ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart34c12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 482 gacgagcgggtggtatggcaagtgcccgaccgacgcgctgaagctg 527 ||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 67095 gacgagcgggtggtacgggaagtgcccgacggacgcgctgaagctg 67050
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 482 gacgagcgggtggtatggcaagtgcccgaccgacgcgctgaagctg 527 ||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 21267264 gacgagcgggtggtacgggaagtgcccgacggacgcgctgaagctg 21267309 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 504 tgcccgaccgacgcgctgaagctg 527 ||||||| |||||||||||||||| Sbjct: 21139421 tgcccgatcgacgcgctgaagctg 21139398 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 500 caagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 21136812 caagtgcccgttcgacgcgctgaagctg 21136785
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 482 gacgagcgggtggtatggcaagtgcccgaccgacgcgctgaagctg 527 ||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 327 gacgagcgggtggtacgggaagtgcccgacggacgcgctgaagctg 372
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 482 gacgagcgggtggtatggcaagtgcccgaccgacgcgctgaagctg 527 ||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 21278528 gacgagcgggtggtacgggaagtgcccgacggacgcgctgaagctg 21278573 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 504 tgcccgaccgacgcgctgaagctg 527 ||||||| |||||||||||||||| Sbjct: 21150685 tgcccgatcgacgcgctgaagctg 21150662 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 500 caagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 21148076 caagtgcccgttcgacgcgctgaagctg 21148049
>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence Length = 156244 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 141785 gagaggtggtggcggtggaagtgg 141762
>ref|NM_016805.1| Mus musculus heterogeneous nuclear ribonucleoprotein U (Hnrpu), mRNA Length = 2600 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2292 gagaggtggtggcggtggaagtgg 2315
>dbj|AK145499.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0007J20 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3406 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2358 gagaggtggtggcggtggaagtgg 2381
>dbj|AK159084.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420001B22 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2901 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2324 gagaggtggtggcggtggaagtgg 2347
>dbj|AK145682.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029C11 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3404 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2358 gagaggtggtggcggtggaagtgg 2381
>dbj|AK159956.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420039N16 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3348 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2297 gagaggtggtggcggtggaagtgg 2320
>dbj|AK168657.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920041N14 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3341 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2297 gagaggtggtggcggtggaagtgg 2320
>dbj|AK159614.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025L06 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3404 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2360 gagaggtggtggcggtggaagtgg 2383
>dbj|AK167200.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0038M11 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3404 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2358 gagaggtggtggcggtggaagtgg 2381
>dbj|AK165844.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730006M20 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3670 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2355 gagaggtggtggcggtggaagtgg 2378
>dbj|AK089058.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430038A15 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2934 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2356 gagaggtggtggcggtggaagtgg 2379
>dbj|AK037517.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130023B09 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2594 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2298 gagaggtggtggcggtggaagtgg 2321
>dbj|AK029944.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932409F19 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2848 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2302 gagaggtggtggcggtggaagtgg 2325
>gb|BC018353.1| Mus musculus heterogeneous nuclear ribonucleoprotein U, mRNA (cDNA clone MGC:5768 IMAGE:3584692), complete cds Length = 3272 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2200 gagaggtggtggcggtggaagtgg 2223
>gb|AF073992.1|AF073992 Mus musculus heterogenous nuclear ribonucleoprotein U (hnRNP U) mRNA, complete cds Length = 2600 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 |||||||||||||||||||||||| Sbjct: 2292 gagaggtggtggcggtggaagtgg 2315
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 189690 aagtgcccgatcgacgcgctgaagctg 189716 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 186986 aagtgcccgatcgacgcgctgaagctg 187012
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 280 aagtgcccgatcgacgcgctgaagctg 306
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 26757 aagtgcccgatcgacgcgctgaagctg 26783 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 24053 aagtgcccgatcgacgcgctgaagctg 24079
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 123690 aagtgcccgatcgacgcgctgaagctg 123716 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 120986 aagtgcccgatcgacgcgctgaagctg 121012
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 189690 aagtgcccgatcgacgcgctgaagctg 189716 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 186986 aagtgcccgatcgacgcgctgaagctg 187012
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 75668 aagtgcccgatcgacgcgctgaagctg 75642 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 72964 aagtgcccgatcgacgcgctgaagctg 72938
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 301 aagtgcccgatcgacgcgctgaagctg 327
>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full insert sequence Length = 498 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 114 aagtgcccgatcgacgcgctgaagctg 140
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 aagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 262 aagtgcccgatcgacgcgctgaagctg 288
>emb|Z75543.1|CEK01D12 Caenorhabditis elegans Cosmid K01D12, complete sequence Length = 36974 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 gaggtggtggcggtggaagtgg 217 |||||||||||||||||||||| Sbjct: 26672 gaggtggtggcggtggaagtgg 26693
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 cctcttccttgcccttaacctcctct 117 |||||||||||||||| ||||||||| Sbjct: 19791 cctcttccttgcccttcacctcctct 19766
>ref|NM_073706.2| Caenorhabditis elegans K01D12.8 (K01D12.8) mRNA, complete cds Length = 420 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 gaggtggtggcggtggaagtgg 217 |||||||||||||||||||||| Sbjct: 242 gaggtggtggcggtggaagtgg 263
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 agcggtggcgggatcattggcggcgg 337 ||||||||||||| |||||||||||| Sbjct: 23421948 agcggtggcgggagcattggcggcgg 23421973
>emb|AJ893562.1| Amblysomus hottentotus partial ar gene for androgen receptor, exon 1 Length = 1419 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 ggtggtggcggtggaagtggca 219 |||||||||||||||||||||| Sbjct: 1279 ggtggtggcggtggaagtggca 1300
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 agcggtggcgggatcattggcggcgg 337 ||||||||||||| |||||||||||| Sbjct: 23350139 agcggtggcgggagcattggcggcgg 23350164
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 312 agcggtggcgggatcattggcggcgg 337 ||||||||||||| |||||||||||| Sbjct: 80211 agcggtggcgggagcattggcggcgg 80186
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtgcccgaccgacgcgctgaagctg 527 |||||||| |||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tggtggccacgggagcagagg 187 ||||||||||||||||||||| Sbjct: 648614 tggtggccacgggagcagagg 648594
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 gatcattggcggcggtcctggcggt 347 |||||| |||||||||||||||||| Sbjct: 3950925 gatcatcggcggcggtcctggcggt 3950949 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 gatcatcggcggcggtccaggcggt 374 |||||||||||||||||| |||||| Sbjct: 3950925 gatcatcggcggcggtcctggcggt 3950949
>ref|XM_426950.1| PREDICTED: Gallus gallus similar to zinc finger protein 499 (LOC429393), partial mRNA Length = 933 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 tggcggcggtcctggcggtgg 349 ||||||||||||||||||||| Sbjct: 876 tggcggcggtcctggcggtgg 856
>gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and CLIC1, DDAH, G6b, G6c, G5b, G6d, G6e, G6f, BAT5, G5b, CSK2B, BAT4, G4, Apo M, BAT3, BAT2, AIF-1, 1C7, LST-1, LTB, TNF, and LTA genes, complete cds Length = 184666 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtggaagtggcagcggc 224 |||||||||||||||||||| ||||| ||||| Sbjct: 129171 gggagaggtggtggcggtggcggtggcggcggc 129139
>ref|XM_568128.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL05960) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tggtggccacgggagcagagg 187 ||||||||||||||||||||| Sbjct: 73 tggtggccacgggagcagagg 53
>emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chromosome 6, complete sequence Length = 69009 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtggaagtggcagcggc 224 |||||||||||||||||||| ||||| ||||| Sbjct: 452 gggagaggtggtggcggtggcggtggcggcggc 484
>emb|BX248305.13| Human DNA sequence from clone DASS-82G15 on chromosome 6 Contains the UQCRHP1 pseudogene for ubiquinol-cytochrome c reductase hinge protein pseudogene 1, AIF1 gene for allograft inflammatory factor 1, the 5' end of the BAT2 gene for HLA-B associated transcript 2, and 1 CpG island, complete sequence Length = 16685 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtggaagtggcagcggc 224 |||||||||||||||||||| ||||| ||||| Sbjct: 15137 gggagaggtggtggcggtggcggtggcggcggc 15169
>emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chromosome 6 Contains the AIF1 gene for allograft inflammatory factor 1, the BAT2 genes for HLA-B associated transcript 2, the BAT3 gene for HLA-B associated transcript 3, the APOM gene for apolipoprotein M, the C6orf47 gene for chromosome 6 open reading frame 47, the BAT4 gene for HLA-B associated transcript 4, the CSNK2B gene for casein kinase 2, beta polypeptide, the LY6G5B gene for lymphocyte antigen 6 complex, locus G5B, the bQB195H10.12 gene for a novel protein, the LY6G5C gene for lymphocyte antigen 6 complex, locus G5C, the BAT5 gene for HLA-B associated transcript 5, the 5' end for LY6G6D gene for lymphocyte antigen 6 complex, locus G6D and 7 CpG islands, complete sequence Length = 99109 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtggaagtggcagcggc 224 |||||||||||||||||||| ||||| ||||| Sbjct: 9377 gggagaggtggtggcggtggcggtggcggcggc 9409
>emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on chromosome 6 contains a ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B associated transcript 1, the ATP6V1G gene for ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1 gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, the LTA gene for lymphotoxin alpha, the TNF gene for tumour necrosis factor, the LTB gene for lymphotoxin beta, the LST1 gene for leukocyte specific transcript 1, the LY117 gene for lymphocyte antigen 117, the AIF1 gene for alograft imflammatory factor 1, the BAT2 gene for HLA-B associated transcript 2, the BAT3 gene for HLA-B associated transcript 3, the APOM gene for apolipoprotein M, the 3' end of the gene for chromosome 6, open reading frame 47 and four CpG islands, complete sequence Length = 132330 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtggaagtggcagcggc 224 |||||||||||||||||||| ||||| ||||| Sbjct: 93572 gggagaggtggtggcggtggcggtggcggcggc 93604
>emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chromosome 6 contains the gene for a novel protein similar to similar to peptidyl-prolyl cis-trans isomerase A (PPIase), a ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B associated transcript 1, the ATP6V1G gene for ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1 gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, the LTA gene for lymphotoxin alpha, the TNF gene for tumour necrosis factor, the LTB gene for lymphotoxin beta, the LST1 gene for leukocyte specific transcript 1, the LY117 gene for lymphocyte antigen 117, the AIF1 gene for alograft imflammatory factor 1, the BAT2 gene for HLA-B associated transcript 2, the 3' end of the BAT3 gene for HLA-B associated transcript 3 and two CpG islands, complete sequence Length = 135784 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtggaagtggcagcggc 224 |||||||||||||||||||| ||||| ||||| Sbjct: 107339 gggagaggtggtggcggtggcggtggcggcggc 107371
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 177 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 216 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 18225304 gggagcagcggcggttggtagagatggtggcggtggaagtg 18225264
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 177 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 216 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 28128635 gggagcagcggcggttggtagagatggtggcggtggaagtg 28128675
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtgcccgaccgacgcgctgaagctg 527 |||||||| |||||||||||||||| Sbjct: 3455297 gtgcccgatcgacgcgctgaagctg 3455273
>ref|XM_341709.2| PREDICTED: Rattus norvegicus core-binding factor, runt domain, alpha subunit 2; translocated to, 3 (predicted) (Cbfa2t3_predicted), mRNA Length = 4723 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 tcggcttcatgtggcctcttccttg 102 |||||||| |||||||||||||||| Sbjct: 632 tcggcttcctgtggcctcttccttg 608
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtgcccgaccgacgcgctgaagctg 527 |||||||| |||||||||||||||| Sbjct: 72001 gtgcccgatcgacgcgctgaagctg 71977
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtgcccgaccgacgcgctgaagctg 527 |||||||| |||||||||||||||| Sbjct: 146851 gtgcccgatcgacgcgctgaagctg 146827
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 42.1 bits (21), Expect = 1.8 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 177 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 216 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 74028 gggagcagcggcggttggtagagatggtggcggtggaagtg 73988
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 42.1 bits (21), Expect = 1.8 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 177 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 216 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 126130 gggagcagcggcggttggtagagatggtggcggtggaagtg 126170
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 42.1 bits (21), Expect = 1.8 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 177 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 216 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 12108 gggagcagcggcggttggtagagatggtggcggtggaagtg 12148
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full insert sequence Length = 1013 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtgcccgaccgacgcgctgaagctg 527 |||||||| |||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full insert sequence Length = 992 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtgcccgaccgacgcgctgaagctg 527 |||||||| |||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full insert sequence Length = 1384 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtgcccgaccgacgcgctgaagctg 527 |||||||| |||||||||||||||| Sbjct: 925 gtgcccgatcgacgcgctgaagctg 949
>emb|AL663053.12| Mouse DNA sequence from clone RP23-436M12 on chromosome 11, complete sequence Length = 203593 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 gaggtggtggcggtggaagtggcag 220 |||||||||||||||| |||||||| Sbjct: 137973 gaggtggtggcggtggcagtggcag 137949
>gb|BC072529.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein U, mRNA (cDNA clone MGC:91534 IMAGE:7096906), complete cds Length = 3380 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 ||||||||||||||| |||||||| Sbjct: 2303 gagaggtggtggcggcggaagtgg 2326
>ref|NM_114874.2| Arabidopsis thaliana unknown protein AT3G50140 mRNA, complete cds Length = 1529 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ggtggtggcggtggaagtgg 217 |||||||||||||||||||| Sbjct: 91 ggtggtggcggtggaagtgg 72
>gb|BC103753.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (cDNA clone MGC:117312 IMAGE:6182358), complete cds Length = 1614 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1043 ggcggtggcagtggtggtggcggtggcggtggcagc 1078
>ref|XM_514591.1| PREDICTED: Pan troglodytes similar to autoantigen p542 (LOC458187), mRNA Length = 1127 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 571 ggcggtggcagtggtggtggcggtggcggtggcagc 606
>ref|XM_471620.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcggtggaagtggcagcggc 224 |||||||||||||||||||| Sbjct: 41 gcggtggaagtggcagcggc 60
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 tgcccgaccgacgcgctgaagctg 527 ||||||| |||||||||||||||| Sbjct: 193 tgcccgatcgacgcgctgaagctg 216
>ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.17), mRNA Length = 489 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 500 caagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 186 caagtgcccgttcgacgcgctgaagctg 213
>ref|NM_057139.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein U (Hnrpu), mRNA Length = 3563 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 ||||||||||||||| |||||||| Sbjct: 2782 gagaggtggtggcggcggaagtgg 2805
>gb|AC100726.7| Mus musculus chromosome 19, clone RP24-245B11, complete sequence Length = 176074 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 acaatggtggccacgggagcagag 186 |||||||||||||| ||||||||| Sbjct: 22683 acaatggtggccactggagcagag 22660
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 atggcgtccaaggtgtcggc 82 |||||||||||||||||||| Sbjct: 2734437 atggcgtccaaggtgtcggc 2734418
>ref|XM_459901.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E14256g) partial mRNA Length = 1986 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cctcttgtttgcagtgacca 132 |||||||||||||||||||| Sbjct: 531 cctcttgtttgcagtgacca 512
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 cgaccgacgcgctgaagctg 527 |||||||||||||||||||| Sbjct: 1197388 cgaccgacgcgctgaagctg 1197369
>ref|XM_709236.1| Candida albicans SC5314 putative calcineurin regulatory protein (CaO19.123), mRNA Length = 633 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggtggcggtggaagtgg 217 |||||||||||||||||||| Sbjct: 238 ggtggtggcggtggaagtgg 257
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcctcttccttgcccttaac 110 |||||||||||||||||||| Sbjct: 101301 gcctcttccttgcccttaac 101320
>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence Length = 160892 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 acaatggtggccacgggagcagag 186 |||||||||||||| ||||||||| Sbjct: 46746 acaatggtggccactggagcagag 46769
>ref|NM_207671.2| Mus musculus zinc finger protein 318 (Zfp318), transcript variant 1, mRNA Length = 6297 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gaggtggtggcggtggaagt 215 |||||||||||||||||||| Sbjct: 3905 gaggtggtggcggtggaagt 3886
>ref|XM_845999.1| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1), transcript variant 2 (LOC489729), mRNA Length = 11346 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 gaggcggtgggagaggtggtggcggtgg 211 |||| |||||| |||||||||||||||| Sbjct: 6166 gaggtggtgggggaggtggtggcggtgg 6139
>ref|XM_546849.2| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1), transcript variant 1 (LOC489729), mRNA Length = 11373 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 gaggcggtgggagaggtggtggcggtgg 211 |||| |||||| |||||||||||||||| Sbjct: 6193 gaggtggtgggggaggtggtggcggtgg 6166
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gaggtggtggcggtggaagt 215 |||||||||||||||||||| Sbjct: 99411 gaggtggtggcggtggaagt 99430
>gb|BC088727.1| Homo sapiens cDNA clone IMAGE:6285074, **** WARNING: chimeric clone **** Length = 6776 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 6160 ggcggtggcagtggtggtggcggtggcggtggcagc 6195
>gb|AC163276.4| Mus musculus chromosome 19, clone RP24-316F20, complete sequence Length = 169300 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcctcttccttgcccttaac 110 |||||||||||||||||||| Sbjct: 154736 gcctcttccttgcccttaac 154717
>ref|NM_016732.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 1, mRNA Length = 1589 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1019 ggcggtggcagtggtggtggcggtggcggtggcagc 1054
>ref|NM_007367.2| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 2, mRNA Length = 1541 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 971 ggcggtggcagtggtggtggcggtggcggtggcagc 1006
>emb|AL031668.23|HS64K7 Human DNA sequence from clone RP1-64K7 on chromosome 20q11.21-11.23 Contains the EIF2S2 gene for eukaryotic translation initiation factor 2 subunit 2 (beta, 38kD), a novel gene, the 5' end of a novel gene, the 3' end of the RALY gene for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow), the RPS2P1 gene for ribosomal protein S2 pseudogene 1 and two CpG islands, complete sequence Length = 139378 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 60876 ggcggtggcagtggtggtggcggtggcggtggcagc 60911
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cctcttgtttgcagtgacca 132 |||||||||||||||||||| Sbjct: 1075849 cctcttgtttgcagtgacca 1075830
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 cgaccgacgcgctgaagctg 527 |||||||||||||||||||| Sbjct: 2513325 cgaccgacgcgctgaagctg 2513306
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 atggcgtccaaggtgtcggc 82 |||||||||||||||||||| Sbjct: 194750 atggcgtccaaggtgtcggc 194731
>emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chromosome 6, complete sequence Length = 83849 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 9369 gggagaggtggtggcggtgg 9388
>emb|AL662962.3|OSJN00165 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029L02, complete sequence Length = 165786 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcggtggaagtggcagcggc 224 |||||||||||||||||||| Sbjct: 43235 gcggtggaagtggcagcggc 43254
>emb|AL132978.1|ATF3A4 Arabidopsis thaliana DNA chromosome 3, BAC clone F3A4 Length = 108158 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ggtggtggcggtggaagtgg 217 |||||||||||||||||||| Sbjct: 91792 ggtggtggcggtggaagtgg 91811
>gb|BC065633.1| Danio rerio zgc:77262, mRNA (cDNA clone MGC:77262 IMAGE:6964048), complete cds Length = 2540 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 ggcggtgggagaggtggtggcggtggaa 213 |||||||||||||| || |||||||||| Sbjct: 752 ggcggtgggagaggaggaggcggtggaa 725
>gb|AC079906.15| Homo sapiens 12q BAC RP11-618L22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180688 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cttcatgtggcctcttcctt 101 |||||||||||||||||||| Sbjct: 154453 cttcatgtggcctcttcctt 154434
>emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chromosome 6, complete sequence Length = 101422 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 77784 gggagaggtggtggcggtgg 77803
>dbj|AB017437.1| Gallus gallus mRNA for avena, complete cds Length = 2265 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 1251 gggagaggtggtggcggtgg 1232
>emb|BX530031.5| Zebrafish DNA sequence from clone DKEY-175M17 in linkage group 21, complete sequence Length = 160736 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaa 213 |||||||||||||| || |||||||||| Sbjct: 12258 ggcggtgggagaggaggaggcggtggaa 12285
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 40.1 bits (20), Expect = 7.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 181 gcagaggcggtgggagaggtggtggcggtggaagtggcagcggc 224 |||||||| |||| ||||| ||||| |||| |||||||||||| Sbjct: 4805 gcagaggcagtggcagaggcagtggcagtggcagtggcagcggc 4848
>emb|CR626560.1| full-length cDNA clone CS0DG001YC07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 733 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 177 ggcggtggcagtggtggtggcggtggcggtggcagc 212
>emb|CR626461.1| full-length cDNA clone CS0DC024YD16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 951 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 395 ggcggtggcagtggtggtggcggtggcggtggcagc 430
>emb|CR625534.1| full-length cDNA clone CS0DF038YF22 of Fetal brain of Homo sapiens (human) Length = 1706 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1201 ggcggtggcagtggtggtggcggtggcggtggcagc 1236
>emb|CR623780.1| full-length cDNA clone CS0DC003YF16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1434 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1021 ggcggtggcagtggtggtggcggtggcggtggcagc 1056
>emb|CR622300.1| full-length cDNA clone CS0DC003YJ22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1433 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1021 ggcggtggcagtggtggtggcggtggcggtggcagc 1056
>emb|CR620280.1| full-length cDNA clone CS0DL002YO08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1020 ggcggtggcagtggtggtggcggtggcggtggcagc 1055
>emb|CR617105.1| full-length cDNA clone CS0DI075YL22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 974 ggcggtggcagtggtggtggcggtggcggtggcagc 1009
>emb|CR615528.1| full-length cDNA clone CS0DI063YA17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1516 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 985 ggcggtggcagtggtggtggcggtggcggtggcagc 1020
>emb|CR615132.1| full-length cDNA clone CS0DI081YO16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1553 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1022 ggcggtggcagtggtggtggcggtggcggtggcagc 1057
>emb|CR614904.1| full-length cDNA clone CS0DF007YF13 of Fetal brain of Homo sapiens (human) Length = 1574 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1048 ggcggtggcagtggtggtggcggtggcggtggcagc 1083
>emb|CR613686.1| full-length cDNA clone CS0DK010YB22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1667 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1159 ggcggtggcagtggtggtggcggtggcggtggcagc 1194
>emb|CR613485.1| full-length cDNA clone CS0DK005YP23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1791 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1266 ggcggtggcagtggtggtggcggtggcggtggcagc 1301
>emb|CR609461.1| full-length cDNA clone CS0DK006YE09 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1713 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1207 ggcggtggcagtggtggtggcggtggcggtggcagc 1242
>emb|CR612346.1| full-length cDNA clone CS0DA008YF04 of Neuroblastoma of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1168 ggcggtggcagtggtggtggcggtggcggtggcagc 1203
>emb|CR611602.1| full-length cDNA clone CS0DC018YL07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1341 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 814 ggcggtggcagtggtggtggcggtggcggtggcagc 849
>emb|CR606402.1| full-length cDNA clone CS0DI064YN17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 975 ggcggtggcagtggtggtggcggtggcggtggcagc 1010
>gb|AC009373.7| Drosophila melanogaster 3L BAC RP98-22B18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167630 Score = 40.1 bits (20), Expect = 7.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 181 gcagaggcggtgggagaggtggtggcggtggaagtggcagcggc 224 |||||||| |||| ||||| ||||| |||| |||||||||||| Sbjct: 151687 gcagaggcagtggcagaggcagtggcagtggcagtggcagcggc 151730
>emb|CR604151.1| full-length cDNA clone CS0DI007YH05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1744 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1238 ggcggtggcagtggtggtggcggtggcggtggcagc 1273
>emb|CR603257.1| full-length cDNA clone CS0DB001YP12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1170 ggcggtggcagtggtggtggcggtggcggtggcagc 1205
>emb|CR600862.1| full-length cDNA clone CS0DI064YP08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1479 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 982 ggcggtggcagtggtggtggcggtggcggtggcagc 1017
>emb|CR599587.1| full-length cDNA clone CS0DI033YM20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1495 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 973 ggcggtggcagtggtggtggcggtggcggtggcagc 1008
>emb|CR599150.1| full-length cDNA clone CS0DA010YJ20 of Neuroblastoma of Homo sapiens (human) Length = 1769 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1232 ggcggtggcagtggtggtggcggtggcggtggcagc 1267
>emb|CR597090.1| full-length cDNA clone CS0DK010YO17 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1548 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1022 ggcggtggcagtggtggtggcggtggcggtggcagc 1057
>emb|CR596751.1| full-length cDNA clone CS0DC028YL10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1081 ggcggtggcagtggtggtggcggtggcggtggcagc 1116
>emb|CR596021.1| full-length cDNA clone CS0DI057YH17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1533 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 992 ggcggtggcagtggtggtggcggtggcggtggcagc 1027
>emb|CR595464.1| full-length cDNA clone CS0DM001YD17 of Fetal liver of Homo sapiens (human) Length = 1577 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1068 ggcggtggcagtggtggtggcggtggcggtggcagc 1103
>ref|NM_166695.1| Drosophila melanogaster CG32836-RA (CG32836), mRNA Length = 1148 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 agaggtggtggcggtggaag 214 |||||||||||||||||||| Sbjct: 658 agaggtggtggcggtggaag 639
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 500 caagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 68894 caagtgcccgttcgacgcgctgaagctg 68921 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 tgcccgaccgacgcgctgaagctg 527 ||||||| |||||||||||||||| Sbjct: 66285 tgcccgatcgacgcgctgaagctg 66308
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 cgaccgacgcgctgaagctg 527 |||||||||||||||||||| Sbjct: 249609 cgaccgacgcgctgaagctg 249628
>gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex BAC MMU218K02, complete sequence Length = 182826 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 55948 gggagaggtggtggcggtgg 55967
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcggtggaagtggcagcggc 224 |||||||||||||||||||| Sbjct: 12749016 gcggtggaagtggcagcggc 12749035
>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone BACR08I14, complete sequence Length = 190616 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 agaggtggtggcggtggaag 214 |||||||||||||||||||| Sbjct: 48172 agaggtggtggcggtggaag 48153
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 22123 gggagaggtggtggcggtgg 22104
>dbj|AK222915.1| Homo sapiens mRNA for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow) long isoform variant, clone: HRC04171 Length = 1553 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 982 ggcggtggcagtggtggtggcggtggcggtggcagc 1017
>ref|NM_204300.1| Gallus gallus enabled homolog (Drosophila) (ENAH), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 1727 gggagaggtggtggcggtgg 1708
>gb|AF227194.1| Mus musculus zinc finger protein TZF-L mRNA, complete cds Length = 6297 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gaggtggtggcggtggaagt 215 |||||||||||||||||||| Sbjct: 3905 gaggtggtggcggtggaagt 3886
>gb|AC012066.10| Homo sapiens BAC clone RP11-173H9 from 2, complete sequence Length = 188547 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ggtggtggcggtggaagtggcagc 221 |||||||||||||| ||||||||| Sbjct: 95294 ggtggtggcggtggcagtggcagc 95317
>ref|XM_579596.1| PREDICTED: Rattus norvegicus heterogeneous nuclear ribonucleoprotein U (Hnrpu), mRNA Length = 3064 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 ||||||||||||||| |||||||| Sbjct: 2281 gagaggtggtggcggcggaagtgg 2304
>ref|NM_205654.1| Danio rerio zgc:77262 (zgc:77262), mRNA Length = 2540 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 ggcggtgggagaggtggtggcggtggaa 213 |||||||||||||| || |||||||||| Sbjct: 752 ggcggtgggagaggaggaggcggtggaa 725
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 323123 gggagaggtggtggcggtgg 323104
>dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A09, full insert sequence Length = 764 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 500 caagtgcccgaccgacgcgctgaagctg 527 |||||||||| |||||||||||||||| Sbjct: 265 caagtgcccgttcgacgcgctgaagctg 292
>gb|BC105018.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (cDNA clone MGC:132678 IMAGE:8144021), complete cds Length = 1206 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 888 ggcggtggcagtggtggtggcggtggcggtggcagc 923
>gb|AF148457.1|AF148457 Homo sapiens heterogeneous nuclear ribonucleoprotein, alternate transcript (RALY) mRNA, complete cds Length = 1589 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 1019 ggcggtggcagtggtggtggcggtggcggtggcagc 1054
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 40.1 bits (20), Expect = 7.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 181 gcagaggcggtgggagaggtggtggcggtggaagtggcagcggc 224 |||||||| |||| ||||| ||||| |||| |||||||||||| Sbjct: 408890 gcagaggcagtggcagaggcagtggcagtggcagtggcagcggc 408933
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 agaggtggtggcggtggaag 214 |||||||||||||||||||| Sbjct: 200476 agaggtggtggcggtggaag 200457
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence Length = 174415 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cttgcccttaacctcctctt 118 |||||||||||||||||||| Sbjct: 131415 cttgcccttaacctcctctt 131396
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 ggtggcggtggaagtggcagcggc 224 |||||||||||||||||| ||||| Sbjct: 1367635 ggtggcggtggaagtggcggcggc 1367658
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 gcagaggcggtgggagaggtggtggcgg 208 ||||||||||||| ||||||||||||| Sbjct: 132889 gcagaggcggtggcggaggtggtggcgg 132916
>gb|L38696.1|HUMAUAG Homo sapiens autoantigen p542 mRNA, complete cds Length = 1422 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 ggcggtgggagaggtggtggcggtggaagtggcagc 221 |||||||| || |||||||||||||| |||||||| Sbjct: 852 ggcggtggcagtggtggtggcggtggcggtggcagc 887
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 tgcccgaccgacgcgctgaagctg 527 ||||||| |||||||||||||||| Sbjct: 1849 tgcccgatcgacgcgctgaagctg 1872
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 tgcccgaccgacgcgctgaagctg 527 ||||||| |||||||||||||||| Sbjct: 237 tgcccgatcgacgcgctgaagctg 260
>emb|AL513352.12| Mouse DNA sequence from clone RP23-180L12 on chromosome 15, complete sequence Length = 240977 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 aggtggtggcggtggaagtggcagcggc 224 |||||||||| |||| |||||||||||| Sbjct: 224686 aggtggtggcagtggcagtggcagcggc 224713
>dbj|AB057641.1| Gallus gallus mRNA for avEna neural variant, complete cds Length = 3297 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 1727 gggagaggtggtggcggtgg 1708
>dbj|AB035523.1| Gallus gallus mRNA for avenaIII, complete cds Length = 1853 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 785 gggagaggtggtggcggtgg 766
>dbj|AB035522.1| Gallus gallus mRNA for avenaII, complete cds Length = 2135 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gggagaggtggtggcggtgg 211 |||||||||||||||||||| Sbjct: 1140 gggagaggtggtggcggtgg 1121
>dbj|D14048.1|RATSP120 Rattus norvegicus mRNA for SP120, complete cds Length = 3563 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gagaggtggtggcggtggaagtgg 217 ||||||||||||||| |||||||| Sbjct: 2782 gagaggtggtggcggcggaagtgg 2805 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,247,920 Number of Sequences: 3902068 Number of extensions: 2247920 Number of successful extensions: 54969 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 54284 Number of HSP's gapped (non-prelim): 690 length of query: 527 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 504 effective length of database: 17,143,297,704 effective search space: 8640222042816 effective search space used: 8640222042816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
