ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart34b07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC121481.6| Rattus norvegicus NOVECTOR CH230-218J9 (Children's Hospital Oakland Research Institute) complete sequence Length = 236244 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatcca 56 |||||||||||||||||||||| Sbjct: 138981 cgtccgtccacccatccatcca 138960
>emb|CR956374.5| Pig DNA sequence from clone CH242-153C17 on chromosome 17, complete sequence Length = 118034 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatcca 56 |||||||||||||||||||||| Sbjct: 48938 cgtccgtccacccatccatcca 48959
>emb|BX649598.17| Zebrafish DNA sequence from clone CH211-214P12 in linkage group 18, complete sequence Length = 213741 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatcca 56 |||||||||||||||||||||| Sbjct: 126103 cgtccgtccacccatccatcca 126124
>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence Length = 283185 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatcca 56 |||||||||||||||||||||| Sbjct: 128396 cgtccgtccacccatccatcca 128375
>emb|BX649298.7| Zebrafish DNA sequence from clone DKEY-12H2 in linkage group 20, complete sequence Length = 122662 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatcca 56 |||||||||||||||||||||| Sbjct: 37334 cgtccgtccacccatccatcca 37313
>emb|BX470162.9| Zebrafish DNA sequence from clone CH211-216L23 in linkage group 18, complete sequence Length = 215723 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatcca 56 |||||||||||||||||||||| Sbjct: 163781 cgtccgtccacccatccatcca 163802
>emb|CR376776.19| Zebrafish DNA sequence from clone CH211-13I23, complete sequence Length = 179675 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatcca 56 |||||||||||||||||||||| Sbjct: 20506 cgtccgtccacccatccatcca 20485
>ref|XM_470646.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 615 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 265 tcgccgtcgtcatcacctcgg 245
>ref|XM_507433.1| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.1-1 mRNA Length = 1168 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 actttgcgtgcgaggcgaggc 148 ||||||||||||||||||||| Sbjct: 75 actttgcgtgcgaggcgaggc 95
>ref|XM_506699.2| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.1-1 mRNA Length = 1193 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 actttgcgtgcgaggcgaggc 148 ||||||||||||||||||||| Sbjct: 86 actttgcgtgcgaggcgaggc 106
>gb|AC113438.17| Mus musculus chromosome 6, clone RP23-191I2, complete sequence Length = 221969 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 212919 gtccgtccacccatccatcca 212899
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 7268050 tcgccgtcgtcatcacctcgg 7268070
>emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 in linkage group 11, complete sequence Length = 204337 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 86570 gtccgtccacccatccatcca 86590
>gb|AC119673.3| Homo sapiens chromosome 1 clone RP11-212H11, complete sequence Length = 187660 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 60643 gtccgtccacccatccatcca 60663
>emb|CR936470.3| Human DNA sequence from clone XX-C455C658L on chromosome 22, complete sequence Length = 7143 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 6016 gtccgtccacccatccatcca 6036
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 51309 tcgccgtcgtcatcacctcgg 51329
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 156212 tcgccgtcgtcatcacctcgg 156232
>emb|AL645566.15| Mouse DNA sequence from clone RP23-398M13 on chromosome 11 Contains a CpG island, complete sequence Length = 192808 Score = 42.1 bits (21), Expect = 0.54 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 ggagaaggcgaaaaacagaaggagaaaaa 92 |||||||| |||||| ||||||||||||| Sbjct: 24208 ggagaaggagaaaaaaagaaggagaaaaa 24236
>gb|AF187000.4| Homo sapiens chromosome 8 clone RP1-316L14 map 8q24.2, complete sequence Length = 129679 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gaaaaacagaaggagaaaaat 93 ||||||||||||||||||||| Sbjct: 4353 gaaaaacagaaggagaaaaat 4373
>gb|AC104608.7| Drosophila melanogaster X BAC RP98-35A18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174893 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatcc 55 ||||||||||||||||||||| Sbjct: 96920 cgtccgtccacccatccatcc 96900
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 19306 tcgccgtcgtcatcacctcgg 19326
>gb|AC100872.2| Homo sapiens chromosome 8, clone RP11-973F15, complete sequence Length = 195563 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gaaaaacagaaggagaaaaat 93 ||||||||||||||||||||| Sbjct: 10502 gaaaaacagaaggagaaaaat 10522
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 22714112 tcgccgtcgtcatcacctcgg 22714132
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 5320339 tcgccgtcgtcatcacctcgg 5320319 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 gccgtcgtcatcacctcgg 25 ||||||||||||||||||| Sbjct: 7046213 gccgtcgtcatcacctcgg 7046195
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 29032420 tcgccgtcgtcatcacctcgg 29032440 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 cgtcgccgtcgtcatcacc 21 ||||||||||||||||||| Sbjct: 13256821 cgtcgccgtcgtcatcacc 13256803
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 7265945 tcgccgtcgtcatcacctcgg 7265965
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 actttgcgtgcgaggcgaggc 148 ||||||||||||||||||||| Sbjct: 1327006 actttgcgtgcgaggcgaggc 1327026
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 94803 tcgccgtcgtcatcacctcgg 94823
>dbj|AB025926.3| Oryza sativa BI-1 mRNA for Bax inhibitor-1, complete cds Length = 1181 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 actttgcgtgcgaggcgaggc 148 ||||||||||||||||||||| Sbjct: 61 actttgcgtgcgaggcgaggc 81
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 actttgcgtgcgaggcgaggc 148 ||||||||||||||||||||| Sbjct: 8278 actttgcgtgcgaggcgaggc 8298
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 47407 tcgccgtcgtcatcacctcgg 47427
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 54703 tcgccgtcgtcatcacctcgg 54683
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tcgccgtcgtcatcacctcgg 25 ||||||||||||||||||||| Sbjct: 119102 tcgccgtcgtcatcacctcgg 119082
>emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on chromosome 4, complete sequence Length = 202551 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 10920 gtccgtccacccatccatcca 10900 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 10643 gtccgtccacccatccatcca 10623
>dbj|AK101060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022C21, full insert sequence Length = 1193 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 actttgcgtgcgaggcgaggc 148 ||||||||||||||||||||| Sbjct: 86 actttgcgtgcgaggcgaggc 106
>dbj|AK061953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F03, full insert sequence Length = 1168 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 actttgcgtgcgaggcgaggc 148 ||||||||||||||||||||| Sbjct: 75 actttgcgtgcgaggcgaggc 95
>gb|AC153432.9| Mus musculus 6 BAC RP23-110F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 189225 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 137812 gtccgtccacccatccatcca 137832
>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete sequence Length = 285949 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatcc 55 ||||||||||||||||||||| Sbjct: 27714 cgtccgtccacccatccatcc 27734
>gb|AC132834.4| Homo sapiens chromosome 8, clone CTD-2344M9, complete sequence Length = 156318 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 50336 gtccgtccacccatccatcca 50356
>emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chromosome 4, complete sequence Length = 188425 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gtccgtccacccatccatcca 56 ||||||||||||||||||||| Sbjct: 147479 gtccgtccacccatccatcca 147459 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatc 54 |||||||||||||||||||| Sbjct: 134406 cgtccgtccacccatccatc 134387
>gb|AY559433.1| Thielaviopsis basicola clone NG3/NG4 ISSR sequence Length = 439 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 cacgtccgtccacccatccatcca 56 ||||||| |||||||||||||||| Sbjct: 115 cacgtccatccacccatccatcca 138
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatccaaa 58 |||||||||| ||||||||||||| Sbjct: 14255 cgtccgtccatccatccatccaaa 14278
>gb|AC153147.7| Mus musculus BAC clone RP23-205D14 from chromosome 12, complete sequence Length = 206281 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gaaaaacagaaggagaaaaa 92 |||||||||||||||||||| Sbjct: 167193 gaaaaacagaaggagaaaaa 167174
>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence Length = 199827 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 114451 tccgtccacccatccatcca 114470
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatccaaa 58 |||||||||| ||||||||||||| Sbjct: 114240 cgtccgtccatccatccatccaaa 114263
>gb|AF048728.1| Homo sapiens minisatellite ms31 repeat region Length = 26857 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 4226 tccgtccacccatccatcca 4245
>gb|AC150658.7| Mus musculus BAC clone RP24-474E20 from chromosome y, complete sequence Length = 204836 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 agaaggcgaaaaacagaaggagaaaaat 93 |||||| |||||| |||||||||||||| Sbjct: 138137 agaaggagaaaaagagaaggagaaaaat 138110
>gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, complete sequence Length = 178426 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 25238 tccgtccacccatccatcca 25219
>gb|AC016158.4| Drosophila melanogaster clone BACR38H07, complete sequence Length = 172841 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gtccgtccacccatccatcc 55 |||||||||||||||||||| Sbjct: 119125 gtccgtccacccatccatcc 119106
>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence Length = 176549 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 43530 tccgtccacccatccatcca 43511
>gb|AC145570.3| Mus musculus BAC clone RP24-95K23 from chromosome Y, complete sequence Length = 168764 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 agaaggcgaaaaacagaaggagaaaaat 93 |||||| |||||| |||||||||||||| Sbjct: 94586 agaaggagaaaaagagaaggagaaaaat 94559
>gb|AC166992.2| Mus musculus BAC clone RP24-144F18 from chromosome 9, complete sequence Length = 193799 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 10715 tccgtccacccatccatcca 10734
>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence Length = 203708 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 41648 tccgtccacccatccatcca 41629
>gb|AC138611.4| Mus musculus BAC clone RP23-41P19 from chromosome 18, complete sequence Length = 246348 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 111244 tccgtccacccatccatcca 111225
>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence Length = 179362 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 178061 tccgtccacccatccatcca 178042
>gb|AC007030.3| Homo sapiens PAC clone RP5-1112I4 from 7, complete sequence Length = 117853 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 90227 tccgtccacccatccatcca 90246 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 90163 tccgtccacccatccatcca 90182
>gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, complete sequence Length = 168350 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatc 54 |||||||||||||||||||| Sbjct: 149441 cgtccgtccacccatccatc 149460
>emb|AL445199.37| Human DNA sequence from clone RP13-439H18 on chromosome 10 Contains the GPR123 gene for G protein-coupled receptor 123, a novel gene (containing KIAA1768, FLJ00378 and FLJ00252), gene FLJ25027, the UTF1 gene for undifferentiated embryonic cell transcription factor 1, the 5' end of the VENTX2 gene for VENT-like homeobox2, a novel gene, a 60S ribosomal protein L5 (RPL5) pseudogene and twenty five CpG islands, complete sequence Length = 212199 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 145408 tccgtccacccatccatcca 145389
>emb|Z83846.1|HS415G2 Human DNA sequence from clone CTA-415G2 on chromosome 22 Contains the 5' end of the SYN3 gene for Synapsin III, a novel pseudogene and a CpG island, complete sequence Length = 129957 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtccacccatccatccaa 57 |||||||||||||||||||| Sbjct: 18751 ccgtccacccatccatccaa 18770
>emb|CR381602.30| Zebrafish DNA sequence from clone DKEY-183M22 in linkage group 6, complete sequence Length = 192136 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 107536 tccgtccacccatccatcca 107555
>emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chromosome 6 Contains part of the LAMA2 gene for laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM), complete sequence Length = 91827 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 46318 tccgtccacccatccatcca 46337
>gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence Length = 157615 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 44853 tccgtccacccatccatcca 44834
>emb|AL121782.9|HSJ585I14 Human DNA sequence from clone RP4-585I14 on chromosome 20 Contains the 3' end of the C20orf13 gene for chromosome 20 open reading frame 13 and the GAPDP2 gene for glyceraldehyde-3-phosphate dehydrogenase pseudogene 2, complete sequence Length = 144781 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gaaaaacagaaggagaaaaa 92 |||||||||||||||||||| Sbjct: 7347 gaaaaacagaaggagaaaaa 7328
>gb|AC010538.9| Homo sapiens chromosome 16 clone RP11-368I7, complete sequence Length = 210031 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 143559 tccgtccacccatccatcca 143540
>gb|AC175315.3| Mus musculus chromosome 1, clone wi1-1003N17, complete sequence Length = 44846 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatccaaa 58 |||||||||| ||||||||||||| Sbjct: 37485 cgtccgtccatccatccatccaaa 37462
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cgccgtcgtcatcacctcgg 25 |||||||||||||||||||| Sbjct: 250307 cgccgtcgtcatcacctcgg 250288
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cgccgtcgtcatcacctcgg 25 |||||||||||||||||||| Sbjct: 298466 cgccgtcgtcatcacctcgg 298447
>emb|BX510998.12| Zebrafish DNA sequence from clone CH211-272L18 in linkage group 12, complete sequence Length = 148753 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 15145 tccgtccacccatccatcca 15164
>emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 map 22q22.3, complete sequence Length = 180777 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 133928 tccgtccacccatccatcca 133947
>gb|AC019288.8| Homo sapiens chromosome 15, clone RP11-139F4, complete sequence Length = 138517 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 17411 tccgtccacccatccatcca 17430
>emb|BX530409.7| Zebrafish DNA sequence from clone DKEY-69K9 in linkage group 15, complete sequence Length = 245494 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatccaaa 58 |||||||||| ||||||||||||| Sbjct: 136794 cgtccgtccatccatccatccaaa 136771
>gb|AC175467.3| Pan troglodytes BAC clone CH251-302C22 from chromosome unknown, complete sequence Length = 186532 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ccgtccacccatccatccaa 57 |||||||||||||||||||| Sbjct: 93203 ccgtccacccatccatccaa 93222
>gb|AC183302.2| Pan troglodytes BAC clone CH251-258O5 from chromosome unknown, complete sequence Length = 211208 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtccacccatccatccaa 57 |||||||||||||||||||| Sbjct: 7307 ccgtccacccatccatccaa 7288
>ref|NM_001014642.1| Drosophila melanogaster munin CG33518-PA (mun) mRNA, complete cds Length = 1539 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gtccgtccacccatccatcc 55 |||||||||||||||||||| Sbjct: 1310 gtccgtccacccatccatcc 1329
>gb|AC106807.2| Homo sapiens chromosome 5 clone RP11-513C4, complete sequence Length = 176040 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aaaaacagaaggagaaaaat 93 |||||||||||||||||||| Sbjct: 74983 aaaaacagaaggagaaaaat 75002
>dbj|AK031324.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030407H20 product:similar to KIAA1518 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 4826 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 4335 tccgtccacccatccatcca 4316
>gb|AC157773.6| Mus musculus chromosome 8, clone RP24-161L20, complete sequence Length = 179186 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 151081 tccgtccacccatccatcca 151062
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 cacgtccgtccacccatccatcca 56 |||||||||||| ||||||||||| Sbjct: 160472 cacgtccgtccatccatccatcca 160495
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatccaaa 58 |||||||||| ||||||||||||| Sbjct: 6066686 cgtccgtccatccatccatccaaa 6066709
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tcgtcgccgtcgtcatcacctcgg 25 ||||||||||||||||| |||||| Sbjct: 10726515 tcgtcgccgtcgtcatcgcctcgg 10726538 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 cgtcgccgtcgtcatcacc 21 ||||||||||||||||||| Sbjct: 36209667 cgtcgccgtcgtcatcacc 36209649
>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence Length = 199917 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 41969 tccgtccacccatccatcca 41988
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tcgtcgccgtcgtcatcacctcgg 25 ||||||||||||||||| |||||| Sbjct: 49329 tcgtcgccgtcgtcatcgcctcgg 49352
>gb|AC092619.3| Homo sapiens BAC clone RP11-225M4 from 2, complete sequence Length = 163475 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 113204 tccgtccacccatccatcca 113223
>emb|BX649360.12| Zebrafish DNA sequence from clone CH211-194K1 in linkage group 22, complete sequence Length = 60003 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 38512 tccgtccacccatccatcca 38531
>emb|BX908764.11| Zebrafish DNA sequence from clone DKEY-262O11 in linkage group 22, complete sequence Length = 130230 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 24098 tccgtccacccatccatcca 24117
>emb|BX649591.7| Zebrafish DNA sequence from clone CH211-181H6 in linkage group 20, complete sequence Length = 70838 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 28025 tccgtccacccatccatcca 28044
>emb|BX323818.8| Zebrafish DNA sequence from clone DKEY-48H7 in linkage group 4, complete sequence Length = 196712 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 103927 tccgtccacccatccatcca 103908 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 103867 tccgtccacccatccatcca 103848
>gb|AE003730.3| Drosophila melanogaster chromosome 3R, section 68 of 118 of the complete sequence Length = 221402 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gtccgtccacccatccatcc 55 |||||||||||||||||||| Sbjct: 84452 gtccgtccacccatccatcc 84433
>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete sequence Length = 244757 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 cacgtccgtccacccatccatcca 56 |||||||||||| ||||||||||| Sbjct: 101409 cacgtccgtccatccatccatcca 101386
>emb|AL591411.14| Mouse DNA sequence from clone RP23-428M13 on chromosome 2, complete sequence Length = 155889 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 24538 tccgtccacccatccatcca 24519
>emb|AL929516.15| Zebrafish DNA sequence from clone CH211-10C20 in linkage group 1, complete sequence Length = 165892 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 151150 tccgtccacccatccatcca 151169
>gb|AC150659.3| Mus musculus BAC clone RP24-147D24 from Y, complete sequence Length = 145892 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 agaaggcgaaaaacagaaggagaaaaat 93 |||||| |||||| |||||||||||||| Sbjct: 141321 agaaggagaaaaagagaaggagaaaaat 141348
>gb|BC020014.1| Mus musculus EH-domain containing 2, mRNA (cDNA clone IMAGE:3501385), partial cds Length = 1482 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 1445 tccgtccacccatccatcca 1426
>gb|AC132609.3| Mus musculus BAC clone RP23-351O8 from 12, complete sequence Length = 200045 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gaaaaacagaaggagaaaaa 92 |||||||||||||||||||| Sbjct: 21274 gaaaaacagaaggagaaaaa 21255
>gb|BC028803.1| Mus musculus ankyrin repeat domain 25, mRNA (cDNA clone IMAGE:1348126), containing frame-shift errors Length = 603 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 88 tccgtccacccatccatcca 69
>emb|AL928573.14| Zebrafish DNA sequence from clone DKEY-11F5, complete sequence Length = 244471 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 38026 tccgtccacccatccatcca 38007
>emb|AL935047.12| Zebrafish DNA sequence from clone DKEY-20L10, complete sequence Length = 201929 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcca 56 |||||||||||||||||||| Sbjct: 118492 tccgtccacccatccatcca 118511
>dbj|AP003071.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-554A11, complete sequence Length = 191898 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatccaaa 58 |||||||||| ||||||||||||| Sbjct: 125020 cgtccgtccatccatccatccaaa 125043
>gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence from clone y348 Length = 40056 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cgccgtcgtcatcacctcgg 25 |||||||||||||||||||| Sbjct: 15624 cgccgtcgtcatcacctcgg 15605
>emb|AL671011.9| Mouse DNA sequence from clone RP23-95O23 on chromosome 4, complete sequence Length = 226950 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgtccacccatccatccaa 57 |||||||||||||||||||| Sbjct: 217098 ccgtccacccatccatccaa 217079
>gb|AE010445.1| Methanopyrus kandleri AV19 section 144 of 157 of the complete genome Length = 11002 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gtcgccgtcgtcatcacct 22 ||||||||||||||||||| Sbjct: 10413 gtcgccgtcgtcatcacct 10431
>ref|NM_190564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 cgtcgccgtcgtcatcacc 21 ||||||||||||||||||| Sbjct: 1236 cgtcgccgtcgtcatcacc 1254
>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence Length = 238980 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 ccgtccacccatccatcca 56 ||||||||||||||||||| Sbjct: 19420 ccgtccacccatccatcca 19402
>gb|AY660598.1| Atrina rigida clone Asprich_3 unknown mRNA Length = 270 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 atcgtcgccgtcgtcatca 19 ||||||||||||||||||| Sbjct: 251 atcgtcgccgtcgtcatca 233
>gb|AC102232.12| Mus musculus chromosome 18, clone RP24-76F12, complete sequence Length = 232199 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 aaaaacagaaggagaaaaa 92 ||||||||||||||||||| Sbjct: 210966 aaaaacagaaggagaaaaa 210984
>gb|AC150561.4| Bos taurus BAC CH240-184G17 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 227834 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 acagaaggagaaaaatcca 96 ||||||||||||||||||| Sbjct: 5085 acagaaggagaaaaatcca 5103
>gb|AC117784.13| Mus musculus chromosome 15, clone RP24-545F24, complete sequence Length = 190734 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 ccgtccacccatccatcca 56 ||||||||||||||||||| Sbjct: 141433 ccgtccacccatccatcca 141415
>ref|XM_653999.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1487.2), mRNA Length = 3390 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 agaaggcgaaaaacagaag 84 ||||||||||||||||||| Sbjct: 2398 agaaggcgaaaaacagaag 2416
>gb|AY590765.1| Cucumis sativus ferric reductase mRNA, complete cds Length = 2085 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 agaaaaatccaccccaaaa 104 ||||||||||||||||||| Sbjct: 74 agaaaaatccaccccaaaa 56
>gb|AY386696.1| Oryctolagus cuniculus clone 27N5, complete sequence Length = 146676 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 ccgtccacccatccatcca 56 ||||||||||||||||||| Sbjct: 88921 ccgtccacccatccatcca 88903
>gb|AC102547.8| Mus musculus chromosome 7, clone RP23-134L4, complete sequence Length = 220452 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 aaaacagaaggagaaaaat 93 ||||||||||||||||||| Sbjct: 148335 aaaacagaaggagaaaaat 148317
>gb|AC163434.5| Mus musculus chromosome 7, clone RP23-320N24, complete sequence Length = 224337 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 75 aaaacagaaggagaaaaat 93 ||||||||||||||||||| Sbjct: 122652 aaaacagaaggagaaaaat 122670
>gb|AC135188.2| Mus musculus BAC clone RP23-206P4 from chromosome 14, complete sequence Length = 182464 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 aaaaacagaaggagaaaaa 92 ||||||||||||||||||| Sbjct: 20859 aaaaacagaaggagaaaaa 20841
>gb|AC131771.2| Mus musculus BAC clone RP24-297P10 from chromosome 10, complete sequence Length = 145678 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 aaaaacagaaggagaaaaa 92 ||||||||||||||||||| Sbjct: 33279 aaaaacagaaggagaaaaa 33297
>gb|AC122339.3| Mus musculus BAC clone RP23-353L10 from chromosome 5, complete sequence Length = 203685 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 tccgtccacccatccatcc 55 ||||||||||||||||||| Sbjct: 126872 tccgtccacccatccatcc 126854
>gb|AC127273.3| Mus musculus BAC clone RP24-142K18 from chromosome 6, complete sequence Length = 174882 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 75 aaaacagaaggagaaaaat 93 ||||||||||||||||||| Sbjct: 120812 aaaacagaaggagaaaaat 120830
>emb|CR450724.10| Zebrafish DNA sequence from clone DKEY-168I4 in linkage group 18, complete sequence Length = 197565 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 gtccgtccacccatccatc 54 ||||||||||||||||||| Sbjct: 76809 gtccgtccacccatccatc 76827
>emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chromosome 10 Contains part of the gene for a novel protein (LOC221061) and a novel gene, complete sequence Length = 118158 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatccaa 57 |||||||||| |||||||||||| Sbjct: 33362 cgtccgtccatccatccatccaa 33384
>emb|AL603716.2| Human DNA sequence from clone RP11-370B1 on chromosome 13 Contains a novel GrpE protein (possible pseudogene), complete sequence Length = 77708 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 aaaaacagaaggagaaaaa 92 ||||||||||||||||||| Sbjct: 27905 aaaaacagaaggagaaaaa 27887
>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1 and two CpG islands, complete sequence Length = 65922 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 77 aacagaaggagaaaaatccaccc 99 ||||| ||||||||||||||||| Sbjct: 54078 aacagcaggagaaaaatccaccc 54100
>gb|AY300590.1| Zea mays strain Stock6 phytoene synthase 2 (psy2) gene, partial cds Length = 212 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 30 aaacacgtccgtccacccatccatcca 56 |||| |||||||||| ||||||||||| Sbjct: 90 aaacccgtccgtccatccatccatcca 116
>gb|AY300565.1| Zea mays strain SC60 phytoene synthase 2 (psy2) gene, partial cds Length = 212 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 30 aaacacgtccgtccacccatccatcca 56 |||| |||||||||| ||||||||||| Sbjct: 90 aaacccgtccgtccatccatccatcca 116
>gb|AY300559.1| Zea mays strain PI593015 phytoene synthase 2 (psy2) gene, partial cds Length = 215 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 30 aaacacgtccgtccacccatccatcca 56 |||| |||||||||| ||||||||||| Sbjct: 90 aaacccgtccgtccatccatccatcca 116
>gb|AY300544.1| Zea mays strain H60 phytoene synthase 2 (psy2) gene, partial cds Length = 212 Score = 38.2 bits (19), Expect = 8.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 30 aaacacgtccgtccacccatccatcca 56 |||| |||||||||| ||||||||||| Sbjct: 90 aaacccgtccgtccatccatccatcca 116
>emb|AL353607.20| Human DNA sequence from clone RP11-652B19 on chromosome 9 Contains part of the PCSK5 gene for proprotein convertase subtilisin/kexin type 5, complete sequence Length = 141170 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 acagaaggagaaaaatcca 96 ||||||||||||||||||| Sbjct: 107830 acagaaggagaaaaatcca 107812
>emb|AL157906.8| Human DNA sequence from clone RP5-896C23 on chromosome 1p22.3-31.2 Contains GSSs and STSs, complete sequence Length = 115705 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 75 aaaacagaaggagaaaaat 93 ||||||||||||||||||| Sbjct: 101065 aaaacagaaggagaaaaat 101083
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 ggcgaggccgccccgctcc 159 ||||||||||||||||||| Sbjct: 193266 ggcgaggccgccccgctcc 193248
>gb|AC157733.2| Xenopus tropicalis clone ISB1-355J23, complete sequence Length = 82312 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gaaaaacagaaggagaaaa 91 ||||||||||||||||||| Sbjct: 9856 gaaaaacagaaggagaaaa 9838
>gb|AC164970.2| Mus musculus BAC clone RP24-222P1 from chromosome 16, complete sequence Length = 202577 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gaaaaacagaaggagaaaa 91 ||||||||||||||||||| Sbjct: 67419 gaaaaacagaaggagaaaa 67401
>gb|AC008540.6| Homo sapiens chromosome 19 clone CTC-496P20, complete sequence Length = 224931 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 ccgtccacccatccatcca 56 ||||||||||||||||||| Sbjct: 182254 ccgtccacccatccatcca 182236
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 aaaaacagaaggagaaaaa 92 ||||||||||||||||||| Sbjct: 1251069 aaaaacagaaggagaaaaa 1251087
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete sequence Length = 107848 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 aaaacagaaggagaaaaat 93 ||||||||||||||||||| Sbjct: 100558 aaaacagaaggagaaaaat 100540
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 tccgtccacccatccatcc 55 ||||||||||||||||||| Sbjct: 52425 tccgtccacccatccatcc 52443
>gb|AC079173.33| Homo sapiens Xp BAC RP11-323P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165018 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 tccacccatccatccaaag 59 ||||||||||||||||||| Sbjct: 153809 tccacccatccatccaaag 153791
>gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, complete sequence Length = 180614 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 aaaaacagaaggagaaaaa 92 ||||||||||||||||||| Sbjct: 159145 aaaaacagaaggagaaaaa 159127
>emb|BX322620.13| Zebrafish DNA sequence from clone DKEY-49L3 in linkage group 13, complete sequence Length = 192504 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 34 acgtccgtccacccatccatcca 56 ||||||||||| ||||||||||| Sbjct: 94648 acgtccgtccatccatccatcca 94626
>gb|AF106034.3|AF106034 Actinomyces viscosus usher-like protein precursor, type-1 fimbrial major subunit precursor (fimP), sortase-like protein, and prepilin peptidase-like protein genes, complete cds Length = 9439 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 atcgtcgccgtcgtcatca 19 ||||||||||||||||||| Sbjct: 7863 atcgtcgccgtcgtcatca 7881
>gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone rp23-362c8, complete sequence Length = 238658 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 aaaaacagaaggagaaaaatcca 96 ||||||||||||| ||||||||| Sbjct: 58474 aaaaacagaaggaaaaaaatcca 58452
>gb|AC091902.2| Homo sapiens chromosome 5 clone RP11-16L24, complete sequence Length = 188877 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 cgtccacccatccatccaa 57 ||||||||||||||||||| Sbjct: 164350 cgtccacccatccatccaa 164332
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 cgtcgccgtcgtcatcacc 21 ||||||||||||||||||| Sbjct: 86680 cgtcgccgtcgtcatcacc 86662
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 ggcgaggccgccccgctcc 159 ||||||||||||||||||| Sbjct: 163974 ggcgaggccgccccgctcc 163992
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 cgtcgccgtcgtcatcacc 21 ||||||||||||||||||| Sbjct: 18631 cgtcgccgtcgtcatcacc 18613
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 gccgtcgtcatcacctcgg 25 ||||||||||||||||||| Sbjct: 72902 gccgtcgtcatcacctcgg 72884
>dbj|BS000163.1| Pan troglodytes chromosome 22 clone:RP43-010B02, map 22, complete sequences Length = 182740 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatccaa 57 |||||||||| |||||||||||| Sbjct: 96454 cgtccgtccatccatccatccaa 96476
>dbj|BS000158.1| Pan troglodytes chromosome 22 clone:PTB-042G18, map 22, complete sequences Length = 190319 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 35 cgtccgtccacccatccatccaa 57 |||||||||| |||||||||||| Sbjct: 189134 cgtccgtccatccatccatccaa 189156
>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete sequences Length = 160456 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 aaacagaaggagaaaaatccacc 98 ||||||||||||||||| ||||| Sbjct: 20687 aaacagaaggagaaaaacccacc 20709
>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete sequences Length = 174520 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 aaacagaaggagaaaaatccacc 98 ||||||||||||||||| ||||| Sbjct: 112402 aaacagaaggagaaaaacccacc 112424
>dbj|BS000235.1| Pan troglodytes chromosome 22 clone:PTB-013J17, map 22, complete sequences Length = 100580 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 aaacagaaggagaaaaatccacc 98 ||||||||||||||||| ||||| Sbjct: 63088 aaacagaaggagaaaaacccacc 63110
>emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 in linkage group 16, complete sequence Length = 161603 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 cgtccgtccacccatccatccaa 57 |||||||||| |||||||||||| Sbjct: 8493 cgtccgtccatccatccatccaa 8471
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 agaaaaatccaccccaaaacgcg 108 ||||||||||||||||| ||||| Sbjct: 427282 agaaaaatccaccccaagacgcg 427260
>gb|AC124762.4| Mus musculus BAC clone RP23-155A10 from 6, complete sequence Length = 199207 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 aaaacagaaggagaaaaat 93 ||||||||||||||||||| Sbjct: 184000 aaaacagaaggagaaaaat 183982
>gb|AC152415.4| Mus musculus BAC clone RP23-359F16 from 10, complete sequence Length = 195249 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 aaaaacagaaggagaaaaa 92 ||||||||||||||||||| Sbjct: 151566 aaaaacagaaggagaaaaa 151584
>emb|BX247951.11| Zebrafish DNA sequence from clone DKEY-246A16 in linkage group 18, complete sequence Length = 189723 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 36 gtccgtccacccatccatc 54 ||||||||||||||||||| Sbjct: 93699 gtccgtccacccatccatc 93681
>emb|CR855222.6| Zebrafish DNA sequence from clone CH211-265N9 in linkage group 12, complete sequence Length = 140480 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 34 acgtccgtccacccatccatcca 56 ||||||||||| ||||||||||| Sbjct: 140390 acgtccgtccatccatccatcca 140412
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 gaaggagaaaaatccaccc 99 ||||||||||||||||||| Sbjct: 25474 gaaggagaaaaatccaccc 25456
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 cgtcgtcatcacctcggtt 27 ||||||||||||||||||| Sbjct: 783614 cgtcgtcatcacctcggtt 783632
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 aaacagaaggagaaaaatccacc 98 ||||||||||||||||| ||||| Sbjct: 83824 aaacagaaggagaaaaacccacc 83846
>gb|AC079082.39| Mus musculus strain C57BL/6J chromosome 10 clone rp23-161b11, complete sequence Length = 205621 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 aaaaacagaaggagaaaaatcca 96 ||||||||||||| ||||||||| Sbjct: 44078 aaaaacagaaggaaaaaaatcca 44100
>gb|AE000511.1| Helicobacter pylori 26695, complete genome Length = 1667867 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 agaaaaatccaccccaaaacgcg 108 ||||||||||||||||| ||||| Sbjct: 1087271 agaaaaatccaccccaagacgcg 1087293
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 aaagcagcggagaaggcga 74 ||||||||||||||||||| Sbjct: 549757 aaagcagcggagaaggcga 549775
>emb|AJ937763.1| Uncultured bacterium fosmid clone b1dcf5.1.a06 Length = 32219 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 48 atccatccaaagcagcggagaag 70 |||||| |||||||||||||||| Sbjct: 31867 atccatacaaagcagcggagaag 31889
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 gaaggagaaaaatccaccc 99 ||||||||||||||||||| Sbjct: 5584 gaaggagaaaaatccaccc 5602
>emb|AL603682.36| Mouse DNA sequence from clone RP23-235J5 on chromosome 11, complete sequence Length = 211680 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 atcgtcgccgtcgtcatca 19 ||||||||||||||||||| Sbjct: 149764 atcgtcgccgtcgtcatca 149782
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171 region, complete sequence Length = 158063 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 aaacagaaggagaaaaatccacc 98 ||||||||||||||||| ||||| Sbjct: 83824 aaacagaaggagaaaaacccacc 83846 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,555,647 Number of Sequences: 3902068 Number of extensions: 1555647 Number of successful extensions: 137906 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136260 Number of HSP's gapped (non-prelim): 1627 length of query: 172 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 150 effective length of database: 17,147,199,772 effective search space: 2572079965800 effective search space used: 2572079965800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
