ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart34d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CATR_ATRNU (P41210) Caltractin (Centrin) 34 0.21
2CDPK_DAUCA (P28582) Calcium-dependent protein kinase (EC 2.7.11.... 30 3.0
3CDC31_YEAST (P06704) Cell division control protein 31 (Nucleopor... 30 5.1
4SPE2A_STRPU (P04110) SPEC 2A protein 30 5.1
5TRPD_ERWCT (Q6D4U2) Anthranilate phosphoribosyltransferase (EC 2... 29 6.7
6GPI16_YEAST (P38875) GPI transamidase component GPI16 precursor 29 6.7
7CDPK1_ARATH (Q06850) Calcium-dependent protein kinase, isoform A... 29 6.7

>CATR_ATRNU (P41210) Caltractin (Centrin)|
          Length = 167

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
 Frame = +1

Query: 226 HETEAEREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACXXXXXX 405
           H    ++   I+  F  FDT G G +D  ++   + AL      +   +++         
Sbjct: 17  HGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 76

Query: 406 XXXXXXXXXXMD------DKELELYRIFQAIDVEHNGCILPEE 516
                     M       D + EL + F+ ID ++NG I PE+
Sbjct: 77  AIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPED 119



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>CDPK_DAUCA (P28582) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK)|
          Length = 532

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
 Frame = +1

Query: 214 LLALHETEAEREAR-IRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRAC- 387
           L  + E+ +E E + +++MF   DT   G + Y ++++GLA L         ++L+ A  
Sbjct: 372 LKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMDAAD 431

Query: 388 XXXXXXXXXXXXXXXXMDDKELELY--RIFQAIDVEHNGCILPEE 516
                           M   +LE Y  + FQ  D +++G I  +E
Sbjct: 432 VDGNGTIDYLEFITATMHRHKLESYEHQAFQYFDKDNSGFITKDE 476



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>CDC31_YEAST (P06704) Cell division control protein 31 (Nucleoporin CDC31)|
           (Nuclear pore protein CDC31)
          Length = 161

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
 Frame = +1

Query: 241 EREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACXXXXXXXXXXX 420
           E++  I   F  FD +  G LDY +++  + AL      +   +L+              
Sbjct: 20  EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79

Query: 421 XXXXXMDDKEL------ELYRIFQAIDVEHNGCI 504
                M +K L      E+ R FQ  D +H G I
Sbjct: 80  DFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKI 113



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>SPE2A_STRPU (P04110) SPEC 2A protein|
          Length = 150

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 18/96 (18%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = +1

Query: 241 EREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACXXXXXXXXXXX 420
           E +A  ++ F   DT G G++   ++ A   ++++    +   E++              
Sbjct: 10  EEKALFKSSFKSEDTDGDGKITSEELRAAFKSIEIDLTQEKIDEMMGMVDKDGSKDMDFS 69

Query: 421 XXXXXMDD----KELELYRIFQAIDVEHNGCILPEE 516
                  +    +E++L + F  +D +HNG + P+E
Sbjct: 70  EFLMRKAEQWRGREVQLTKAFVDLDKDHNGSLSPQE 105



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>TRPD_ERWCT (Q6D4U2) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 355

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = +1

Query: 172 EPVRKAGPVTMEHVLLALHETEAEREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPA 351
           EP      +TM+H+L  L+   +      + +FG      RG+L+ +Q+ A L +++V  
Sbjct: 14  EPSTAQDVITMQHILEKLYGANSISRQESQALFGAII---RGELEASQLAAALISMKVRG 70

Query: 352 E 354
           E
Sbjct: 71  E 71



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>GPI16_YEAST (P38875) GPI transamidase component GPI16 precursor|
          Length = 602

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 199 TMEHVLLALHETEAEREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQV 345
           T    +  L E+ A R+  +R   GF+D    GQL +A  EAG + +++
Sbjct: 72  TFPRAIPPLLESTATRQFHLRFTRGFWDALSWGQLPHAGKEAGASGVEL 120



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>CDPK1_ARATH (Q06850) Calcium-dependent protein kinase, isoform AK1 (EC|
           2.7.11.1) (CDPK)
          Length = 610

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
 Frame = +1

Query: 214 LLALHETEAERE-ARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACX 390
           L  + E+ +E E A ++ MF   D    GQ+ + +++AGL  +    +     +L++A  
Sbjct: 441 LRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAAD 500

Query: 391 XXXXXX-----XXXXXXXXXMDDKELELYRIFQAIDVEHNGCILPEE 516
                                 ++E  L+  F   D + +G I P+E
Sbjct: 501 VDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 547


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,693,623
Number of Sequences: 219361
Number of extensions: 310029
Number of successful extensions: 1221
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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