ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart34f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa820... 216 6e-53
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
3dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
4dbj|AK101642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
5dbj|AK064229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
6gb|AY108102.1| Zea mays PCO073188 mRNA sequence 76 1e-10
7gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome... 70 8e-09
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
9gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 48 0.031
10gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.48
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
12emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chr... 42 1.9
13gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide... 42 1.9
14gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, ... 40 7.4
15gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 7.4
16gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.4
17gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.4
18gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 7.4
19gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.4
20emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.4
21emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.4
22emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IR... 40 7.4
23gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.4
24gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswel... 40 7.4
25gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswel... 40 7.4
26gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 7.4
27ref|NM_206235.1| Drosophila melanogaster CG13921-RB, transcript ... 40 7.4
28ref|NM_139399.1| Drosophila melanogaster CG13921-RA, transcript ... 40 7.4
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
31gb|AF448145.2| Myxococcus xanthus che3 chemosensory regulator ge... 40 7.4
32dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 7.4
33dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
34gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 ... 40 7.4
35gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, r... 40 7.4
36gb|BT001721.1| Drosophila melanogaster RE69223 full insert cDNA 40 7.4
37gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
38dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 7.4

>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA
          Length = 996

 Score =  216 bits (109), Expect = 6e-53
 Identities = 151/165 (91%)
 Strand = Plus / Plus

                                                                       
Query: 375 gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtccactgg 434
           ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 229 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 288

                                                                       
Query: 435 ggcatcgctggcaacgccaacgaggacctccagatcggcgacgtcaccatccccgagtac 494
           |||||||| ||||||||| |||||| ||||||||||||||||||||||||||| ||| ||
Sbjct: 289 ggcatcgccggcaacgccgacgagggcctccagatcggcgacgtcaccatcccggagcac 348

                                                        
Query: 495 tgggcccacgtctccctctggaactggcagcgattcggcgacggc 539
           ||||| ||| |||||||||||||||||||||| | ||||||||||
Sbjct: 349 tgggcgcacctctccctctggaactggcagcgctacggcgacggc 393



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Plus

                                                                       
Query: 126 atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 185
           ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 43  atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 102

                                                                  
Query: 186 aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 237
           |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 103 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 156



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  216 bits (109), Expect = 6e-53
 Identities = 151/165 (91%)
 Strand = Plus / Minus

                                                                           
Query: 375     gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtccactgg 434
               ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 7185808 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 7185749

                                                                           
Query: 435     ggcatcgctggcaacgccaacgaggacctccagatcggcgacgtcaccatccccgagtac 494
               |||||||| ||||||||| |||||| ||||||||||||||||||||||||||| ||| ||
Sbjct: 7185748 ggcatcgccggcaacgccgacgagggcctccagatcggcgacgtcaccatcccggagcac 7185689

                                                            
Query: 495     tgggcccacgtctccctctggaactggcagcgattcggcgacggc 539
               ||||| ||| |||||||||||||||||||||| | ||||||||||
Sbjct: 7185688 tgggcgcacctctccctctggaactggcagcgctacggcgacggc 7185644



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                           
Query: 126     atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 185
               ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 7187148 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 7187089

                                                                      
Query: 186     aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 237
               |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 7187088 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 7187035



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                           
Query: 298     aagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatgacag 357
               |||| |||||||||||||| ||  |||| |  ||||||| ||| ||||||||||||||||
Sbjct: 7186079 aaggacgaaggtttcgcttcggtgccattgggggccaaaacgttgtcatggtcatgacag 7186020

                          
Query: 358     gactgagcatg 368
               | || ||||||
Sbjct: 7186019 ggcttagcatg 7186009



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>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score =  216 bits (109), Expect = 6e-53
 Identities = 151/165 (91%)
 Strand = Plus / Minus

                                                                         
Query: 375   gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtccactgg 434
             ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 80456 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 80397

                                                                         
Query: 435   ggcatcgctggcaacgccaacgaggacctccagatcggcgacgtcaccatccccgagtac 494
             |||||||| ||||||||| |||||| ||||||||||||||||||||||||||| ||| ||
Sbjct: 80396 ggcatcgccggcaacgccgacgagggcctccagatcggcgacgtcaccatcccggagcac 80337

                                                          
Query: 495   tgggcccacgtctccctctggaactggcagcgattcggcgacggc 539
             ||||| ||| |||||||||||||||||||||| | ||||||||||
Sbjct: 80336 tgggcgcacctctccctctggaactggcagcgctacggcgacggc 80292



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                         
Query: 126   atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 185
             ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 81796 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 81737

                                                                    
Query: 186   aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 237
             |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 81736 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 81683



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 298   aagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatgacag 357
             |||| |||||||||||||| ||  |||| |  ||||||| ||| ||||||||||||||||
Sbjct: 80727 aaggacgaaggtttcgcttcggtgccattgggggccaaaacgttgtcatggtcatgacag 80668

                        
Query: 358   gactgagcatg 368
             | || ||||||
Sbjct: 80667 ggcttagcatg 80657



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>dbj|AK101642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055L05, full
           insert sequence
          Length = 1387

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 98/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 418 agggcatcgtccactggggcatcgctggcaacgccaacgaggacctccagatcggcgacg 477
           |||||||||||||||  |||||||| ||||||||| ||   |||||||| ||||||||||
Sbjct: 520 agggcatcgtccacttcggcatcgccggcaacgccgaccccgacctccacatcggcgacg 579

                                                                     
Query: 478 tcaccatccccgagtactgggcccacgtctccctctggaactggcagcgattcggcga 535
           ||||| |||||   |||||||| |||  |   ||||||||||||||||| | ||||||
Sbjct: 580 tcaccgtcccccgctactgggcgcacaccggactctggaactggcagcggtacggcga 637



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>dbj|AK064229.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H04, full
           insert sequence
          Length = 1470

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 98/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 418 agggcatcgtccactggggcatcgctggcaacgccaacgaggacctccagatcggcgacg 477
           |||||||||||||||  |||||||| ||||||||| ||   |||||||| ||||||||||
Sbjct: 603 agggcatcgtccacttcggcatcgccggcaacgccgaccccgacctccacatcggcgacg 662

                                                                     
Query: 478 tcaccatccccgagtactgggcccacgtctccctctggaactggcagcgattcggcga 535
           ||||| |||||   |||||||| |||  |   ||||||||||||||||| | ||||||
Sbjct: 663 tcaccgtcccccgctactgggcgcacaccggactctggaactggcagcggtacggcga 720



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>gb|AY108102.1| Zea mays PCO073188 mRNA sequence
          Length = 408

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 104/126 (82%)
 Strand = Plus / Plus

                                                                       
Query: 113 ggcggtgacgctaatggccacggcggcggaggggtacatcactcagaagacgtgggcagc 172
           |||||||  ||| ||||| |||||| ||||||| | |||| |  |||||||||||   ||
Sbjct: 166 ggcggtggtgctcatggcaacggcgtcggagggcttcatctccaagaagacgtggagcgc 225

                                                                       
Query: 173 catccgccgggcgaaccgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacga 232
           |||||| |||||| |||||| |||||| ||||| || || || ||||||||| |||||||
Sbjct: 226 catccggcgggcggaccgcgacgggcccttcgtggggctggtggtgcccaacgcctacga 285

                 
Query: 233 gatggt 238
           ||||||
Sbjct: 286 gatggt 291



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 295 tccaagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatga 354
           ||||||||||| | || ||||| ||||| || | | |||||| ||| |||||||||||||
Sbjct: 348 tccaagggcgacgattccgcttcggaactattggaagccaaaacgttgtcatggtcatga 407

            
Query: 355 c 355
           |
Sbjct: 408 c 408



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>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10,
              complete sequence
          Length = 138209

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                          
Query: 418    agggcatcgtccactggggcatcgctggcaacgccaacgaggacctccagatcggcgacg 477
              |||||||||||||||  |||||||| ||||||||| ||   |||||||| ||||||||||
Sbjct: 112447 agggcatcgtccacttcggcatcgccggcaacgccgaccccgacctccacatcggcgacg 112388

                                                             
Query: 478    tcaccatccccgagtactgggcccacgtctccctctggaactggcag 524
              ||||| |||||   |||||||| |||  |   |||||||||||||||
Sbjct: 112387 tcaccgtcccccgctactgggcgcacaccggactctggaactggcag 112341



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                           
Query: 418     agggcatcgtccactggggcatcgctggcaacgccaacgaggacctccagatcggcgacg 477
               |||||||||||||||  |||||||| ||||||||| ||   |||||||| ||||||||||
Sbjct: 7676052 agggcatcgtccacttcggcatcgccggcaacgccgaccccgacctccacatcggcgacg 7675993

                                                              
Query: 478     tcaccatccccgagtactgggcccacgtctccctctggaactggcag 524
               ||||| |||||   |||||||| |||  |   |||||||||||||||
Sbjct: 7675992 tcaccgtcccccgctactgggcgcacaccggactctggaactggcag 7675946



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 198     ccgttcgtcggcctcgtcgtgcccaaca 225
               |||||||||||||||||||| |||||||
Sbjct: 4982931 ccgttcgtcggcctcgtcgtccccaaca 4982958



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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 112    tggcggtgacgctaatggccacggcggcgg 141
              ||||||| ||||||||||||| ||||||||
Sbjct: 128654 tggcggtcacgctaatggccaaggcggcgg 128683



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 112      tggcggtgacgctaatggccacggcggcgg 141
                ||||||| ||||||||||||| ||||||||
Sbjct: 18486224 tggcggtcacgctaatggccaaggcggcgg 18486253



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>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 203279

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 391    agatgctgctgagcctgttcc 411
              |||||||||||||||||||||
Sbjct: 132755 agatgctgctgagcctgttcc 132735



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>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   tggccacggcggcggaggggt 147
             |||||||||||||||||||||
Sbjct: 27070 tggccacggcggcggaggggt 27090



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>gb|AC123528.2| Oryza sativa chromosome 11 clone  OSJNBa0078E03, complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ggccacggcggcggaggggt 147
              ||||||||||||||||||||
Sbjct: 122382 ggccacggcggcggaggggt 122401



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    ggccacggcggcggaggggt 147
              ||||||||||||||||||||
Sbjct: 117551 ggccacggcggcggaggggt 117532



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 391     agatgctgctgagcctgttc 410
               ||||||||||||||||||||
Sbjct: 1737145 agatgctgctgagcctgttc 1737126



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 201     ttcgtcggcctcgtcgtgcc 220
               ||||||||||||||||||||
Sbjct: 2901101 ttcgtcggcctcgtcgtgcc 2901082



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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 155     tcagaagacgtgggcagccatccgccgg 182
               ||||||||| |||||| |||||||||||
Sbjct: 3462345 tcagaagacttgggcaaccatccgccgg 3462372



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 179     ccgggcgaaccgcgccgggc 198
               ||||||||||||||||||||
Sbjct: 2930937 ccgggcgaaccgcgccgggc 2930956



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   ccgggcgaaccgcgccgggc 198
             ||||||||||||||||||||
Sbjct: 58310 ccgggcgaaccgcgccgggc 58329



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>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 198    ccgttcgtcggcctcgtcgtgcccaaca 225
              ||||||||||| |||||||| |||||||
Sbjct: 260525 ccgttcgtcgggctcgtcgtccccaaca 260498



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 179     ccgggcgaaccgcgccgggc 198
               ||||||||||||||||||||
Sbjct: 3903912 ccgggcgaaccgcgccgggc 3903931



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>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and
             OCTN1 gene (partial)
          Length = 113629

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 328   aaggccaaagcgtcgtcatggtca 351
             ||||||||| ||||||||||||||
Sbjct: 98145 aaggccaaaacgtcgtcatggtca 98168



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     gaaccgcgccgggccgttcg 204
               ||||||||||||||||||||
Sbjct: 3054010 gaaccgcgccgggccgttcg 3053991



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>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177583

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    agtcgcccagcttcgtggcc 269
              ||||||||||||||||||||
Sbjct: 139683 agtcgcccagcttcgtggcc 139702



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>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   agtcgcccagcttcgtggcc 269
             ||||||||||||||||||||
Sbjct: 26990 agtcgcccagcttcgtggcc 27009



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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    ttcgtcggcctcgtcgtgcc 220
              ||||||||||||||||||||
Sbjct: 294762 ttcgtcggcctcgtcgtgcc 294781



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>ref|NM_206235.1| Drosophila melanogaster CG13921-RB, transcript variant B (CG13921),
            mRNA
          Length = 4265

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  agtcgcccagcttcgtggcc 269
            ||||||||||||||||||||
Sbjct: 3389 agtcgcccagcttcgtggcc 3408



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>ref|NM_139399.1| Drosophila melanogaster CG13921-RA, transcript variant A (CG13921),
            mRNA
          Length = 4857

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  agtcgcccagcttcgtggcc 269
            ||||||||||||||||||||
Sbjct: 3971 agtcgcccagcttcgtggcc 3990



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     ggccacggcggcggaggggt 147
               ||||||||||||||||||||
Sbjct: 1758208 ggccacggcggcggaggggt 1758227



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 254      gcccagcttcgtggccagcaagagcatc 281
                ||||||||||||||| | ||||||||||
Sbjct: 18607119 gcccagcttcgtggcaaacaagagcatc 18607146



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>gb|AF448145.2| Myxococcus xanthus che3 chemosensory regulator gene cluster, complete
             sequence
          Length = 17906

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tcgcccagcttcgtggccag 271
             ||||||||||||||||||||
Sbjct: 17872 tcgcccagcttcgtggccag 17891



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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    agcttcgtggccagcaagag 277
              ||||||||||||||||||||
Sbjct: 478483 agcttcgtggccagcaagag 478502



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>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0020P04
          Length = 153894

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 254   gcccagcttcgtggccagcaagagcatc 281
             ||||||||||||||| | ||||||||||
Sbjct: 59222 gcccagcttcgtggcaaacaagagcatc 59249



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>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete
              sequence
          Length = 303191

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    agtcgcccagcttcgtggcc 269
              ||||||||||||||||||||
Sbjct: 216811 agtcgcccagcttcgtggcc 216830



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>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones
              DS02777, DS03222, DS02345, and DS04808, complete sequence
          Length = 257867

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    agtcgcccagcttcgtggcc 269
              ||||||||||||||||||||
Sbjct: 139977 agtcgcccagcttcgtggcc 139996



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>gb|BT001721.1| Drosophila melanogaster RE69223 full insert cDNA
          Length = 4287

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  agtcgcccagcttcgtggcc 269
            ||||||||||||||||||||
Sbjct: 3388 agtcgcccagcttcgtggcc 3407



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     ggccacggcggcggaggggt 147
               ||||||||||||||||||||
Sbjct: 1755929 ggccacggcggcggaggggt 1755948



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>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108,
             complete sequence
          Length = 117124

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    tcatggccgtcgtcctcgtg 113
             ||||||||||||||||||||
Sbjct: 55182 tcatggccgtcgtcctcgtg 55201


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,273,805
Number of Sequences: 3902068
Number of extensions: 3273805
Number of successful extensions: 68942
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67806
Number of HSP's gapped (non-prelim): 1131
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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