ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart34b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 82 9e-16
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 70 4e-12
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 57 5e-08
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 39 0.011
5GLYA_THEVO (Q97CQ5) Serine hydroxymethyltransferase (EC 2.1.2.1)... 33 0.62
6GLYA_THEAC (Q9HI38) Serine hydroxymethyltransferase (EC 2.1.2.1)... 32 1.4
7GLYA_PICTO (Q6L1F6) Serine hydroxymethyltransferase (EC 2.1.2.1)... 30 4.0
8LIPS_MOUSE (P54310) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 30 6.9
9FTSK_XANCP (Q8P993) DNA translocase ftsK 30 6.9
10LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 30 6.9
11PROB_GEOKA (Q5KYA3) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 29 9.0

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
 Frame = +2

Query: 143 FIFGDSLSDVGNNNYLTKSLARAALPWYGIDFGSGMPNGRFCNGRTVADIIGDKMGLPR- 319
           F FGDS+ D GNNN L   L     P YG+DF  G+  GRF NGR  +D I   +G+   
Sbjct: 127 FFFGDSIFDTGNNNNLDTKLKCNYRP-YGMDFPMGVATGRFSNGRVASDYISKYLGVKEI 185

Query: 320 PPAFLDPSVDETVISK-----SGLNYASGGGGILNETSSLFIQRFSLYKQIELFQGTQAF 484
            PA++D  + +    +     +G+++ASGG G L +TS  + +  ++  Q+  FQ  +  
Sbjct: 186 VPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESW-KVTTMLDQLTYFQDYKKR 244

Query: 485 MREKIGQAAADKLFGEAYYVVAMGANDFINT 577
           M++ +G+    K+  +   +V  G+ND I T
Sbjct: 245 MKKLVGKKKTKKIVSKGAAIVVAGSNDLIYT 275



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
 Frame = +2

Query: 143 FIFGDSLSDVGNNNYLTKSLARAALPWYGIDFGSGMPNGRFCNGRTVADIIGDKMGLPR- 319
           F FGDS+ D GNNN L   +     P YG+DF   +  GRF NG   +D +   MG+   
Sbjct: 206 FFFGDSVFDTGNNNNLETKIKSNYRP-YGMDFKFRVATGRFSNGMVASDYLAKYMGVKEI 264

Query: 320 PPAFLDPSVDETVISKSGLNYASGGGGILNETSSLFIQRFSLYKQIELFQG-----TQAF 484
            PA+LDP +    +  +G+++ASGG G  N T+S       +  Q+  FQ       +  
Sbjct: 265 VPAYLDPKIQPNDL-LTGVSFASGGAG-YNPTTSEAANAIPMLDQLTYFQDYIEKVNRLV 322

Query: 485 MREK-----IGQAAADKLFGEAYYVVAMGANDFINT 577
            +EK      G    ++L  +   +V  G+ND I T
Sbjct: 323 RQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIIT 358



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 51/151 (33%), Positives = 66/151 (43%), Gaps = 10/151 (6%)
 Frame = +2

Query: 143 FIFGDSLSDVGNNNYLTKSLARAALPWYGIDFGSGMPNGRFCNGRTVADIIGDKMGLPRP 322
           F FGDS SD G    L+ +  +A  P     FGS  P GR+C+GR V D I + +GLP  
Sbjct: 32  FNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGS--PAGRYCDGRLVIDFIAESLGLPYL 86

Query: 323 PAFLDPSVDETVISKSGLNYASGGGGILNETSSLFIQRFSLYK------QIELFQGTQAF 484
            AFLD SV        G N+A+ G  I    S+L    FS +       Q   F      
Sbjct: 87  SAFLD-SVGSNF--SHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQT 143

Query: 485 MREKIG----QAAADKLFGEAYYVVAMGAND 565
           +R + G           F +A Y   +G ND
Sbjct: 144 VRSRGGVYKTMLPESDSFSKALYTFDIGQND 174



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 50/163 (30%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
 Frame = +2

Query: 143 FIFGDSLSDVGNNNYLTKSLARAAL-PWYGIDFGSGMPNGRFCNGRTVADIIGDKMGLPR 319
           F FGDS SD G      K+ A   L P YG  F      GR+ +GR + D I +   LP 
Sbjct: 36  FNFGDSNSDTGG-----KAAAFYPLNPPYGETFFH-RSTGRYSDGRLIIDFIAESFNLP- 88

Query: 320 PPAFLDPSVDETVIS-KSGLNYASGGGGILNETSSL----FIQRFSL---YKQIELFQGT 475
              +L P +     + K G ++A+ G  I   T+ +        F L   Y Q   F   
Sbjct: 89  ---YLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPR 145

Query: 476 QAFMREKIGQAA----ADKLFGEAYYVVAMGAND----FINTT 580
             F+RE  G  A     +  F +A Y   +G ND    F+N T
Sbjct: 146 SQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGFLNLT 188



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>GLYA_THEVO (Q97CQ5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 426

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/81 (23%), Positives = 34/81 (41%)
 Frame = +2

Query: 146 IFGDSLSDVGNNNYLTKSLARAALPWYGIDFGSGMPNGRFCNGRTVADIIGDKMGLPRPP 325
           +FGDS++ + + N ++       +      +  G+P+ R+  G    D+I DK       
Sbjct: 19  LFGDSVALIASENVMSPLAREVMISDLESRYAEGLPHHRYYQGNNFVDLIEDKTNELLSK 78

Query: 326 AFLDPSVDETVISKSGLNYAS 388
            F     D   IS +  N A+
Sbjct: 79  LFKTEQTDPRPISGTNANSAA 99



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>GLYA_THEAC (Q9HI38) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 426

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
 Frame = +2

Query: 146 IFGDSLSDVGNNNYLTKSLARAALPWYGIDFGSGMPNGRFCNGRTVADIIGDKMGLPRPP 325
           +FG+ ++ + + N ++       +      +  G+P+ R+  G    D+I D+       
Sbjct: 19  MFGEGIALIASENVMSPLAKEVMISDLESRYAEGLPHHRYYQGNYYVDLIEDRTNELLSK 78

Query: 326 AFLDPSVDETVISKSGLN----YASGGGGILNETSSL 424
            F     D   IS +  N    YA  G G L  T SL
Sbjct: 79  LFRTSQTDPRPISGTNANSAAIYALAGPGDLVATPSL 115



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>GLYA_PICTO (Q6L1F6) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 433

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/80 (22%), Positives = 33/80 (41%)
 Frame = +2

Query: 146 IFGDSLSDVGNNNYLTKSLARAALPWYGIDFGSGMPNGRFCNGRTVADIIGDKMGLPRPP 325
           +F +S+  + + N ++       L   G  +  G+P+ R+  G    D+I DK       
Sbjct: 25  LFRESIPLIASENIMSPLAMEMLLTDLGFRYAEGLPHHRYYQGNEYVDVIEDKTTELGKR 84

Query: 326 AFLDPSVDETVISKSGLNYA 385
            F   + D   +S +  N A
Sbjct: 85  LFNSKTFDPRPLSGTNANMA 104



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>LIPS_MOUSE (P54310) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 759

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 162 SESPKMNCTTSPWARPRSRASVRAMASGGFLSQ 64
           SE P++     P   PRSRA V  +  GGF++Q
Sbjct: 324 SEGPRLELRPRPHQAPRSRALVVHIHGGGFVAQ 356



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>FTSK_XANCP (Q8P993) DNA translocase ftsK|
          Length = 785

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
 Frame = +2

Query: 239 GSGMPN---GRFCNGRTVADIIGDKMGLPRPPAFLDPSVDE-------TVISKSGLNYAS 388
           G+ +P+   G F +   V  ++ + +    P A++D  +DE       TV+  +GL  +S
Sbjct: 656 GTALPDRVHGAFVSDEEVHRVV-EHLKASGPVAYVDGVLDEVQTMGDGTVVGATGLPESS 714

Query: 389 GGGGILNETSSLFIQRFSLYKQIELFQGTQAFMREKIGQAAADKL 523
           GGGG  +E+  L+ +   +  +      +    R KIG   A +L
Sbjct: 715 GGGG--DESDPLYDEALRIVTETRRASISGVQRRLKIGYNRAARL 757



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>LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 1068

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 162 SESPKMNCTTSPWARPRSRASVRAMASGGFLSQ 64
           SE P++     P   PRSRA V  +  GGF++Q
Sbjct: 624 SEGPRLELRPRPQQAPRSRALVVHIHGGGFVAQ 656



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>PROB_GEOKA (Q5KYA3) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 374

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 24/73 (32%), Positives = 35/73 (47%)
 Frame = +2

Query: 326 AFLDPSVDETVISKSGLNYASGGGGILNETSSLFIQRFSLYKQIELFQGTQAFMREKIGQ 505
           AFL    DE + +  G+  A G GG+    S L   R +L   + +F GT +  REK+  
Sbjct: 188 AFLPEITDEMIEAAGGIGSAVGTGGM---RSKLLAARKALSFGVSVFIGTGS-GREKLAD 243

Query: 506 AAADKLFGEAYYV 544
             A K  G+  Y+
Sbjct: 244 ILAGK--GDGTYI 254


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,184,747
Number of Sequences: 219361
Number of extensions: 1080237
Number of successful extensions: 3954
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3947
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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