>NUDC_RAT (Q63525) Nuclear migration protein nudC (Nuclear distribution|
           protein C homolog) (c15)
          Length = 332

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 462 EVEKEEGKANKPNAGNGLDMEKYSWTQQLS 551
           E EK++GK  KPN GNG D+  Y WTQ LS
Sbjct: 152 EDEKDKGKL-KPNLGNGADLPNYRWTQTLS 180

>NUDC_HUMAN (Q9Y266) Nuclear migration protein nudC (Nuclear distribution|
           protein C homolog)
          Length = 331

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 462 EVEKEEGKANKPNAGNGLDMEKYSWTQQLS 551
           E EK++GK  KPN GNG D+  Y WTQ LS
Sbjct: 151 EDEKDKGKL-KPNLGNGADLPNYRWTQTLS 179

>NUDC_CHICK (Q5ZIN1) Nuclear migration protein nudC (Nuclear distribution|
           protein C homolog)
          Length = 341

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +3

Query: 468 EKEEGKANKPNAGNGLDMEKYSWTQQLS 551
           E ++GK  KPNAGNG D+  Y WTQ LS
Sbjct: 163 ENDKGKL-KPNAGNGADLPNYRWTQTLS 189

>NUDC_MOUSE (O35685) Nuclear migration protein nudC (Nuclear distribution|
           protein C homolog) (Silica-induced gene 92 protein)
           (SIG-92)
          Length = 332

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +3

Query: 462 EVEKEEGKANKPNAGNGLDMEKYSWTQQLS 551
           E EK++GK  KPN GNG D+  Y WTQ L+
Sbjct: 152 EDEKDKGKL-KPNLGNGADLPNYRWTQTLA 180

>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)|
          Length = 620

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 529 YFSISRPLPAFGLFALPSSFSTSVLPPRPS 440
           Y S+S PLPA G  AL  +   + LP +PS
Sbjct: 558 YHSLSTPLPATGYEALAEASCPTALPQQPS 587


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,734,354
Number of Sequences: 219361
Number of extensions: 343454
Number of successful extensions: 1352
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)