ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart33h05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G15, full insert sequence Length = 1349 Score = 371 bits (187), Expect = 2e-99 Identities = 400/471 (84%) Strand = Plus / Plus Query: 110 gcggcggtggcggagcgcctggaggcgctgcggaggaagctgggcaagaagcagcacttc 169 |||||||||| | |||| ||| ||||||||||| ||||||||| | ||||||||||||| Sbjct: 244 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 303 Query: 170 gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 229 ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| ||| Sbjct: 304 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 363 Query: 230 gccctccgcgagtcgatgtactctacggtttgccgtgttgcagccgtccttcagactaga 289 ||||||||||| |||||| ||||| ||||||||||| ||| | ||||||||||||||| Sbjct: 364 gccctccgcgatctgatgtattctacagtttgccgtgtggcaactgtccttcagactaga 423 Query: 290 tatacagcatctggattctggcgcgctggtctgaacctcttcgtagcaacagagaagttg 349 ||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||| || Sbjct: 424 tatacagcacctggattctggcgtgctggtctgaacctcttcttaggtacagagaagctg 483 Query: 350 ttaactaatcctgctgaagaggaacgcctcaagacttgcattttgagggcccgggagcat 409 ||||||||||| | ||| |||| | || ||||||| |||| ||||||||||||||||| Sbjct: 484 gtaactaatccttcagaaaaggagcaactgaagactttcattctgagggcccgggagcat 543 Query: 410 cttgatgaaaaagaaaatgaggagtcaatgccaaccaacagacaaccagactctagattc 469 |||||||| ||||| || ||||| || ||||||| |||||| || |||| | ||||| Sbjct: 544 cttgatgagaaagagaacgaggaatccatgccaaacaacagggaaacagatacaagattt 603 Query: 470 ctctttgaaggccaccttaccgtgggacaagaacctcctcctccagcgtggcttgtcgcc 529 || |||||||| || ||||| ||||||| |||||||| ||||| || |||||||| ||| Sbjct: 604 ctttttgaagggcatcttacagtgggacctgaacctccacctcctgcctggcttgttgcc 663 Query: 530 cagaatttaacacgcgaattgaacatcttagcggaaccttctggagatcaa 580 ||||||||| |||| ||| | | ||| ||||| |||||||||||||||||| Sbjct: 664 cagaatttagcacgagaacttagcattttagctgaaccttctggagatcaa 714
>dbj|AK062015.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F05, full insert sequence Length = 1232 Score = 363 bits (183), Expect = 4e-97 Identities = 399/471 (84%) Strand = Plus / Plus Query: 110 gcggcggtggcggagcgcctggaggcgctgcggaggaagctgggcaagaagcagcacttc 169 |||||||||| | |||| ||| ||||||||||| ||||||||| | ||||||||||||| Sbjct: 109 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 168 Query: 170 gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 229 ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| ||| Sbjct: 169 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 228 Query: 230 gccctccgcgagtcgatgtactctacggtttgccgtgttgcagccgtccttcagactaga 289 ||||||||||| |||||| ||||| ||||||||||| ||| | ||||||||||||||| Sbjct: 229 gccctccgcgatctgatgtattctacagtttgccgtgtggcaactgtccttcagactaga 288 Query: 290 tatacagcatctggattctggcgcgctggtctgaacctcttcgtagcaacagagaagttg 349 ||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||| || Sbjct: 289 tatacagcacctggattctggcgtgctggtctgaacctcttcttaggtacagagaagctg 348 Query: 350 ttaactaatcctgctgaagaggaacgcctcaagacttgcattttgagggcccgggagcat 409 ||||||||||| | ||| |||| | || ||||||| |||| ||||||||||||||||| Sbjct: 349 gtaactaatccttcagaaaaggagcaactgaagactttcattctgagggcccgggagcat 408 Query: 410 cttgatgaaaaagaaaatgaggagtcaatgccaaccaacagacaaccagactctagattc 469 |||||||| ||||| || ||||| || ||||||| |||||| || |||| | ||||| Sbjct: 409 cttgatgagaaagagaacgaggaatccatgccaaacaacagggaaacagatacaagattt 468 Query: 470 ctctttgaaggccaccttaccgtgggacaagaacctcctcctccagcgtggcttgtcgcc 529 || |||||||| || ||||| ||||||| ||||| || ||||| || |||||||| ||| Sbjct: 469 ctttttgaagggcatcttacagtgggacctgaacccccacctcctgcctggcttgttgcc 528 Query: 530 cagaatttaacacgcgaattgaacatcttagcggaaccttctggagatcaa 580 ||||||||| |||| ||| | | ||| ||||| |||||||||||||||||| Sbjct: 529 cagaatttagcacgagaacttagcattttagctgaaccttctggagatcaa 579
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Minus Query: 244 gatgtactctacggtttgccgtgttgcagccgtccttcagactagatatacagcatctgg 303 |||||| ||||| ||||||||||| ||| | |||||||||||||||||||||||| |||| Sbjct: 15891832 gatgtattctacagtttgccgtgtggcaactgtccttcagactagatatacagcacctgg 15891773 Query: 304 attctggcgcgctggtctgaacctcttcgtagcaacagagaagttgttaactaatcctgc 363 ||||||||| |||||||||||||||||| ||| ||||||||| || ||||||||||| | Sbjct: 15891772 attctggcgtgctggtctgaacctcttcttaggtacagagaagctggtaactaatccttc 15891713 Query: 364 tgaagaggaacgcctcaagacttgcattttgagggcccgggagcatcttgatgaaaaaga 423 ||| |||| | || ||||||| |||| ||||||||||||||||||||||||| ||||| Sbjct: 15891712 agaaaaggagcaactgaagactttcattctgagggcccgggagcatcttgatgagaaaga 15891653 Query: 424 aaatgaggagtcaatgccaaccaacag 450 || ||||| || ||||||| |||||| Sbjct: 15891652 gaacgaggaatccatgccaaacaacag 15891626 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Minus Query: 110 gcggcggtggcggagcgcctggaggcgctgcggaggaagctgggcaagaagcagcacttc 169 |||||||||| | |||| ||| ||||||||||| ||||||||| | ||||||||||||| Sbjct: 15893024 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 15892965 Query: 170 gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 229 ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| ||| Sbjct: 15892964 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 15892905 Query: 230 gccctccgcga 240 ||||||||||| Sbjct: 15892904 gccctccgcga 15892894 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 464 agattcctctttgaaggccaccttaccgtgggacaagaacctcctcctccagcgtggctt 523 ||||| || |||||||| || ||||| ||||||| |||||||| ||||| || |||||| Sbjct: 15891351 agatttctttttgaagggcatcttacagtgggacctgaacctccacctcctgcctggctt 15891292 Query: 524 gtcgcccagaatttaacacgcgaattgaacatcttagcggaaccttctggagatcaa 580 || |||||||||||| |||| ||| | | ||| ||||| |||||||||||||||||| Sbjct: 15891291 gttgcccagaatttagcacgagaacttagcattttagctgaaccttctggagatcaa 15891235
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Minus Query: 244 gatgtactctacggtttgccgtgttgcagccgtccttcagactagatatacagcatctgg 303 |||||| ||||| ||||||||||| ||| | |||||||||||||||||||||||| |||| Sbjct: 54958 gatgtattctacagtttgccgtgtggcaactgtccttcagactagatatacagcacctgg 54899 Query: 304 attctggcgcgctggtctgaacctcttcgtagcaacagagaagttgttaactaatcctgc 363 ||||||||| |||||||||||||||||| ||| ||||||||| || ||||||||||| | Sbjct: 54898 attctggcgtgctggtctgaacctcttcttaggtacagagaagctggtaactaatccttc 54839 Query: 364 tgaagaggaacgcctcaagacttgcattttgagggcccgggagcatcttgatgaaaaaga 423 ||| |||| | || ||||||| |||| ||||||||||||||||||||||||| ||||| Sbjct: 54838 agaaaaggagcaactgaagactttcattctgagggcccgggagcatcttgatgagaaaga 54779 Query: 424 aaatgaggagtcaatgccaaccaacag 450 || ||||| || ||||||| |||||| Sbjct: 54778 gaacgaggaatccatgccaaacaacag 54752 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Minus Query: 110 gcggcggtggcggagcgcctggaggcgctgcggaggaagctgggcaagaagcagcacttc 169 |||||||||| | |||| ||| ||||||||||| ||||||||| | ||||||||||||| Sbjct: 56150 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 56091 Query: 170 gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 229 ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| ||| Sbjct: 56090 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 56031 Query: 230 gccctccgcga 240 ||||||||||| Sbjct: 56030 gccctccgcga 56020 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 464 agattcctctttgaaggccaccttaccgtgggacaagaacctcctcctccagcgtggctt 523 ||||| || |||||||| || ||||| ||||||| |||||||| ||||| || |||||| Sbjct: 54477 agatttctttttgaagggcatcttacagtgggacctgaacctccacctcctgcctggctt 54418 Query: 524 gtcgcccagaatttaacacgcgaattgaacatcttagcggaaccttctggagatcaa 580 || |||||||||||| |||| ||| | | ||| ||||| |||||||||||||||||| Sbjct: 54417 gttgcccagaatttagcacgagaacttagcattttagctgaaccttctggagatcaa 54361
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 160 gcagcacttcgaggaggccgtcgccgacc 188 ||||||||||||||||||| ||||||||| Sbjct: 2804681 gcagcacttcgaggaggccatcgccgacc 2804709
>ref|XM_480929.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||| ||||||||||||||||||| Sbjct: 69 acggcgggcgacgaggcggcggtggcgg 96
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||| ||||||||||||||||||| Sbjct: 8681066 acggcgggcgacgaggcggcggtggcgg 8681093
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||| ||||||||||||||||||| Sbjct: 24045 acggcgggcgacgaggcggcggtggcgg 24072
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 101 ggggacgaggcggcggtggcggagcgcc 128 |||||||||||||||||||| ||||||| Sbjct: 63524 ggggacgaggcggcggtggccgagcgcc 63497
>ref|XM_468708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 669 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcggtggcgg 122 ||||||| ||||||||||||||||||| Sbjct: 628 cggcgggcgacgaggcggcggtggcgg 602
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcgg 122 ||||||| ||||||||||||||||||| Sbjct: 21978645 cggcgggcgacgaggcggcggtggcgg 21978671 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcgg 122 ||||||| ||||||||||||||||||| Sbjct: 17148143 cggcgggcgacgaggcggcggtggcgg 17148169
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcgg 122 ||||||| ||||||||||||||||||| Sbjct: 39536 cggcgggcgacgaggcggcggtggcgg 39562
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcgg 122 ||||||| ||||||||||||||||||| Sbjct: 21971674 cggcgggcgacgaggcggcggtggcgg 21971700 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcgg 122 ||||||| ||||||||||||||||||| Sbjct: 17141712 cggcgggcgacgaggcggcggtggcgg 17141738
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtg 118 ||||||||||||||||||||||| Sbjct: 9470431 cggcgggggacgaggcggcggtg 9470453 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 5347360 cggcggaggccgaggcggcggtggcggag 5347388 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 acctcaccgccacgctccgcgacc 209 ||||||||||||||||||| |||| Sbjct: 17662231 acctcaccgccacgctccgtgacc 17662208 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||||||||||| ||||| ||||| Sbjct: 9471587 acggcgggggacgaggaggcggcggcgg 9471560
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcggtggcgg 122 ||||||| ||||||||||||||||||| Sbjct: 30371 cggcgggcgacgaggcggcggtggcgg 30345
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtg 118 ||||||||||||||||||||||| Sbjct: 83992 cggcgggggacgaggcggcggtg 84014 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||||||||||| ||||| ||||| Sbjct: 85148 acggcgggggacgaggaggcggcggcgg 85121
>ref|XM_471455.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3303 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 ggcgggggacgaggcggcggtg 118 |||||||||||||||||||||| Sbjct: 156 ggcgggggacgaggcggcggtg 177
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 175 ggccgtcgccgacctcaccgcc 196 |||||||||||||||||||||| Sbjct: 783435 ggccgtcgccgacctcaccgcc 783414
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 ggcgggggacgaggcggcggtg 118 |||||||||||||||||||||| Sbjct: 125845 ggcgggggacgaggcggcggtg 125866 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||||||||||| ||||| ||||| Sbjct: 138483 acggcgggggacgaggaggcggcggcgg 138456
>ref|NM_205404.1| Gallus gallus potassium inwardly-rectifying channel, subfamily J, member 3 (KCNJ3), mRNA Length = 1525 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 ggcgctgcggaggaagctgggc 154 |||||||||||||||||||||| Sbjct: 45 ggcgctgcggaggaagctgggc 66
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 ggcgggggacgaggcggcggtg 118 |||||||||||||||||||||| Sbjct: 11117190 ggcgggggacgaggcggcggtg 11117211 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||||||||||| ||||| ||||| Sbjct: 11129828 acggcgggggacgaggaggcggcggcgg 11129801
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 cggcggtggcggagcgcctgga 132 |||||||||||||||||||||| Sbjct: 3149529 cggcggtggcggagcgcctgga 3149550
>gb|L35555.1|CHKGIRK Gallus gallus GIRK1 mRNA, complete cds Length = 1525 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 ggcgctgcggaggaagctgggc 154 |||||||||||||||||||||| Sbjct: 45 ggcgctgcggaggaagctgggc 66
>ref|XM_475520.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1812 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acgaggcggcggtggcggagc 125 ||||||||||||||||||||| Sbjct: 1382 acgaggcggcggtggcggagc 1402
>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15 mRNA Length = 1000 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 128 cggcggaggccgaggcggcggtggcggag 100
>ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 991 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 117 cggcggaggccgaggcggcggtggcggag 89
>ref|XM_479002.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2944 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gggacgaggcggcggtggcgg 122 ||||||||||||||||||||| Sbjct: 463 gggacgaggcggcggtggcgg 483
>ref|XM_475078.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2535 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ggacgaggcggcggtggcgga 123 ||||||||||||||||||||| Sbjct: 2157 ggacgaggcggcggtggcgga 2177
>gb|AY020219.1| Oryza sativa microsatellite MRG2544 containing (GA)X12, closest to marker R2344, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 204 cggcggaggccgaggcggcggtggcggag 176
>gb|AY019893.1| Oryza sativa microsatellite MRG2218 containing (CT)X12, closest to marker R2344, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 22 cggcggaggccgaggcggcggtggcggag 50
>emb|AJ557073.1|OSA557073 Oryza sativa (japonica cultivar-group) partial mRNA for rid2 protein Length = 846 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acgaggcggcggtggcggagc 125 ||||||||||||||||||||| Sbjct: 416 acgaggcggcggtggcggagc 436
>ref|XM_548160.2| PREDICTED: Canis familiaris similar to GPR158-like 1 (LOC491040), mRNA Length = 7140 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 gctgcggaggaagctgggcaagaag 160 ||||||||||||||||| ||||||| Sbjct: 2379 gctgcggaggaagctggccaagaag 2403
>gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransferase gene, complete cds Length = 3312 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 acggcgggggacgaggcggcggtggcgga 123 ||||||| ||||| ||||||||||||||| Sbjct: 316 acggcggaggacgtggcggcggtggcgga 344
>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full insert sequence Length = 991 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 117 cggcggaggccgaggcggcggtggcggag 89
>gb|DQ298248.1| Chlamydomonas reinhardtii radial spike protein 8 (RSP8) gene, complete cds Length = 2413 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 ggcggcggtggcggagcgcctggaggcgc 137 |||||||| |||||||| ||||||||||| Sbjct: 1184 ggcggcggcggcggagcacctggaggcgc 1212
>gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase mRNA, complete cds Length = 1458 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 acggcgggggacgaggcggcggtggcgga 123 ||||||| ||||| ||||||||||||||| Sbjct: 119 acggcggaggacgtggcggcggtggcgga 147
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gggacgaggcggcggtggcgg 122 ||||||||||||||||||||| Sbjct: 24244557 gggacgaggcggcggtggcgg 24244537
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcgg 116 ||||||||||||||||||||| Sbjct: 26391149 cggcgggggacgaggcggcgg 26391129 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ggacgaggcggcggtggcgg 122 |||||||||||||||||||| Sbjct: 9819635 ggacgaggcggcggtggcgg 9819654
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acgaggcggcggtggcggagc 125 ||||||||||||||||||||| Sbjct: 1184165 acgaggcggcggtggcggagc 1184185 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ggacgaggcggcggtggcgga 123 ||||||||||||||||||||| Sbjct: 684038 ggacgaggcggcggtggcgga 684058
>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164595 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ggcgggggacgaggcggcggt 117 ||||||||||||||||||||| Sbjct: 143250 ggcgggggacgaggcggcggt 143270
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgtcgccgacctcaccgcc 196 ||||||||||||||||||||| Sbjct: 2007093 gccgtcgccgacctcaccgcc 2007073
>gb|AF546141.1| Streptomyces ghanaensis UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10371 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 gtcgccgacctcaccgccacgctcc 203 |||||||||||| |||||||||||| Sbjct: 5587 gtcgccgacctcgccgccacgctcc 5611
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 217916 cggcggcggtcgaggcggcggtggcggag 217944 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cgggggacgaggcggcggtggcgg 122 |||||| ||||||||||||||||| Sbjct: 483189 cgggggccgaggcggcggtggcgg 483166
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 941 cggcggaggccgaggcggcggtggcggag 969
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgtcgccgacctcaccgcc 196 ||||||||||||||||||||| Sbjct: 4639287 gccgtcgccgacctcaccgcc 4639267
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcgg 116 ||||||||||||||||||||| Sbjct: 3188 cggcgggggacgaggcggcgg 3168
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085J13 Length = 130185 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcgg 116 ||||||||||||||||||||| Sbjct: 88876 cggcgggggacgaggcggcgg 88856
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gggacgaggcggcggtggcgg 122 ||||||||||||||||||||| Sbjct: 56108 gggacgaggcggcggtggcgg 56088
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 73663 cggcggaggccgaggcggcggtggcggag 73691
>dbj|AK122094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125C04, full insert sequence Length = 3257 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gggacgaggcggcggtggcgg 122 ||||||||||||||||||||| Sbjct: 461 gggacgaggcggcggtggcgg 481
>dbj|AK106443.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D12, full insert sequence Length = 2781 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ggacgaggcggcggtggcgga 123 ||||||||||||||||||||| Sbjct: 2270 ggacgaggcggcggtggcgga 2290
>dbj|AK101972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076M10, full insert sequence Length = 2262 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acgaggcggcggtggcggagc 125 ||||||||||||||||||||| Sbjct: 1578 acgaggcggcggtggcggagc 1598
>dbj|AK067238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G09, full insert sequence Length = 2945 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gggacgaggcggcggtggcgg 122 ||||||||||||||||||||| Sbjct: 463 gggacgaggcggcggtggcgg 483
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ggccgtcgccgacctcaccgc 195 ||||||||||||||||||||| Sbjct: 2669972 ggccgtcgccgacctcaccgc 2669952
>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full insert sequence Length = 1000 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcggtggcggag 124 |||||| || ||||||||||||||||||| Sbjct: 128 cggcggaggccgaggcggcggtggcggag 100
>dbj|AK063920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B09, full insert sequence Length = 2205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acgaggcggcggtggcggagc 125 ||||||||||||||||||||| Sbjct: 1516 acgaggcggcggtggcggagc 1536
>emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 in linkage group 16, complete sequence Length = 205755 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aacacgcgaattgaacatctt 558 ||||||||||||||||||||| Sbjct: 5290 aacacgcgaattgaacatctt 5270
>gb|AY108279.1| Zea mays PCO119814 mRNA sequence Length = 548 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acgaggcggcggtggcggagc 125 ||||||||||||||||||||| Sbjct: 23 acgaggcggcggtggcggagc 43
>gb|AY609873.1| Sus scrofa clone Clu_37058.scr.msk.p1.Contig2, mRNA sequence Length = 1410 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 cggaggaagctgggcaagaag 160 ||||||||||||||||||||| Sbjct: 1094 cggaggaagctgggcaagaag 1074
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 103 ggacgaggcggcggtggcggagcgcctgg 131 ||||| |||||||||||||||||| |||| Sbjct: 6469 ggacgcggcggcggtggcggagcggctgg 6441
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ggacgaggcggcggtggcgga 123 ||||||||||||||||||||| Sbjct: 29237 ggacgaggcggcggtggcgga 29257
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acgaggcggcggtggcggagc 125 ||||||||||||||||||||| Sbjct: 34451 acgaggcggcggtggcggagc 34471
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ttgatgaaaaagaaaatgag 430 |||||||||||||||||||| Sbjct: 1340093 ttgatgaaaaagaaaatgag 1340112
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 cgcgaccgctacgacggcgcctct 226 ||||||||||||||||||| |||| Sbjct: 375874 cgcgaccgctacgacggcggctct 375897
>ref|XM_465817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2022 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 acctcaccgccacgctccgcgacc 209 ||||||||||||||||||| |||| Sbjct: 334 acctcaccgccacgctccgtgacc 357
>ref|XM_506807.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0021C10.5 mRNA Length = 2047 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 acctcaccgccacgctccgcgacc 209 ||||||||||||||||||| |||| Sbjct: 357 acctcaccgccacgctccgtgacc 380
>ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA Length = 4912 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcg 115 |||||||||||||||||||| Sbjct: 1845 cggcgggggacgaggcggcg 1826
>ref|XM_471458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 993 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||||||||||| ||||| ||||| Sbjct: 38 acggcgggggacgaggaggcggcggcgg 11
>gb|BC044418.1| Danio rerio bromodomain and PHD finger containing, 1, mRNA (cDNA clone MGC:55530 IMAGE:2642092), complete cds Length = 3164 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggcgctgcggaggaagctgg 152 |||||||||||||||||||| Sbjct: 2760 ggcgctgcggaggaagctgg 2779
>gb|BC072668.1| Homo sapiens SRY (sex determining region Y)-box 4, mRNA (cDNA clone MGC:71240 IMAGE:6584346), complete cds Length = 2107 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcg 115 |||||||||||||||||||| Sbjct: 1665 cggcgggggacgaggcggcg 1646
>ref|XM_590437.2| PREDICTED: Bos taurus similar to rho guanine nucleotide exchange factor 5 isoform 1 (LOC512847), mRNA Length = 2381 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggcgctgcggaggaagctg 151 |||||||||||||||||||| Sbjct: 1250 aggcgctgcggaggaagctg 1269
>ref|NM_001039472.1| Mus musculus kinesin family member 21B (Kif21b), mRNA Length = 9119 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaggcgctgcggaggaagc 149 |||||||||||||||||||| Sbjct: 3186 ggaggcgctgcggaggaagc 3205
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gctgcggaggaagctgggca 155 |||||||||||||||||||| Sbjct: 140975 gctgcggaggaagctgggca 140994
>gb|BC116024.1| Bos taurus cDNA clone IMAGE:8092845, containing frame-shift errors Length = 2601 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggcgctgcggaggaagctg 151 |||||||||||||||||||| Sbjct: 1395 aggcgctgcggaggaagctg 1414
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 gtggcggagcgcctggaggcgctg 139 ||||||||||| |||||||||||| Sbjct: 709232 gtggcggagcggctggaggcgctg 709255
>gb|AC124550.4| Mus musculus BAC clone RP23-211F21 from chromosome 1, complete sequence Length = 204588 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaggcgctgcggaggaagc 149 |||||||||||||||||||| Sbjct: 82596 ggaggcgctgcggaggaagc 82615
>ref|XM_547366.2| PREDICTED: Canis familiaris similar to Kinesin family member 21B (LOC490245), mRNA Length = 4413 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaggcgctgcggaggaagc 149 |||||||||||||||||||| Sbjct: 2973 ggaggcgctgcggaggaagc 2992
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gcgaccgctacgacggcgcc 223 |||||||||||||||||||| Sbjct: 1044133 gcgaccgctacgacggcgcc 1044114
>emb|AL136179.15| Human DNA sequence from clone RP3-322L4 on chromosome 6 Contains the SOX4 gene for SRY (sex determining region Y)-box 4, a novel pseudogene and CpG islands, complete sequence Length = 128728 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcg 115 |||||||||||||||||||| Sbjct: 11283 cggcgggggacgaggcggcg 11264
>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome Length = 221454 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cgcctctcccgccctccgcg 239 |||||||||||||||||||| Sbjct: 181475 cgcctctcccgccctccgcg 181456
>emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein Length = 2797 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cggcgggggacgaggcggcg 115 |||||||||||||||||||| Sbjct: 1401 cggcgggggacgaggcggcg 1382
>gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin biosynthesis gene cluster, partial sequence Length = 17455 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgtcgccgacctcaccgcc 196 |||||||||||||||||||| Sbjct: 2439 ccgtcgccgacctcaccgcc 2458
>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome Length = 215678 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cgcctctcccgccctccgcg 239 |||||||||||||||||||| Sbjct: 175693 cgcctctcccgccctccgcg 175674
>emb|BX538261.1|HSM806504 Homo sapiens genomic DNA; cDNA DKFZp686J1844 (from clone DKFZp686J1844) Length = 7326 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 atgaaaaagaaaatgaggag 433 |||||||||||||||||||| Sbjct: 817 atgaaaaagaaaatgaggag 798
>gb|AF474179.1| Rhesus cytomegalovirus US3 protein (US3), US2 protein (US2), and US1 protein (US1) genes, complete cds Length = 7325 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgcctctcccgccctccgcg 239 |||||||||||||||||||| Sbjct: 4757 cgcctctcccgccctccgcg 4776
>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin biosynthetic gene cluster, complete sequence Length = 95700 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 tggcggagcgcctggaggcgctgc 140 ||||| |||||||||||||||||| Sbjct: 51968 tggcgaagcgcctggaggcgctgc 51991
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ggacgaggcggcggtggcgg 122 |||||||||||||||||||| Sbjct: 1028827 ggacgaggcggcggtggcgg 1028808
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||||||||||| ||| ||||||| Sbjct: 28595202 acggcgggggacgaggaggccgtggcgg 28595229
>gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosome 16, complete sequence Length = 177886 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 tgaagaggaacgcctcaagacttg 387 |||||||| ||||||||||||||| Sbjct: 80106 tgaagagggacgcctcaagacttg 80083
>ref|XM_344967.2| PREDICTED: Rattus norvegicus similar to tripartite motif protein 50 (LOC365377), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 ccagcgtggcttgtcgccca 531 |||||||||||||||||||| Sbjct: 1101 ccagcgtggcttgtcgccca 1082
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 95 acggcgggggacgaggcggcggtggcgg 122 |||||||||||||||| ||| ||||||| Sbjct: 121641 acggcgggggacgaggaggccgtggcgg 121668
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 acttcgaggaggccgtcgcc 184 |||||||||||||||||||| Sbjct: 3515488 acttcgaggaggccgtcgcc 3515469
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgtcgccgacctcaccgcc 196 |||||||||||||||||||| Sbjct: 6636313 ccgtcgccgacctcaccgcc 6636332
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ggacgaggcggcggtggcgg 122 |||||||||||||||||||| Sbjct: 109877 ggacgaggcggcggtggcgg 109896
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ggacgaggcggcggtggcgg 122 |||||||||||||||||||| Sbjct: 16270 ggacgaggcggcggtggcgg 16289
>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0021C10 Length = 119527 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 acctcaccgccacgctccgcgacc 209 ||||||||||||||||||| |||| Sbjct: 18245 acctcaccgccacgctccgtgacc 18222
>dbj|AK102664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101K22, full insert sequence Length = 2023 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 acctcaccgccacgctccgcgacc 209 ||||||||||||||||||| |||| Sbjct: 335 acctcaccgccacgctccgtgacc 358
>gb|AF202893.1|AF202893 Mus musculus Kif21b (Kif21b) mRNA, complete cds Length = 5420 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaggcgctgcggaggaagc 149 |||||||||||||||||||| Sbjct: 3164 ggaggcgctgcggaggaagc 3183
>gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain protein SMRTER (Smrter) mRNA, complete cds Length = 11296 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 gcggcggtggcggagcgcctggag 133 |||| ||||||||||||||||||| Sbjct: 9854 gcggtggtggcggagcgcctggag 9877
>dbj|AK069572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023H24, full insert sequence Length = 2047 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 acctcaccgccacgctccgcgacc 209 ||||||||||||||||||| |||| Sbjct: 357 acctcaccgccacgctccgtgacc 380
>dbj|AK067409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102H16, full insert sequence Length = 3780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ggacgaggcggcggtggcgg 122 |||||||||||||||||||| Sbjct: 241 ggacgaggcggcggtggcgg 222
>ref|NM_201016.1| Danio rerio bromodomain and PHD finger containing, 1 (brpf1), mRNA Length = 3164 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggcgctgcggaggaagctgg 152 |||||||||||||||||||| Sbjct: 2760 ggcgctgcggaggaagctgg 2779
>emb|Z69244.1|BTCYP19X4 Bos taurus partial cyp19 gene, exon 4 Length = 819 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 acaagaacctcctcctccag 515 |||||||||||||||||||| Sbjct: 421 acaagaacctcctcctccag 402
>gb|AC100967.15| Mus musculus chromosome 5, clone RP23-74L20, complete sequence Length = 229660 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaagctgggcaagaagcag 163 |||||||||||||||||||| Sbjct: 87924 ggaagctgggcaagaagcag 87943
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 aggccgtcgccgacctcacc 193 |||||||||||||||||||| Sbjct: 4025169 aggccgtcgccgacctcacc 4025150
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 acgaggcggcggtggcggagcgcctgga 132 ||||| |||| ||||||||||||||||| Sbjct: 94107 acgagacggccgtggcggagcgcctgga 94080
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ttgatgaaaaagaaaatgag 430 |||||||||||||||||||| Sbjct: 1332448 ttgatgaaaaagaaaatgag 1332467
>emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chromosome 11, complete sequence Length = 228391 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tctttgaaggccaccttacc 490 |||||||||||||||||||| Sbjct: 106336 tctttgaaggccaccttacc 106317 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,478,007 Number of Sequences: 3902068 Number of extensions: 5478007 Number of successful extensions: 122182 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119088 Number of HSP's gapped (non-prelim): 3094 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
