ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart34b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DCD_NEIMB (P63904) Deoxycytidine triphosphate deaminase (EC 3.5.... 29 4.3
2DCD_NEIMA (P63903) Deoxycytidine triphosphate deaminase (EC 3.5.... 29 4.3
3FA10_RABIT (O19045) Coagulation factor X precursor (EC 3.4.21.6)... 28 7.3

>DCD_NEIMB (P63904) Deoxycytidine triphosphate deaminase (EC 3.5.4.13) (dCTP|
           deaminase)
          Length = 188

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 103 QRRPEPFGLVDVREPGKIDEGDGLRKVVGG 14
           +R  E FG++D  EP +I E DG R +  G
Sbjct: 10  RRMSEEFGMIDPFEPNQIKEADGKRIISYG 39



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>DCD_NEIMA (P63903) Deoxycytidine triphosphate deaminase (EC 3.5.4.13) (dCTP|
           deaminase)
          Length = 188

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 103 QRRPEPFGLVDVREPGKIDEGDGLRKVVGG 14
           +R  E FG++D  EP +I E DG R +  G
Sbjct: 10  RRMSEEFGMIDPFEPNQIKEADGKRIISYG 39



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>FA10_RABIT (O19045) Coagulation factor X precursor (EC 3.4.21.6) (Stuart|
           factor) [Contains: Factor X light chain; Factor X heavy
           chain; Activated factor Xa heavy chain]
          Length = 490

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 88  PFGLVDVREPGKIDEGDGLRKVVGGQ 11
           PF L+D  EP   D+   L ++VGGQ
Sbjct: 212 PFNLLDSPEPPPEDDSSSLVRIVGGQ 237


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,105,425
Number of Sequences: 219361
Number of extensions: 120540
Number of successful extensions: 416
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 80,573,946
effective HSP length: 9
effective length of database: 78,599,697
effective search space used: 1886392728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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