ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33h07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D13153.1|WHTCYS1 Triticum aestivum mRNA for O-acetylserine (thiol) lyase Length = 1371 Score = 712 bits (359), Expect = 0.0 Identities = 432/455 (94%), Gaps = 1/455 (0%) Strand = Plus / Plus Query: 28 gcggccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcg 87 ||||||||||||||||||| ||||||||||||||||| | ||| |||| | ||||||||| Sbjct: 1 gcggccgccacttcgtccagctccagctccgggaggatcacttggctgtcgaatcgctcg 60 Query: 88 tcgggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctg 147 ||| |||||||||||||||||| || | ||||||||||||| |||||||||||||||| Sbjct: 61 tcga-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctg 119 Query: 148 atcgggaacacgccgctggtgtacctcaacaaggcgacggacgggtgcgtggggcgcgtc 207 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 120 atcgggaacacgccgttggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtc 179 Query: 208 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagc 267 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 180 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagc 239 Query: 268 atgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattgag 327 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 atgatcaccgacgcggaggagaaggggttcatcgtcccaggcaagagtgtgctgattgag 299 Query: 328 ccaaccaatggcaacacaggcattgggctggccttcatggctgctgccaagggttacaga 387 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 300 ccaaccagtggcaacacaggcattgggctggccttcatggctgctgcgaagggttacaga 359 Query: 388 cttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctttt 447 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 360 cttgtactcacaatgcccgcctccatgagtatggagaggagaatcatcttgaaggctttt 419 Query: 448 ggtgctgagctgatcctcacagacccactcttggg 482 |||||||||||||||||||| |||||||||||||| Sbjct: 420 ggtgctgagctgatcctcaccgacccactcttggg 454
>gb|BT009041.1| Triticum aestivum clone wdk5c.pk006.c9:fis, full insert mRNA sequence Length = 1355 Score = 690 bits (348), Expect = 0.0 Identities = 427/452 (94%), Gaps = 1/452 (0%) Strand = Plus / Plus Query: 31 gccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcgtcg 90 |||||||||||||||| |||| ||||| | |||| | |||||||| |||||||||||||| Sbjct: 7 gccgccacttcgtccagctccggctccagaaggatcacttcgctgtcaaatcgctcgtcg 66 Query: 91 ggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctgatc 150 |||||||||||||||||| || | ||||||||||||| ||||||||||||||||||| Sbjct: 67 a-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctgatc 125 Query: 151 gggaacacgccgctggtgtacctcaacaaggcgacggacgggtgcgtggggcgcgtcgcc 210 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 126 gggaacacgccgctggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtcgcc 185 Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagcatg 270 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 186 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagcatg 245 Query: 271 atcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattgagcca 330 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 246 atcaccgacgcggaggagaaggggttcatcgtcccaggcaagagtgtcctgattgagcca 305 Query: 331 accaatggcaacacaggcattgggctggccttcatggctgctgccaagggttacagactt 390 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 accagtggcaacacaggcattgggctggccttcatggctgctgccaagggttacagactt 365 Query: 391 gtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggcttttggt 450 |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 366 gtactcacaatgcccgcatccatgagtatggagaggagaatcatcttgaaggcttttggt 425 Query: 451 gctgagctgatcctcacagacccactcttggg 482 ||||||||| ||||||| |||||||||||||| Sbjct: 426 gctgagctggtcctcaccgacccactcttggg 457
>emb|AJ622893.1| Triticum durum partial mRNA for DRP6 protein (drg6 gene) Length = 466 Score = 541 bits (273), Expect = e-151 Identities = 303/313 (96%) Strand = Plus / Minus Query: 170 acctcaacaaggcgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 229 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 acctcaacaaggtgaccgacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 407 Query: 230 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggaga 289 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 406 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcggaggaga 347 Query: 290 aggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacacaggca 349 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 346 agaggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacacaggca 287 Query: 350 ttgggctggccttcatggctgctgccaagggttacagacttgtactcacgatgcccgcct 409 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 286 ttgggctggccttcatggctgctgcgaagggttacagacttgtactcacaatgcccgcct 227 Query: 410 ccatgagtatggagaggagaatcatcctgaaggcttttggtgctgagctgatcctcacag 469 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 226 ccatgagtacggagaggagaatcatcttgaaggcttttggtgctgagctgatcctcaccg 167 Query: 470 acccactcttggg 482 ||||||||||||| Sbjct: 166 acccactcttggg 154
>dbj|AK099598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045K17, full insert sequence Length = 1281 Score = 434 bits (219), Expect = e-118 Identities = 324/359 (90%) Strand = Plus / Plus Query: 124 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggcg 183 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| || | Sbjct: 92 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 151 Query: 184 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 243 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 152 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 211 Query: 244 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 303 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 212 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 271 Query: 304 ccaggcaagagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttc 363 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 272 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 331 Query: 364 atggctgctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggag 423 ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 332 atggctgctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggag 391 Query: 424 aggagaatcatcctgaaggcttttggtgctgagctgatcctcacagacccactcttggg 482 ||||||||||| ||||||||||||||||||| |||| || || |||||||||||||| Sbjct: 392 aggagaatcatattgaaggcttttggtgctgaattgatacttactgacccactcttggg 450
>dbj|AK061993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C03, full insert sequence Length = 1280 Score = 434 bits (219), Expect = e-118 Identities = 324/359 (90%) Strand = Plus / Plus Query: 124 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggcg 183 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| || | Sbjct: 91 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 150 Query: 184 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 243 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 151 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 210 Query: 244 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 303 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 211 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 270 Query: 304 ccaggcaagagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttc 363 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 271 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 330 Query: 364 atggctgctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggag 423 ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 331 atggctgctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggag 390 Query: 424 aggagaatcatcctgaaggcttttggtgctgagctgatcctcacagacccactcttggg 482 ||||||||||| ||||||||||||||||||| |||| || || |||||||||||||| Sbjct: 391 aggagaatcatattgaaggcttttggtgctgaattgatacttactgacccactcttggg 449
>gb|AF073695.1|AF073695 Oryza sativa cysteine synthase (rcs1) mRNA, complete cds Length = 1290 Score = 434 bits (219), Expect = e-118 Identities = 324/359 (90%) Strand = Plus / Plus Query: 124 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggcg 183 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| || | Sbjct: 86 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 145 Query: 184 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 243 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 146 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 205 Query: 244 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 303 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 206 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 265 Query: 304 ccaggcaagagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttc 363 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 266 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 325 Query: 364 atggctgctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggag 423 ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 326 atggctgctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggag 385 Query: 424 aggagaatcatcctgaaggcttttggtgctgagctgatcctcacagacccactcttggg 482 ||||||||||| ||||||||||||||||||| |||| || || |||||||||||||| Sbjct: 386 aggagaatcatattgaaggcttttggtgctgaattgatacttactgacccactcttggg 444
>gb|AY103651.1| Zea mays PCO145346 mRNA sequence Length = 1483 Score = 387 bits (195), Expect = e-104 Identities = 324/367 (88%) Strand = Plus / Plus Query: 116 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 175 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 234 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 293 Query: 176 acaaggcgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 235 |||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 294 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 353 Query: 236 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggt 295 |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 354 gctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaagggc 413 Query: 296 tcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacacaggcattgggc 355 | || |||||| |||||| |||||||| ||||| | ||||||||||||||||| | Sbjct: 414 tgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattggac 473 Query: 356 tggccttcatggctgctgccaagggttacagacttgtactcacgatgcccgcctccatga 415 ||||||| ||||||||||||||||| |||| |||| |||||| ||||| |||||||||| Sbjct: 474 tggcctttatggctgctgccaagggctacaaacttacactcacaatgcctgcctccatga 533 Query: 416 gtatggagaggagaatcatcctgaaggcttttggtgctgagctgatcctcacagacccac 475 | ||||||||||| ||||| ||||||||||||||||||| || |||| || ||||||| Sbjct: 534 gcatggagaggaggatcatattgaaggcttttggtgctgaacttgtccttactgacccac 593 Query: 476 tcttggg 482 ||||||| Sbjct: 594 tcttggg 600
>gb|BT016496.1| Zea mays clone Contig329 mRNA sequence Length = 1500 Score = 371 bits (187), Expect = 1e-99 Identities = 322/367 (87%) Strand = Plus / Plus Query: 116 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 175 ||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 231 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaatacgccgctggtgtacctca 290 Query: 176 acaaggcgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 235 |||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 291 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 350 Query: 236 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggt 295 |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 351 gctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaagggc 410 Query: 296 tcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacacaggcattgggc 355 | || |||||| |||||| |||||||| ||||| | ||||||||||||||||| | Sbjct: 411 tgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattggac 470 Query: 356 tggccttcatggctgctgccaagggttacagacttgtactcacgatgcccgcctccatga 415 ||||||| ||||||||||||||||| |||| |||| |||||| ||||| |||||||||| Sbjct: 471 tggcctttatggctgctgccaagggctacaaacttacactcacaatgcctgcctccatga 530 Query: 416 gtatggagaggagaatcatcctgaaggcttttggtgctgagctgatcctcacagacccac 475 | ||||||||||| ||||| ||||||||||||||||||| || |||| || ||||||| Sbjct: 531 gcatggagaggaggatcatattgaaggcttttggtgctgaacttgtccttactgacccac 590 Query: 476 tcttggg 482 || |||| Sbjct: 591 tcctggg 597
>emb|X85803.1|ZMCSOATL Z.mays mRNA for cysteine synthase Length = 1319 Score = 357 bits (180), Expect = 2e-95 Identities = 323/368 (87%), Gaps = 2/368 (0%) Strand = Plus / Plus Query: 116 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 175 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 86 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 145 Query: 176 acaaggcgacggacgggtgcgtggggcgc-gtcgccgccaagctcgagtccatggagccc 234 |||||| ||| || |||||||| || ||| ||||| |||||||||||||||||||||||| Sbjct: 146 acaaggtgaccgatgggtgcgtcggccgcagtcgc-gccaagctcgagtccatggagccc 204 Query: 235 tgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaagggg 294 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 205 tgctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaaggg 264 Query: 295 ttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacacaggcattggg 354 | || |||||| |||||| |||||||| ||||| | ||||||||||||||||| Sbjct: 265 ctgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattgga 324 Query: 355 ctggccttcatggctgctgccaagggttacagacttgtactcacgatgcccgcctccatg 414 |||||||| ||||||||||||||||| |||| |||| |||||| ||||| ||||||||| Sbjct: 325 ctggcctttatggctgctgccaagggctacaaacttacactcacaatgcctgcctccatg 384 Query: 415 agtatggagaggagaatcatcctgaaggcttttggtgctgagctgatcctcacagaccca 474 || ||||||||||| ||||| ||||||||||||||||||| || |||| || |||||| Sbjct: 385 agcatggagaggaggatcatattgaaggcttttggtgctgaacttgtccttactgaccca 444 Query: 475 ctcttggg 482 |||||||| Sbjct: 445 ctcttggg 452
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 230 bits (116), Expect = 3e-57 Identities = 158/172 (91%) Strand = Plus / Minus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 26734468 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 26734409 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 |||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 26734408 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 26734349 Query: 431 tcatcctgaaggcttttggtgctgagctgatcctcacagacccactcttggg 482 |||| ||||||||||||||||||| |||| || || |||||||||||||| Sbjct: 26734348 tcatattgaaggcttttggtgctgaattgatacttactgacccactcttggg 26734297 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 146 tgatcgggaacacgccgctggtgtacctcaacaaggcgacggacgggtgcgtggggcgcg 205 |||| |||||||||||| |||||||||||||| || |||||| |||||||| ||||||| Sbjct: 26736261 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26736202 Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 251 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26736201 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26736156 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 251 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 294 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 26735956 acaggattggatacagtatgatcactgatgcagaggagaagggg 26735913
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 230 bits (116), Expect = 3e-57 Identities = 158/172 (91%) Strand = Plus / Minus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 26662638 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 26662579 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 |||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 26662578 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 26662519 Query: 431 tcatcctgaaggcttttggtgctgagctgatcctcacagacccactcttggg 482 |||| ||||||||||||||||||| |||| || || |||||||||||||| Sbjct: 26662518 tcatattgaaggcttttggtgctgaattgatacttactgacccactcttggg 26662467 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 146 tgatcgggaacacgccgctggtgtacctcaacaaggcgacggacgggtgcgtggggcgcg 205 |||| |||||||||||| |||||||||||||| || |||||| |||||||| ||||||| Sbjct: 26664431 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26664372 Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 251 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26664371 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26664326 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 251 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 294 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 26664126 acaggattggatacagtatgatcactgatgcagaggagaagggg 26664083
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 230 bits (116), Expect = 3e-57 Identities = 158/172 (91%) Strand = Plus / Plus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 36656 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 36715 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 |||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 36716 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 36775 Query: 431 tcatcctgaaggcttttggtgctgagctgatcctcacagacccactcttggg 482 |||| ||||||||||||||||||| |||| || || |||||||||||||| Sbjct: 36776 tcatattgaaggcttttggtgctgaattgatacttactgacccactcttggg 36827 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 146 tgatcgggaacacgccgctggtgtacctcaacaaggcgacggacgggtgcgtggggcgcg 205 |||| |||||||||||| |||||||||||||| || |||||| |||||||| ||||||| Sbjct: 34863 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 34922 Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 251 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 34923 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 34968 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 251 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 294 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 35168 acaggattggatacagtatgatcactgatgcagaggagaagggg 35211
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 230 bits (116), Expect = 3e-57 Identities = 158/172 (91%) Strand = Plus / Plus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 64510 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 64569 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 |||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 64570 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 64629 Query: 431 tcatcctgaaggcttttggtgctgagctgatcctcacagacccactcttggg 482 |||| ||||||||||||||||||| |||| || || |||||||||||||| Sbjct: 64630 tcatattgaaggcttttggtgctgaattgatacttactgacccactcttggg 64681 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 146 tgatcgggaacacgccgctggtgtacctcaacaaggcgacggacgggtgcgtggggcgcg 205 |||| |||||||||||| |||||||||||||| || |||||| |||||||| ||||||| Sbjct: 62717 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 62776 Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 251 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 62777 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 62822 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 251 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 294 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 63022 acaggattggatacagtatgatcactgatgcagaggagaagggg 63065
>ref|XM_469737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1343 Score = 109 bits (55), Expect = 9e-21 Identities = 199/247 (80%) Strand = Plus / Plus Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 265 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 228 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 287 Query: 266 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 325 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||||| Sbjct: 288 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgattg 347 Query: 326 agccaaccaatggcaacacaggcattgggctggccttcatggctgctgccaagggttaca 385 |||| || | ||| || || || ||||| || || ||||||||||||||||||||||| | Sbjct: 348 agcctactagtggaaatactggtattggccttgctttcatggctgctgccaagggttata 407 Query: 386 gacttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctt 445 || | || || ||||| || |||||||| ||||| ||||| ||||| || ||||| | Sbjct: 408 agctaatcctgacaatgccagcatccatgagcatggaaaggaggatcattcttaaggcct 467 Query: 446 ttggtgc 452 | ||||| Sbjct: 468 tcggtgc 474
>gb|AF073697.1|AF073697 Oryza sativa cysteine synthase (rcs3) mRNA, complete cds Length = 1363 Score = 109 bits (55), Expect = 9e-21 Identities = 199/247 (80%) Strand = Plus / Plus Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 265 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 242 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 301 Query: 266 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 325 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||||| Sbjct: 302 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgattg 361 Query: 326 agccaaccaatggcaacacaggcattgggctggccttcatggctgctgccaagggttaca 385 |||| || | ||| || || || ||||| || || ||||||||||||||||||||||| | Sbjct: 362 agcctactagtggaaatactggtattggccttgctttcatggctgctgccaagggttata 421 Query: 386 gacttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctt 445 || | || || ||||| || |||||||| ||||| ||||| ||||| || ||||| | Sbjct: 422 agctaatcctgacaatgccagcatccatgagcatggaaaggaggatcattcttaaggcct 481 Query: 446 ttggtgc 452 | ||||| Sbjct: 482 tcggtgc 488
>dbj|AK071279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084C02, full insert sequence Length = 1337 Score = 101 bits (51), Expect = 2e-18 Identities = 198/247 (80%) Strand = Plus / Plus Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 265 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 217 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 276 Query: 266 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 325 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||| | Sbjct: 277 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgatcg 336 Query: 326 agccaaccaatggcaacacaggcattgggctggccttcatggctgctgccaagggttaca 385 |||| || | ||| || || || ||||| || || ||||||||||||||||||||||| | Sbjct: 337 agcctactagtggaaatactggtattggccttgctttcatggctgctgccaagggttata 396 Query: 386 gacttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctt 445 || | || || ||||| || |||||||| ||||| ||||| ||||| || ||||| | Sbjct: 397 agctaatcctgacaatgccagcatccatgagcatggaaaggaggatcattcttaaggcct 456 Query: 446 ttggtgc 452 | ||||| Sbjct: 457 tcggtgc 463
>gb|AY353092.1| Populus x canescens O-acetylserine (thiol)lyase mRNA, partial cds Length = 1192 Score = 87.7 bits (44), Expect = 3e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 303 ||||| |||||||||||||| || |||||||| || ||||||||||||||| | ||| Sbjct: 43 gtcaaagacaggattgggtatagtatgatcacagatgcagaggagaaggggcttatcaag 102 Query: 304 ccaggcaagagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttc 363 | || ||||||| ||||||||||| || | |||||| || ||||| |||||||| ||| Sbjct: 103 gcgggtgagagtgtcctgattgagcctacgagtggcaatactggcatagggctggcattc 162 Query: 364 atggctgctgccaagggttacaga 387 ||||| ||||| ||||| |||||| Sbjct: 163 atggcagctgctaagggctacaga 186
>emb|Y10847.1|BJY10847 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL6 Length = 1238 Score = 73.8 bits (37), Expect = 5e-10 Identities = 166/209 (79%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| ||||||||||||||||| ||||||||||| | ||||||||| | || |||||| Sbjct: 138 atggaaccctgctccagcgtcaaagacaggattggttttagcatgatctctgatgcagag 197 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 | ||||| | || ||||| |||||||| ||||||||||||| | ||| ||||| Sbjct: 198 aaaaagggtctgattaaaccaggagagagtgtgttgattgagccaacgagtggaaacacg 257 Query: 346 ggcattgggctggccttcatggctgctgccaagggttacagacttgtactcacgatgccc 405 || ||||| |||| |||| ||| ||||||||||| |||| ||| | | || ||||| Sbjct: 258 ggagttgggttggcattcacggcggctgccaagggctacaagcttattattaccatgcca 317 Query: 406 gcctccatgagtatggagaggagaatcat 434 || || |||||||| ||||| |||||||| Sbjct: 318 gcttcaatgagtattgagagaagaatcat 346
>gb|DQ336288.1| Vitis pseudoreticulata cysteine synthase mRNA, complete cds Length = 756 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 |||||||| ||||| || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 124 atggagccttgctctagtgtcaaggacaggatcgggtacagtatgatcacagatgcagaa 183 Query: 286 gagaaggg 293 |||||||| Sbjct: 184 gagaaggg 191
>emb|Y10845.1|BJY10845 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL4 Length = 1280 Score = 65.9 bits (33), Expect = 1e-07 Identities = 144/181 (79%) Strand = Plus / Plus Query: 205 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 264 ||||| || ||||||||| ||||| || |||||||| ||||| ||||||||||| | Sbjct: 167 gtcgctgctaagctcgagatgatggaaccttgctccagtgtcaaagacaggattggtttt 226 Query: 265 agcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgatt 324 ||||||||| | || |||||| | ||||| | ||| ||||| |||||||||||||| Sbjct: 227 agcatgatctctgatgcagagcaaaagggtctgatcaaaccaggagagagtgtgctgatt 286 Query: 325 gagccaaccaatggcaacacaggcattgggctggccttcatggctgctgccaagggttac 384 |||||||| | ||| ||||| || ||||| | || |||| ||| ||||||||||| ||| Sbjct: 287 gagccaacgagtggaaacaccggagttgggttagcgttcacggcggctgccaaggggtac 346 Query: 385 a 385 | Sbjct: 347 a 347
>gb|AY112530.1| Zea mays CL5251_1 mRNA sequence Length = 1258 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 205 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 264 ||||| || ||||||||| ||||||||||||| ||||||||||||||||| |||||| Sbjct: 88 gtcgctgctaagctcgagattatggagccctgctgtagcgtcaaggacaggatagggtac 147 Query: 265 agcatgatcaccgacgc 281 || ||||| | |||||| Sbjct: 148 agtatgataaacgacgc 164
>gb|AF452451.1| Glycine max cysteine synthase mRNA, complete cds Length = 1267 Score = 63.9 bits (32), Expect = 5e-07 Identities = 128/160 (80%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 |||||||| ||||| || || ||||||||||||||||| || ||||| | || ||||| Sbjct: 205 atggagccatgctctagtgtgaaggacaggattgggtatagtatgattgctgatgcagaa 264 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 |||||||| | ||| || || |||||||| || ||||||||||| | ||| || || Sbjct: 265 gagaagggacttatcacacctggaaagagtgtcctcattgagccaacaagtggtaatact 324 Query: 346 ggcattgggctggccttcatggctgctgccaagggttaca 385 |||||||| | ||||||||||| || |||| |||||||| Sbjct: 325 ggcattggattagccttcatggcagcagccaggggttaca 364
>gb|AF078693.1|AF078693 Chlamydomonas reinhardtii putative O-acetylserine(thiol)lyase precursor (Crcys-1A) mRNA, nuclear gene encoding organellar protein, complete cds Length = 1492 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 265 ||||||||||||| ||| |||||||||||||| | ||| ||||||||||| || |||| Sbjct: 251 tcgccgccaagctggagatcatggagccctgctgctccgttaaggacaggatcggctaca 310 Query: 266 gcatgatc 273 |||||||| Sbjct: 311 gcatgatc 318
>emb|AJ580401.1|AHA580401 Arabidopsis halleri subsp. halleri partial mRNA for putative o-acetylserine thiol lyase (oasa1 gene) Length = 916 Score = 58.0 bits (29), Expect = 3e-05 Identities = 164/209 (78%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| || ||||| ||||| || ||||||||||| | ||||||||| | || ||||| Sbjct: 65 atggaaccatgctctagcgttaaagacaggattggtttcagcatgatttctgatgcagaa 124 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 ||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 125 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacacc 184 Query: 346 ggcattgggctggccttcatggctgctgccaagggttacagacttgtactcacgatgccc 405 || ||||| | || |||| ||| ||||||||||| |||| ||| | | || ||||| Sbjct: 185 ggagttgggttagcattcacggcagctgccaagggctacaagcttattattaccatgcca 244 Query: 406 gcctccatgagtatggagaggagaatcat 434 || || |||||||| ||||| |||||||| Sbjct: 245 gcttcgatgagtattgagagaagaatcat 273
>emb|BX827385.1|CNS0A2GK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS48ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 179 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 238 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 |||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 239 gagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacact 298 Query: 346 ggcattgggctggccttcatggctgctgccaa 377 || ||||| | || |||| ||| |||||||| Sbjct: 299 ggagttgggttagcattcacggcagctgccaa 330
>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds Length = 1671 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 |||||||| || || || || |||||||||||||||||||||||||| || || |||||| Sbjct: 540 atggagccttgttctagtgttaaggacaggattgggtacagcatgattactgaggcagag 599
>dbj|D28777.1|CNAPCCS7 Citrullus vulgaris mRNA for cysteine synthase, complete cds Length = 1855 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 356 tggccttcatggctgctgccaagggttacagactt 390 |||||||||| ||||||||||||||||| |||||| Sbjct: 817 tggccttcattgctgctgccaagggttatagactt 851
>gb|BT014392.1| Lycopersicon esculentum clone 133697R, mRNA sequence Length = 1384 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 323 ttgagccaaccaatggcaacacaggcattgggctggccttcatggctgct 372 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 432 ttgagcctacgagtggaaacacaggcattgggcttgccttcattgctgct 481
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Plus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 30469031 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 30469090 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 ||||||||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 30469091 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 30469150 Query: 431 tcatcctgaaggcttttggtgc 452 |||| || ||||| || ||||| Sbjct: 30469151 tcattcttaaggccttcggtgc 30469172 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 251 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30468420 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30468465
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 251 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 8595 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 8550 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Minus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 7984 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 7925 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 ||||||||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 7924 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 7865 Query: 431 tcatcctgaaggcttttggtgc 452 |||| || ||||| || ||||| Sbjct: 7864 tcattcttaaggccttcggtgc 7843
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Plus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 604 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 663 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 ||||||||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 664 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 723 Query: 431 tcatcctgaaggcttttggtgc 452 |||| || ||||| || ||||| Sbjct: 724 tcattcttaaggccttcggtgc 745 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 225 catggagccctgctccagcgtcaagga 251 |||||||||||||||||| |||||||| Sbjct: 12 catggagccctgctccagtgtcaagga 38
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Plus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 30560453 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 30560512 Query: 371 ctgccaagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 430 ||||||||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 30560513 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 30560572 Query: 431 tcatcctgaaggcttttggtgc 452 |||| || ||||| || ||||| Sbjct: 30560573 tcattcttaaggccttcggtgc 30560594 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 206 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 251 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30559842 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30559887
>dbj|AB029513.2| Solanum tuberosum PCS-2-2 mRNA for plastidic cysteine synthase 2, complete cds Length = 1375 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 323 ttgagccaaccaatggcaacacaggcattgggctggccttcatggctgct 372 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 458 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 507
>dbj|AB029512.2| Solanum tuberosum PCS-2-1 mRNA for plastidic cysteine synthase 1, complete cds Length = 1378 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 323 ttgagccaaccaatggcaacacaggcattgggctggccttcatggctgct 372 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 458 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 507
>gb|AF044173.1|AF044173 Solanum tuberosum cysteine synthase mRNA, nuclear gene encoding plastid protein, complete cds Length = 1404 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 323 ttgagccaaccaatggcaacacaggcattgggctggccttcatggctgct 372 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 424 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 473
>emb|AM087457.1| Nicotiana tabacum partial mRNA for putative chloroplast cysteine synthase 1 precursor (oas1 gene) Length = 1271 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 340 aacacaggcattgggctggccttcatggctgct 372 ||||||||||||||||| |||||||| |||||| Sbjct: 355 aacacaggcattgggcttgccttcattgctgct 387 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgat 272 |||||||| |||| ||| |||||||||||||| |||| ||| ||||| Sbjct: 241 atggagccatgctgcagtgtcaaggacaggatagggttcagtatgat 287
>gb|AY325893.1| Porphyra purpurea cysteine synthase (CS) mRNA, complete cds Length = 1466 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctc 239 ||||||||||||||||||||||| ||||| Sbjct: 422 gccaagctcgagtccatggagccgtgctc 450
>ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.2 mRNA, complete cds Length = 1553 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.3 mRNA, complete cds Length = 1558 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.1 mRNA, complete cds Length = 1544 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_117574.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.1 mRNA, complete cds Length = 1365 Score = 48.1 bits (24), Expect = 0.027 Identities = 120/152 (78%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 266 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 325 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 ||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 326 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacact 385 Query: 346 ggcattgggctggccttcatggctgctgccaa 377 || ||||| | || |||| ||| |||||||| Sbjct: 386 ggagttgggttagcattcacggcagctgccaa 417
>ref|NM_179055.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.2 mRNA, complete cds Length = 1314 Score = 48.1 bits (24), Expect = 0.027 Identities = 120/152 (78%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 211 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 270 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 ||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 271 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacact 330 Query: 346 ggcattgggctggccttcatggctgctgccaa 377 || ||||| | || |||| ||| |||||||| Sbjct: 331 ggagttgggttagcattcacggcagctgccaa 362
>ref|NM_189518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Plus Query: 205 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 264 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 301 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 360 Query: 265 agcatgat 272 || ||||| Sbjct: 361 agtatgat 368
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 cagcagcggccgccacttcgtcca 46 |||||||||||||||||||||||| Sbjct: 1430058 cagcagcggccgccacttcgtcca 1430081
>emb|X84097.1|ATCYS3A A.thaliana mRNA for cysteine synthase Length = 1332 Score = 48.1 bits (24), Expect = 0.027 Identities = 120/152 (78%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 213 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 272 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 ||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 273 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacact 332 Query: 346 ggcattgggctggccttcatggctgctgccaa 377 || ||||| | || |||| ||| |||||||| Sbjct: 333 ggagttgggttagcattcacggcagctgccaa 364
>emb|X81973.1|ATCSMRNA A.thaliana mRNA for cysteine synthase Length = 1564 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 454 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 509
>emb|X80376.2|ATOACLY Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.5-8) Length = 1253 Score = 48.1 bits (24), Expect = 0.027 Identities = 120/152 (78%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 176 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 235 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 ||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 236 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacact 295 Query: 346 ggcattgggctggccttcatggctgctgccaa 377 || ||||| | || |||| ||| |||||||| Sbjct: 296 ggagttgggttagcattcacggcagctgccaa 327
>emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thiol) lyase Length = 1432 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 225 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 272 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 353 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 400 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 400 atgcccgcctccatgagtatggagaggagaatcatcctgaaggcttttggtgctgag 456 ||||| || |||||||||||||| |||||| | ||| |||| || ||||| |||||| Sbjct: 528 atgccagcttccatgagtatggaaaggagagttatcttgaaagcatttggagctgag 584
>gb|AY045825.1| Arabidopsis thaliana putative cytosolic O-acetylserine(thiol)lyase (At4g14880) mRNA, complete cds Length = 1254 Score = 48.1 bits (24), Expect = 0.027 Identities = 120/152 (78%) Strand = Plus / Plus Query: 226 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 285 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 189 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 248 Query: 286 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccaatggcaacaca 345 ||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 249 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacact 308 Query: 346 ggcattgggctggccttcatggctgctgccaa 377 || ||||| | || |||| ||| |||||||| Sbjct: 309 ggagttgggttagcattcacggcagctgccaa 340
>emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O-acetylserine (thiol) lyase (oasC gene) Length = 1377 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 295 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 350
>gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1460 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 424 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 479
>gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1556 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 494 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 549
>emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1500 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 211 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 266 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 462 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 517
>dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D03, full insert sequence Length = 1555 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Plus Query: 205 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 264 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 353 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 412 Query: 265 agcatgat 272 || ||||| Sbjct: 413 agtatgat 420
>dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079H24, full insert sequence Length = 1562 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Plus Query: 205 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 264 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 364 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 423 Query: 265 agcatgat 272 || ||||| Sbjct: 424 agtatgat 431
>dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035B06, full insert sequence Length = 2104 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Plus Query: 205 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 264 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 895 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 954 Query: 265 agcatgat 272 || ||||| Sbjct: 955 agtatgat 962
>dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E19, full insert sequence Length = 1602 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Plus Query: 205 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 264 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 401 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 460 Query: 265 agcatgat 272 || ||||| Sbjct: 461 agtatgat 468
>gb|AY107771.1| Zea mays PCO121395 mRNA sequence Length = 1573 Score = 48.1 bits (24), Expect = 0.027 Identities = 90/112 (80%) Strand = Plus / Plus Query: 143 agctgatcgggaacacgccgctggtgtacctcaacaaggcgacggacgggtgcgtggggc 202 |||||||||||| || ||| |||||||||| ||||||| ||| || ||||||| | | Sbjct: 374 agctgatcgggaggaccccgatggtgtacctgaacaaggtgaccgaggggtgcggcgccc 433 Query: 203 gcgtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacag 254 | || || ||||||||||||| | || |||| | || ||||||||| ||||| Sbjct: 434 gggtggctgccaagctcgagttcctgcagccgtccttcagcgtcaaagacag 485
>dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cysteine synthase, complete cds Length = 1484 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 225 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 272 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 361 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 408 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 400 atgcccgcctccatgagtatggagaggagaatcatcctgaaggcttttggtgctgag 456 ||||| || |||||||||||||| |||||| | ||| |||| || ||||| |||||| Sbjct: 536 atgccagcttccatgagtatggaaaggagagttatcttgaaagcatttggagctgag 592
>gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine-(thiol)-lyase mRNA, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 225 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 272 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 342 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 389
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Minus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 |||||||||||||||||||||| | ||| ||||| || ||||| | || |||| ||| | Sbjct: 84663 agagtgtgctgattgagccaacaagtggaaacactggagttgggttagcattcacggcag 84604 Query: 371 ctgccaa 377 ||||||| Sbjct: 84603 ctgccaa 84597
>emb|BX842650.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 5/11 Length = 349723 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 337 ggcaacacaggcattgggctggccttcatggctgctgccaagggtta 383 |||||||||||||||| |||||| || |||| |||||||| ||||| Sbjct: 252326 ggcaacacaggcattgcgctggcttttgtggccgctgccaaaggtta 252372
>emb|AJ272027.1|ATH272027 Arabidopsis thaliana oasA1 gene for O-acetylserine (thiol) lyase A1, exons 1-11 Length = 5340 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 |||||||||||||||||||||| | ||| ||||| || ||||| | || |||| ||| | Sbjct: 2603 agagtgtgctgattgagccaacaagtggaaacactggagttgggttagcattcacggcag 2662 Query: 371 ctgccaa 377 ||||||| Sbjct: 2663 ctgccaa 2669
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Minus Query: 311 agagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggctg 370 |||||||||||||||||||||| | ||| ||||| || ||||| | || |||| ||| | Sbjct: 30117 agagtgtgctgattgagccaacaagtggaaacactggagttgggttagcattcacggcag 30058 Query: 371 ctgccaa 377 ||||||| Sbjct: 30057 ctgccaa 30051
>gb|AY766094.1| Allium sativum cysteine synthase GCS3 (gcs3) mRNA, complete cds Length = 1296 Score = 44.1 bits (22), Expect = 0.43 Identities = 55/66 (83%) Strand = Plus / Plus Query: 225 catggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcaga 284 |||||||||||| || || ||||| || ||||||| || |||||||||| || ||||| Sbjct: 241 catggagccctgttctagtgtcaaagataggattgcgttgagcatgatcaatgatgcaga 300 Query: 285 ggagaa 290 |||||| Sbjct: 301 ggagaa 306
>ref|XM_416752.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC418545), mRNA Length = 1751 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 gagccaaccaatggcaacacaggcattgggctggcctt 362 ||||||||| ||| |||||||| |||||||||||||| Sbjct: 522 gagccaacctctggaaacacaggaattgggctggcctt 559
>emb|X81697.1|ATCYTACS1 A.thaliana cytACS1 mRNA for cysteine synthase Length = 1278 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 311 agagtgtgctgattgagccaac 332 |||||||||||||||||||||| Sbjct: 295 agagtgtgctgattgagccaac 316
>emb|X64874.1|CACYSSYNM C.annuum mRNA for cysteine synthase Length = 1313 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Plus Query: 323 ttgagccaaccaatggcaacacaggcattgggctggccttcatggctgct 372 ||||||| || | ||| |||||||||||||| || |||||||| |||||| Sbjct: 399 ttgagcctacgagtggaaacacaggcattggtcttgccttcattgctgct 448
>emb|CR353850.1| Gallus gallus finished cDNA, clone ChEST821g21 Length = 780 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 gagccaaccaatggcaacacaggcattgggctggcctt 362 ||||||||| ||| |||||||| |||||||||||||| Sbjct: 565 gagccaacctctggaaacacaggaattgggctggcctt 602
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 331 accaatggcaacacaggcattgggctggcc 360 |||| ||||||||| ||||||||||||||| Sbjct: 3689562 accagtggcaacaccggcattgggctggcc 3689591 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cggcgatcgccagggatgtcaccg 142 ||||||||||||| |||||||||| Sbjct: 2981330 cggcgatcgccagcgatgtcaccg 2981353
>dbj|AB031003.1| Cyanidioschyzon merolae cmOASTL1 gene for O-acetylserine (thiol) lyase 1, complete cds Length = 1170 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 214 aagctcgagtccatggagccctgctc 239 ||||| |||||||||||||||||||| Sbjct: 295 aagctggagtccatggagccctgctc 320
>ref|NM_129937.2| Arabidopsis thaliana OASB (CYSTEINE SYNTHASE 1); cysteine synthase AT2G43750 (OASB) mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgat 272 |||||||| |||||||||||||| ||||| Sbjct: 573 gtcaaggataggattgggtacagtatgat 601
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 gctgatcgggaacacgccgct 164 ||||||||||||||||||||| Sbjct: 1836671 gctgatcgggaacacgccgct 1836651
>gb|BT014000.1| Lycopersicon esculentum clone 133047R, mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 1.7 Identities = 57/69 (82%) Strand = Plus / Plus Query: 225 catggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcaga 284 ||||||||| ||||| || || ||||| |||||||| || || ||||| || || || || Sbjct: 181 catggagccatgctctagtgttaaggataggattggttatagtatgattacagatgctga 240 Query: 285 ggagaaggg 293 ||||||||| Sbjct: 241 ggagaaggg 249
>emb|AM087458.1| Nicotiana tabacum mRNA for putative cytosolic cysteine synthase 7 (oas7 gene) Length = 1256 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Plus Query: 202 cgcgtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggg 261 ||||| || ||||||||||| ||||||||| ||||| || || ||||| |||||||| Sbjct: 154 cgcgttgctgccaagctcgaaagcatggagccgtgctctagtgttaaggataggattggt 213 Query: 262 tacagcatgatcaccgacgcagaggagaa 290 || || ||||| || || || |||||||| Sbjct: 214 tatagtatgattacggatgctgaggagaa 242
>emb|AL844851.4| Human DNA sequence from clone DAQB-335A13 on chromosome 6 Contains the HCP5P15 pseudogene for HLA complex P5 pseudogene 15, the HLA-F gene for major histocompatibility complex, class I, F, the RPL23AP1 pseudogene for ribosomal protein L23a 1, the DAQB-335A13.8 locus for novel transcripts sharing homology with MICE, the MICE pseudogene for MHC class I polypeptide-related sequence E, the HCG9P5 pseudogene for HLA complex group 9 pseudogene 5, the IFITM4P pseudogene for interferon induced transmembrane protein 4, the HCP5P14 pseudogene for HLA complex P5 pseudogene 14, the HCG4 gene for HLA complex group 4, the HCP5P13 pseudogene for HLA complex P5 pseudogene 13, the DAQB-335A13.14 locus for novel transcripts that share homology with HLA-75, the pseudogene HLA-75, the HLA-90 pseudogene, the RPL7AP7 pseudogene for ribosomal protein L7a pseudogene 7, the MICG pseudogene for MHC class I polypeptide-related sequence G, and 4 CpG islands, complete sequence Length = 119030 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcgtcgggcggcgggatgggggagg 109 |||||||| |||||||||||||||| Sbjct: 90912 tcgtcgggtggcgggatgggggagg 90936
>emb|AL671561.7| Human DNA sequence from clone XXbac-209H21 on chromosome 6 contains a HLA (MHC) class 1 pseudogene, a putative novel MHC class 1 (HLA) protein (fragment), a 60S ribosomal protein L7A (RPL7A) pseudogene, a P5-1 pseudogene, the HLA-G gene for histompatibility antigen, class I, G, a major histocompatibility complex, class I, H pseudogene (HLA-H, HLAHP) and five CpG islands, complete sequence Length = 105633 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcgtcgggcggcgggatgggggagg 109 |||||||| |||||||||||||||| Sbjct: 526 tcgtcgggtggcgggatgggggagg 550
>emb|AL669813.6| Human DNA sequence from clone XXbac-231I11 on chromosome 6 contains the 3' end of the gene for myelin oligodendrocyte glycoprotein (MOG), a novel KRAB box-containing C2H2 type zinc finger protein (fragment), a P5-1 pseudogene, the HLA-F gene for major histocompatibility complex, class I, F (HLAF, HLA-5.4, HLA-CDA12), a 60S ribosomal protein L23A (RPL23A) pseudogene, a MHC class 1 polypeptide-related sequence B (MICB) pseudogene, a HCGIX pseudogene, a interferon-induced transmembrane protein 3 (IFITM3, 1-8U) pseudogene and four CpG islands, complete sequence Length = 115133 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcgtcgggcggcgggatgggggagg 109 |||||||| |||||||||||||||| Sbjct: 113659 tcgtcgggtggcgggatgggggagg 113683
>gb|AY096681.1| Arabidopsis thaliana putative cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1210 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgat 272 |||||||| |||||||||||||| ||||| Sbjct: 343 gtcaaggataggattgggtacagtatgat 371
>emb|X81698.1|ATCPACS1 A.thaliana cpACS1 mRNA for cysteine synthase Length = 1420 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgat 272 |||||||| |||||||||||||| ||||| Sbjct: 398 gtcaaggataggattgggtacagtatgat 426
>emb|X80377.2|ATOACLY2 Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.7-4) Length = 1378 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgat 272 |||||||| |||||||||||||| ||||| Sbjct: 355 gtcaaggataggattgggtacagtatgat 383
>gb|AY065375.1| Arabidopsis thaliana cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1489 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgat 272 |||||||| |||||||||||||| ||||| Sbjct: 467 gtcaaggataggattgggtacagtatgat 495
>emb|CR925767.6| Human DNA sequence from clone DAAP-84C21 on chromosome 6, complete sequence Length = 112545 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcgtcgggcggcgggatgggggagg 109 |||||||| |||||||||||||||| Sbjct: 27683 tcgtcgggtggcgggatgggggagg 27707
>gb|AF324490.1|AF324490 Anas platyrhynchos membrane-bound immunoglobulin alpha heavy chain mRNA, partial cds, alternatively spliced Length = 440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cttcgtccacctccagctccg 58 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>emb|BX819476.1|CNS0A9QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgat 272 |||||||| |||||||||||||| ||||| Sbjct: 383 gtcaaggataggattgggtacagtatgat 411
>gb|AY086156.1| Arabidopsis thaliana clone 21866 mRNA, complete sequence Length = 1503 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 gtcaaggacaggattgggtacagcatgat 272 |||||||| |||||||||||||| ||||| Sbjct: 498 gtcaaggataggattgggtacagtatgat 526
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcgtcgggcggcgggatgggggagg 109 |||||||| |||||||||||||||| Sbjct: 2154521 tcgtcgggtggcgggatgggggagg 2154497
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 cgctcgtcgggcggcgggatg 102 ||||||||||||||||||||| Sbjct: 2834767 cgctcgtcgggcggcgggatg 2834787
>emb|AJ314756.1|APL314756 Anas platyrhynchos partial mRNA for immunoglobulin alpha heavy chain (mIgA gene) Length = 440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cttcgtccacctccagctccg 58 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>dbj|AB023058.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:950A3, complete sequence Length = 114450 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcgtcgggcggcgggatgggggagg 109 |||||||| |||||||||||||||| Sbjct: 39154 tcgtcgggtggcgggatgggggagg 39130
>ref|NM_184430.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3038 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 cggccgccacttcgtccacctcca 52 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ggcaagagtgtgctgattga 326 |||||||||||||||||||| Sbjct: 4261410 ggcaagagtgtgctgattga 4261391
>ref|XM_322803.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tgggggaggcttcgacgccg 120 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XM_951732.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tgggggaggcttcgacgccg 120 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XR_003996.1| PREDICTED: Mus musculus similar to ring finger and KH domain containing 2 (LOC672777), mRNA Length = 903 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cttcgtccacctccagctcc 57 |||||||||||||||||||| Sbjct: 208 cttcgtccacctccagctcc 189
>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence Length = 179514 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cttcgtccacctccagctcc 57 |||||||||||||||||||| Sbjct: 99651 cttcgtccacctccagctcc 99632
>gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete sequence Length = 108644 Score = 40.1 bits (20), Expect = 6.7 Identities = 62/76 (81%) Strand = Plus / Minus Query: 310 aagagtgtgctgattgagccaaccaatggcaacacaggcattgggctggccttcatggct 369 |||||||| || ||||| ||||| | ||| || || |||||||| | ||||||||||| Sbjct: 101488 aagagtgtcctcattgaaccaacaagtggtaatactggcattggattagccttcatggca 101429 Query: 370 gctgccaagggttaca 385 || |||||||| |||| Sbjct: 101428 gcggccaagggataca 101413
>ref|XM_502161.1| Yarrowia lipolytica CLIB122, YALI0C22990g predicted mRNA Length = 2532 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 agtccatggagccctgctcc 240 |||||||||||||||||||| Sbjct: 2407 agtccatggagccctgctcc 2388
>gb|AC107980.8| Homo sapiens chromosome 15, clone CTD-3118D7, complete sequence Length = 141868 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcagaggagaaggggttcat 299 |||||||||||||||||||| Sbjct: 41557 gcagaggagaaggggttcat 41576
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 cagcgtcaaggacaggattg 259 |||||||||||||||||||| Sbjct: 4427403 cagcgtcaaggacaggattg 4427422
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tgggggaggcttcgacgccg 120 |||||||||||||||||||| Sbjct: 84472 tgggggaggcttcgacgccg 84453
>emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine synthase (cs1 gene), clone 4T7 Length = 1493 Score = 40.1 bits (20), Expect = 6.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 132 ggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaa 179 ||||||||| ||||| ||||||||||| || |||| || |||||||| Sbjct: 114 ggatgtcacagagcttatcgggaacacccctatggtatatctcaacaa 161
>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete sequence Length = 192919 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 ttttggtgctgagctgatcctcac 467 |||||||||||||||||| ||||| Sbjct: 97648 ttttggtgctgagctgatgctcac 97625
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 aaggggttcatcgtcccaggcaagagtg 316 |||||||||||| ||||||| ||||||| Sbjct: 2005567 aaggggttcatcatcccaggtaagagtg 2005594
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 gctgccaagggttacagacttgta 393 ||||||||||| |||||||||||| Sbjct: 1590152 gctgccaagggatacagacttgta 1590129
>ref|NM_001039214.1| Mus musculus ring finger and KH domain containing 2 (Rkhd2), mRNA Length = 2052 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cttcgtccacctccagctcc 57 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>dbj|AK133686.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330437G16 product:hypothetical Proline-rich region profile/Alanine-rich region profile/Glutamic acid-rich region profile containing protein, full insert sequence Length = 2052 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cttcgtccacctccagctcc 57 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 cggccgccacttcgtccacctcca 52 ||||||||||||||||| |||||| Sbjct: 2982574 cggccgccacttcgtccgcctcca 2982597
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tccacctccagctccgggag 62 |||||||||||||||||||| Sbjct: 4971598 tccacctccagctccgggag 4971617
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cgacgccggcgatcgccagg 132 |||||||||||||||||||| Sbjct: 1596207 cgacgccggcgatcgccagg 1596226
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 cggccgccacttcgtccacctcca 52 ||||||||||||||||| |||||| Sbjct: 64091 cggccgccacttcgtccgcctcca 64114
>dbj|AK099840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C16, full insert sequence Length = 3038 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 cggccgccacttcgtccacctcca 52 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 agtccatggagccctgctcc 240 |||||||||||||||||||| Sbjct: 3085728 agtccatggagccctgctcc 3085747 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,491,732 Number of Sequences: 3902068 Number of extensions: 3491732 Number of successful extensions: 76553 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75496 Number of HSP's gapped (non-prelim): 1043 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
