ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33h08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-H09, full insert sequence Length = 851 Score = 278 bits (140), Expect = 2e-71 Identities = 248/284 (87%) Strand = Plus / Plus Query: 221 tggggtgtctgcgatgataacccggtccaagctggtggagcagctgcgcgactaccagat 280 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 144 tggggtatctgcgatgataacccggtcgaagctggttgagcagctgcgcgactaccagat 203 Query: 281 ccgatcccagcacaagcgcgacatcatcggagccatctcatggggcttgctgtgttgcct 340 ||||||||| |||||||| ||||| || ||||| ||||||||||||||||||||||| | Sbjct: 204 ccgatcccaacacaagcgtgacataattggagcagtctcatggggcttgctgtgttgctt 263 Query: 341 cctaatagtatcctcgtacatgatgctatacttcaggcacttctggttatcagccgtcat 400 || ||| |||| |||||||||| | | |||||||||||||||||| | || || || || Sbjct: 264 tctgataatatcatcgtacatgacgttgtacttcaggcacttctggctgtccgctgttat 323 Query: 401 catctccgtcggcatccttcttcccgccggcctgtatattttgaggcagagaaagctggc 460 ||||| |||| || |||||||| || ||||| || |||||||||||||||||||| || Sbjct: 324 tatctcactcggtattcttcttcctgctggcctttacattttgaggcagagaaagcttgc 383 Query: 461 taagaaaagagagcggagattattgttgcctctctccatgtaag 504 ||||||||||||| | ||||||||| |||| ||||||||||||| Sbjct: 384 taagaaaagagagagaagattattgctgcccctctccatgtaag 427
>dbj|AK073152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011D07, full insert sequence Length = 826 Score = 278 bits (140), Expect = 2e-71 Identities = 248/284 (87%) Strand = Plus / Plus Query: 221 tggggtgtctgcgatgataacccggtccaagctggtggagcagctgcgcgactaccagat 280 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 175 tggggtatctgcgatgataacccggtcgaagctggttgagcagctgcgcgactaccagat 234 Query: 281 ccgatcccagcacaagcgcgacatcatcggagccatctcatggggcttgctgtgttgcct 340 ||||||||| |||||||| ||||| || ||||| ||||||||||||||||||||||| | Sbjct: 235 ccgatcccaacacaagcgtgacataattggagcagtctcatggggcttgctgtgttgctt 294 Query: 341 cctaatagtatcctcgtacatgatgctatacttcaggcacttctggttatcagccgtcat 400 || ||| |||| |||||||||| | | |||||||||||||||||| | || || || || Sbjct: 295 tctgataatatcatcgtacatgacgttgtacttcaggcacttctggctgtccgctgttat 354 Query: 401 catctccgtcggcatccttcttcccgccggcctgtatattttgaggcagagaaagctggc 460 ||||| |||| || |||||||| || ||||| || |||||||||||||||||||| || Sbjct: 355 tatctcactcggtattcttcttcctgctggcctttacattttgaggcagagaaagcttgc 414 Query: 461 taagaaaagagagcggagattattgttgcctctctccatgtaag 504 ||||||||||||| | ||||||||| |||| ||||||||||||| Sbjct: 415 taagaaaagagagagaagattattgctgcccctctccatgtaag 458
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 316 tctcatggggcttgctgtgttgcctcctaatagtatcctcgtacatgatgctatacttca 375 ||||||||||||||||||||||| | || ||| |||| |||||||||| | | ||||||| Sbjct: 26130303 tctcatggggcttgctgtgttgctttctgataatatcatcgtacatgacgttgtacttca 26130362 Query: 376 ggcacttctggttatcagccgtcatcatctccgtcggcatccttcttcccgccggcctgt 435 ||||||||||| | || || || || ||||| |||| || |||||||| || ||||| | Sbjct: 26130363 ggcacttctggctgtccgctgttattatctcactcggtattcttcttcctgctggccttt 26130422 Query: 436 atattttgaggcagagaaagctggctaagaaaagagagcggagattattgttgcctctct 495 | |||||||||||||||||||| ||||||||||||||| | ||||||||| |||| |||| Sbjct: 26130423 acattttgaggcagagaaagcttgctaagaaaagagagagaagattattgctgcccctct 26130482 Query: 496 ccatgtaag 504 ||||||||| Sbjct: 26130483 ccatgtaag 26130491 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 221 tggggtgtctgcgatgataacccggtccaagctggtggagcagctgcgcgactaccagat 280 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 26129260 tggggtatctgcgatgataacccggtcgaagctggttgagcagctgcgcgactaccagat 26129319 Query: 281 ccgatcccagcacaag 296 ||||||||| |||||| Sbjct: 26129320 ccgatcccaacacaag 26129335
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Minus Query: 316 tctcatggggcttgctgtgttgcctcctaatagtatcctcgtacatgatgctatacttca 375 ||||||||||||||||||||||| | || ||| |||| |||||||||| | | ||||||| Sbjct: 26247 tctcatggggcttgctgtgttgctttctgataatatcatcgtacatgacgttgtacttca 26188 Query: 376 ggcacttctggttatcagccgtcatcatctccgtcggcatccttcttcccgccggcctgt 435 ||||||||||| | || || || || ||||| |||| || |||||||| || ||||| | Sbjct: 26187 ggcacttctggctgtccgctgttattatctcactcggtattcttcttcctgctggccttt 26128 Query: 436 atattttgaggcagagaaagctggctaagaaaagagagcggagattattgttgcctctct 495 | |||||||||||||||||||| ||||||||||||||| | ||||||||| |||| |||| Sbjct: 26127 acattttgaggcagagaaagcttgctaagaaaagagagagaagattattgctgcccctct 26068 Query: 496 ccatgtaag 504 ||||||||| Sbjct: 26067 ccatgtaag 26059 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Minus Query: 221 tggggtgtctgcgatgataacccggtccaagctggtggagcagctgcgcgactaccagat 280 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 27290 tggggtatctgcgatgataacccggtcgaagctggttgagcagctgcgcgactaccagat 27231 Query: 281 ccgatcccagcacaag 296 ||||||||| |||||| Sbjct: 27230 ccgatcccaacacaag 27215
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 316 tctcatggggcttgctgtgttgcctcctaatagtatcctcgtacatgatgctatacttca 375 ||||||||||||||||||||||| | || ||| |||| |||||||||| | | ||||||| Sbjct: 26221612 tctcatggggcttgctgtgttgctttctgataatatcatcgtacatgacgttgtacttca 26221671 Query: 376 ggcacttctggttatcagccgtcatcatctccgtcggcatccttcttcccgccggcctgt 435 ||||||||||| | || || || || ||||| |||| || |||||||| || ||||| | Sbjct: 26221672 ggcacttctggctgtccgctgttattatctcactcggtattcttcttcctgctggccttt 26221731 Query: 436 atattttgaggcagagaaagctggctaagaaaagagagcggagattattgttgcctctct 495 | |||||||||||||||||||| ||||||||||||||| | ||||||||| |||| |||| Sbjct: 26221732 acattttgaggcagagaaagcttgctaagaaaagagagagaagattattgctgcccctct 26221791 Query: 496 ccatgtaag 504 ||||||||| Sbjct: 26221792 ccatgtaag 26221800 Score = 119 bits (60), Expect = 1e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 221 tggggtgtctgcgatgataacccggtccaagctggtggagcagctgcgcgactaccagat 280 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 26220569 tggggtatctgcgatgataacccggtcgaagctggttgagcagctgcgcgactaccagat 26220628 Query: 281 ccgatcccagcacaag 296 ||||||||| |||||| Sbjct: 26220629 ccgatcccaacacaag 26220644
>gb|AY813601.1| Schistosoma japonicum SJCHGC05314 protein mRNA, complete cds Length = 995 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 65 ttttctcccctcttcttcttcttc 88 |||||||||||||||||||||||| Sbjct: 582 ttttctcccctcttcttcttcttc 559
>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence Length = 182955 Score = 44.1 bits (22), Expect = 0.48 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 24 ccctcgtcctcgtcg-cctcctcgtcctcttcct 56 ||||||||||||||| ||||||||||||| |||| Sbjct: 30703 ccctcgtcctcgtcgtcctcctcgtcctcgtcct 30670
>ref|NM_001005605.1| Mus musculus AE binding protein 2 (Aebp2), transcript variant 1, mRNA Length = 6192 Score = 44.1 bits (22), Expect = 0.48 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 24 ccctcgtcctcgtcg-cctcctcgtcctcttcct 56 ||||||||||||||| ||||||||||||| |||| Sbjct: 302 ccctcgtcctcgtcgtcctcctcgtcctcgtcct 269
>ref|NM_001035649.1| Arabidopsis thaliana DNA binding AT3G19184 mRNA, complete cds Length = 855 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 tcttcttcttcttccaagccc 95 ||||||||||||||||||||| Sbjct: 121 tcttcttcttcttccaagccc 141
>gb|AC159428.1| Trypanosoma brucei chromosome 8 clone RPCI93-28A12, complete sequence Length = 154096 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ttttctcccctcttcttcttcttcc 89 |||| |||||||||||||||||||| Sbjct: 136449 ttttttcccctcttcttcttcttcc 136473
>gb|AC008368.21| Trypanosoma brucei chromosome 2 clone RPCI93-1F7, complete sequence Length = 150968 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ttctcccctcttcttcttctt 87 ||||||||||||||||||||| Sbjct: 150687 ttctcccctcttcttcttctt 150707
>gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E18, complete sequence Length = 110159 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ttctcccctcttcttcttctt 87 ||||||||||||||||||||| Sbjct: 7696 ttctcccctcttcttcttctt 7716
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ttttctcccctcttcttcttcttcc 89 |||| |||||||||||||||||||| Sbjct: 2463543 ttttttcccctcttcttcttcttcc 2463567
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ttctcccctcttcttcttctt 87 ||||||||||||||||||||| Sbjct: 1091485 ttctcccctcttcttcttctt 1091505
>gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, complete sequence Length = 236163 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcccctcttcttcttcttcc 89 ||||||||||||||||||||| Sbjct: 122855 ctcccctcttcttcttcttcc 122835
>ref|XM_324294.1| Neurospora crassa OR74A hypothetical protein (NCU04938.1) partial mRNA Length = 2016 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 cctcttcttcttcttccaagc 93 ||||||||||||||||||||| Sbjct: 998 cctcttcttcttcttccaagc 1018
>ref|XM_954293.1| Neurospora crassa OR74A hypothetical protein (NCU04938.1) partial mRNA Length = 2016 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 cctcttcttcttcttccaagc 93 ||||||||||||||||||||| Sbjct: 998 cctcttcttcttcttccaagc 1018
>gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, complete sequence Length = 188948 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tctcccctcttcttcttcttc 88 ||||||||||||||||||||| Sbjct: 5029 tctcccctcttcttcttcttc 5049
>gb|AC147143.2| Pan troglodytes BAC clone CH251-267L18 from Y, complete sequence Length = 187629 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 36753 cttttctcccttcttcttcttcttc 36777
>gb|AC146243.2| Pan troglodytes BAC clone CH251-166E5 from Y, complete sequence Length = 161714 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 2564 cttttctcccttcttcttcttcttc 2540
>gb|AC147361.1| Pan troglodytes BAC clone CH251-528H6 from Y, complete sequence Length = 169760 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 161492 cttttctcccttcttcttcttcttc 161516
>gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, complete sequence Length = 229006 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 186568 cttttctcccttcttcttcttcttc 186592
>gb|AC147515.1| Pan troglodytes BAC clone CH251-558O8 from Y, complete sequence Length = 209207 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 167594 cttttctcccttcttcttcttcttc 167570
>gb|AC127252.3| Mus musculus BAC clone RP24-276A6 from chromosome 3, complete sequence Length = 173199 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttctt 84 ||||||||||||||||||||| Sbjct: 93147 cttttctcccctcttcttctt 93127
>ref|XM_811767.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511259.180) partial mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttcc 89 ||||||||||||||||||||| Sbjct: 834 ctcccctcttcttcttcttcc 854
>emb|CR956381.6| Pig DNA sequence from clone CH242-248C21 on chromosome 17, complete sequence Length = 58781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 gaggcagagaaagctggctaa 463 ||||||||||||||||||||| Sbjct: 38920 gaggcagagaaagctggctaa 38940
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 42.1 bits (21), Expect = 1.9 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 25 cctcgtcctcgtcg-cctcctcgtcctcttcct 56 |||||||||| ||| |||||||||||||||||| Sbjct: 122978 cctcgtcctcctcgtcctcctcgtcctcttcct 123010
>gb|BC034108.1| Mus musculus guanine nucleotide binding protein (G protein), gamma 7 subunit, transcript variant 1, mRNA (cDNA clone MGC:31559 IMAGE:4503666), complete cds Length = 3373 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 119 aagctggtggagcagctgcgc 139
>gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's Hospital Oakland Research Institute) complete sequence Length = 226532 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttcc 89 ||||||||||||||||||||| Sbjct: 132288 ctcccctcttcttcttcttcc 132308
>gb|AC091518.22| Mus musculus strain 129/SvJ clone mgs1-257j2 map 10, complete sequence Length = 124270 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 88633 aagctggtggagcagctgcgc 88653
>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3' end of a novel gene (4933412J03Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Tnfsf15 gene for tumor necrosis factor (ligand) superfamily member 15 and the 3' end of the Tnfsf8 for tumor necrosis factor (ligand) superfamily member 8, complete sequence Length = 212420 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 tctcccctcttcttcttcttc 88 ||||||||||||||||||||| Sbjct: 114297 tctcccctcttcttcttcttc 114277
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 agctggtggagcagctgcgcg 270 ||||||||||||||||||||| Sbjct: 87359 agctggtggagcagctgcgcg 87379
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 11371401 cttttctcccttcttcttcttcttc 11371377 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 11180652 cttttctcccttcttcttcttcttc 11180676 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 3472877 cttttctcccttcttcttcttcttc 3472853 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 3212394 cttttctcccttcttcttcttcttc 3212418
>gb|AY035844.1| Mus musculus G-protein gamma 7 mRNA, complete cds Length = 573 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 175 aagctggtggagcagctgcgc 195
>dbj|AK141541.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630015N05 product:guanine nucleotide binding protein (G protein), gamma 7 subunit, full insert sequence Length = 3329 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 164 aagctggtggagcagctgcgc 184
>dbj|AK147843.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270063O19 product:guanine nucleotide binding protein (G protein), gamma 7 subunit, full insert sequence Length = 3231 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 155 aagctggtggagcagctgcgc 175
>dbj|AK158963.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530020K16 product:guanine nucleotide binding protein (G protein), gamma 7 subunit, full insert sequence Length = 3420 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 255 aagctggtggagcagctgcgc 275
>gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 224257 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tctcccctcttcttcttcttc 88 ||||||||||||||||||||| Sbjct: 185803 tctcccctcttcttcttcttc 185823
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 tcttcttcttcttccaagcccaaat 99 |||||||||||||||| |||||||| Sbjct: 11192076 tcttcttcttcttccacgcccaaat 11192052 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 tttctcccctcttcttcttcttcc 89 |||||||||||||| ||||||||| Sbjct: 2959069 tttctcccctcttcctcttcttcc 2959092
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 ttccaagcccaaatcgggccaaacc 110 |||| |||||||||||||||||||| Sbjct: 5723888 ttcccagcccaaatcgggccaaacc 5723864
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 tctcccctcttcttcttcttc 88 ||||||||||||||||||||| Sbjct: 28965211 tctcccctcttcttcttcttc 28965191
>gb|AC146477.3| Pan troglodytes BAC clone CH251-514B8 from chromosome y, complete sequence Length = 170833 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 41643 cttttctcccttcttcttcttcttc 41667
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 ttccaagcccaaatcgggccaaacc 110 |||| |||||||||||||||||||| Sbjct: 30916 ttcccagcccaaatcgggccaaacc 30892
>gb|U38499.1|MMU38499 Mus musculus oocyte G protein gamma 7 subunit mRNA, partial cds Length = 126 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 7 aagctggtggagcagctgcgc 27
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 tctcccctcttcttcttcttc 88 ||||||||||||||||||||| Sbjct: 115255 tctcccctcttcttcttcttc 115235
>dbj|AP005541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B05 Length = 149754 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 tcttcttcttcttccaagcccaaat 99 |||||||||||||||| |||||||| Sbjct: 27094 tcttcttcttcttccacgcccaaat 27070
>dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVI11 Length = 81875 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 tcttcttcttcttccaagccc 95 ||||||||||||||||||||| Sbjct: 32776 tcttcttcttcttccaagccc 32796
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence Length = 106873 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 agctggtggagcagctgcgcg 270 ||||||||||||||||||||| Sbjct: 78242 agctggtggagcagctgcgcg 78262
>gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, complete sequence Length = 172721 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tctcccctcttcttcttcttc 88 ||||||||||||||||||||| Sbjct: 62757 tctcccctcttcttcttcttc 62777
>ref|NM_010319.3| Mus musculus guanine nucleotide binding protein (G protein), gamma 7 subunit (Gng7), transcript variant 2, mRNA Length = 3362 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 192 aagctggtggagcagctgcgc 212
>ref|NM_001038655.1| Mus musculus guanine nucleotide binding protein (G protein), gamma 7 subunit (Gng7), transcript variant 1, mRNA Length = 3425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 255 aagctggtggagcagctgcgc 275
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tcgcccagctcggcgatccgg 144 ||||||||||||||||||||| Sbjct: 1768678 tcgcccagctcggcgatccgg 1768698
>emb|CT009540.10| M.truncatula DNA sequence from clone MTH2-39B3 on chromosome 3, complete sequence Length = 127327 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttcttcttc 88 |||||||||| |||||||||||||| Sbjct: 118630 cttttctcccttcttcttcttcttc 118606
>gb|AC152500.7| Mus musculus BAC clone RP24-555P14 from chromosome 10, complete sequence Length = 170235 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 aagctggtggagcagctgcgc 269 ||||||||||||||||||||| Sbjct: 145368 aagctggtggagcagctgcgc 145388
>dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 kD), complete cds Length = 1953 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 ctcttcttcttcttccaagcc 94 ||||||||||||||||||||| Sbjct: 623 ctcttcttcttcttccaagcc 643
>emb|AL808146.3| Mouse DNA sequence from clone RP23-52L10 on chromosome X, complete sequence Length = 159820 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 cccagcacaagcgcgacatcatcgg 310 |||||||||||||| |||||||||| Sbjct: 120232 cccagcacaagcgctacatcatcgg 120208
>emb|AL772383.4| Mouse DNA sequence from clone RP23-22H5 on chromosome 4, complete sequence Length = 149147 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcccctcttcttcttcttcc 89 ||||||||||||||||||||| Sbjct: 99711 ctcccctcttcttcttcttcc 99691
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 86220 ctcccctcttcttcttcttc 86201
>ref|NM_130379.2| Arabidopsis thaliana PAC (PALE CRESS) AT2G48120 (PAC) mRNA, complete cds Length = 1277 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 |||||| ||||||||||||||||| Sbjct: 403 tttctctcctcttcttcttcttcc 380
>ref|NM_126029.2| Arabidopsis thaliana ATP binding / microtubule motor AT5G66310 mRNA, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 409 ctcccctcttcttcttcttc 428
>gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosome 17, complete sequence Length = 193418 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 caacccaaccaaccaacccc 26 |||||||||||||||||||| Sbjct: 10447 caacccaaccaaccaacccc 10428
>ref|XM_511954.1| PREDICTED: Pan troglodytes LOC455211 (LOC455211), mRNA Length = 9961 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caagctggtggagcagctgc 267 |||||||||||||||||||| Sbjct: 8193 caagctggtggagcagctgc 8212
>ref|XM_519493.1| PREDICTED: Pan troglodytes LOC463858 (LOC463858), mRNA Length = 1526 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 1081 tcgcctcctcttcctcttcctgca 1058
>ref|XM_464033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2468 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acttttctcccctcttcttc 82 |||||||||||||||||||| Sbjct: 1318 acttttctcccctcttcttc 1299
>ref|NM_191043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 387 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctcctcgtcctcttcct 56 |||||||||||||||||||| Sbjct: 34 cgcctcctcgtcctcttcct 53
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccctcttcttcttcttccaa 91 |||||||||||||||||||| Sbjct: 66993 ccctcttcttcttcttccaa 67012
>gb|AC117723.8| Mus musculus chromosome 1, clone RP24-232C21, complete sequence Length = 213190 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttcttctt 87 |||||||||| ||||||||||||| Sbjct: 149161 cttttctcccttcttcttcttctt 149138
>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 262323 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 ||||||||||||||||| |||||| Sbjct: 241396 tttctcccctcttcttcctcttcc 241373
>ref|NM_003302.2| Homo sapiens thyroid hormone receptor interactor 6 (TRIP6), mRNA Length = 1762 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 892 tcgcctcctcttcctcttcctgca 869
>gb|BC004249.1| Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:10556 IMAGE:3621877), complete cds Length = 1695 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 797 tcgcctcctcttcctcttcctgca 774
>gb|BC004999.1| Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:4423 IMAGE:2958142), complete cds Length = 1673 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 791 tcgcctcctcttcctcttcctgca 768
>gb|BC021540.1| Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:10558 IMAGE:3622017), complete cds Length = 1695 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 797 tcgcctcctcttcctcttcctgca 774
>ref|NM_020877.2| Homo sapiens dynein heavy chain domain 3 (DNHD3), mRNA Length = 13505 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caagctggtggagcagctgc 267 |||||||||||||||||||| Sbjct: 11735 caagctggtggagcagctgc 11754
>ref|XM_653429.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0917.2), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 tcatcatctccgtcggcatccttc 420 ||||||||||||||| |||||||| Sbjct: 191 tcatcatctccgtcgacatccttc 168
>gb|BC060338.1| Xenopus laevis hypothetical protein LOC398774, mRNA (cDNA clone IMAGE:4173253), partial cds Length = 2169 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctcttcttcttcttccaa 91 |||||||||||||||||||| Sbjct: 1573 ccctcttcttcttcttccaa 1554
>gb|BC028985.1| Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:29959 IMAGE:5122169), complete cds Length = 1678 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 804 tcgcctcctcttcctcttcctgca 781
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 20444 ctcccctcttcttcttcttc 20463
>ref|XM_804814.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510623.20) partial mRNA Length = 1092 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 1032 ctcccctcttcttcttcttc 1051
>gb|AC007950.7| Homo sapiens chromosome 15, clone RP11-44M14, complete sequence Length = 170979 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcccctcttcttcttcttcc 89 |||||||||||||||||||| Sbjct: 112985 tcccctcttcttcttcttcc 113004
>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete sequence Length = 194018 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 153173 ctcccctcttcttcttcttc 153192
>emb|Z93396.1|CEZC15 Caenorhabditis elegans Cosmid ZC15, complete sequence Length = 35875 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gcccaaatcgggccaaaccc 111 |||||||||||||||||||| Sbjct: 11637 gcccaaatcgggccaaaccc 11656
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 40609 ctcccctcttcttcttcttc 40628
>ref|XM_541425.2| PREDICTED: Canis familiaris similar to leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 6 (LOC484309), mRNA Length = 2150 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gcctcctcgtcctcttcctg 57 |||||||||||||||||||| Sbjct: 1428 gcctcctcgtcctcttcctg 1447
>gb|AC161032.19| Medicago truncatula clone mth2-21b7, complete sequence Length = 130355 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cctcctcgtcctcttcctgc 58 |||||||||||||||||||| Sbjct: 55066 cctcctcgtcctcttcctgc 55047
>gb|DQ278876.1| Gallus gallus Lin-41 mRNA, complete cds Length = 3080 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctcctcgtcctcttcct 56 |||||||||||||||||||| Sbjct: 977 cgcctcctcgtcctcttcct 996
>emb|AL512288.19| Human DNA sequence from clone RP11-460I13 on chromosome 1 Contains the gene for acid sphingomyelinase-like phosphodiesterase (ASML3B), the gene for a novel protein (FLJ10307), two novel genes, the 3' end of the EYA3 gene for eyes absent homolog 3 (Drosophila) and an interferon-induced transmembrane protein pseudogene, complete sequence Length = 113117 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 atggggcttgctgtgttgcc 339 |||||||||||||||||||| Sbjct: 71941 atggggcttgctgtgttgcc 71922
>emb|BX067478.1|CNS09O8A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51AG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 928 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctggtggagcagctgcgcg 270 |||||||||||||||||||| Sbjct: 353 gctggtggagcagctgcgcg 372
>emb|BX056002.1|CNS09FDI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 455 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctggtggagcagctgcgcg 270 |||||||||||||||||||| Sbjct: 369 gctggtggagcagctgcgcg 388
>ref|XM_779659.1| PREDICTED: Strongylocentrotus purpuratus similar to 1-beta dynein (LOC579549), mRNA Length = 1903 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caagctggtggagcagctgc 267 |||||||||||||||||||| Sbjct: 69 caagctggtggagcagctgc 88
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctggtggagcagctgcgcg 270 |||||||||||||||||||| Sbjct: 77467 gctggtggagcagctgcgcg 77486
>emb|AL670009.1|NC123A4 Neurospora crassa DNA linkage group V cosmid contig 123A4 Length = 153794 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tcttcttcttcttccaagcc 94 |||||||||||||||||||| Sbjct: 80413 tcttcttcttcttccaagcc 80432
>emb|CR615794.1| full-length cDNA clone CS0DI087YL04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1640 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 814 tcgcctcctcttcctcttcctgca 791
>gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosome 12, complete sequence Length = 187225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cttttctcccctcttcttct 83 |||||||||||||||||||| Sbjct: 121666 cttttctcccctcttcttct 121685
>gb|AC149043.3| Uncultured bacterium zdt-44a23 clone zdt-44a23, complete sequence Length = 35946 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 catgatgctatacttcaggc 378 |||||||||||||||||||| Sbjct: 13987 catgatgctatacttcaggc 13968
>emb|CR749505.1| Homo sapiens mRNA; cDNA DKFZp686J22257 (from clone DKFZp686J22257) Length = 2396 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 720 tcgcctcctcttcctcttcctgca 697
>dbj|AK128517.1| Homo sapiens cDNA FLJ46675 fis, clone TRACH3009701, weakly similar to Homo sapiens dynein, axonemal, heavy polypeptide 9 (DNAH9) Length = 3555 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caagctggtggagcagctgc 267 |||||||||||||||||||| Sbjct: 2568 caagctggtggagcagctgc 2587
>emb|CR624549.1| full-length cDNA clone CS0DI004YH16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1586 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 782 tcgcctcctcttcctcttcctgca 759
>emb|CR624193.1| full-length cDNA clone CS0DI029YH24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1618 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 796 tcgcctcctcttcctcttcctgca 773
>emb|CR621644.1| full-length cDNA clone CS0DI024YH17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1662 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 819 tcgcctcctcttcctcttcctgca 796
>emb|CR622523.1| full-length cDNA clone CS0DK002YL14 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1645 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 815 tcgcctcctcttcctcttcctgca 792
>emb|CR616514.1| full-length cDNA clone CS0DM010YH24 of Fetal liver of Homo sapiens (human) Length = 1655 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 819 tcgcctcctcttcctcttcctgca 796
>emb|CR615312.1| full-length cDNA clone CS0DK012YG16 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1611 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 782 tcgcctcctcttcctcttcctgca 759
>emb|CR614307.1| full-length cDNA clone CS0DI011YG10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1634 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 807 tcgcctcctcttcctcttcctgca 784
>emb|CR612634.1| full-length cDNA clone CS0DK002YB16 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1638 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 803 tcgcctcctcttcctcttcctgca 780
>emb|CR611447.1| full-length cDNA clone CS0DK003YG01 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1636 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 796 tcgcctcctcttcctcttcctgca 773
>emb|CR605367.1| full-length cDNA clone CS0DE007YI03 of Placenta of Homo sapiens (human) Length = 1653 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 806 tcgcctcctcttcctcttcctgca 783
>emb|CR605297.1| full-length cDNA clone CS0DK001YK10 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1661 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 832 tcgcctcctcttcctcttcctgca 809
>emb|CR600397.1| full-length cDNA clone CS0DJ005YB20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1484 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 657 tcgcctcctcttcctcttcctgca 634
>dbj|AK056773.1| Homo sapiens cDNA FLJ32211 fis, clone PLACE6003393, highly similar to THYROID RECEPTOR INTERACTING PROTEIN 6 Length = 1755 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 786 tcgcctcctcttcctcttcctgca 763
>emb|CR597445.1| full-length cDNA clone CS0DI057YG01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1636 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 801 tcgcctcctcttcctcttcctgca 778
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcccagctcggcgatccgg 144 |||||||||||||||||||| Sbjct: 3717283 cgcccagctcggcgatccgg 3717264
>gb|AF450138.1|AF450138S1 Mus musculus septin 9 (Sept9) gene, exon 1a Length = 2637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 catggggcttgctgtgttgc 338 |||||||||||||||||||| Sbjct: 1020 catggggcttgctgtgttgc 1039
>gb|AC008494.8| Homo sapiens chromosome 5 clone CTC-428G20, complete sequence Length = 181800 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ttctcccctcttcttcttct 86 |||||||||||||||||||| Sbjct: 167581 ttctcccctcttcttcttct 167562
>emb|AL928929.11| Zebrafish DNA sequence from clone CH211-218M9 in linkage group 20, complete sequence Length = 134154 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ctcttcttcttcttccaagc 93 |||||||||||||||||||| Sbjct: 8967 ctcttcttcttcttccaagc 8986
>gb|BC097629.1| Xenopus laevis hypothetical protein LOC398774, mRNA (cDNA clone MGC:114883 IMAGE:5512133), complete cds Length = 2154 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctcttcttcttcttccaa 91 |||||||||||||||||||| Sbjct: 1567 ccctcttcttcttcttccaa 1548
>gb|AC011895.4| Homo sapiens BAC clone RP11-126L15 from 7, complete sequence Length = 172358 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 110986 tcgcctcctcttcctcttcctgca 110963
>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 113205 ctcccctcttcttcttcttc 113224
>gb|AF452711.2| Gallus gallus alpha 1 type II procollagen (COL2A1) gene, exons 8 through 52 and partial cds Length = 12003 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cccctcttcttcttcttcca 90 |||||||||||||||||||| Sbjct: 3715 cccctcttcttcttcttcca 3734
>gb|AF372930.1|AF372930 Arabidopsis thaliana AT5g66310/K1L20_9 mRNA, partial cds Length = 1723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 409 ctcccctcttcttcttcttc 428
>gb|AC158666.3| Mus musculus 6 BAC RP23-11A20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188927 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 12046 ctcccctcttcttcttcttc 12027
>emb|BX323880.7| Zebrafish DNA sequence from clone CH211-139K8 in linkage group 2, complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctcttcttcttcttccaa 91 |||||||||||||||||||| Sbjct: 128969 ccctcttcttcttcttccaa 128950
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acttttctcccctcttcttc 82 |||||||||||||||||||| Sbjct: 1825222 acttttctcccctcttcttc 1825203
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctcctcgtcctcttcct 56 |||||||||||||||||||| Sbjct: 34469765 cgcctcctcgtcctcttcct 34469784
>dbj|AB040936.2| Homo sapiens mRNA for KIAA1503 protein, partial cds Length = 14955 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caagctggtggagcagctgc 267 |||||||||||||||||||| Sbjct: 13181 caagctggtggagcagctgc 13200
>gb|AF312032.1|AF312032 Homo sapiens acetylcholinesterase (ACHE) gene, partial cds; ASR2 (ASR2) gene, complete cds, alternatively spliced; thyroid receptor interacting protein 6 (TRIP6) gene, complete cds; cation-chloride cotransporter (CIP1) gene, complete cds, alternatively spliced; ephrin type-B receptor 4 precursor (EPHB4) and zonadhesin (ZAN) genes, complete cds; and unknown gene Length = 117962 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 22466 tcgcctcctcttcctcttcctgca 22489
>gb|AF234171.2|AF234171 Mus musculus STAT5B (Stat5b) gene, complete cds Length = 71512 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cctcttcttcttcttccaag 92 |||||||||||||||||||| Sbjct: 43095 cctcttcttcttcttccaag 43076
>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 195667 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cctcttcttcttcttccaag 92 |||||||||||||||||||| Sbjct: 153425 cctcttcttcttcttccaag 153406
>gb|AC016720.9| Homo sapiens BAC clone RP11-326G23 from 2, complete sequence Length = 154318 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcccctcttcttcttcttcc 89 |||||||||||||||||||| Sbjct: 120637 tcccctcttcttcttcttcc 120656
>gb|BT005304.1| Arabidopsis thaliana At2g48120 mRNA, complete cds Length = 942 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 |||||| ||||||||||||||||| Sbjct: 263 tttctctcctcttcttcttcttcc 240
>gb|AY086817.1| Arabidopsis thaliana clone 28047 mRNA, complete sequence Length = 1169 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 |||||| ||||||||||||||||| Sbjct: 340 tttctctcctcttcttcttcttcc 317
>gb|AC025335.25| Homo sapiens chromosome 17, clone RP11-404G1, complete sequence Length = 118684 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caagctggtggagcagctgc 267 |||||||||||||||||||| Sbjct: 104955 caagctggtggagcagctgc 104974
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctcctcgtcctcttcct 56 |||||||||||||||||||| Sbjct: 152109 cgcctcctcgtcctcttcct 152128
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete sequence. Sequence from clones T13E15, T14P1 Length = 87885 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccctcttcttcttcttccaa 91 |||||||||||||||||||| Sbjct: 72004 ccctcttcttcttcttccaa 72023
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctcctcgtcctcttcct 56 |||||||||||||||||||| Sbjct: 45484 cgcctcctcgtcctcttcct 45503
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acttttctcccctcttcttc 82 |||||||||||||||||||| Sbjct: 143234 acttttctcccctcttcttc 143215
>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete sequences Length = 207747 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 agaaagctggctaagaaaag 469 |||||||||||||||||||| Sbjct: 111226 agaaagctggctaagaaaag 111245
>emb|X15114.1|XLIGH Xenopus laevis mRNA for immunoglobulin heavy chain 26925 Length = 2072 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctcttcttcttcttccaa 91 |||||||||||||||||||| Sbjct: 1527 ccctcttcttcttcttccaa 1508
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 tttctcccctcttcttcttcttcc 89 |||||||||||||| ||||||||| Sbjct: 132131 tttctcccctcttcctcttcttcc 132154
>dbj|AB022211.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1L20 Length = 47665 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 27321 ctcccctcttcttcttcttc 27302
>dbj|AK117768.1| Arabidopsis thaliana At2g48120 mRNA for putative t9j23 pale cress protein, complete cds, clone: RAFL17-45-F17 Length = 1142 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 |||||| ||||||||||||||||| Sbjct: 313 tttctctcctcttcttcttcttcc 290
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acttttctcccctcttcttc 82 |||||||||||||||||||| Sbjct: 61866 acttttctcccctcttcttc 61847
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 tttctcccctcttcttcttcttcc 89 |||||||||||||| ||||||||| Sbjct: 9792 tttctcccctcttcctcttcttcc 9815
>emb|X96482.1|ATRNAPAC A.thaliana mRNA for PAC protein Length = 1126 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 |||||| ||||||||||||||||| Sbjct: 253 tttctctcctcttcttcttcttcc 230
>emb|X96480.1|ATDNAPAC A.thaliana pale cress gene Length = 2410 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 |||||| ||||||||||||||||| Sbjct: 995 tttctctcctcttcttcttcttcc 972
>ref|XM_310847.2| Anopheles gambiae str. PEST ENSANGP00000012374 (ENSANGG00000009885), partial mRNA Length = 4272 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctggtggagcagctgcgcg 270 |||||||||||||||||||| Sbjct: 3693 gctggtggagcagctgcgcg 3712
>gb|AC155945.4| Mus musculus 6 BAC RP24-466A6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162561 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 85422 ctcccctcttcttcttcttc 85441
>dbj|AK072394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P07, full insert sequence Length = 2469 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acttttctcccctcttcttc 82 |||||||||||||||||||| Sbjct: 1319 acttttctcccctcttcttc 1300
>gb|BC002680.2| Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:3837 IMAGE:3610413), complete cds Length = 1662 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 785 tcgcctcctcttcctcttcctgca 762
>gb|AC127373.3| Mus musculus BAC clone RP23-42M8 from 6, complete sequence Length = 233833 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 120215 ctcccctcttcttcttcttc 120196
>gb|AC140272.3| Mus musculus BAC clone RP23-332G6 from 8, complete sequence Length = 228667 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ttattacattgtagtggtag 525 |||||||||||||||||||| Sbjct: 73319 ttattacattgtagtggtag 73300
>emb|CT485616.11| Mouse DNA sequence from clone RP23-14H16 on chromosome 17, complete sequence Length = 163243 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 84934 ctcccctcttcttcttcttc 84953
>gb|AC113178.10| Mus musculus chromosome 15, clone RP23-395K11, complete sequence Length = 198803 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cctcttcttcttcttccaag 92 |||||||||||||||||||| Sbjct: 95210 cctcttcttcttcttccaag 95229
>gb|AF000974.1|HSAF000974 Human zyxin related protein ZRP-1 mRNA, complete cds Length = 1755 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 881 tcgcctcctcttcctcttcctgca 858
>gb|AF093834.1|HSZRP1 Homo sapiens zyxin-related protein 1 gene, exons 1 through 4 Length = 2069 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 1940 tcgcctcctcttcctcttcctgca 1917
>emb|AL808112.34| Mouse DNA sequence from clone RP23-57N22 on chromosome 4, complete sequence Length = 236158 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 196520 ctcccctcttcttcttcttc 196539
>gb|DQ117917.1| Gallus gallus LIN-41 (LIN-41) mRNA, partial cds Length = 4855 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcctcctcgtcctcttcct 56 |||||||||||||||||||| Sbjct: 72 cgcctcctcgtcctcttcct 91
>gb|AY948340.1| Crocus sativus APETALA3-like MADS box protein mRNA, complete cds Length = 896 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 5 ctcccctcttcttcttcttc 24
>emb|BX897722.15| Zebrafish DNA sequence from clone CH211-114K18 in linkage group 12, complete sequence Length = 84123 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ttttctcccctcttcttcttcttc 88 |||| ||||||||||||||||||| Sbjct: 31474 ttttttcccctcttcttcttcttc 31451
>gb|AF025437.1|AF025437 Homo sapiens Opa-interacting protein OIP1 mRNA, partial cds Length = 942 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 65 tcgcctcctcttcctcttcctgca 42
>dbj|AP007300.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29K22, TM0275, complete sequence Length = 104570 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctcttcttcttcttccaa 91 |||||||||||||||||||| Sbjct: 101026 ccctcttcttcttcttccaa 101007
>dbj|AP006639.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT25N16, TM0216, complete sequence Length = 95667 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cctcttcttcttcttccaag 92 |||||||||||||||||||| Sbjct: 35881 cctcttcttcttcttccaag 35900
>dbj|AP006632.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16I03, TM0056, complete sequence Length = 102883 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cctcttcttcttcttccaag 92 |||||||||||||||||||| Sbjct: 84011 cctcttcttcttcttccaag 84030
>dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT40O04, TM0348, complete sequence Length = 105070 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cctcttcttcttcttccaag 92 |||||||||||||||||||| Sbjct: 49903 cctcttcttcttcttccaag 49884
>gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome 17, complete sequence Length = 208318 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 caacccaaccaaccaacccc 26 |||||||||||||||||||| Sbjct: 147321 caacccaaccaaccaacccc 147302
>emb|AL662932.10| Mouse DNA sequence from clone RP23-15B7 on chromosome X, complete sequence Length = 218740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcccctcttcttcttcttc 88 |||||||||||||||||||| Sbjct: 8650 ctcccctcttcttcttcttc 8669
>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete sequence Length = 239847 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cctcttcttcttcttccaag 92 |||||||||||||||||||| Sbjct: 187741 cctcttcttcttcttccaag 187722
>emb|AL840633.8| Mouse DNA sequence from clone RP23-290E9 on chromosome 2, complete sequence Length = 103842 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cttttctcccctcttcttct 83 |||||||||||||||||||| Sbjct: 58810 cttttctcccctcttcttct 58791
>emb|AL603868.15| Mouse DNA sequence from clone RP23-101J23 on chromosome 11, complete sequence Length = 209068 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 catggggcttgctgtgttgc 338 |||||||||||||||||||| Sbjct: 55267 catggggcttgctgtgttgc 55286
>emb|Z69804.1|MMVIS15X1 M.musculus provirus integration site (isolate: tumor 15-1) Length = 436 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 catggggcttgctgtgttgc 338 |||||||||||||||||||| Sbjct: 116 catggggcttgctgtgttgc 135
>emb|AJ001902.1|HSTRIP6 Homo sapiens mRNA for TRIP6 (thyroid receptor interacting protein) Length = 1670 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tcgcctcctcgtcctcttcctgca 59 |||||||||| ||||||||||||| Sbjct: 794 tcgcctcctcttcctcttcctgca 771
>gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, complete sequence Length = 187685 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ttctcccctcttcttcttct 86 |||||||||||||||||||| Sbjct: 129058 ttctcccctcttcttcttct 129077
>gb|AC118274.9| Homo sapiens chromosome 15, clone RP11-265M18, complete sequence Length = 177432 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcccctcttcttcttcttcc 89 |||||||||||||||||||| Sbjct: 24875 tcccctcttcttcttcttcc 24894
>gb|L35241.1|ATHPAC3A Arabidopsis thaliana PAC3 mRNA, complete cds Length = 1200 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 tttctcccctcttcttcttcttcc 89 |||||| ||||||||||||||||| Sbjct: 403 tttctctcctcttcttcttcttcc 380 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,122,469 Number of Sequences: 3902068 Number of extensions: 5122469 Number of successful extensions: 732807 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 729338 Number of HSP's gapped (non-prelim): 3470 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
