ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart34b01 |
|---|---|
| Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 124 bits (312), Expect = 1e-28 Identities = 56/107 (52%), Positives = 67/107 (62%) Frame = +3 Query: 207 SYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMC 386 +YN WL A+ATWY CG KNVN P S M ACGN PI+ DG+GCG C Sbjct: 38 NYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSC 97 Query: 387 YEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMAR 527 YE++C+ P CSG P + I DMNY P+A YH DLSG AFGS+A+ Sbjct: 98 YEVRCK--EKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAK 142
>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l| 1.0101 and 1.0102) Length = 265 Score = 114 bits (286), Expect = 1e-25 Identities = 61/144 (42%), Positives = 78/144 (54%), Gaps = 3/144 (2%) Frame = +3 Query: 105 MAGVSTNAIALVALLSVLFTSVR---SAVNYDTAMARSYNSGWLPAKATWYXXXXXXXXX 275 MA S + + LVA L +F + V + +Y WL AK+TWY Sbjct: 1 MASSSRSVLLLVAALFAVFLGSAHGIAKVPPGPNITATYGDEWLDAKSTWYGKPTGAGPK 60 Query: 276 XXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVII 455 CG+K+V++ P S M CGN PI+ DG GCG C+EIKC SCSG+P + I Sbjct: 61 DNGGACGYKDVDKPPFSGMTGCGNTPIFKDGRGCGSCFEIKC--TKPESCSGEPVTVHIT 118 Query: 456 DMNYYPVARYHLDLSGTAFGSMAR 527 D N P+A YH DLSG AFGSMA+ Sbjct: 119 DDNEEPIAPYHFDLSGHAFGSMAK 142
>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)| Length = 263 Score = 114 bits (284), Expect = 2e-25 Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 2/139 (1%) Frame = +3 Query: 117 STNAIALVALLSVLFTSVRSAVNYDTA--MARSYNSGWLPAKATWYXXXXXXXXXXXXXX 290 S++ + +VAL +V S + Y WL AK+TWY Sbjct: 4 SSSVLLVVALFAVFLGSAHGIAKVPPGPNITAEYGDKWLDAKSTWYGKPTGAGPKDNGGA 63 Query: 291 CGFKNVNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYY 470 CG+KNV++ P + M CGN PI+ DG GCG C+EIKC SCSG+ + I D N Sbjct: 64 CGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKC--TKPESCSGEAVTVTITDDNEE 121 Query: 471 PVARYHLDLSGTAFGSMAR 527 P+A YH DLSG AFGSMA+ Sbjct: 122 PIAPYHFDLSGHAFGSMAK 140
>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)| Length = 269 Score = 113 bits (283), Expect = 3e-25 Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Frame = +3 Query: 117 STNAIALVALLSVLFTSVRSAVNYDTA--MARSYNSGWLPAKATWYXXXXXXXXXXXXXX 290 S++ + + ALL+V S + + Y WL AK+TWY Sbjct: 10 SSSLLVVAALLAVFVGSAQGIAKVPPGPNITAEYGDKWLDAKSTWYGKPTGAGPKDNGGA 69 Query: 291 CGFKNVNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYY 470 CG+K+V++ P + M CGN PI+ DG GCG C+E+KC + SCSG+P + I D N Sbjct: 70 CGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKC--SKPESCSGEPITVHITDDNEE 127 Query: 471 PVARYHLDLSGTAFGSMAR 527 P+A YH DLSG AFGSMA+ Sbjct: 128 PIAPYHFDLSGHAFGSMAK 146
>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)| Length = 263 Score = 106 bits (265), Expect = 3e-23 Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 2/139 (1%) Frame = +3 Query: 117 STNAIALVALLSVLFTSVRSAVNYDTA--MARSYNSGWLPAKATWYXXXXXXXXXXXXXX 290 S++ + +V L +V S + +Y WL AK+TWY Sbjct: 4 SSSVLLVVVLFAVFLGSAYGIPKVPPGPNITATYGDKWLDAKSTWYGKPTGAGPKDNGGA 63 Query: 291 CGFKNVNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYY 470 CG+K+V++ P S M CGN PI+ G GCG C+EIKC +CSG+P + I D N Sbjct: 64 CGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC--TKPEACSGEPVVVHITDDNEE 121 Query: 471 PVARYHLDLSGTAFGSMAR 527 P+A YH DLSG AFG+MA+ Sbjct: 122 PIAPYHFDLSGHAFGAMAK 140
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 103 bits (257), Expect = 3e-22 Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 1/108 (0%) Frame = +3 Query: 207 SYNSGWLPAKATWYXXXXXXXX-XXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGM 383 +Y S WL A+AT+Y CG+K+V++ P M ACGNEPI+ DG GC Sbjct: 13 TYGSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRA 72 Query: 384 CYEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMAR 527 CYEIKC+ CSG+P + I D NY +A YH DLSG AFG+MA+ Sbjct: 73 CYEIKCK--EPVECSGEPVLVKITDKNYEHIAAYHFDLSGKAFGAMAK 118
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 91.3 bits (225), Expect = 1e-18 Identities = 39/66 (59%), Positives = 48/66 (72%) Frame = +3 Query: 330 MGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTA 509 M ACGN PI+ DG+GCG CYE++C+ P CSG P + I DMNY P+A YH DLSG A Sbjct: 1 MTACGNVPIFKDGKGCGSCYEVRCK--EKPECSGNPVTVFITDMNYEPIAPYHFDLSGKA 58 Query: 510 FGSMAR 527 FGS+A+ Sbjct: 59 FGSLAK 64
>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)| Length = 263 Score = 90.1 bits (222), Expect = 3e-18 Identities = 42/101 (41%), Positives = 57/101 (56%) Frame = +3 Query: 207 SYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMC 386 SY WL A+ CG+K+V++ P M +CGN+PI+ DG+GCG C Sbjct: 36 SYGDKWLEARPPGMVRPRVLAPKDNGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSC 95 Query: 387 YEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTA 509 +EIKC + +CS +P I + DMN P+A YH DLSG A Sbjct: 96 FEIKC--SKPEACSDKPALIHVTDMNDEPIAAYHFDLSGLA 134
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 71.6 bits (174), Expect = 1e-12 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 2/136 (1%) Frame = +3 Query: 123 NAIALVALLSVLFTSVRSAVNYDTAMARSYNSGWLPAKATWYXXXXXXXXXXXXXXCGFK 302 N + + L + T S ++ + A + +S W A +TWY CG+ Sbjct: 14 NLLFALTCLLLNLTHCFSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGA--CGYG 71 Query: 303 N-VNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYPVA 479 N V Q P S M + G ++ G+GCG CY++KC + +CS P +VI D V Sbjct: 72 NAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKC--TSKSACSKNPVTVVITDECPGCVK 129 Query: 480 R-YHLDLSGTAFGSMA 524 H DLSGTAFG+MA Sbjct: 130 ESVHFDLSGTAFGAMA 145
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 61.6 bits (148), Expect = 1e-09 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%) Frame = +3 Query: 105 MAGVSTNAIALVALLSVLFTSVRSAVNYDTAMARSYNSGWLPAKATWYXXXXXXXXXXXX 284 MA S + + +L+ F A++ + + W A TWY Sbjct: 1 MASSSLKCFSFIVVLTTFF-----AISLKPCYCHN-KTHWNTAGITWYGDREGPGTTGGA 54 Query: 285 XXCGFKN-VNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIID- 458 CG+ + V ++P M + G ++ DG+GCG CY +KC++ P C+ +P +++I D Sbjct: 55 --CGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKCDH---PLCTKKPIKVMISDE 109 Query: 459 MNYYPVARYHLDLSGTAFGSMAR 527 H DLSG AFG++A+ Sbjct: 110 CPGCTKESVHFDLSGKAFGALAK 132
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 56.6 bits (135), Expect = 4e-08 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Frame = +3 Query: 213 NSGWLPAKATWYXXXXXXXXXXXXXXCGFKN-VNQYPISSMGACGNEPIYADGEGCGMCY 389 NS WLPA ATWY CG+ V+ P+ + N ++ +GEGCG CY Sbjct: 33 NSHWLPAVATWYGSPNGDGSDGGA--CGYGTLVDVKPLHARVGAVNPILFKNGEGCGACY 90 Query: 390 EIKCEYNNNPSCSGQPRRIVIID-MNYYPVARYHLDLSGTAFGSMA 524 +++C + CS + ++I D H DLSG FG +A Sbjct: 91 KVRC--LDKSICSRRAVTVIITDECPGCSKTSTHFDLSGAVFGRLA 134
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 55.5 bits (132), Expect = 9e-08 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +3 Query: 222 WLPAKATWYXXXXXXXXXXXXXXCGFKN-VNQYPISSMGACGNEPIYADGEGCGMCYEIK 398 WLPA ATWY CG+ + V+ P + + ++ GEGCG CY+++ Sbjct: 40 WLPATATWYGSAEGDGSSGGA--CGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVR 97 Query: 399 CEYNNNPSCSGQPRRIVIIDMN-YYPVAR---YHLDLSGTAFGSMA 524 C + CS + I+ D + P A+ H DLSG AFG MA Sbjct: 98 C--LDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMA 141
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 54.7 bits (130), Expect = 2e-07 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%) Frame = +3 Query: 231 AKATWYXXXXXXXXXXXXXXCGFKN-VNQYPISSMGACGNEPIYADGEGCGMCYEIKCEY 407 A TWY CG+ + V P+ +M + G ++ +G+GCG CY++ C Sbjct: 36 AGVTWYGEPFGAGSTGGA--CGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVC-- 91 Query: 408 NNNPSCSGQPRRIVIID-MNYYPVAR--YHLDLSGTAFGSMAR 527 +P+CSG P + I D P A H+DLSG A G++A+ Sbjct: 92 IGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAK 134
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 52.4 bits (124), Expect = 8e-07 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 9/114 (7%) Frame = +3 Query: 213 NSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYE 392 ++GW+ A AT+Y CG+ N + A + ++ GE CG CY+ Sbjct: 24 SNGWIRAHATYYGVNDSPASLGGA--CGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQ 81 Query: 393 IKCEYNNNPSCSGQPRRIVIIDMNYYP---------VARYHLDLSGTAFGSMAR 527 ++C++ +P + + + N+ P + R+H D+S AF +AR Sbjct: 82 VRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIAR 135
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 46.6 bits (109), Expect = 4e-05 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 14/121 (11%) Frame = +3 Query: 207 SYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMC 386 S ++GWL A AT+Y CG+ N+ + A + ++ DG+ CG C Sbjct: 23 SVSAGWLQAHATFYGGSDASGTMGGA--CGYGNLYTDGYKTNTAALSTALFNDGKSCGGC 80 Query: 387 YEIKCEYNNNPSCSGQPRRIVIIDMNYYP--------------VARYHLDLSGTAFGSMA 524 Y+I C+ P + + I I N+ P R H D++ AF ++A Sbjct: 81 YQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIA 140 Query: 525 R 527 + Sbjct: 141 K 141
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 45.1 bits (105), Expect = 1e-04 Identities = 26/88 (29%), Positives = 40/88 (45%) Frame = +3 Query: 210 YNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCY 389 Y GW+ A AT+Y CG+ N+ + A + ++ +G CG C+ Sbjct: 22 YGGGWINAHATFYGGGDASGTMGGA--CGYGNLYSQGYGTSTAALSTALFNNGLSCGSCF 79 Query: 390 EIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 EI+CE N+ C P IV+ N+ P Sbjct: 80 EIRCE-NDGKWC--LPGSIVVTATNFCP 104
>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)| (Ath-ExpBeta-2.2) Length = 265 Score = 43.5 bits (101), Expect = 4e-04 Identities = 21/58 (36%), Positives = 34/58 (58%) Frame = +3 Query: 354 IYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMAR 527 IY DG GCG C++++C+ N CS + +++ D+N + L LS AF +MA+ Sbjct: 66 IYKDGSGCGACFQVRCK--NPTLCSSKGTTVIVTDLN--KTNQTDLVLSSRAFRAMAK 119
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 43.5 bits (101), Expect = 4e-04 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 1/113 (0%) Frame = +3 Query: 138 VALLSVLFTSVRSAVNYDTAMARSY-NSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQ 314 +AL++ LF + A+ T+ Y GW+ A AT+Y CG+ N+ Sbjct: 1 MALVTFLFIATLGAM---TSHVNGYAGGGWVNAHATFYGGGDASGTMGGA--CGYGNLYS 55 Query: 315 YPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 + A + ++ +G CG C+EI+C+ N+ C P IV+ N+ P Sbjct: 56 QGYGTNTAALSTALFNNGLSCGACFEIRCQ-NDGKWC--LPGSIVVTATNFCP 105
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 43.5 bits (101), Expect = 4e-04 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 14/120 (11%) Frame = +3 Query: 210 YNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCY 389 Y++GW+ A AT+Y CG+ N+ + A + ++ +G CG C+ Sbjct: 21 YDAGWVNAHATFYGGSDASGTMGGA--CGYGNLYSQGYGTNTAALSTALFNNGLSCGACF 78 Query: 390 EIKCEYNNNPSCSGQPRRIVIIDMNYYPVAR--------------YHLDLSGTAFGSMAR 527 EIKC+ ++ C P I++ N+ P +H DLS F +A+ Sbjct: 79 EIKCQ-SDGAWC--LPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQ 135
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = +3 Query: 210 YNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCY 389 Y+SGW+ A+AT+Y CG+ N+ + A + ++ G+ CG C+ Sbjct: 25 YSSGWVNARATFYGGADASGTMGGA--CGYGNLYSQGYGTNTAALSTALFNGGQSCGACF 82 Query: 390 EIKC 401 +IKC Sbjct: 83 QIKC 86
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 42.4 bits (98), Expect = 8e-04 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%) Frame = +3 Query: 147 LSVLFTSVRSAVNYDTAMARSYNSG-WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPI 323 L++LFT+ D + Y+ G W A AT+Y CG+ N+ Sbjct: 5 LAILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGA--CGYGNLYSQGY 62 Query: 324 SSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 + A + ++ +G CG C+E+KC + SG P I+I N+ P Sbjct: 63 GTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSP-SILITATNFCP 111
>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)| (Ath-ExpAlpha-1.25) Length = 257 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 14/125 (11%) Frame = +3 Query: 192 TAMARSYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGE 371 T+MA + W A AT+Y CG+ N+ + ++ +G Sbjct: 21 TSMATYAGTPWRTASATFYGDDTGSATMGGA--CGYGNMYDSGYGVATTALSTALFNEGY 78 Query: 372 GCGMCYEIKCEYNNNPSC-SGQPRRIV----IIDMNYYPVA---------RYHLDLSGTA 509 CG C+++KC ++P+C G P +V I NY + R H DL+ A Sbjct: 79 ACGQCFQLKCV--SSPNCYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPA 136 Query: 510 FGSMA 524 F +A Sbjct: 137 FMKIA 141
>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)| (Ath-ExpBeta-2.1) Length = 265 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/58 (37%), Positives = 34/58 (58%) Frame = +3 Query: 354 IYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMAR 527 IY DG GCG C++++C+ N CS + ++I D+N + L LS AF +MA+ Sbjct: 65 IYKDGAGCGACFQVRCK--NPKLCSTKGTIVMITDLN--KSNQTDLVLSSRAFRAMAK 118
>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)| (Ath-ExpBeta-2.3) Length = 263 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = +3 Query: 354 IYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMAR 527 IY DG GCG C++++C+ N C+ + +++ D+N + L LS AF +MA+ Sbjct: 65 IYKDGAGCGACFQVRCK--NPKLCNSKGTIVMVTDLN--TSNQTDLVLSSRAFRAMAK 118
>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)| (Ath-ExpAlpha-1.4) Length = 255 Score = 39.3 bits (90), Expect = 0.007 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 6/107 (5%) Frame = +3 Query: 222 WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYEIKC 401 W+ A AT+Y CG+ N+ A + ++ G CG C+E+ C Sbjct: 38 WINAHATFYGGGDASGTMGGA--CGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMC 95 Query: 402 EYNNNPSCSGQPRRIVIIDMNYYPVA------RYHLDLSGTAFGSMA 524 N+P + R IV+ N+ P +H DLS + +A Sbjct: 96 V--NDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIA 140
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 38.9 bits (89), Expect = 0.009 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 1/96 (1%) Frame = +3 Query: 189 DTAMARSYNSG-WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYAD 365 D + R ++ G W A AT+Y CG+ N+ + A + ++ Sbjct: 22 DAGIPRVFSGGSWQTAHATFYGGNDASGTMGGA--CGYGNLYSQGYGTNTAALSTSLFNS 79 Query: 366 GEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 G+ CG C+EIKC N+ C + + N+ P Sbjct: 80 GQSCGACFEIKC-VNDPKWCHPGNPSVFVTATNFCP 114
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 38.1 bits (87), Expect = 0.015 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = +3 Query: 210 YNSG-WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMC 386 YN G W A AT+Y CG+ N+ A + ++ +G CG C Sbjct: 26 YNGGGWETAHATFYGGSDASGTMGGA--CGYGNLYSQGYGVNTAALSTALFNNGFSCGAC 83 Query: 387 YEIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 +E+KC + SG P I I N+ P Sbjct: 84 FELKCASDPKWCHSGSP-SIFITATNFCP 111
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 38.1 bits (87), Expect = 0.015 Identities = 19/73 (26%), Positives = 31/73 (42%) Frame = +3 Query: 213 NSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYE 392 ++ W A+A +Y CG+ ++N++ A + ++ G CG CYE Sbjct: 36 DTAWYDARAAYYGDIHGGGTELEGA-CGYGDLNKHGYGLATAALSTALFNSGASCGACYE 94 Query: 393 IKCEYNNNPSCSG 431 I C N SG Sbjct: 95 IMCSPNPQGCLSG 107
>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)| (Ath-ExpAlpha-1.10) Length = 258 Score = 37.4 bits (85), Expect = 0.026 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 15/143 (10%) Frame = +3 Query: 144 LLSVLFTSVRSAVNYDTAMARSYNSG-WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYP 320 +++ + V +A + + Y G W+ A AT+Y CG+ N+ Sbjct: 5 VITFMAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGA--CGYGNLYSQG 62 Query: 321 ISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYP--------- 473 A + ++ +G CG C+E+KC + G P I+I N+ P Sbjct: 63 YGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNP-SILITATNFCPPNFNQASDN 121 Query: 474 -----VARYHLDLSGTAFGSMAR 527 R H DL+ F S+A+ Sbjct: 122 GGWCNPPREHFDLAMPMFLSIAK 144
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 37.4 bits (85), Expect = 0.026 Identities = 22/87 (25%), Positives = 37/87 (42%) Frame = +3 Query: 213 NSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYE 392 N GW AT+Y CG+ N++ A + ++ G+ CG C+E Sbjct: 29 NGGWERGHATFYGGADASGTMGGA--CGYGNLHSQGYGLQTAALSTALFNSGQKCGACFE 86 Query: 393 IKCEYNNNPSCSGQPRRIVIIDMNYYP 473 + CE ++P P I++ N+ P Sbjct: 87 LTCE--DDPEWC-IPGSIIVSATNFCP 110
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 37.0 bits (84), Expect = 0.033 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 14/123 (11%) Frame = +3 Query: 198 MARSYNSG-WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEG 374 +A Y G W A AT+Y CG+ N+ A + ++ DG G Sbjct: 28 VAGYYRPGPWRYAHATFYGDETGGETMGGA--CGYGNLFNSGYGLSTAALSTTLFNDGYG 85 Query: 375 CGMCYEIKCEYNNNPSC-SGQPRRIVIIDM---NYYPVA---------RYHLDLSGTAFG 515 CG C++I C + +P C SG+ + ++ N+Y + R H D++ AF Sbjct: 86 CGQCFQITC--SKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFM 143 Query: 516 SMA 524 +A Sbjct: 144 KLA 146
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 36.6 bits (83), Expect = 0.044 Identities = 18/67 (26%), Positives = 31/67 (46%) Frame = +3 Query: 201 ARSYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCG 380 +++ ++ W A+AT+Y CG+ N+ + A + ++ DG CG Sbjct: 45 SKALDTNWYDARATFYGDIHGGDTQQGA--CGYGNLFRQGYGLATAALSTALFNDGYTCG 102 Query: 381 MCYEIKC 401 CYEI C Sbjct: 103 ACYEIMC 109
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 36.6 bits (83), Expect = 0.044 Identities = 18/65 (27%), Positives = 31/65 (47%) Frame = +3 Query: 213 NSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYE 392 +SGW +AT+Y CG+ ++++ A + ++ +G CG CYE Sbjct: 87 HSGWGHGRATFYGDINGGETQQGA--CGYGDLHKQGYGLETAALSTALFNNGSRCGACYE 144 Query: 393 IKCEY 407 I CE+ Sbjct: 145 IMCEH 149
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 35.8 bits (81), Expect = 0.074 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%) Frame = +3 Query: 132 ALVALLSVLFTSVRSAVNYDTAMARSYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVN 311 ++++++SVLF + GW AT+Y CG+ N+ Sbjct: 10 SIISIISVLFLQG----------THGDDGGWQGGHATFYGGEDASGTMGGA--CGYGNLY 57 Query: 312 QYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPS-CSGQPRRIVIIDMNYYP 473 + A + ++ +G CG CYE+KC N++P C G I + N+ P Sbjct: 58 GQGYGTNTAALSTALFNNGLTCGACYEMKC--NDDPRWCLGS--TITVTATNFCP 108
>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)| (Ath-ExpAlpha-1.9) Length = 262 Score = 35.8 bits (81), Expect = 0.074 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = +3 Query: 210 YNSG-WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMC 386 Y+ G W A AT+Y CG+ N+ A + ++ +G CG C Sbjct: 31 YSGGPWQNAHATFYGGSDASGTMGGA--CGYGNLYSQGYGVNTAALSTALFNNGFSCGAC 88 Query: 387 YEIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 +EIKC + G P I++ N+ P Sbjct: 89 FEIKCTDDPRWCVPGNP-SILVTATNFCP 116
>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)| (Ath-ExpAlpha-1.14) Length = 252 Score = 35.8 bits (81), Expect = 0.074 Identities = 27/118 (22%), Positives = 49/118 (41%) Frame = +3 Query: 120 TNAIALVALLSVLFTSVRSAVNYDTAMARSYNSGWLPAKATWYXXXXXXXXXXXXXXCGF 299 + ++A +A+L+ LF +V + SG AT+Y CG+ Sbjct: 2 SKSLAGLAVLAALFIAVDAF----------RPSGLTNGHATFYGGSDASGTMGGA--CGY 49 Query: 300 KNVNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 ++ +M A + ++ DG CG CY I C++ + + +VI N+ P Sbjct: 50 GDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCP 107
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 35.8 bits (81), Expect = 0.074 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = +3 Query: 201 ARSYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCG 380 +++ + W A+AT+Y CG+ N+ + A + ++ DG CG Sbjct: 51 SKALDPNWYDARATFYGDIHGGDTQQGA--CGYGNLFRQGYGLATAALSTALFNDGYTCG 108 Query: 381 MCYEIKC 401 CYEI C Sbjct: 109 ACYEIMC 115
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 35.8 bits (81), Expect = 0.074 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = +3 Query: 216 SGWLPAKATWYXXXXXXXXXXXXXXCGFKNV--NQYPISSMGACGNEPIYADGEGCGMCY 389 S W PA+AT+Y CG+ ++ + Y ++++G +E ++ G+ CG C+ Sbjct: 38 SEWRPARATYYAATNPRDAVGGA--CGYGDLVKSGYGMATVGL--SETLFERGQICGACF 93 Query: 390 EIKC 401 E++C Sbjct: 94 ELRC 97
>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)| (Ath-ExpAlpha-1.23) Length = 256 Score = 34.7 bits (78), Expect = 0.17 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Frame = +3 Query: 222 WLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYEIKC 401 W A AT CG+ ++ Q + A + ++ G CG C E++C Sbjct: 28 WKIATATLSRDRDGSSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRC 87 Query: 402 EYNNNPSCSGQPRRIVIIDMNYYP--------------VARYHLDLSGTAFGSMA 524 + G P +V+ ++ P + HL+LS AF +A Sbjct: 88 VNHIRWCLQGSP-SVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIA 141
>SDC3_HUMAN (O75056) Syndecan-3 (SYND3)| Length = 384 Score = 33.5 bits (75), Expect = 0.37 Identities = 24/60 (40%), Positives = 28/60 (46%) Frame = +1 Query: 253 RPMAPVPTTTVVLAASRT*TSTQSPPWGHAVTSLYTPTARAVACATRLNASXXXXLPAPA 432 R + P+P TTV A + T SPP AV PT R V+ AT S LP PA Sbjct: 151 RRLLPLPLTTVATARATT-PEAPSPPTTAAVLDTEAPTPRLVSTAT----SRPRALPRPA 205
>EXPR1_ARATH (O23547) Expansin-related protein 1 precursor (AtEXPR1) (At-EXPR1)| (Ath-ExpBeta-3.1) Length = 250 Score = 33.1 bits (74), Expect = 0.48 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +3 Query: 354 IYADGEGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMAR 527 ++ +G GCG CY+++C+ P CS + +V D + LS A+G MAR Sbjct: 69 LWNNGTGCGACYQVRCKI--PPHCSEEGVYVVATDSGEGDGTDF--ILSPKAYGRMAR 122
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 33.1 bits (74), Expect = 0.48 Identities = 23/95 (24%), Positives = 38/95 (40%) Frame = +3 Query: 189 DTAMARSYNSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADG 368 D +S W A+AT+Y CG+ ++ + A + ++ +G Sbjct: 37 DVVSPNGLDSSWYDARATFYGDIHGGETQQGA--CGYGDLFKQGYGLETAALSTALFNEG 94 Query: 369 EGCGMCYEIKCEYNNNPSCSGQPRRIVIIDMNYYP 473 CG CY+I C N+ C P + I N+ P Sbjct: 95 YTCGACYQIMC-VNDPQWC--LPGSVKITATNFCP 126
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/66 (24%), Positives = 30/66 (45%) Frame = +3 Query: 213 NSGWLPAKATWYXXXXXXXXXXXXXXCGFKNVNQYPISSMGACGNEPIYADGEGCGMCYE 392 +S W A+AT+Y CG+ ++ + A + ++ +G CG CY+ Sbjct: 52 DSSWYDARATFYGDIHGGETQQGA--CGYGDLFKQGYGLETAALSTALFNEGYTCGACYQ 109 Query: 393 IKCEYN 410 I C ++ Sbjct: 110 IMCVHD 115
>NUOL_BUCAP (Q8K9X7) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH| dehydrogenase I, chain L) (NDH-1, chain L) Length = 615 Score = 31.2 bits (69), Expect = 1.8 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = -3 Query: 129 WHWWRRQPYWLYRVVSMNLVRLVGYYELAG 40 +H W +QP+W +R + +++L+ + L G Sbjct: 509 YHIWIKQPFWFFRFLKFKIIKLIHKFLLNG 538
>BCSC_XANAC (P58938) Cellulose synthase operon protein C precursor| Length = 1508 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = -2 Query: 223 QPEL*DLAMAVS*LTAERTDVKSTERSATRAMALV-ETPAILALQGRVY 80 QP D A + A ++D++ ER RA+A E+P +LA GRVY Sbjct: 756 QPSDLDTLTAAANSAAAQSDLRDAERYLQRALAQAPESPDVLAAAGRVY 804
>EXPR3_ARATH (Q9ZV52) Expansin-related protein 3 precursor (AtEXPR3)| (Ath-ExpGamma-1.2) Length = 130 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = +3 Query: 354 IYADGEGCGMCYEIKC---EYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMA 524 ++ +G CG Y ++C YN + +C+G+ + ++D P L+LS AF +A Sbjct: 58 LWQNGRACGRRYRVRCIGATYNFDRACTGRTVDVKVVDFCREP-CNGDLNLSRDAFRVIA 116
>GYRB_BACSU (P05652) DNA gyrase subunit B (EC 5.99.1.3)| Length = 638 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 294 GFKNVNQYPISSMGACGNEPIYADGEGCGMCYEIKCEYNNN 416 G K+ +Y S EPIY +GE G+ E+ +YN++ Sbjct: 225 GIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQYNDS 265
>EXPR2_ARATH (Q9M0C2) Expansin-related protein 2 precursor (AtEXPR2)| (Ath-ExpGamma-1.1) Length = 123 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = +3 Query: 330 MGACGNEPIYADGEGCGMCYEIKCEYNNNP---SCSGQPRRIVIIDMNYYPVARYHLDLS 500 M A ++ ++ +G CG + +KC N C+G+ ++ I+D A LDLS Sbjct: 44 MIAAASDTLWDNGRVCGKMFTVKCSGPRNAVPHPCTGKSVKVKIVDHCPSGCAS-TLDLS 102 Query: 501 GTAFGSMA 524 AF +A Sbjct: 103 REAFAQIA 110
>TATB_XANCP (Q8P3H9) Sec-independent protein translocase protein tatB homolog| Length = 195 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 253 RPMAPVPTTTVVLAASRT*TSTQSPPWGHAVTSLYTPTARAVACAT 390 +PMAP P T+V A + TSTQ + + PTA A A +T Sbjct: 151 QPMAPAPKQTLVPAPHGSLTSTQ--------VTTHAPTASATASST 188
>KKR1_YEAST (P36003) Probable serine/threonine-protein kinase YKL171W (EC| 2.7.11.1) Length = 928 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 376 QPSPSAYIGSLPHAPMEEIGY 314 +P PS YIGSLP+A E + Y Sbjct: 733 EPEPSKYIGSLPYASPELLRY 753
>RL1_RHOBA (Q7UI03) 50S ribosomal protein L1| Length = 225 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +1 Query: 13 PRSSTTTPDSGEFIVSYKSNKV 78 PR+ T TPD G+ + YK+ KV Sbjct: 139 PRAGTVTPDVGKVVSEYKAGKV 160
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +1 Query: 274 TTTVVLAASRT*TSTQSPPWG--HAVTSLYTPTARAVACATRLNASXXXXLPA 426 TTT ++ T +STQ PP G H T+ TPT + + LPA Sbjct: 3671 TTTESTGSTATPSSTQGPPAGTPHVSTTATTPTVTSSKATPFSSPGTATALPA 3723 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,699,771 Number of Sequences: 219361 Number of extensions: 1266278 Number of successful extensions: 3927 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 3732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3888 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
