Clone Name | bart33h09 |
---|---|
Clone Library Name | barley_pub |
>gb|AY677179.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS3) mRNA, complete cds Length = 1576 Score = 389 bits (196), Expect = e-105 Identities = 199/200 (99%) Strand = Plus / Plus Query: 292 gcagcgtggcgcacctggcggcggtggggctggcgtcgcggcagtaccactcgggcggcg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 gcagcgtggcgcacctggcggcggtggggctggcgtcgcggcagtaccactcgggcggcg 304 Query: 352 cggggcggatggcgtacgaggaggccggcgggcggcacgggcgggtgccgctggggctga 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 cggggcggatggcgtacgaggaggccggcgggcggcacgggcgggtgccgctggggctga 364 Query: 412 agcgcaaggggctgcgcgtggtggtgaccggcggggccgggttcgtgggcagccacctgg 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 agcgcaaggggctgcgcgtggtggtgaccggcggggccgggttcgtgggcagccacctgg 424 Query: 472 tggaacggctgctggcgcgc 491 |||| ||||||||||||||| Sbjct: 425 tggaccggctgctggcgcgc 444 Score = 252 bits (127), Expect = 9e-64 Identities = 127/127 (100%) Strand = Plus / Plus Query: 140 cgagagcaagccgcggaccaggcagcagctgccgcagccgctccggtacgtgctgggcga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 cgagagcaagccgcggaccaggcagcagctgccgcagccgctccggtacgtgctgggcga 152 Query: 200 gcagcgcctcgtcttctccttggtcggcatggccctcgccaccctcgtcttcctcctcct 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gcagcgcctcgtcttctccttggtcggcatggccctcgccaccctcgtcttcctcctcct 212 Query: 260 ctccccc 266 ||||||| Sbjct: 213 ctccccc 219 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 48 tccaccgcgtgatcccatcggccgtccatggcgtcctccgagctcaccta 97 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 1 tccaccgcgtgatcccatcgcccgcccatggcgtcctccgagctcaccta 50
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 395 ggtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggtt 454 ||||||||||||||||||||| |||||||| || ||| ||||||||||||| |||||||| Sbjct: 147006 ggtgccgctggggctgaagcggaaggggctccgggtgctggtgaccggcggcgccgggtt 146947 Query: 455 cgtgggcagccacctggtggaacggctgctggcgcgc 491 |||||| |||||||||||||| |||||| ||| |||| Sbjct: 146946 cgtggggagccacctggtggaccggctggtggagcgc 146910
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 395 ggtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggtt 454 ||||||||||||||||||||| |||||||| || ||| ||||||||||||| |||||||| Sbjct: 183 ggtgccgctggggctgaagcggaaggggctccgggtgctggtgaccggcggcgccgggtt 124 Query: 455 cgtgggcagccacctggtggaacggctgctggcgcgc 491 |||||| |||||||||||||| |||||| ||| |||| Sbjct: 123 cgtggggagccacctggtggaccggctggtggagcgc 87
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Minus Query: 395 ggtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggtt 454 ||||||||||||||||||||| |||||||| || ||| ||||||||||||| |||||||| Sbjct: 17202871 ggtgccgctggggctgaagcggaaggggctccgggtgctggtgaccggcggcgccgggtt 17202812 Query: 455 cgtgggcagccacctggtggaacggctgctggcgcgc 491 |||||| |||||||||||||| |||||| ||| |||| Sbjct: 17202811 cgtggggagccacctggtggaccggctggtggagcgc 17202775 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 238 ccaccctcgtcttcctcctcctctcccc 265 |||||||| |||||||||||| |||||| Sbjct: 22319227 ccaccctcatcttcctcctcccctcccc 22319254
>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1555 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 395 ggtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggtt 454 ||||||||||||||||||||| |||||||| || ||| ||||||||||||| |||||||| Sbjct: 428 ggtgccgctggggctgaagcggaaggggctccgggtgctggtgaccggcggcgccgggtt 487 Query: 455 cgtgggcagccacctggtggaacggctgctggcgcgc 491 |||||| |||||||||||||| |||||| ||| |||| Sbjct: 488 cgtggggagccacctggtggaccggctggtggagcgc 524
>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full insert sequence Length = 1734 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 395 ggtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggtt 454 ||||||||||||||||||||| |||||||| || ||| ||||||||||||| |||||||| Sbjct: 502 ggtgccgctggggctgaagcggaaggggctccgggtgctggtgaccggcggcgccgggtt 561 Query: 455 cgtgggcagccacctggtggaacggctgctggcgcgc 491 |||||| |||||||||||||| |||||| ||| |||| Sbjct: 562 cgtggggagccacctggtggaccggctggtggagcgc 598
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 9e-24 Identities = 87/96 (90%) Strand = Plus / Plus Query: 396 gtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggttc 455 |||||||||||||||||| |||||||| |||||||||||||| || || ||||||||| Sbjct: 28441549 gtgccgctggggctgaagaagaaggggctccgcgtggtggtgacggggggagccgggttc 28441608 Query: 456 gtgggcagccacctggtggaacggctgctggcgcgc 491 ||||| |||||||||||||| ||||||||||||||| Sbjct: 28441609 gtggggagccacctggtggaccggctgctggcgcgc 28441644
>dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-6 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1498 Score = 119 bits (60), Expect = 9e-24 Identities = 87/96 (90%) Strand = Plus / Plus Query: 396 gtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggttc 455 |||||||||||||||||| |||||||| |||||||||||||| || || ||||||||| Sbjct: 411 gtgccgctggggctgaagaagaaggggctccgcgtggtggtgacggggggagccgggttc 470 Query: 456 gtgggcagccacctggtggaacggctgctggcgcgc 491 ||||| |||||||||||||| ||||||||||||||| Sbjct: 471 gtggggagccacctggtggaccggctgctggcgcgc 506
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 119 bits (60), Expect = 9e-24 Identities = 87/96 (90%) Strand = Plus / Plus Query: 396 gtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggttc 455 |||||||||||||||||| |||||||| |||||||||||||| || || ||||||||| Sbjct: 7301 gtgccgctggggctgaagaagaaggggctccgcgtggtggtgacggggggagccgggttc 7360 Query: 456 gtgggcagccacctggtggaacggctgctggcgcgc 491 ||||| |||||||||||||| ||||||||||||||| Sbjct: 7361 gtggggagccacctggtggaccggctgctggcgcgc 7396
>dbj|AK099614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050E02, full insert sequence Length = 1965 Score = 119 bits (60), Expect = 9e-24 Identities = 87/96 (90%) Strand = Plus / Plus Query: 396 gtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggttc 455 |||||||||||||||||| |||||||| |||||||||||||| || || ||||||||| Sbjct: 414 gtgccgctggggctgaagaagaaggggctccgcgtggtggtgacggggggagccgggttc 473 Query: 456 gtgggcagccacctggtggaacggctgctggcgcgc 491 ||||| |||||||||||||| ||||||||||||||| Sbjct: 474 gtggggagccacctggtggaccggctgctggcgcgc 509
>gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS2) mRNA, complete cds Length = 1380 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 395 ggtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggtt 454 |||||| || ||||| |||||||||||||||||||| | || |||||| | ||||| || Sbjct: 210 ggtgcccctcgggctcaagcgcaaggggctgcgcgtcctcgtcaccggcagcgccggctt 269 Query: 455 cgtgggcagccacctggtggaacggctgctggcgcgc 491 ||||||||||||||| ||||| || ||| |||||||| Sbjct: 270 cgtgggcagccacctcgtggaccgcctggtggcgcgc 306
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 399 ccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggttcgtg 458 |||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| |||||| Sbjct: 17541 ccgctggggctgaaacgcaaagggctgcgagtggtggtaaccggcggtgccggtttcgtg 17600 Query: 459 gg 460 || Sbjct: 17601 gg 17602
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 399 ccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggttcgtg 458 |||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| |||||| Sbjct: 103719 ccgctggggctgaaacgcaaagggctgcgagtggtggtaaccggcggtgccggtttcgtg 103778 Query: 459 gg 460 || Sbjct: 103779 gg 103780
>gb|BT017677.1| Zea mays clone EL01N0443A11.c mRNA sequence Length = 1211 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 422 gctgcgcgtggtggtgaccggcggggccgggttcgtgggcagccacctggtggaacggct 481 |||||| ||| | ||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 15 gctgcgggtgctcgtgacgggcggcgccgggttcgtggggagccacctggtggaccggct 74 Query: 482 gctggcgcgc 491 | ||| |||| Sbjct: 75 gttggagcgc 84
>gb|AY106346.1| Zea mays PCO069392 mRNA sequence Length = 1708 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 395 ggtgccgctggggctgaagcgcaaggggctgcgcgtggtggtgaccggcggggccgggtt 454 |||||||||||| || ||| | |||| ||| ||||| | || |||||||| ||||| || Sbjct: 400 ggtgccgctgggcctcaagaggaaggtgctccgcgtcctcgtcaccggcggcgccggctt 459 Query: 455 cgtgggcagccacctggtgga 475 ||| ||||||||||||||||| Sbjct: 460 cgtcggcagccacctggtgga 480
>ref|NM_190499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 438 accggcggggccgggttcgtgggcagccacctggtggaacggctgctgg 486 ||||| |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 316 accggaggggccgggttcgttggcagccacctcgtcgacaggctgctgg 364
>ref|XM_866137.1| PREDICTED: Bos taurus similar to SERTA domain containing 4 (LOC614583), mRNA Length = 4989 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 ||||||||||||||||||||||||| Sbjct: 2859 cctcgtcttcctcctcctctccccc 2883
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 438 accggcggggccgggttcgtgggcagccacctggtggaacggctgctgg 486 ||||| |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 35890632 accggaggggccgggttcgttggcagccacctcgtcgacaggctgctgg 35890680 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ctcgtcttcctcctcctctcc 263 ||||||||||||||||||||| Sbjct: 6016085 ctcgtcttcctcctcctctcc 6016105 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 1842945 tcttcctcctcctctccccc 1842964
>gb|AY677176.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS4) mRNA, complete cds Length = 1455 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 438 accggcggggccgggttcgtgggcagccacctggtggaacggctgctgg 486 ||||||||||| || ||||||||||||||||| || || ||||||||| Sbjct: 317 accggcggggcgggcttcgtgggcagccacctcgtcgacaggctgctgg 365
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 438 accggcggggccgggttcgtgggcagccacctggtggaacggctgctgg 486 ||||| |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 155090 accggaggggccgggttcgttggcagccacctcgtcgacaggctgctgg 155138
>dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1404 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 438 accggcggggccgggttcgtgggcagccacctggtggaacggctgctgg 486 ||||| |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 316 accggaggggccgggttcgttggcagccacctcgtcgacaggctgctgg 364
>dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F13, full insert sequence Length = 2387 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 438 accggcggggccgggttcgtgggcagccacctggtggaacggctgctgg 486 ||||| |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 349 accggaggggccgggttcgttggcagccacctcgtcgacaggctgctgg 397
>dbj|AK062894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-E07, full insert sequence Length = 974 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 438 accggcggggccgggttcgtgggcagccacctggtggaacggctgctgg 486 ||||| |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 359 accggaggggccgggttcgttggcagccacctcgtcgacaggctgctgg 407
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 433 tggtgaccggcggggccgggttcgtgggcagccacctggtgga 475 |||| |||||||||||||| ||| | |||||||| |||||||| Sbjct: 124318 tggtcaccggcggggccggtttcatcggcagccatctggtgga 124360 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cgtgctgggcgagcagcgcct 208 ||||||||||||||||||||| Sbjct: 2409743 cgtgctgggcgagcagcgcct 2409723
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete sequence Length = 20300 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 433 tggtgaccggcggggccgggttc 455 ||||||||||||||||||||||| Sbjct: 5874 tggtgaccggcggggccgggttc 5852
>ref|NM_104842.1| Arabidopsis thaliana unknown protein AT1G61600 mRNA, complete cds Length = 1266 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 cgtcttcctcctcctctccccc 266 |||||||||||||||||||||| Sbjct: 972 cgtcttcctcctcctctccccc 951
>ref|XM_523416.1| PREDICTED: Pan troglodytes AT-binding transcription factor 1 (LOC468024), mRNA Length = 13500 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctct 261 |||||||||||||||||||||| Sbjct: 990 accctcgtcttcctcctcctct 969
>ref|NM_006885.2| Homo sapiens AT-binding transcription factor 1 (ATBF1), mRNA Length = 11893 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctct 261 |||||||||||||||||||||| Sbjct: 2143 accctcgtcttcctcctcctct 2122
>gb|AC002044.1|HUAC002044 Human Chromosome 16 BAC clone CIT987SK-A-418G10, complete sequence Length = 218074 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctct 261 |||||||||||||||||||||| Sbjct: 135812 accctcgtcttcctcctcctct 135791
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 cgccaccctcgtcttcctcctc 257 |||||||||||||||||||||| Sbjct: 2797512 cgccaccctcgtcttcctcctc 2797533
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel gene, the FOXP4 gene for forkhead box P4 and five CpG islands, complete sequence Length = 180547 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctcc 263 |||||||||||||||||||||| Sbjct: 76526 cctcgtcttcctcctcctctcc 76547
>dbj|AK155519.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630310I22 product:epilepsy, progressive myoclonic epilepsy, type 2 gene alpha, full insert sequence Length = 2415 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 ggcgtacgaggaggccggcggg 383 |||||||||||||||||||||| Sbjct: 241 ggcgtacgaggaggccggcggg 262
>dbj|AK041609.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630024K09 product:hypothetical Glycosyl hydrolase, starch-binding domain containing protein, full insert sequence Length = 2355 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 ggcgtacgaggaggccggcggg 383 |||||||||||||||||||||| Sbjct: 174 ggcgtacgaggaggccggcggg 195
>gb|AC157018.6| Mus musculus 10 BAC RP24-414A19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146007 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 ggcgtacgaggaggccggcggg 383 |||||||||||||||||||||| Sbjct: 78921 ggcgtacgaggaggccggcggg 78942
>gb|AC132068.2| Homo sapiens chromosome 16 clone CTD-2326C4, complete sequence Length = 142641 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctct 261 |||||||||||||||||||||| Sbjct: 43937 accctcgtcttcctcctcctct 43916
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 ccacctggtggaacggctgctggcgc 489 ||||||||||||||| |||||||||| Sbjct: 7685479 ccacctggtggaacgcctgctggcgc 7685504 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 ctcgccaccctcgtcttcctcc 255 |||||||||||||||||||||| Sbjct: 2176246 ctcgccaccctcgtcttcctcc 2176267
>gb|AF124044.1|AF124044 Mus musculus protein-tyrosine phosphatase (Epm2a) mRNA, complete cds Length = 1419 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 ggcgtacgaggaggccggcggg 383 |||||||||||||||||||||| Sbjct: 267 ggcgtacgaggaggccggcggg 288
>ref|NM_010146.1| Mus musculus epilepsy, progressive myoclonic epilepsy, type 2 gene alpha (Epm2a), mRNA Length = 1419 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 ggcgtacgaggaggccggcggg 383 |||||||||||||||||||||| Sbjct: 267 ggcgtacgaggaggccggcggg 288
>gb|L32832.1|HUMZFHP Homo sapiens zinc finger homeodomain protein (ATBF1-A) mRNA, complete cds Length = 11893 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctct 261 |||||||||||||||||||||| Sbjct: 2143 accctcgtcttcctcctcctct 2122
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 catggcgtcctccgagctcacc 95 |||||||||||||||||||||| Sbjct: 771836 catggcgtcctccgagctcacc 771815
>gb|AC005850.1| Arabidopsis thaliana chromosome I BAC T25B24 genomic sequence, complete sequence Length = 84432 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 cgtcttcctcctcctctccccc 266 |||||||||||||||||||||| Sbjct: 40753 cgtcttcctcctcctctccccc 40774
>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete sequence Length = 199086 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 101308 cctcctcttcctcctcctctccccc 101284
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 43065 cctcctcttcctcctcctctccccc 43089
>gb|AC158308.4| Mus musculus chromosome 3, clone RP23-182M12, complete sequence Length = 176856 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctct 261 ||||||||||||||||||||| Sbjct: 152931 ccctcgtcttcctcctcctct 152951
>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence Length = 198404 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 107956 cctcctcttcctcctcctctccccc 107932 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 107800 cctcctcttcctcctcctctccccc 107776
>ref|NM_027295.1| Mus musculus RAB28, member RAS oncogene family (Rab28), mRNA Length = 1667 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 gaggaggccggcgggcggcacgggcgggt 397 |||||||||||||||| ||||| |||||| Sbjct: 107 gaggaggccggcgggctgcacgagcgggt 79
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 145025 cctcttcttcctcctcctctccccc 145049
>gb|BC076576.1| Mus musculus F-box and leucine-rich repeat protein 11, mRNA (cDNA clone MGC:100281 IMAGE:6840591), complete cds Length = 5175 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2975 cctcctcttcctcctcctctccccc 2951
>ref|NM_001001984.1| Mus musculus F-box and leucine-rich repeat protein 11 (Fbxl11), mRNA Length = 5175 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2975 cctcctcttcctcctcctctccccc 2951
>gb|AC132332.2| Mus musculus BAC clone RP24-222H7 from chromosome 10, complete sequence Length = 155268 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctccc 264 ||||||||||||||||||||| Sbjct: 88932 tcgtcttcctcctcctctccc 88952
>gb|AC140073.4| Mus musculus BAC clone RP23-282N20 from chromosome 19, complete sequence Length = 245582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 98892 cctcctcttcctcctcctctccccc 98868
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 ||||| ||||||||||||||||||| Sbjct: 7860514 cctcgccttcctcctcctctccccc 7860538
>gb|AC121079.20| Mus musculus chromosome 3, clone RP24-178P12, complete sequence Length = 177802 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 93326 cctcttcttcctcctcctctccccc 93350
>ref|XM_817513.1| Trypanosoma brucei TREU927 RNA editing 3' exouridylylase MP99 (Tb10.70.3850) partial mRNA Length = 2724 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 159 aggcagcagctgccgcagccgctccggta 187 |||||| ||| |||||||||||||||||| Sbjct: 571 aggcagaagcagccgcagccgctccggta 543
>ref|XM_860104.1| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 9 (LOC483702), mRNA Length = 4114 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2997 cctcctcttcctcctcctctccccc 2973
>ref|XM_860088.1| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 8 (LOC483702), mRNA Length = 3901 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2784 cctcctcttcctcctcctctccccc 2760
>ref|XM_860070.1| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 7 (LOC483702), mRNA Length = 4192 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 3075 cctcctcttcctcctcctctccccc 3051
>ref|XM_860047.1| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 6 (LOC483702), mRNA Length = 4159 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 3042 cctcctcttcctcctcctctccccc 3018
>ref|XM_860026.1| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 5 (LOC483702), mRNA Length = 4225 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 3108 cctcctcttcctcctcctctccccc 3084
>ref|XM_860009.1| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 4 (LOC483702), mRNA Length = 4180 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 3063 cctcctcttcctcctcctctccccc 3039
>ref|XM_859992.1| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 3 (LOC483702), mRNA Length = 2826 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 1709 cctcctcttcctcctcctctccccc 1685
>ref|XM_540823.2| PREDICTED: Canis familiaris similar to F-box and leucine-rich repeat protein 11, transcript variant 1 (LOC483702), mRNA Length = 4585 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 3468 cctcctcttcctcctcctctccccc 3444
>gb|AC126556.4| Mus musculus BAC clone RP23-64L3 from chromosome 15, complete sequence Length = 179685 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 169247 cctcttcttcctcctcctctccccc 169223
>gb|BC037117.1| Mus musculus F-box and leucine-rich repeat protein 11, mRNA (cDNA clone IMAGE:4506699), with apparent retained intron Length = 4173 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 1959 cctcctcttcctcctcctctccccc 1935
>gb|BC036264.1| Mus musculus F-box and leucine-rich repeat protein 11, mRNA (cDNA clone IMAGE:4016481) Length = 3304 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 1109 cctcctcttcctcctcctctccccc 1085
>gb|AC124187.3| Mus musculus BAC clone RP23-237I24 from 18, complete sequence Length = 172828 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 168072 cctcctcttcctcctcctctccccc 168096
>ref|XM_845999.1| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1), transcript variant 2 (LOC489729), mRNA Length = 11346 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctc 260 ||||||||||||||||||||| Sbjct: 1464 accctcgtcttcctcctcctc 1444
>ref|XM_546849.2| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1), transcript variant 1 (LOC489729), mRNA Length = 11373 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctc 260 ||||||||||||||||||||| Sbjct: 1464 accctcgtcttcctcctcctc 1444
>gb|BC056905.1| Homo sapiens F-box and leucine-rich repeat protein 11, mRNA (cDNA clone IMAGE:6171996), partial cds Length = 4781 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 821 cctcctcttcctcctcctctccccc 797
>gb|BC057051.1| Mus musculus F-box and leucine-rich repeat protein 11, mRNA (cDNA clone IMAGE:5708345), partial cds Length = 2983 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 783 cctcctcttcctcctcctctccccc 759
>gb|AC104329.22| Mus musculus strain C57BL/6J clone rp23-418c12 map 3, complete sequence Length = 197096 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 132472 cctcttcttcctcctcctctccccc 132448
>gb|AC118541.12| Mus musculus strain 129/SvJ chromosome 17 clone mgs1-205i23, complete sequence Length = 179569 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 130536 cctcttcttcctcctcctctccccc 130512
>gb|BC047371.1| Homo sapiens F-box and leucine-rich repeat protein 11, mRNA (cDNA clone MGC:48461 IMAGE:5270744), complete cds Length = 5700 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2160 cctcctcttcctcctcctctccccc 2136
>gb|BC066895.1| Homo sapiens protein inhibitor of activated STAT, 4, mRNA (cDNA clone MGC:86982 IMAGE:5261627), complete cds Length = 1769 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||||||||||||||||||| |||| Sbjct: 1481 cctcgtcttcctcctcctcttcccc 1457
>gb|AY037871.2| Oryza sativa soluble acid invertase bfruct3 mRNA, complete cds Length = 2481 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 359 gatggcgtacgaggaggccggcgggcggc 387 ||||||| ||| ||||||||||||||||| Sbjct: 222 gatggcggacggggaggccggcgggcggc 194
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 76259 cctcctcttcctcctcctctccccc 76235 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 76128 cctcctcttcctcctcctctccccc 76104
>gb|AC036125.7| Homo sapiens chromosome 18, clone RP11-482F20, complete sequence Length = 172579 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctct 261 ||||||||||||||||||||| Sbjct: 168835 ccctcgtcttcctcctcctct 168815
>gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166249 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 gcagcagctgccgcagccgct 181 ||||||||||||||||||||| Sbjct: 55536 gcagcagctgccgcagccgct 55556
>gb|AC104703.3| Drosophila melanogaster 3L BAC RP98-35M1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185404 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 gcagcagctgccgcagccgct 181 ||||||||||||||||||||| Sbjct: 103991 gcagcagctgccgcagccgct 104011
>ref|NM_140424.1| Drosophila melanogaster CG9007-RA (CG9007), mRNA Length = 12640 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcagcagctgccgcagccgct 181 ||||||||||||||||||||| Sbjct: 5023 gcagcagctgccgcagccgct 5003
>dbj|AK141779.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030064C09 product:F-box and leucine-rich repeat protein 11, full insert sequence Length = 2831 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 651 cctcctcttcctcctcctctccccc 627
>ref|NM_012308.1| Homo sapiens F-box and leucine-rich repeat protein 11 (FBXL11), mRNA Length = 6210 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2690 cctcctcttcctcctcctctccccc 2666
>dbj|AK159493.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420021I10 product:RAB28, member RAS oncogene family, full insert sequence Length = 1631 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 gaggaggccggcgggcggcacgggcgggt 397 |||||||||||||||| ||||| |||||| Sbjct: 107 gaggaggccggcgggctgcacgagcgggt 79
>gb|AC158544.1| Mus musculus 10 BAC RP24-212P21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctccc 264 ||||||||||||||||||||| Sbjct: 139002 tcgtcttcctcctcctctccc 139022
>dbj|AK012286.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700023P08 product:similar to RAB28, MEMBER RAS ONCOGENE FAMILY [Mus musculus], full insert sequence Length = 865 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 gaggaggccggcgggcggcacgggcgggt 397 |||||||||||||||| ||||| |||||| Sbjct: 110 gaggaggccggcgggctgcacgagcgggt 82
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 ||||| ||||||||||||||||||| Sbjct: 7858349 cctcgccttcctcctcctctccccc 7858373
>gb|AC102600.11| Mus musculus chromosome 3, clone RP23-376E16, complete sequence Length = 131703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctct 261 ||||||||||||||||||||| Sbjct: 48178 ccctcgtcttcctcctcctct 48158
>gb|BC064360.1| Homo sapiens F-box and leucine-rich repeat protein 11, mRNA (cDNA clone MGC:74784 IMAGE:5534384), complete cds Length = 5086 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2863 cctcctcttcctcctcctctccccc 2839
>gb|AY228172.1| Trypanosoma brucei RNA editing complex protein MP99 (MP99) gene, complete cds; nuclear gene for mitochondrial product Length = 2724 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 159 aggcagcagctgccgcagccgctccggta 187 |||||| ||| |||||||||||||||||| Sbjct: 571 aggcagaagcagccgcagccgctccggta 543
>gb|AC010300.8| Homo sapiens chromosome 19 clone CTB-176F20, complete sequence Length = 73684 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 ||||||| ||||||||||||||||| Sbjct: 38332 cctcgtcctcctcctcctctccccc 38356
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 ||||| ||||||||||||||||||| Sbjct: 46112 cctcgccttcctcctcctctccccc 46136
>ref|XM_341983.2| PREDICTED: Rattus norvegicus F-box and leucine-rich repeat protein 11 (predicted) (Fbxl11_predicted), mRNA Length = 6870 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 3419 cctcctcttcctcctcctctccccc 3395
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 accctcgtcttcctcctcctctccc 264 |||||| |||||||||||||||||| Sbjct: 28271 accctcttcttcctcctcctctccc 28247
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ctcgtcttcctcctcctctcc 263 ||||||||||||||||||||| Sbjct: 83973 ctcgtcttcctcctcctctcc 83993
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ctcgtcttcctcctcctctcc 263 ||||||||||||||||||||| Sbjct: 40442 ctcgtcttcctcctcctctcc 40462
>dbj|AK173084.1| Mus musculus mRNA for mKIAA1004 protein Length = 3410 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 1228 cctcctcttcctcctcctctccccc 1204
>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19, complete sequence Length = 200523 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctct 261 ||||||||| ||||||||||||||| Sbjct: 100958 gccaccctcctcttcctcctcctct 100934
>dbj|AK024505.1| Homo sapiens mRNA for FLJ00115 protein, partial cds Length = 4890 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2689 cctcctcttcctcctcctctccccc 2665
>dbj|AK121154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O05, full insert sequence Length = 1956 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 ||||| ||||||||||||||||||| Sbjct: 243 cctcgccttcctcctcctctccccc 267
>gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, complete sequence Length = 160247 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 86473 cctcctcttcctcctcctctccccc 86449
>gb|AF179221.1|AF179221 Homo sapiens F-box protein Lilina (LILINA) mRNA, complete cds Length = 4107 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 587 cctcctcttcctcctcctctccccc 563
>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete sequence Length = 350428 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcagcagctgccgcagccgct 181 ||||||||||||||||||||| Sbjct: 272575 gcagcagctgccgcagccgct 272555
>gb|AC102858.11| Mus musculus chromosome 5, clone RP24-507F5, complete sequence Length = 176211 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 gaggaggccggcgggcggcacgggcgggt 397 |||||||||||||||| ||||| |||||| Sbjct: 132464 gaggaggccggcgggctgcacgagcgggt 132436
>gb|DQ333338.1| Oryza sativa (japonica cultivar-group) UDP-glucuronic acid 4-epimerase isoform 1 mRNA, complete cds Length = 1455 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 ||||| ||||||||||||||||||| Sbjct: 180 cctcgccttcctcctcctctccccc 204
>dbj|AP001885.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-157K17, complete sequence Length = 173052 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 104162 cctcctcttcctcctcctctccccc 104138
>gb|U92042.1|CPU92042 Cryphonectria parasitica mating type 1 pheromone precursor (mf1-1) gene, complete cds Length = 3412 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 308 ggcggcggtggggctggcgtcgcgg 332 |||||||| |||||||||||||||| Sbjct: 1916 ggcggcggcggggctggcgtcgcgg 1892
>emb|BX293557.5| Mouse DNA sequence from clone RP23-324A16 on chromosome 2, complete sequence Length = 67003 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 28824 cctcctcttcctcctcctctccccc 28800
>gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, complete sequence Length = 194685 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 4977 cctcctcttcctcctcctctccccc 4953
>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence Length = 171495 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 96014 cctcctcttcctcctcctctccccc 96038
>gb|AC124592.6| Mus musculus BAC clone RP23-137M18 from 15, complete sequence Length = 204483 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 154907 cctcttcttcctcctcctctccccc 154931
>gb|BC004580.1| Mus musculus RAB28, member RAS oncogene family, mRNA (cDNA clone MGC:8039 IMAGE:3587008), complete cds Length = 1667 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 gaggaggccggcgggcggcacgggcgggt 397 |||||||||||||||| ||||| |||||| Sbjct: 107 gaggaggccggcgggctgcacgagcgggt 79
>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence Length = 234363 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 102931 cctcttcttcctcctcctctccccc 102907
>emb|AL669938.9| Mouse DNA sequence from clone RP23-264N2 on chromosome 4, complete sequence Length = 199071 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gcagcagctgccgcagccgct 181 ||||||||||||||||||||| Sbjct: 124102 gcagcagctgccgcagccgct 124082
>dbj|AB023221.2| Homo sapiens mRNA for KIAA1004 protein, partial cds Length = 4966 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctccccc 266 |||| |||||||||||||||||||| Sbjct: 2765 cctcctcttcctcctcctctccccc 2741
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 19065 tcttcctcctcctctccccc 19084
>gb|AC150429.2| Branchiostoma floridae clone CH302-92H15, complete sequence Length = 112163 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ggcggcggtggggctggcgt 327 |||||||||||||||||||| Sbjct: 10474 ggcggcggtggggctggcgt 10455
>gb|AC118213.8| Mus musculus chromosome 1, clone RP24-529B23, complete sequence Length = 133485 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 132968 tcttcctcctcctctccccc 132949 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 132942 tcttcctcctcctctccccc 132923 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 132916 tcttcctcctcctctccccc 132897 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 132869 tcttcctcctcctctccccc 132850 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 132843 tcttcctcctcctctccccc 132824
>gb|AC102658.9| Mus musculus chromosome 1, clone RP23-82B23, complete sequence Length = 186097 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 105354 ccctcctcttcctcctcctctccc 105377
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 238 ccaccctcgtcttcctcctcctctcccc 265 |||||||| |||||||||||| |||||| Sbjct: 20862 ccaccctcatcttcctcctcccctcccc 20889
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ccaccctcgtcttcctcctcctct 261 |||||||| ||||||||||||||| Sbjct: 161251 ccaccctcctcttcctcctcctct 161274
>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence Length = 165177 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aggcagcagctgccgcagcc 178 |||||||||||||||||||| Sbjct: 131838 aggcagcagctgccgcagcc 131857
>ref|XM_369172.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00072.4) partial mRNA Length = 3156 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 gcagcgtggcgcacctggcggcgg 315 |||||||||||| ||||||||||| Sbjct: 2213 gcagcgtggcgctcctggcggcgg 2190
>gb|BC007139.1| Mus musculus ribosomal protein L22, mRNA (cDNA clone MGC:6121 IMAGE:3487607), complete cds Length = 485 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 413 cctcgtcttcctcctcctct 394
>gb|BC029874.1| Homo sapiens protein inhibitor of activated STAT, 4, mRNA (cDNA clone MGC:35296 IMAGE:5176540), complete cds Length = 1835 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 1478 cctcgtcttcctcctcctct 1459
>gb|BC021344.1| Mus musculus ribosomal protein L22, mRNA (cDNA clone MGC:29121 IMAGE:4190569), complete cds Length = 2081 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 399 cctcgtcttcctcctcctct 380
>ref|XM_954367.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 313 cctcgtcttcctcctcctct 294
>ref|XM_592809.2| PREDICTED: Bos taurus similar to tripartite motif-containing 41 isform 1, transcript variant 1 (LOC540265), mRNA Length = 1522 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctcccc 265 ||||||| |||||||||||||||| Sbjct: 457 cctcgtcctcctcctcctctcccc 434
>ref|XM_876155.1| PREDICTED: Bos taurus similar to tripartite motif-containing 41 isform 1, transcript variant 5 (LOC540265), mRNA Length = 1485 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctcccc 265 ||||||| |||||||||||||||| Sbjct: 443 cctcgtcctcctcctcctctcccc 420
>ref|XM_876091.1| PREDICTED: Bos taurus similar to tripartite motif-containing 41 isform 1, transcript variant 4 (LOC540265), mRNA Length = 1485 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctcccc 265 ||||||| |||||||||||||||| Sbjct: 443 cctcgtcctcctcctcctctcccc 420
>ref|XM_865387.1| PREDICTED: Bos taurus similar to tripartite motif-containing 41 isform 1, transcript variant 2 (LOC540265), mRNA Length = 2869 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctcccc 265 ||||||| |||||||||||||||| Sbjct: 457 cctcgtcctcctcctcctctcccc 434
>gb|BC010047.2| Homo sapiens protein inhibitor of activated STAT, 4, mRNA (cDNA clone IMAGE:3831616), partial cds Length = 1736 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 1458 cctcgtcttcctcctcctct 1439
>gb|BC004389.1| Homo sapiens protein inhibitor of activated STAT, 4, mRNA (cDNA clone IMAGE:3621882), containing frame-shift errors Length = 1193 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 881 cctcgtcttcctcctcctct 862
>ref|XM_325756.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 313 cctcgtcttcctcctcctct 294
>ref|NM_009079.2| Mus musculus ribosomal protein L22 (Rpl22), mRNA Length = 2081 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 399 cctcgtcttcctcctcctct 380
>gb|DQ175838.1| Hordeum vulgare clone DsB41 Ds insertion site flanking region genomic sequence Length = 575 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 209 cctcgtcttcctcctcctct 228
>gb|BC066821.1| Mus musculus bobby sox homolog (Drosophila), mRNA (cDNA clone MGC:76579 IMAGE:30061364), complete cds Length = 4543 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 396 cctcgtcttcctcctcctct 377
>gb|AC144825.2| Danio rerio clone CH211-178A5, complete sequence Length = 53370 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 11529 gccaccctcctcttcctcctcctc 11506
>gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, complete sequence Length = 213381 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 170884 tcttcctcctcctctccccc 170903
>emb|BX323566.13| Zebrafish DNA sequence from clone DKEYP-67A8 in linkage group 2, complete sequence Length = 108226 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 91734 gccaccctcctcttcctcctcctc 91757
>emb|CR925737.7| Zebrafish DNA sequence from clone DKEY-263O8 in linkage group 10, complete sequence Length = 176107 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 7478 ccctcgtcttcctcctcctc 7459
>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6, complete sequence Length = 164483 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 146712 gccaccctcctcttcctcctcctc 146689
>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8, complete sequence Length = 195545 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 60536 gccaccctcctcttcctcctcctc 60513
>gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 142449 ccctcctcttcctcctcctctccc 142426
>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence Length = 233527 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 79823 ccctcctcttcctcctcctctccc 79800
>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete sequence Length = 175727 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 14218 cctcgtcttcctcctcctct 14237
>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence Length = 214405 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 15669 tcttcctcctcctctccccc 15650
>gb|AC126280.4| Mus musculus BAC clone RP23-10P23 from 16, complete sequence Length = 211237 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 138183 cctcgtcttcctcctcctct 138202
>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence Length = 179390 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 130442 cctcgtcttcctcctcctct 130461
>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence Length = 229072 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 52287 gccaccctcctcttcctcctcctc 52310
>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence Length = 224056 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 204173 tcttcctcctcctctccccc 204154
>gb|BC044014.1| Xenopus laevis SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1, mRNA (cDNA clone MGC:53976 IMAGE:5570983), complete cds Length = 3786 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 303 tcgtcttcctcctcctctcc 284
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 96464 ccctcttcttcctcctcctctccc 96441
>gb|AC096785.29| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence Length = 201304 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctcccc 265 |||| ||||||||||||||||||| Sbjct: 104854 cctcttcttcctcctcctctcccc 104877
>emb|CR684151.2|CNS0FQUB Tetraodon nigroviridis full-length cDNA Length = 1032 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggccctcgccaccctcgtcttcc 252 ||||||||||||| |||||||||| Sbjct: 370 tggccctcgccacgctcgtcttcc 393
>gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, complete sequence Length = 165789 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctcccc 265 |||| ||||||||||||||||||| Sbjct: 126194 cctcttcttcctcctcctctcccc 126171
>gb|AC078896.23| Mus musculus strain C57BL/6J clone rp23-329d14 map 6, complete sequence Length = 170323 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 112146 ccctcgtcttcctcctcctc 112165
>emb|BX927062.11| Zebrafish DNA sequence from clone CH211-227N20 in linkage group 13, complete sequence Length = 154186 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 48475 gccaccctcctcttcctcctcctc 48498
>gb|AC163899.3| Mus musculus chromosome 1, clone RP24-383F13, complete sequence Length = 227890 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 161379 ccctcctcttcctcctcctctccc 161402
>gb|AC163720.2| Mus musculus BAC clone RP23-424C5 from chromosome 16, complete sequence Length = 206284 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 178120 cctcgtcttcctcctcctct 178101
>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete sequence Length = 185609 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 127422 cctcgtcttcctcctcctct 127441
>emb|BX908804.17| Zebrafish DNA sequence from clone CH211-163M16 in linkage group 3, complete sequence Length = 162642 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 92180 gccaccctcctcttcctcctcctc 92157
>gb|AY353563.1| Anopheles gambiae relish mRNA, complete cds Length = 3753 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 3108 cctcgtcttcctcctcctct 3089
>ref|NM_015897.2| Homo sapiens protein inhibitor of activated STAT, 4 (PIAS4), mRNA Length = 1835 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 1478 cctcgtcttcctcctcctct 1459
>emb|AL603750.7| Human DNA sequence from clone RP11-33E12 on chromosome 1 Contains a novel gene (FLJ13815) and a CpG island, complete sequence Length = 63692 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 60533 tcgtcttcctcctcctctcc 60552
>ref|XM_502302.1| Yarrowia lipolytica CLIB122, YALI0D01892g predicted mRNA Length = 1545 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 560 tcgtcttcctcctcctctcc 541
>emb|AL390203.29| Human DNA sequence from clone RP11-462G8 on chromosome 10 Contains the 3' end of gene FLJ38950 and two novel genes, complete sequence Length = 150622 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 accaggcagcagctgccgcagccg 179 |||||||||||||||| ||||||| Sbjct: 138166 accaggcagcagctgcagcagccg 138143
>ref|XM_788427.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleoporin 153 (LOC588760), mRNA Length = 5100 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 2025 gccaccctcctcttcctcctcctc 2002
>gb|AF136171.1| Homo sapiens heparin-binding protein HBp15 mRNA, complete cds Length = 486 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 421 cctcgtcttcctcctcctct 402
>emb|AL009178.4|HS431P23 Human DNA sequence from clone RP3-431P23 on chromosome 6q27 Contains the 5' end of the MLLT4 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) translocated gene protein 4 (AF-6, Afadin, ALL-1 fusion partner), genes HGC6.4 and HGC6.2, a serine palmitoyltransferase long chain base subunit 2 (SPTLC2) (LCB2) pseudogene and two CpG islands, complete sequence Length = 147971 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 123942 gccaccctcctcttcctcctcctc 123965
>ref|XM_788246.1| PREDICTED: Strongylocentrotus purpuratus similar to forkhead box K1 (LOC588569), mRNA Length = 2117 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcagcagctgccgcagccgc 180 |||||||||||||||||||| Sbjct: 677 gcagcagctgccgcagccgc 658
>gb|AC129146.3| Rattus norvegicus 2 BAC CH230-266D19 (Children's Hospital Oakland Research Institute) complete sequence Length = 180291 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 7859 cctcgtcttcctcctcctct 7840
>gb|AC127971.3| Rattus norvegicus 2 BAC CH230-320E2 (Children's Hospital Oakland Research Institute) complete sequence Length = 141084 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 80689 cctcgtcttcctcctcctct 80708
>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8, complete sequence Length = 175706 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 66324 gccaccctcctcttcctcctcctc 66347
>emb|X72787.1|SGNUSG S.griseus nusG, rplKAJL gene cluster Length = 7235 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gaccggcggggccgggttcg 456 |||||||||||||||||||| Sbjct: 2534 gaccggcggggccgggttcg 2515
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 ccggtacgtgctgggcgagcagcg 205 ||||| |||||||||||||||||| Sbjct: 90281 ccggtgcgtgctgggcgagcagcg 90258
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 ccggtacgtgctgggcgagcagcg 205 ||||| |||||||||||||||||| Sbjct: 13324 ccggtgcgtgctgggcgagcagcg 13301
>emb|BX294139.1| Pirellula sp. strain 1 complete genome; segment 7/24 Length = 287650 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttggtcggcatggccctcgc 238 |||||||||||||||||||| Sbjct: 32438 ttggtcggcatggccctcgc 32457
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 433 tggtgaccggcggggccgggttcgtggg 460 ||||||||||||| ||||| |||||||| Sbjct: 199941 tggtgaccggcggagccggattcgtggg 199968
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ccggcgggcggcacgggcgg 395 |||||||||||||||||||| Sbjct: 291448 ccggcgggcggcacgggcgg 291467
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gcgggtgccgctggggctga 411 |||||||||||||||||||| Sbjct: 93702 gcgggtgccgctggggctga 93683
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 cacctggtggaacggctgctggcg 488 |||||||||||||| ||||||||| Sbjct: 168380 cacctggtggaacgcctgctggcg 168357
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gtggtgaccggcggggccgg 451 |||||||||||||||||||| Sbjct: 125838 gtggtgaccggcggggccgg 125819
>emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chromosome 11 Contains the gene for a novel protein (6230425C22Rik) similar to Homo sapiens CGI-48 protein, the 5' end of the Mbtd1 gene for mbt domain containing 1 and one CpG island, complete sequence Length = 126275 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctctcccc 265 |||| ||||||||||||||||||| Sbjct: 52486 cctcctcttcctcctcctctcccc 52463
>emb|AL603711.6| Mouse DNA sequence from clone RP23-381B19 on chromosome 11 Contains the 3' end of the Slfn3 gene for schlafen 3, a novel gene, two schlafen (Slfn) pseudogenes, the Pex12 gene for peroxisomal biogenesis factor 12 and the Ap2b1 gene for adaptor-related protein complex 2 beta 1 subunit, complete sequence Length = 204523 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 28497 cctcgtcttcctcctcctct 28478
>emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11, complete sequence Length = 127419 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 30972 tcgtcttcctcctcctctcc 30991
>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic acid oxidase, a novel gene (LOC327969), the 5' end of the Sez6 gene for seizure related gene 6 and two CpG islands, complete sequence Length = 220176 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 122002 tcttcctcctcctctccccc 121983
>emb|AL627444.10| Mouse DNA sequence from clone RP23-307A1 on chromosome 11 Contains the 5' end of the Gabrb2 gene for subunit beta 2 gamma-aminobutyric acid (GABA-A) receptor, complete sequence Length = 176814 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 66901 cctcgtcttcctcctcctct 66920
>emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chromosome 3 Contains a Saccharomyces cerevisiae Nip7p homolog (pEachy) homolog pseudogene, a tumor protein translationally-controlled 1 (Tpt1) pseudogene, a high mobility group box 2 (Hmgb2) pseudogene and the Cd2 gene for CD2 antigen, complete sequence Length = 169010 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 11785 tcttcctcctcctctccccc 11766
>ref|NM_153654.1| Danio rerio wu:ft92g05 (wu:ft92g05), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 1322 ccctcgtcttcctcctcctc 1303
>gb|AC124036.5| Mus Musculus Strain C57BL6/J chromosome 11 BAC Clone RP24-100D7, Complete Sequence, complete sequence Length = 228907 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 123844 cctcgtcttcctcctcctct 123863
>gb|AC040975.8| Homo sapiens chromosome 8, clone RP11-662B19, complete sequence Length = 199112 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 88478 ccctcgtcttcctcctcctc 88497
>dbj|AK022481.1| Homo sapiens cDNA FLJ12419 fis, clone MAMMA1003047, highly similar to Homo sapiens protein inhibitor of activated STAT protein PIASy mRNA Length = 3054 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 1479 cctcgtcttcctcctcctct 1460
>ref|NM_136520.1| Drosophila melanogaster CG14756-RA (CG14756), mRNA Length = 819 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 292 tcgtcttcctcctcctctcc 273
>dbj|AB183488.1| Oryzias latipes DNA, MHC class I region Length = 540982 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 172849 cctcgtcttcctcctcctct 172830
>gb|AC108930.3| Homo sapiens BAC clone RP11-204C12 from 4, complete sequence Length = 72790 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 63624 ccctcgtcttcctcctcctc 63643
>ref|NM_079016.3| Drosophila melanogaster Multi drug resistance 50 CG8523-RA (Mdr50), mRNA Length = 4256 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aggcagcagctgccgcagcc 178 |||||||||||||||||||| Sbjct: 1723 aggcagcagctgccgcagcc 1742
>dbj|AK143500.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860030L24 product:hypothetical protein, full insert sequence Length = 3713 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 1793 cctcgtcttcctcctcctct 1812
>gb|AC007844.32| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 6 clone ct7-541l22, complete sequence Length = 152316 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 28950 ccctcgtcttcctcctcctc 28969
>ref|XM_936457.1| PREDICTED: Homo sapiens synapse defective 1, Rho GTPase, homolog 2 (C. elegans) (SYDE2), mRNA Length = 4218 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 383 tcgtcttcctcctcctctcc 364
>ref|XM_086186.6| PREDICTED: Homo sapiens synapse defective 1, Rho GTPase, homolog 2 (C. elegans) (SYDE2), mRNA Length = 4218 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 383 tcgtcttcctcctcctctcc 364
>dbj|AK169731.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430014D04 product:ribosomal protein L22, full insert sequence Length = 2054 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 406 cctcgtcttcctcctcctct 387
>dbj|AK168353.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730098F13 product:ribosomal protein L22, full insert sequence Length = 458 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 404 cctcgtcttcctcctcctct 385
>dbj|AK169078.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920079D07 product:ribosomal protein L22, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 393 cctcgtcttcctcctcctct 374
>dbj|AB086818.1| Danio rerio prep2 mRNA for TALE homeodomain transcription factor Prep2, complete cds Length = 1425 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 1322 ccctcgtcttcctcctcctc 1303
>gb|AC027328.4| Homo sapiens chromosome 5 clone CTD-2136J7, complete sequence Length = 88303 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 26722 ccctcgtcttcctcctcctc 26741
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcagcagctgccgcagccgctcc 183 ||||||||| |||||||||||||| Sbjct: 266606 ggcagcagcagccgcagccgctcc 266583
>dbj|AK003022.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710007L22 product:ribosomal protein L22, full insert sequence Length = 460 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 406 cctcgtcttcctcctcctct 387
>dbj|AK009094.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310002H12 product:ribosomal protein L22, full insert sequence Length = 1999 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 407 cctcgtcttcctcctcctct 388
>gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, complete sequence Length = 180896 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 63641 tcgtcttcctcctcctctcc 63660
>gb|AC009597.5|AC009597 Homo sapiens chromosome 8, clone RP11-33E15, complete sequence Length = 169479 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 156490 ccctcgtcttcctcctcctc 156509
>ref|NM_061038.2| Caenorhabditis elegans Y71A12B.11 (Y71A12B.11) mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 684 cctcgtcttcctcctcctct 665
>gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, region 51E-51F, BAC clone BACR16C17, complete sequence Length = 180425 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aggcagcagctgccgcagcc 178 |||||||||||||||||||| Sbjct: 17637 aggcagcagctgccgcagcc 17656
>gb|BC096390.1| Mus musculus ribosomal protein L22, mRNA (cDNA clone MGC:106868 IMAGE:1179671), complete cds Length = 635 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 549 cctcgtcttcctcctcctct 530
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 3441677 tcgtcttcctcctcctctcc 3441696
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 864502 tcgtcttcctcctcctctcc 864521
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 22023307 ccctcgtcttcctcctcctc 22023326
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 caccctcgtcttcctcctcctctccccc 266 |||||||||||||||| ||| ||||||| Sbjct: 30621632 caccctcgtcttcctcttcccctccccc 30621659
>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186215 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 90535 tcttcctcctcctctccccc 90554
>dbj|AK222726.1| Homo sapiens mRNA for protein inhibitor of activated STAT, 4 variant, clone: COL08992 Length = 1708 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 1471 cctcgtcttcctcctcctct 1452
>ref|NM_213987.1| Sus scrofa heparin binding protein (HBP15/L22), mRNA Length = 461 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 404 cctcgtcttcctcctcctct 385
>gb|AE004601.1| Pseudomonas aeruginosa PAO1, section 162 of 529 of the complete genome Length = 15474 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcagcagctgccgcagccgctcc 183 ||||||||| |||||||||||||| Sbjct: 3953 ggcagcagcggccgcagccgctcc 3930
>ref|XM_228305.3| PREDICTED: Rattus norvegicus SEC63-like (S. cerevisiae) (predicted) (Sec63_predicted), mRNA Length = 2595 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 ccaccctcgtcttcctcctcctct 261 |||||||| ||||||||||||||| Sbjct: 2342 ccaccctcctcttcctcctcctct 2319
>ref|XM_221497.3| PREDICTED: Rattus norvegicus bobby sox homolog (Drosophila) (predicted) (Bbx_predicted), mRNA Length = 3241 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 164 cctcgtcttcctcctcctct 145
>gb|AC015916.13| Homo sapiens chromosome 17, clone CTD-2339F15, complete sequence Length = 102564 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 67808 ccctcctcttcctcctcctctccc 67785
>gb|AC127540.10| Homo sapiens chromosome 17, clone RP1-77H15, complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 138264 ccctcctcttcctcctcctctccc 138287
>gb|AC135105.11| Mus musculus strain C57BL/6J clone rp23-354f7, complete sequence Length = 209282 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 24689 ccctcgtcttcctcctcctc 24708
>gb|AC154223.1| Mus musculus BAC clone RP24-138G21 from chromosome 13, complete sequence Length = 153042 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 24656 ccctcttcttcctcctcctctccc 24679
>gb|AF164437.1|AF164437 Homo sapiens protein inhibitor of activated STAT mRNA, complete cds Length = 1506 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 1441 cctcgtcttcctcctcctct 1422
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 61180 ccctcgtcttcctcctcctc 61199
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 84327 tcttcctcctcctctccccc 84346
>gb|AC158683.2| Mus musculus 6 BAC RP23-328P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203488 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 107430 cctcgtcttcctcctcctct 107411
>dbj|AB111498.1| Chlamydomonas reinhardtii mRNA for tektin, complete cds Length = 2725 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 gtggcgcacctggcggcggt 316 |||||||||||||||||||| Sbjct: 1188 gtggcgcacctggcggcggt 1207
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 caccctcgtcttcctcctcctctccccc 266 |||||||||||||||| ||| ||||||| Sbjct: 133640 caccctcgtcttcctcttcccctccccc 133667
>emb|AL928805.18| Mouse DNA sequence from clone RP23-291H20 on chromosome 2, complete sequence Length = 192688 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 149214 tcgtcttcctcctcctctcc 149195
>gb|AC153918.4| Mus musculus BAC RP23-89M16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232574 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 97361 tcttcctcctcctctccccc 97342
>emb|AJ332868.1|HSA332868 Homo sapiens genomic sequence surrounding NotI site, clone NL6-DJ16R Length = 675 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ggcatggccctcgccaccct 244 |||||||||||||||||||| Sbjct: 173 ggcatggccctcgccaccct 192
>dbj|AK072757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142H17, full insert sequence Length = 1038 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgaggaggccggcgggcggc 387 |||||||||||||||||||| Sbjct: 317 cgaggaggccggcgggcggc 336
>gb|BT021362.1| Drosophila melanogaster LP14331 full insert cDNA Length = 4274 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aggcagcagctgccgcagcc 178 |||||||||||||||||||| Sbjct: 1723 aggcagcagctgccgcagcc 1742
>ref|NM_210019.1| Eremothecium gossypii AEL195Wp (AEL195W), mRNA Length = 714 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ggcagcagctgccgcagccgctcc 183 ||||||||| |||||||||||||| Sbjct: 260 ggcagcagcagccgcagccgctcc 237
>emb|AL132902.4|CEY71A12B Caenorhabditis elegans YAC Y71A12B, complete sequence Length = 137184 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 111296 cctcgtcttcctcctcctct 111277
>dbj|AK066267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059E13, full insert sequence Length = 2193 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 1920 tcgtcttcctcctcctctcc 1901
>gb|AC154671.2| Mus musculus BAC clone RP24-294I15 from 14, complete sequence Length = 146499 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 cctcgtcttcctcctcctctcccc 265 |||| ||||||||||||||||||| Sbjct: 120456 cctcttcttcctcctcctctcccc 120479
>gb|AY865574.1| Homo sapiens N-terminally extended type 3 canonical transient receptor potential channel mRNA, complete cds Length = 3548 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcgtcttcctcctcctc 260 |||||||||||||||||||| Sbjct: 151 ccctcgtcttcctcctcctc 132
>gb|AC133578.12| Mus musculus chromosome 15, clone RP23-212I23, complete sequence Length = 235230 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcttcctcctcctctccccc 266 |||||||||||||||||||| Sbjct: 104963 tcttcctcctcctctccccc 104944
>emb|BX005458.19| Zebrafish DNA sequence from clone CH211-173L10 in linkage group 18, complete sequence Length = 140289 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 62842 gccaccctcctcttcctcctcctc 62819
>emb|AL954312.16| Zebrafish DNA sequence from clone CH211-220P9 in linkage group 15, complete sequence Length = 231100 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 124139 gccaccctcctcttcctcctcctc 124116
>gb|AY880260.1| Acipenser transmontanus ribosomal protein L22-like mRNA, partial sequence Length = 387 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctcgtcttcctcctcctct 261 |||||||||||||||||||| Sbjct: 326 cctcgtcttcctcctcctct 307
>emb|CT010447.23| Mouse DNA sequence from clone RP23-15K11 on chromosome 13, complete sequence Length = 239180 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ccctcgtcttcctcctcctctccc 264 ||||| |||||||||||||||||| Sbjct: 90431 ccctcttcttcctcctcctctccc 90454
>emb|CT009703.8| Zebrafish DNA sequence from clone DKEYP-32B7 in linkage group 12, complete sequence Length = 129251 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gccaccctcgtcttcctcctcctc 260 ||||||||| |||||||||||||| Sbjct: 89307 gccaccctcctcttcctcctcctc 89284
>gb|AC008370.1|AC008370 Drosophila melanogaster, chromosome 2R, region 44B-44C, BAC clones BACR09N11 and BACR40A15, complete sequence Length = 132171 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcgtcttcctcctcctctcc 263 |||||||||||||||||||| Sbjct: 88090 tcgtcttcctcctcctctcc 88109 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,863,469 Number of Sequences: 3902068 Number of extensions: 3863469 Number of successful extensions: 161423 Number of sequences better than 10.0: 294 Number of HSP's better than 10.0 without gapping: 298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158289 Number of HSP's gapped (non-prelim): 3133 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)