctg 176 |||||||||| | |||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 28016181 tcgccgctgcacgtcgtcatcttcccgtggctcgccttcggccacctgctcccctgcctt 28016240 Query: 177 gagctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgt 236 || ||||||||||| |||||| | || |||||||||||||||| ||||||||| ||| | Sbjct: 28016241 gacctcgccgagcgcctcgccgcgcgcggccaccgcgtgtccttcgtctccaccccgcgc 28016300 Query: 237 tacctcgcgcgcctcccgccg 257 ||||||| |||||||||||| Sbjct: 28016301 aacctcgcccgcctcccgccg 28016321 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 27995429 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 27995370 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 27995369 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 27995326 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 276 ctcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaac 335 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||| |||||| | Sbjct: 28016352 ctcgtggcgctcccactgccgcgcgtcgacgggctccccgacggcgccgaggccaccagc 28016411 Query: 336 gacgtcccggcacaccagcgggagctccactggaaggccttcgacggcctcgccgcgcc 394 ||||||||| || || ||||| ||| ||||||| |||||||| ||||||||||| Sbjct: 28016412 gacgtcccgttcgacaagttcgagcttcacaggaaggcgttcgacgggctcgccgcgcc 28016470 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 27995270 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 27995211 Query: 337 acgtccc 343 ||||||| Sbjct: 27995210 acgtccc 27995204 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 27995181 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 27995131 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Minus Query: 288 ccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtccc 343 ||||| |||||||| || || |||||| ||||||||||||| ||| || ||||||| Sbjct: 27996304 ccgctcccgcgcgtcgaggggctccccaacggcgccgagtctacccacaacgtccc 27996249 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cctcccgccgccggcgccgcgc 269 |||||||||||||||||||||| Sbjct: 10333574 cctcccgccgccggcgccgcgc 10333553 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gcctcccgccgccggcgccg 266 |||||||||||||||||||| Sbjct: 31068981 gcctcccgccgccggcgccg 31068962 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcctcctcctcgccgctgcg 127 |||||||||||||||||||| Sbjct: 7718513 tcctcctcctcgccgctgcg 7718532 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctcccgccgccggcgcc 265 |||||||||||||||||||| Sbjct: 5229453 cgcctcccgccgccggcgcc 5229472
>dbj|AK108055.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H10, full insert sequence Length = 1706 Score = 121 bits (61), Expect = 2e-24 Identities = 121/141 (85%) Strand = Plus / Minus Query: 117 tcgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctg 176 |||||||||| | |||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 1354 tcgccgctgcacgtcgtcatcttcccgtggctcgccttcggccacctgctcccctgcctt 1295 Query: 177 gagctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgt 236 || ||||||||||| |||||| | || |||||||||||||||| ||||||||| ||| | Sbjct: 1294 gacctcgccgagcgcctcgccgcgcgcggccaccgcgtgtccttcgtctccaccccgcgc 1235 Query: 237 tacctcgcgcgcctcccgccg 257 ||||||| |||||||||||| Sbjct: 1234 aacctcgcccgcctcccgccg 1214 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 276 ctcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaac 335 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||| |||||| | Sbjct: 1183 ctcgtggcgctcccactgccgcgcgtcgacgggctccccgacggcgccgaggccaccagc 1124 Query: 336 gacgtcccggcacaccagcgggagctccactggaaggccttcgacggcctcgccgcgcc 394 ||||||||| || || ||||| ||| ||||||| |||||||| ||||||||||| Sbjct: 1123 gacgtcccgttcgacaagttcgagcttcacaggaaggcgttcgacgggctcgccgcgcc 1065
>dbj|AK064270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E07, full insert sequence Length = 1586 Score = 121 bits (61), Expect = 2e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 117 tcgccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctg 176 |||||||||| | |||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 83 tcgccgctgcacgtcgtcatcttcccgtggctcgccttcggccacctgctcccctgcctt 142 Query: 177 gagctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgt 236 || ||||||||||| |||||| | || |||||||||||||||| ||||||||| ||| | Sbjct: 143 gacctcgccgagcgcctcgccgcgcgcggccaccgcgtgtccttcgtctccaccccgcgc 202 Query: 237 tacctcgcgcgcctcccgccg 257 ||||||| |||||||||||| Sbjct: 203 aacctcgcccgcctcccgccg 223 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 276 ctcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaac 335 ||||| |||||||| ||||||||||| ||||| |||||||||||||||||| |||||| | Sbjct: 254 ctcgtggcgctcccactgccgcgcgtcgacgggctccccgacggcgccgaggccaccagc 313 Query: 336 gacgtcccggcacaccagcgggagctccactggaaggccttcgacggcctcgccgcgcc 394 ||||||||| || || ||||| ||| ||||||| |||||||| ||||||||||| Sbjct: 314 gacgtcccgttcgacaagttcgagcttcacaggaaggcgttcgacgggctcgccgcgcc 372
>ref|XM_466458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1296 Score = 115 bits (58), Expect = 1e-22 Identities = 171/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 139 tcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcggctcgcct 198 |||||||||||||| | |||||||| ||||| ||| |||||||||| || || |||| Sbjct: 32 tcccgtggctcgcgttcggccacctcctccctgccctcgagctcgccggccgcctggcct 91 Query: 199 cccggggccaccgcgtgtcctacgtctccacgccgtgttacctcgcgcgcctcccgccgc 258 | || |||| ||||||||||| ||||||||| ||| | || |||| ||||||| ||||| Sbjct: 92 cgcgcggcctccgcgtgtccttcgtctccaccccgcgcaacatcgctcgcctcc-gccgc 150 Query: 259 cggcgcc-gcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcctccccgac 317 | | ||| | ||| ||| |||||| ||| ||||| |||||||| ||||||||||||||| Sbjct: 151 ccgtgcccgtccgtcgagttcgtcgagctgccgctcccgcgcgtcgacggcctccccgac 210 Query: 318 ggcgccgagtccaccaacgacgtccc 343 ||||||||| |||||| ||||||||| Sbjct: 211 ggcgccgaggccaccaccgacgtccc 236
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 115 bits (58), Expect = 1e-22 Identities = 171/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Minus Query: 139 tcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcggctcgcct 198 |||||||||||||| | |||||||| ||||| ||| |||||||||| || || |||| Sbjct: 22762612 tcccgtggctcgcgttcggccacctcctccctgccctcgagctcgccggccgcctggcct 22762553 Query: 199 cccggggccaccgcgtgtcctacgtctccacgccgtgttacctcgcgcgcctcccgccgc 258 | || |||| ||||||||||| ||||||||| ||| | || |||| ||||||| ||||| Sbjct: 22762552 cgcgcggcctccgcgtgtccttcgtctccaccccgcgcaacatcgctcgcctcc-gccgc 22762494 Query: 259 cggcgcc-gcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcctccccgac 317 | | ||| | ||| ||| |||||| ||| ||||| |||||||| ||||||||||||||| Sbjct: 22762493 ccgtgcccgtccgtcgagttcgtcgagctgccgctcccgcgcgtcgacggcctccccgac 22762434 Query: 318 ggcgccgagtccaccaacgacgtccc 343 ||||||||| |||||| ||||||||| Sbjct: 22762433 ggcgccgaggccaccaccgacgtccc 22762408 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 |||||||| ||||||||||||||| || ||||||| |||||| |||| Sbjct: 34294333 gaaggcctgcgacggcctcgccgccccgttcgcggcgttcctcgccg 34294379 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gcgcgcctcccgccgccggcgccg 266 |||||||||||||||||| ||||| Sbjct: 14434739 gcgcgcctcccgccgccgccgccg 14434762
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 115 bits (58), Expect = 1e-22 Identities = 171/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Minus Query: 139 tcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcggctcgcct 198 |||||||||||||| | |||||||| ||||| ||| |||||||||| || || |||| Sbjct: 121408 tcccgtggctcgcgttcggccacctcctccctgccctcgagctcgccggccgcctggcct 121349 Query: 199 cccggggccaccgcgtgtcctacgtctccacgccgtgttacctcgcgcgcctcccgccgc 258 | || |||| ||||||||||| ||||||||| ||| | || |||| ||||||| ||||| Sbjct: 121348 cgcgcggcctccgcgtgtccttcgtctccaccccgcgcaacatcgctcgcctcc-gccgc 121290 Query: 259 cggcgcc-gcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcctccccgac 317 | | ||| | ||| ||| |||||| ||| ||||| |||||||| ||||||||||||||| Sbjct: 121289 ccgtgcccgtccgtcgagttcgtcgagctgccgctcccgcgcgtcgacggcctccccgac 121230 Query: 318 ggcgccgagtccaccaacgacgtccc 343 ||||||||| |||||| ||||||||| Sbjct: 121229 ggcgccgaggccaccaccgacgtccc 121204
>ref|NM_194659.1| Oryza sativa (japonica cultivar-group) putative anthocyanidin-3-glucoside rhamnosyltransferase (OSJNBa0049K09.17), mRNA Length = 1479 Score = 113 bits (57), Expect = 5e-22 Identities = 133/157 (84%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 251 cccgccgccggcgccgcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcct 310 |||||||||| || ||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 178 cccgccgccg-cggcgcgcgtcgacctcgtggcgctgccgctcccgcgcgtcgacggcct 236 Query: 311 ccccgacggcgccgagtccaccaacgacgtcccggcacaccagcgggagctccactggaa 370 ||||||||||||||||| ||||||||| ||||| | | || || |||| |||||| Sbjct: 237 ccccgacggcgccgagtgcaccaacgatgtcccctccggcaagttcgacctcctctggaa 296 Query: 371 ggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||||| |||||||||||| ||||||| |||| Sbjct: 297 ggccttcgacgccctcgccgcgccgttcgcggagttc 333 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 119 gccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgga 178 |||||||| | | |||||| |||| ||||||||| | |||||||||||||| | ||| || Sbjct: 33 gccgctgcaccttgtgatcttcccatggctcgcgttcggccacctgctcccttacctcga 92 Query: 179 gctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtta 238 |||||| ||||| | || || || |||||||||||||||| ||||||||||||| | | Sbjct: 93 gctcgcggagcgcgtggcgtcgcgcggccaccgcgtgtccttcgtctccacgccgcgcaa 152 Query: 239 cctcgcgcgcctcccgccg 257 | ||||||||||||||||| Sbjct: 153 catcgcgcgcctcccgccg 171 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 tcgccgacaccttccaccactggg 477 |||||||||| ||||||||||||| Sbjct: 389 tcgccgacacgttccaccactggg 412
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 113 bits (57), Expect = 5e-22 Identities = 133/157 (84%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 251 cccgccgccggcgccgcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcct 310 |||||||||| || ||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 1384914 cccgccgccg-cggcgcgcgtcgacctcgtggcgctgccgctcccgcgcgtcgacggcct 1384972 Query: 311 ccccgacggcgccgagtccaccaacgacgtcccggcacaccagcgggagctccactggaa 370 ||||||||||||||||| ||||||||| ||||| | | || || |||| |||||| Sbjct: 1384973 ccccgacggcgccgagtgcaccaacgatgtcccctccggcaagttcgacctcctctggaa 1385032 Query: 371 ggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||||| |||||||||||| ||||||| |||| Sbjct: 1385033 ggccttcgacgccctcgccgcgccgttcgcggagttc 1385069 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 119 gccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgga 178 |||||||| | | |||||| |||| ||||||||| | |||||||||||||| | ||| || Sbjct: 1384769 gccgctgcaccttgtgatcttcccatggctcgcgttcggccacctgctcccttacctcga 1384828 Query: 179 gctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtta 238 |||||| ||||| | || || || |||||||||||||||| ||||||||||||| | | Sbjct: 1384829 gctcgcggagcgcgtggcgtcgcgcggccaccgcgtgtccttcgtctccacgccgcgcaa 1384888 Query: 239 cctcgcgcgcctcccgccg 257 | ||||||||||||||||| Sbjct: 1384889 catcgcgcgcctcccgccg 1384907 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 tcgccgacaccttccaccactggg 477 |||||||||| ||||||||||||| Sbjct: 1385125 tcgccgacacgttccaccactggg 1385148
>gb|AC074282.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0049K09, complete sequence Length = 146576 Score = 113 bits (57), Expect = 5e-22 Identities = 133/157 (84%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 251 cccgccgccggcgccgcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcct 310 |||||||||| || ||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 84244 cccgccgccg-cggcgcgcgtcgacctcgtggcgctgccgctcccgcgcgtcgacggcct 84302 Query: 311 ccccgacggcgccgagtccaccaacgacgtcccggcacaccagcgggagctccactggaa 370 ||||||||||||||||| ||||||||| ||||| | | || || |||| |||||| Sbjct: 84303 ccccgacggcgccgagtgcaccaacgatgtcccctccggcaagttcgacctcctctggaa 84362 Query: 371 ggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||||| |||||||||||| ||||||| |||| Sbjct: 84363 ggccttcgacgccctcgccgcgccgttcgcggagttc 84399 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 119 gccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgga 178 |||||||| | | |||||| |||| ||||||||| | |||||||||||||| | ||| || Sbjct: 84099 gccgctgcaccttgtgatcttcccatggctcgcgttcggccacctgctcccttacctcga 84158 Query: 179 gctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtta 238 |||||| ||||| | || || || |||||||||||||||| ||||||||||||| | | Sbjct: 84159 gctcgcggagcgcgtggcgtcgcgcggccaccgcgtgtccttcgtctccacgccgcgcaa 84218 Query: 239 cctcgcgcgcctcccgccg 257 | ||||||||||||||||| Sbjct: 84219 catcgcgcgcctcccgccg 84237 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 tcgccgacaccttccaccactggg 477 |||||||||| ||||||||||||| Sbjct: 84455 tcgccgacacgttccaccactggg 84478
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 113 bits (57), Expect = 5e-22 Identities = 133/157 (84%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 251 cccgccgccggcgccgcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcct 310 |||||||||| || ||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 1384914 cccgccgccg-cggcgcgcgtcgacctcgtggcgctgccgctcccgcgcgtcgacggcct 1384972 Query: 311 ccccgacggcgccgagtccaccaacgacgtcccggcacaccagcgggagctccactggaa 370 ||||||||||||||||| ||||||||| ||||| | | || || |||| |||||| Sbjct: 1384973 ccccgacggcgccgagtgcaccaacgatgtcccctccggcaagttcgacctcctctggaa 1385032 Query: 371 ggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||||| |||||||||||| ||||||| |||| Sbjct: 1385033 ggccttcgacgccctcgccgcgccgttcgcggagttc 1385069 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 119 gccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgga 178 |||||||| | | |||||| |||| ||||||||| | |||||||||||||| | ||| || Sbjct: 1384769 gccgctgcaccttgtgatcttcccatggctcgcgttcggccacctgctcccttacctcga 1384828 Query: 179 gctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtta 238 |||||| ||||| | || || || |||||||||||||||| ||||||||||||| | | Sbjct: 1384829 gctcgcggagcgcgtggcgtcgcgcggccaccgcgtgtccttcgtctccacgccgcgcaa 1384888 Query: 239 cctcgcgcgcctcccgccg 257 | ||||||||||||||||| Sbjct: 1384889 catcgcgcgcctcccgccg 1384907 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgcctcccgccgccggcgccgcgc 269 |||| ||||||||||||||||||| Sbjct: 3018240 cgccgcccgccgccggcgccgcgc 3018263 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 tcgccgacaccttccaccactggg 477 |||||||||| ||||||||||||| Sbjct: 1385125 tcgccgacacgttccaccactggg 1385148
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 113 bits (57), Expect = 5e-22 Identities = 133/157 (84%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 251 cccgccgccggcgccgcgcgtggagctcgtcgcgctcccgctgccgcgcgtggacggcct 310 |||||||||| || ||||||| || ||||| ||||| ||||| |||||||| |||||||| Sbjct: 1384911 cccgccgccg-cggcgcgcgtcgacctcgtggcgctgccgctcccgcgcgtcgacggcct 1384969 Query: 311 ccccgacggcgccgagtccaccaacgacgtcccggcacaccagcgggagctccactggaa 370 ||||||||||||||||| ||||||||| ||||| | | || || |||| |||||| Sbjct: 1384970 ccccgacggcgccgagtgcaccaacgatgtcccctccggcaagttcgacctcctctggaa 1385029 Query: 371 ggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||||| |||||||||||| ||||||| |||| Sbjct: 1385030 ggccttcgacgccctcgccgcgccgttcgcggagttc 1385066 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 119 gccgctgcgcatcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctgga 178 |||||||| | | |||||| |||| ||||||||| | |||||||||||||| | ||| || Sbjct: 1384766 gccgctgcaccttgtgatcttcccatggctcgcgttcggccacctgctcccttacctcga 1384825 Query: 179 gctcgccgagcggctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgtta 238 |||||| ||||| | || || || |||||||||||||||| ||||||||||||| | | Sbjct: 1384826 gctcgcggagcgcgtggcgtcgcgcggccaccgcgtgtccttcgtctccacgccgcgcaa 1384885 Query: 239 cctcgcgcgcctcccgccg 257 | ||||||||||||||||| Sbjct: 1384886 catcgcgcgcctcccgccg 1384904 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgcctcccgccgccggcgccgcgc 269 |||| ||||||||||||||||||| Sbjct: 3018161 cgccgcccgccgccggcgccgcgc 3018184 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 tcgccgacaccttccaccactggg 477 |||||||||| ||||||||||||| Sbjct: 1385122 tcgccgacacgttccaccactggg 1385145
>ref|XM_469427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2319 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 980 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 1039 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 1040 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 1083 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 1139 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 1198 Query: 337 acgtccc 343 ||||||| Sbjct: 1199 acgtccc 1205 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 1228 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 1278 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 288 ccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacgacgtccc 343 ||||| |||||||| || || |||||| ||||||||||||| ||| || ||||||| Sbjct: 175 ccgctcccgcgcgtcgaggggctccccaacggcgccgagtctacccacaacgtccc 230
>dbj|AK121682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070B15, full insert sequence Length = 1510 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 96 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 155 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 156 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 199 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 255 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 314 Query: 337 acgtccc 343 ||||||| Sbjct: 315 acgtccc 321 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 344 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 394
>dbj|AK119905.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-D10, full insert sequence Length = 1750 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 173 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 232 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 233 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 276 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 332 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 391 Query: 337 acgtccc 343 ||||||| Sbjct: 392 acgtccc 398 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 421 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 471
>dbj|AK105398.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-C05, full insert sequence Length = 1639 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 69 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 128 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 129 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 172 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 228 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 287 Query: 337 acgtccc 343 ||||||| Sbjct: 288 acgtccc 294 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 317 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 367
>dbj|AK063307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F11, full insert sequence Length = 1689 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 130 tcgtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagc 189 |||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||| Sbjct: 1439 tcgtgatctgcccgtggctcgccttcggccacctgctcccgtgcctcgacctcgcccagc 1380 Query: 190 ggctcgcctcccggggccaccgcgtgtcctacgtctccacgccg 233 | ||||| || ||||||||||||||||| | ||||||||||||| Sbjct: 1379 gcctcgcgtcgcggggccaccgcgtgtcgttcgtctccacgccg 1336 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 277 tcgtcgcgctcccgctgccgcgcgtggacggcctccccgacggcgccgagtccaccaacg 336 |||| ||||| ||||| |||||||| || || |||||||||||||||||||||||||||| Sbjct: 1280 tcgtggcgctgccgctcccgcgcgtcgaggggctccccgacggcgccgagtccaccaacg 1221 Query: 337 acgtccc 343 ||||||| Sbjct: 1220 acgtccc 1214 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 ||||||||| ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 1191 gagctccaccggagggccttcgacgggctcgccgcgcccttctcggagttc 1141
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 132 gtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcgg 191 |||||| |||| ||||||||| | |||||||||||||| | ||| |||||||| ||||| Sbjct: 5920243 gtgatcttcccatggctcgcgttcggccacctgctcccttacctcgagctcgcggagcgc 5920184 Query: 192 ctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgttacctcgcgcgcctc 251 | || || || |||||||||||||||| |||||||||||| | |||||||||||||| Sbjct: 5920183 gtggcgtcgcgtggccaccgcgtgtccttcgtctccacgccacgcaacctcgcgcgcctc 5920124 Query: 252 ccg 254 ||| Sbjct: 5920123 ccg 5920121 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Minus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccgcc 416 ||||||| ||||||||||||||||| |||||||||||| ||||||| |||||||| |||| Sbjct: 5920078 gagctcctctggaaggccttcgacgccctcgccgcgccgttcgcggagttcctgggcgcc 5920019 Query: 417 gcctgcgtcggcgaggccacgaggcctcactgggtagtcgccgacaccttccaccactgg 476 || |||| || || | | ||||||| | ||| | |||||||||| |||||||||||| Sbjct: 5920018 gcgtgcgacgccgccggcgagaggcctgattggatcatcgccgacacgttccaccactgg 5919959 Query: 477 g 477 | Sbjct: 5919958 g 5919958
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 132 gtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcgg 191 |||||| |||| ||||||||| | |||||||||||||| | ||| |||||||| ||||| Sbjct: 41895 gtgatcttcccatggctcgcgttcggccacctgctcccttacctcgagctcgcggagcgc 41836 Query: 192 ctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgttacctcgcgcgcctc 251 | || || || |||||||||||||||| |||||||||||| | |||||||||||||| Sbjct: 41835 gtggcgtcgcgtggccaccgcgtgtccttcgtctccacgccacgcaacctcgcgcgcctc 41776 Query: 252 ccg 254 ||| Sbjct: 41775 ccg 41773 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Minus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccgcc 416 ||||||| ||||||||||||||||| |||||||||||| ||||||| |||||||| |||| Sbjct: 41730 gagctcctctggaaggccttcgacgccctcgccgcgccgttcgcggagttcctgggcgcc 41671 Query: 417 gcctgcgtcggcgaggccacgaggcctcactgggtagtcgccgacaccttccaccactgg 476 || |||| || || | | ||||||| | ||| | |||||||||| |||||||||||| Sbjct: 41670 gcgtgcgacgccgccggcgagaggcctgattggatcatcgccgacacgttccaccactgg 41611 Query: 477 g 477 | Sbjct: 41610 g 41610
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 132 gtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcgg 191 |||||| |||| ||||||||| | |||||||||||||| | ||| |||||||| ||||| Sbjct: 121018 gtgatcttcccatggctcgcgttcggccacctgctcccttacctcgagctcgcggagcgc 120959 Query: 192 ctcgcctcccggggccaccgcgtgtcctacgtctccacgccgtgttacctcgcgcgcctc 251 | || || || |||||||||||||||| |||||||||||| | |||||||||||||| Sbjct: 120958 gtggcgtcgcgtggccaccgcgtgtccttcgtctccacgccacgcaacctcgcgcgcctc 120899 Query: 252 ccg 254 ||| Sbjct: 120898 ccg 120896 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Minus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccgcc 416 ||||||| ||||||||||||||||| |||||||||||| ||||||| |||||||| |||| Sbjct: 120853 gagctcctctggaaggccttcgacgccctcgccgcgccgttcgcggagttcctgggcgcc 120794 Query: 417 gcctgcgtcggcgaggccacgaggcctcactgggtagtcgccgacaccttccaccactgg 476 || |||| || || | | ||||||| | ||| | |||||||||| |||||||||||| Sbjct: 120793 gcgtgcgacgccgccggcgagaggcctgattggatcatcgccgacacgttccaccactgg 120734 Query: 477 g 477 | Sbjct: 120733 g 120733
>ref|XM_477034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccgccgcctgcg 423 |||||| |||||||||||||||||||||||||| | ||||| |||| |||||||| Sbjct: 345 gaaggcgttcgacggcctcgccgcgcccttcgccgcattcctcgccgacgcctgcg 400
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccgccgcctgcg 423 |||||| |||||||||||||||||||||||||| | ||||| |||| |||||||| Sbjct: 5529986 gaaggcgttcgacggcctcgccgcgcccttcgccgcattcctcgccgacgcctgcg 5530041 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgccctt 397 |||||| ||||||||||||||||||||||| Sbjct: 5512973 gaaggcgttcgacggcctcgccgcgccctt 5513002 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgc 400 |||||| ||||||||||||||||| |||||||| Sbjct: 5523200 gaaggcgttcgacggcctcgccgctcccttcgc 5523232
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccgccgcctgcg 423 |||||| |||||||||||||||||||||||||| | ||||| |||| |||||||| Sbjct: 43071 gaaggcgttcgacggcctcgccgcgcccttcgccgcattcctcgccgacgcctgcg 43126 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgccctt 397 |||||| ||||||||||||||||||||||| Sbjct: 26058 gaaggcgttcgacggcctcgccgcgccctt 26087 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgc 400 |||||| ||||||||||||||||| |||||||| Sbjct: 36285 gaaggcgttcgacggcctcgccgctcccttcgc 36317
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 132 gtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcgg 191 |||||| |||| ||||||||| | |||||| ||||||| | ||| |||||||| ||||| Sbjct: 40777 gtgatcttcccatggctcgcgttcggccacgtgctcccttacctagagctcgcagagcgc 40718 Query: 192 ctcgcctcccggggccaccgcgtgtcctacgtctc 226 | || || || |||||||||||||||| |||||| Sbjct: 40717 gtggcatcgcgtggccaccgcgtgtccttcgtctc 40683
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 132 gtgatcgtcccgtggctcgcgctgggccacctgctcccgtgcctggagctcgccgagcgg 191 |||||| |||| ||||||||| | |||||| ||||||| | ||| |||||||| ||||| Sbjct: 6620336 gtgatcttcccatggctcgcgttcggccacgtgctcccttacctagagctcgcagagcgc 6620277 Query: 192 ctcgcctcccggggccaccgcgtgtcctacgtctc 226 | || || || |||||||||||||||| |||||| Sbjct: 6620276 gtggcatcgcgtggccaccgcgtgtccttcgtctc 6620242 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgccgggtcctcctcctcgccg 122 |||||||||||||||||||||| Sbjct: 24722948 cgccgggtcctcctcctcgccg 24722927
>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018N12, complete sequence Length = 137127 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 |||||| || ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 57031 gagctctaccggagggccttcgacgggctcgccgcgcccttctcggagttc 56981
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 |||||| || ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 5100682 gagctctaccggagggccttcgacgggctcgccgcgcccttctcggagttc 5100732
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 |||||||| ||||||||||||||| || ||||||| |||||| |||| Sbjct: 129606 gaaggcctgcgacggcctcgccgccccgttcgcggcgttcctcgccg 129652
>dbj|AK109780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B12, full insert sequence Length = 1580 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 |||||||| ||||||||||||||| || ||||||| |||||| |||| Sbjct: 1113 gaaggcctgcgacggcctcgccgccccgttcgcggcgttcctcgccg 1067
>dbj|AK106930.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C02, full insert sequence Length = 1823 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgcggggttcctggccg 414 |||||||| ||||||||||||||| || ||||||| |||||| |||| Sbjct: 339 gaaggcctgcgacggcctcgccgccccgttcgcggcgttcctcgccg 385
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 357 gagctccactggaaggccttcgacggcctcgccgcgcccttcgcggggttc 407 |||||| || ||| |||||||||||| ||||||||||||||| ||| |||| Sbjct: 5167159 gagctctaccggagggccttcgacgggctcgccgcgcccttctcggagttc 5167209
>ref|XM_477031.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1524 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgccctt 397 |||||| ||||||||||||||||||||||| Sbjct: 336 gaaggcgttcgacggcctcgccgcgccctt 365
>dbj|AK099049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148N11, full insert sequence Length = 1760 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgccctt 397 |||||| ||||||||||||||||||||||| Sbjct: 380 gaaggcgttcgacggcctcgccgcgccctt 409
>dbj|AK066462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A01, full insert sequence Length = 1761 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgccctt 397 |||||| ||||||||||||||||||||||| Sbjct: 382 gaaggcgttcgacggcctcgccgcgccctt 411
>dbj|AK105137.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B03, full insert sequence Length = 926 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgc 400 |||||| |||||||||||||||| ||||||||| Sbjct: 374 gaaggcgttcgacggcctcgccgtgcccttcgc 406
>dbj|AK061074.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D07, full insert sequence Length = 1785 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 368 gaaggccttcgacggcctcgccgcgcccttcgc 400 |||||| |||||||||||||||| ||||||||| Sbjct: 369 gaaggcgttcgacggcctcgccgtgcccttcgc 401
>ref|XM_473020.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgccgggtcctcctcctcgccg 122 |||||||||||||||||||||| Sbjct: 522 cgccgggtcctcctcctcgccg 501
>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19, complete sequence Length = 141368 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 gccgccggcgccgcgcgtggag 275 |||||||||||||||||||||| Sbjct: 100500 gccgccggcgccgcgcgtggag 100479
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cctcccgccgccggcgccgcgc 269 |||||||||||||||||||||| Sbjct: 48939 cctcccgccgccggcgccgcgc 48918
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 gccgccggcgccgcgcgtggag 275 |||||||||||||||||||||| Sbjct: 3779570 gccgccggcgccgcgcgtggag 3779549 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 gcgcgcctcccgccgccggcgccg 266 |||||||||||||||||| ||||| Sbjct: 8775818 gcgcgcctcccgccgccgccgccg 8775795 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gcgcgtggacggcctccccg 315 |||||||||||||||||||| Sbjct: 5231395 gcgcgtggacggcctccccg 5231376 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ctcgcgcgcctcccgccgcc 259 |||||||||||||||||||| Sbjct: 4879342 ctcgcgcgcctcccgccgcc 4879323
>gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, complete sequence Length = 195558 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgcctcccgccgccggcgccgc 267 |||||||||||||||||||||| Sbjct: 88212 cgcctcccgccgccggcgccgc 88191
>dbj|AK105515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F03, full insert sequence Length = 1390 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 gccgccggcgccgcgcgtggag 275 |||||||||||||||||||||| Sbjct: 284 gccgccggcgccgcgcgtggag 263
>emb|AJ512371.1|PMA512371 Panicum maximum partial mRNA for NADP-dependant malate dehydrogenase (nadp-mdh gene) Length = 1269 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 gcgcctcccgccgccggcgccgcgcg 270 ||||||| |||||||||||||||||| Sbjct: 25 gcgcctctcgccgccggcgccgcgcg 50
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgccgggtcctcctcctcgccg 122 |||||||||||||||||||||| Sbjct: 112471 cgccgggtcctcctcctcgccg 112450
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete sequence Length = 235868 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgcctcccgccgccggcgccgc 267 |||||||||||||||||||||| Sbjct: 22009 cgcctcccgccgccggcgccgc 21988
>ref|NM_190626.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1848 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 gcctcccgccgccggcgccgc 267 ||||||||||||||||||||| Sbjct: 358 gcctcccgccgccggcgccgc 338
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gagctcgccgagcggctcgcc 197 ||||||||||||||||||||| Sbjct: 588141 gagctcgccgagcggctcgcc 588121
>gb|AC134908.5| Mus musculus BAC clone RP23-377L13 from chromosome 17, complete sequence Length = 189458 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccggcgccgcgcgtg 272 ||||||||||||||||||||| Sbjct: 182972 ccgccgccggcgccgcgcgtg 182952
>ref|XM_850791.1| PREDICTED: Canis familiaris hypothetical protein LOC606821 (LOC606821), partial mRNA Length = 843 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggcctccccgacggcgccgag 326 ||||||||||||||||||||| Sbjct: 499 ggcctccccgacggcgccgag 519
>gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome 17, complete sequence Length = 231245 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ccgccgccggcgccgcgcgtg 272 ||||||||||||||||||||| Sbjct: 224332 ccgccgccggcgccgcgcgtg 224352
>gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 233648 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccggcgccgcgcgtg 272 ||||||||||||||||||||| Sbjct: 28526 ccgccgccggcgccgcgcgtg 28506
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 gcctcccgccgccggcgccgc 267 ||||||||||||||||||||| Sbjct: 36640584 gcctcccgccgccggcgccgc 36640604 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 cgcccttcgcggggttcctggccg 414 ||||||||||||||||||| |||| Sbjct: 30872549 cgcccttcgcggggttcctcgccg 30872572
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 cctcgcgcgcctcccgccgccggcg 263 |||||||| |||||||||||||||| Sbjct: 4601216 cctcgcgctcctcccgccgccggcg 4601240
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 gcctcccgccgccggcgccgc 267 ||||||||||||||||||||| Sbjct: 113850 gcctcccgccgccggcgccgc 113870
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cgctgggccacctgctcccgt 171 ||||||||||||||||||||| Sbjct: 4000533 cgctgggccacctgctcccgt 4000553 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 gctcgtcgcgctcccgctgc 294 |||||||||||||||||||| Sbjct: 1824353 gctcgtcgcgctcccgctgc 1824334
>dbj|AK100337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081E01, full insert sequence Length = 2693 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 gcctcccgccgccggcgccgc 267 ||||||||||||||||||||| Sbjct: 695 gcctcccgccgccggcgccgc 675
>dbj|AK071217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085L22, full insert sequence Length = 1301 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 gcctcccgccgccggcgccgc 267 ||||||||||||||||||||| Sbjct: 374 gcctcccgccgccggcgccgc 354
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 cagcgccgggtcctcctcctcgccg 122 |||||||||||| |||||||||||| Sbjct: 2319613 cagcgccgggtcttcctcctcgccg 2319637
>ref|XM_469828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gcctcccgccgccggcgccg 266 |||||||||||||||||||| Sbjct: 334 gcctcccgccgccggcgccg 315
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 gcgcgcctcccgccgccggcgccg 266 |||||||||||||||||| ||||| Sbjct: 108260 gcgcgcctcccgccgccgccgccg 108237
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gcgcgtggacggcctccccg 315 |||||||||||||||||||| Sbjct: 145898 gcgcgtggacggcctccccg 145879
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cctcccgccgccggcgccgc 267 |||||||||||||||||||| Sbjct: 68865 cctcccgccgccggcgccgc 68846
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gcctcccgccgccggcgccg 266 |||||||||||||||||||| Sbjct: 117606 gcctcccgccgccggcgccg 117625
>gb|AC166563.2| Spironucleus vortens clone JGIBAWF-9G17, complete sequence Length = 40267 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 ctcgcgcgcctcccgccgccggcgccgc 267 ||||||||| |||||| ||||||||||| Sbjct: 20000 ctcgcgcgcttcccgcagccggcgccgc 20027 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 ctcgcgcgcctcccgccgccggcgccgc 267 ||||||||| |||||| ||||||||||| Sbjct: 18660 ctcgcgcgcttcccgcagccggcgccgc 18687 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 ctcgcgcgcctcccgccgccggcgccgc 267 ||||||||| |||||| ||||||||||| Sbjct: 17320 ctcgcgcgcttcccgcagccggcgccgc 17347
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctcccgccgccggcgcc 265 |||||||||||||||||||| Sbjct: 53640 cgcctcccgccgccggcgcc 53659
>emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on chromosome 13 Contains a novel heterogeneous nuclear ribonucleoprotein family A protein and a novel gene, complete sequence Length = 168897 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 acagagcacagtccaagtgg 64 |||||||||||||||||||| Sbjct: 59710 acagagcacagtccaagtgg 59729
>emb|AL138796.6| Human DNA sequence from clone RP4-791M13 on chromosome 1 Contains the 3' end of a novel gene and the 3' end of the PDE4DIP gene for phosphodiesterase 4D interacting protein (myomegalin), complete sequence Length = 120928 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tgagcttaccagtgaacacgaaca 47 |||||||||| ||||||||||||| Sbjct: 57824 tgagcttacctgtgaacacgaaca 57847
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 agctcgccgagcggctcgcc 197 |||||||||||||||||||| Sbjct: 342388 agctcgccgagcggctcgcc 342369
>gb|AC093920.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1725_E07, complete sequence Length = 87244 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gcgcgtggacggcctccccg 315 |||||||||||||||||||| Sbjct: 46677 gcgcgtggacggcctccccg 46658
>gb|AF257215.2| Brevibacterium sp. HCU cyclohexanone oxidation gene cluster 2, complete sequence Length = 11471 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 ggccttcgacggcctcgccg 390 |||||||||||||||||||| Sbjct: 8611 ggccttcgacggcctcgccg 8630
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctcccgccgccggcgcc 265 |||||||||||||||||||| Sbjct: 26280 cgcctcccgccgccggcgcc 26261
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgcctcccgccgccggcgccgcgc 269 |||| ||||||||||||||||||| Sbjct: 106662 cgccgcccgccgccggcgccgcgc 106685
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gacgtcccggcacaccagcg 355 |||||||||||||||||||| Sbjct: 2323586 gacgtcccggcacaccagcg 2323567 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 agctcgccgagcggctcgcc 197 |||||||||||||||||||| Sbjct: 1834619 agctcgccgagcggctcgcc 1834600
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cgtcgcgctcccgctgccgc 297 |||||||||||||||||||| Sbjct: 916597 cgtcgcgctcccgctgccgc 916578
>tpg|BK000307.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M29, complete sequence Length = 1222 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cgcctcccgccgccggcgccgcgc 269 |||| ||||||||||||||||||| Sbjct: 745 cgccgcccgccgccggcgccgcgc 722
>emb|BX932349.2| Gallus gallus finished cDNA, clone ChEST359h10 Length = 971 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcgcgcgcctcccgccgccg 260 |||||||||||||||||||| Sbjct: 37 tcgcgcgcctcccgccgccg 18
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cctcccgccgccggcgccgc 267 |||||||||||||||||||| Sbjct: 11188048 cctcccgccgccggcgccgc 11188029
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 cgcccttcgcggggttcctggccg 414 ||||||||||||||||||| |||| Sbjct: 72916 cgcccttcgcggggttcctcgccg 72939
>emb|BX929422.1| Gallus gallus finished cDNA, clone ChEST985g7 Length = 2071 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcgcgcgcctcccgccgccg 260 |||||||||||||||||||| Sbjct: 40 tcgcgcgcctcccgccgccg 21
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 gccggcgccgcgcgtggagctcgtcgcgctcc 288 |||||||| |||||||||||||| ||||||| Sbjct: 4788928 gccggcgcagcgcgtggagctcgatgcgctcc 4788959
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tcccgccgccggcgccgcgc 269 |||||||||||||||||||| Sbjct: 7104983 tcccgccgccggcgccgcgc 7104964
>dbj|AP004134.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_C12 Length = 116758 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gcgcgcctcccgccgccggcgccg 266 |||||||||||||||||| ||||| Sbjct: 43237 gcgcgcctcccgccgccgccgccg 43260
>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042H24 Length = 186313 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cctcccgccgccggcgccgc 267 |||||||||||||||||||| Sbjct: 23220 cctcccgccgccggcgccgc 23201
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cctcccgccgccggcgccgc 267 |||||||||||||||||||| Sbjct: 146855 cctcccgccgccggcgccgc 146836
>gb|AE005108.1| Halobacterium sp. NRC-1 section 139 of 170 of the complete genome Length = 10914 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 gctccactggaaggccttcgacgg 382 ||||||| |||||||||||||||| Sbjct: 7902 gctccacgggaaggccttcgacgg 7925
>dbj|AK066091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055M21, full insert sequence Length = 1010 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctcccgccgccggcgcc 265 |||||||||||||||||||| Sbjct: 249 cgcctcccgccgccggcgcc 268
>dbj|AK065335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H01, full insert sequence Length = 1724 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cctcccgccgccggcgccgc 267 |||||||||||||||||||| Sbjct: 55 cctcccgccgccggcgccgc 74
>dbj|AK060665.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C01, full insert sequence Length = 1226 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcctcctcctcgccgctgcg 127 |||||||||||||||||||| Sbjct: 673 tcctcctcctcgccgctgcg 654
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cccgctgccgcgcgtggacg 306 |||||||||||||||||||| Sbjct: 386889 cccgctgccgcgcgtggacg 386908
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gcctggagctcgccgagcgg 191 |||||||||||||||||||| Sbjct: 1621269 gcctggagctcgccgagcgg 1621250
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcctcctcctcgccgctgcg 127 |||||||||||||||||||| Sbjct: 132116 tcctcctcctcgccgctgcg 132097
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ctcgcgcgcctcccgccgcc 259 |||||||||||||||||||| Sbjct: 151750 ctcgcgcgcctcccgccgcc 151731 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,451,855 Number of Sequences: 3902068 Number of extensions: 3451855 Number of successful extensions: 77630 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72158 Number of HSP's gapped (non-prelim): 5467 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
