Clone Name | bart34d05 |
---|---|
Clone Library Name | barley_pub |
>CATR_ATRNU (P41210) Caltractin (Centrin)| Length = 167 Score = 34.3 bits (77), Expect = 0.21 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 6/103 (5%) Frame = +1 Query: 226 HETEAEREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACXXXXXX 405 H ++ I+ F FDT G G +D ++ + AL + +++ Sbjct: 17 HGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 76 Query: 406 XXXXXXXXXXMD------DKELELYRIFQAIDVEHNGCILPEE 516 M D + EL + F+ ID ++NG I PE+ Sbjct: 77 AIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPED 119
>CDPK_DAUCA (P28582) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK)| Length = 532 Score = 30.4 bits (67), Expect = 3.0 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Frame = +1 Query: 214 LLALHETEAEREAR-IRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRAC- 387 L + E+ +E E + +++MF DT G + Y ++++GLA L ++L+ A Sbjct: 372 LKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMDAAD 431 Query: 388 XXXXXXXXXXXXXXXXMDDKELELY--RIFQAIDVEHNGCILPEE 516 M +LE Y + FQ D +++G I +E Sbjct: 432 VDGNGTIDYLEFITATMHRHKLESYEHQAFQYFDKDNSGFITKDE 476
>CDC31_YEAST (P06704) Cell division control protein 31 (Nucleoporin CDC31)| (Nuclear pore protein CDC31) Length = 161 Score = 29.6 bits (65), Expect = 5.1 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 6/94 (6%) Frame = +1 Query: 241 EREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACXXXXXXXXXXX 420 E++ I F FD + G LDY +++ + AL + +L+ Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79 Query: 421 XXXXXMDDKEL------ELYRIFQAIDVEHNGCI 504 M +K L E+ R FQ D +H G I Sbjct: 80 DFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKI 113
>SPE2A_STRPU (P04110) SPEC 2A protein| Length = 150 Score = 29.6 bits (65), Expect = 5.1 Identities = 18/96 (18%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Frame = +1 Query: 241 EREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACXXXXXXXXXXX 420 E +A ++ F DT G G++ ++ A ++++ + E++ Sbjct: 10 EEKALFKSSFKSEDTDGDGKITSEELRAAFKSIEIDLTQEKIDEMMGMVDKDGSKDMDFS 69 Query: 421 XXXXXMDD----KELELYRIFQAIDVEHNGCILPEE 516 + +E++L + F +D +HNG + P+E Sbjct: 70 EFLMRKAEQWRGREVQLTKAFVDLDKDHNGSLSPQE 105
>TRPD_ERWCT (Q6D4U2) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 355 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = +1 Query: 172 EPVRKAGPVTMEHVLLALHETEAEREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPA 351 EP +TM+H+L L+ + + +FG RG+L+ +Q+ A L +++V Sbjct: 14 EPSTAQDVITMQHILEKLYGANSISRQESQALFGAII---RGELEASQLAAALISMKVRG 70 Query: 352 E 354 E Sbjct: 71 E 71
>GPI16_YEAST (P38875) GPI transamidase component GPI16 precursor| Length = 602 Score = 29.3 bits (64), Expect = 6.7 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +1 Query: 199 TMEHVLLALHETEAEREARIRNMFGFFDTSGRGQLDYAQIEAGLAALQV 345 T + L E+ A R+ +R GF+D GQL +A EAG + +++ Sbjct: 72 TFPRAIPPLLESTATRQFHLRFTRGFWDALSWGQLPHAGKEAGASGVEL 120
>CDPK1_ARATH (Q06850) Calcium-dependent protein kinase, isoform AK1 (EC| 2.7.11.1) (CDPK) Length = 610 Score = 29.3 bits (64), Expect = 6.7 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Frame = +1 Query: 214 LLALHETEAERE-ARIRNMFGFFDTSGRGQLDYAQIEAGLAALQVPAECKYARELLRACX 390 L + E+ +E E A ++ MF D GQ+ + +++AGL + + +L++A Sbjct: 441 LRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAAD 500 Query: 391 XXXXXX-----XXXXXXXXXMDDKELELYRIFQAIDVEHNGCILPEE 516 ++E L+ F D + +G I P+E Sbjct: 501 VDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 547 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,693,623 Number of Sequences: 219361 Number of extensions: 310029 Number of successful extensions: 1221 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1203 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1221 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)